Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:43:15 (24363): wrapper (7.7.26015): starting
16:43:15 (24363): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 16:43:15] Arguments: --nthreads 8
[2025-11-26 16:43:15] Threads: 8
[2025-11-26 16:43:15] Checking for CVMFS
[2025-11-26 16:43:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 16:43:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 16:43:16] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 16:43:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 16:43:17] 2.11.2.0 13500 285515 142844 153326 2 130 17464865 25165824 1338 130560 14 131867986 99.866 83855446 2897 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-26 16:43:17] CVMFS is ok
[2025-11-26 16:43:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 16:43:17] Checking for apptainer binary...
[2025-11-26 16:43:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 16:43:17] Running /usr/bin/apptainer --version
[2025-11-26 16:43:17] apptainer version 1.3.2-1.el7
[2025-11-26 16:43:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 16:43:26] cg-vwn363.simple-grid.lan
[2025-11-26 16:43:26] apptainer works
[2025-11-26 16:43:27] Set ATHENA_PROC_NUMBER=8
[2025-11-26 16:43:27] Set ATHENA_CORE_NUMBER=8
[2025-11-26 16:43:27] Starting ATLAS job with PandaID=6895360352
[2025-11-26 16:43:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 15:43:22]  *** The last 200 lines of the pilot log: ***
[2025-11-27 15:43:22] 2025-11-27 14:42:34,201 | INFO     | monitor loop #5556: job 0:6895360352 is in state 'finished'
[2025-11-27 15:43:22] 2025-11-27 14:42:34,201 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 15:43:22] 2025-11-27 14:42:34,942 | INFO     | time since job start (82507s) is within the limit (172800.0s)
[2025-11-27 15:43:22] 2025-11-27 14:42:36,706 | INFO     | monitor loop #5557: job 0:6895360352 is in state 'finished'
[2025-11-27 15:43:22] 2025-11-27 14:42:36,706 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 15:43:22] 2025-11-27 14:42:36,953 | INFO     | time since job start (82509s) is within the limit (172800.0s)
[2025-11-27 15:43:22] 2025-11-27 14:42:38,959 | INFO     | time since job start (82511s) is within the limit (172800.0s)
[2025-11-27 15:43:22] 2025-11-27 14:42:39,211 | INFO     | monitor loop #5558: job 0:6895360352 is in state 'finished'
[2025-11-27 15:43:22] 2025-11-27 14:42:39,211 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 15:43:22] 2025-11-27 14:42:40,968 | INFO     | time since job start (82513s) is within the limit (172800.0s)
[2025-11-27 15:43:22] 2025-11-27 14:42:41,716 | INFO     | monitor loop #5559: job 0:6895360352 is in state 'finished'
[2025-11-27 15:43:22] 2025-11-27 14:42:41,716 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 15:43:22] 2025-11-27 14:42:42,976 | INFO     | time since job start (82515s) is within the limit (172800.0s)
[2025-11-27 15:43:22] 2025-11-27 14:42:44,221 | INFO     | monitor loop #5560: job 0:6895360352 is in state 'finished'
[2025-11-27 15:43:22] 2025-11-27 14:42:44,221 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 15:43:22] 2025-11-27 14:42:44,598 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 15:43:22] 2025-11-27 14:42:44,601 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-27 15:43:22] 2025-11-27 14:42:44,603 | INFO     | using path: /var/lib/boinc/slots/9/PanDA_Pilot-6895360352/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 15:43:22] 2025-11-27 14:42:44,604 | INFO     | extracted standard info from prmon json
[2025-11-27 15:43:22] 2025-11-27 14:42:44,604 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 15:43:22] 2025-11-27 14:42:44,604 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 15:43:22] 2025-11-27 14:42:44,635 | INFO     | fitting pss+swap vs Time
[2025-11-27 15:43:22] 2025-11-27 14:42:44,637 | INFO     | sum of square deviations: 751114165384.7904
[2025-11-27 15:43:22] 2025-11-27 14:42:44,691 | INFO     | sum of deviations: 3147666730460.7407
[2025-11-27 15:43:22] 2025-11-27 14:42:44,691 | INFO     | mean x: 1764213502.0781832
[2025-11-27 15:43:22] 2025-11-27 14:42:44,692 | INFO     | mean y: 2842194.878629933
[2025-11-27 15:43:22] 2025-11-27 14:42:44,692 | INFO     | intersect: -7390382965.608505
[2025-11-27 15:43:22] 2025-11-27 14:42:44,693 | INFO     | chi2: 19.096921536262304
[2025-11-27 15:43:22] 2025-11-27 14:42:44,695 | INFO     | sum of square deviations: 742756580541.4562
[2025-11-27 15:43:22] 2025-11-27 14:42:44,765 | INFO     | sum of deviations: 3588697023745.9014
[2025-11-27 15:43:22] 2025-11-27 14:42:44,766 | INFO     | mean x: 1764213349.5822122
[2025-11-27 15:43:22] 2025-11-27 14:42:44,766 | INFO     | mean y: 2850241.214499253
[2025-11-27 15:43:22] 2025-11-27 14:42:44,766 | INFO     | intersect: -8521109509.210225
[2025-11-27 15:43:22] 2025-11-27 14:42:44,768 | INFO     | chi2: 15.939368716330492
[2025-11-27 15:43:22] 2025-11-27 14:42:44,768 | INFO     | current chi2=15.939368716330492 (change=16.534355099779166 %)
[2025-11-27 15:43:22] 2025-11-27 14:42:44,768 | INFO     | right removable region: 1337
[2025-11-27 15:43:22] 2025-11-27 14:42:44,770 | INFO     | sum of square deviations: 742755697261.4565
[2025-11-27 15:43:22] 2025-11-27 14:42:44,833 | INFO     | sum of deviations: 2589581398721.2573
[2025-11-27 15:43:22] 2025-11-27 14:42:44,833 | INFO     | mean x: 1764213654.5822122
[2025-11-27 15:43:22] 2025-11-27 14:42:44,834 | INFO     | mean y: 2852376.447683109
[2025-11-27 15:43:22] 2025-11-27 14:42:44,834 | INFO     | intersect: -6147992215.011529
[2025-11-27 15:43:22] 2025-11-27 14:42:44,835 | INFO     | chi2: 14.506686156803395
[2025-11-27 15:43:22] 2025-11-27 14:42:44,836 | INFO     | current chi2=14.506686156803395 (change=24.036520078603836 %)
[2025-11-27 15:43:22] 2025-11-27 14:42:44,836 | INFO     | left removable region: 10
[2025-11-27 15:43:22] 2025-11-27 14:42:44,838 | INFO     | sum of square deviations: 724586862589.9669
[2025-11-27 15:43:22] 2025-11-27 14:42:44,886 | INFO     | sum of deviations: 2673713103420.314
[2025-11-27 15:43:22] 2025-11-27 14:42:44,886 | INFO     | mean x: 1764213624.0911832
[2025-11-27 15:43:22] 2025-11-27 14:42:44,886 | INFO     | mean y: 2870762.881688018
[2025-11-27 15:43:22] 2025-11-27 14:42:44,886 | INFO     | intersect: -6507047271.106348
[2025-11-27 15:43:22] 2025-11-27 14:42:44,888 | INFO     | chi2: 7.595831839254337
[2025-11-27 15:43:22] 2025-11-27 14:42:44,888 | INFO     | current memory leak: 3.69 B/s (using 1327 data points, chi2=7.60)
[2025-11-27 15:43:22] 2025-11-27 14:42:44,890 | INFO     | could have reported an average CPU frequency of 1999 MHz (46 samples)
[2025-11-27 15:43:22] 2025-11-27 14:42:44,890 | INFO     | ..............................
[2025-11-27 15:43:22] 2025-11-27 14:42:44,890 | INFO     | . Timing measurements:
[2025-11-27 15:43:22] 2025-11-27 14:42:44,890 | INFO     | . get job = 0 s
[2025-11-27 15:43:22] 2025-11-27 14:42:44,890 | INFO     | . initial setup = 20 s
[2025-11-27 15:43:22] 2025-11-27 14:42:44,890 | INFO     | . payload setup = 166 s
[2025-11-27 15:43:22] 2025-11-27 14:42:44,890 | INFO     | . stage-in = 0 s
[2025-11-27 15:43:22] 2025-11-27 14:42:44,890 | INFO     | . payload execution = 82042 s
[2025-11-27 15:43:22] 2025-11-27 14:42:44,890 | INFO     | . stage-out = 4 s
[2025-11-27 15:43:22] 2025-11-27 14:42:44,891 | INFO     | . log creation = 2 s
[2025-11-27 15:43:22] 2025-11-27 14:42:44,891 | INFO     | ..............................
[2025-11-27 15:43:22] 2025-11-27 14:42:44,983 | INFO     | time since job start (82517s) is within the limit (172800.0s)
[2025-11-27 15:43:22] 2025-11-27 14:42:45,048 | INFO     | 
[2025-11-27 15:43:22] 2025-11-27 14:42:45,048 | INFO     | job summary report
[2025-11-27 15:43:22] 2025-11-27 14:42:45,048 | INFO     | --------------------------------------------------
[2025-11-27 15:43:22] 2025-11-27 14:42:45,048 | INFO     | PanDA job id: 6895360352
[2025-11-27 15:43:22] 2025-11-27 14:42:45,049 | INFO     | task id: 47556137
[2025-11-27 15:43:22] 2025-11-27 14:42:45,049 | INFO     | errors: (none)
[2025-11-27 15:43:22] 2025-11-27 14:42:45,049 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 15:43:22] 2025-11-27 14:42:45,049 | INFO     | pilot state: finished 
[2025-11-27 15:43:22] 2025-11-27 14:42:45,049 | INFO     | transexitcode: 0
[2025-11-27 15:43:22] 2025-11-27 14:42:45,049 | INFO     | exeerrorcode: 0
[2025-11-27 15:43:22] 2025-11-27 14:42:45,049 | INFO     | exeerrordiag: 
[2025-11-27 15:43:22] 2025-11-27 14:42:45,049 | INFO     | exitcode: 0
[2025-11-27 15:43:22] 2025-11-27 14:42:45,049 | INFO     | exitmsg: OK
[2025-11-27 15:43:22] 2025-11-27 14:42:45,049 | INFO     | cpuconsumptiontime: 310555 s
[2025-11-27 15:43:22] 2025-11-27 14:42:45,049 | INFO     | nevents: 1000
[2025-11-27 15:43:22] 2025-11-27 14:42:45,050 | INFO     | neventsw: 0
[2025-11-27 15:43:22] 2025-11-27 14:42:45,050 | INFO     | pid: 2389
[2025-11-27 15:43:22] 2025-11-27 14:42:45,050 | INFO     | pgrp: 2389
[2025-11-27 15:43:22] 2025-11-27 14:42:45,050 | INFO     | corecount: 8
[2025-11-27 15:43:22] 2025-11-27 14:42:45,050 | INFO     | event service: False
[2025-11-27 15:43:22] 2025-11-27 14:42:45,050 | INFO     | sizes: {0: 2284137, 1: 2284336, 12: 2284336, 23: 2284364, 33: 2284392, 44: 2284448, 55: 2284604, 66: 2284632, 77: 2284660, 87: 2284716, 98: 2284744, 101: 2285314, 
[2025-11-27 15:43:22] 2025-11-27 14:42:45,050 | INFO     | --------------------------------------------------
[2025-11-27 15:43:22] 2025-11-27 14:42:45,050 | INFO     | 
[2025-11-27 15:43:22] 2025-11-27 14:42:45,050 | INFO     | executing command: ls -lF /var/lib/boinc/slots/9
[2025-11-27 15:43:22] 2025-11-27 14:42:45,442 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 15:43:22] 2025-11-27 14:42:45,442 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 15:43:22] 2025-11-27 14:42:45,442 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 15:43:22] 2025-11-27 14:42:45,442 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 15:43:22] 2025-11-27 14:42:45,442 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 15:43:22] 2025-11-27 14:42:45,443 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 15:43:22] 2025-11-27 14:42:45,443 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 15:43:22] 2025-11-27 14:42:45,443 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 15:43:22] 2025-11-27 14:42:45,443 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 15:43:22] 2025-11-27 14:42:45,443 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 15:43:22] 2025-11-27 14:42:45,443 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 15:43:22] 2025-11-27 14:42:45,443 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 15:43:22] 2025-11-27 14:42:45,443 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 15:43:22] 2025-11-27 14:42:45,443 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 15:43:22] 2025-11-27 14:42:45,444 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 15:43:22] 2025-11-27 14:42:45,444 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 15:43:22] 2025-11-27 14:42:45,444 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 15:43:22] 2025-11-27 14:42:45,444 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 15:43:22] 2025-11-27 14:42:45,444 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 15:43:22] 2025-11-27 14:42:45,444 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 15:43:22] 2025-11-27 14:42:45,444 | INFO     | job 6895360352 has completed (purged errors)
[2025-11-27 15:43:22] 2025-11-27 14:42:45,444 | INFO     | overall cleanup function is called
[2025-11-27 15:43:22] 2025-11-27 14:42:46,462 | INFO     | --- collectZombieJob: --- 10, [2389]
[2025-11-27 15:43:22] 2025-11-27 14:42:46,462 | INFO     | zombie collector waiting for pid 2389
[2025-11-27 15:43:22] 2025-11-27 14:42:46,462 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 15:43:22] 2025-11-27 14:42:46,462 | INFO     | collected zombie processes
[2025-11-27 15:43:22] 2025-11-27 14:42:46,463 | INFO     | will attempt to kill all subprocesses of pid=2389
[2025-11-27 15:43:22] 2025-11-27 14:42:46,593 | INFO     | process IDs to be killed: [2389] (in reverse order)
[2025-11-27 15:43:22] 2025-11-27 14:42:47,010 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 15:43:22] 2025-11-27 14:42:47,010 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 15:43:22] 2025-11-27 14:42:47,013 | INFO     | did not find any defunct processes belonging to 2389
[2025-11-27 15:43:22] 2025-11-27 14:42:47,015 | INFO     | did not find any defunct processes belonging to 2389
[2025-11-27 15:43:22] 2025-11-27 14:42:47,031 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 15:43:22] 2025-11-27 14:42:47,032 | INFO     | ready for new job
[2025-11-27 15:43:22] 2025-11-27 14:42:47,032 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 15:43:22] 2025-11-27 14:42:47,036 | INFO     | ***************************************
[2025-11-27 15:43:22] 2025-11-27 14:42:47,037 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 15:43:22] 2025-11-27 14:42:47,037 | INFO     | ***************************************
[2025-11-27 15:43:22] 2025-11-27 14:42:47,037 | INFO     | 
[2025-11-27 15:43:22] 2025-11-27 14:42:47,037 | INFO     | pilot is running in a VM
[2025-11-27 15:43:22] 2025-11-27 14:42:47,037 | INFO     | architecture information:
[2025-11-27 15:43:22] 2025-11-27 14:42:47,038 | INFO     | executing command: cat /etc/os-release
[2025-11-27 15:43:22] 2025-11-27 14:42:47,232 | INFO     | cat /etc/os-release:
[2025-11-27 15:43:22] NAME="CentOS Linux"
[2025-11-27 15:43:22] VERSION="7 (Core)"
[2025-11-27 15:43:22] ID="centos"
[2025-11-27 15:43:22] ID_LIKE="rhel fedora"
[2025-11-27 15:43:22] VERSION_ID="7"
[2025-11-27 15:43:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 15:43:22] ANSI_COLOR="0;31"
[2025-11-27 15:43:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 15:43:22] HOME_URL="https://www.centos.org/"
[2025-11-27 15:43:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 15:43:22] 
[2025-11-27 15:43:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 15:43:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 15:43:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 15:43:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 15:43:22] 
[2025-11-27 15:43:22] 2025-11-27 14:42:47,233 | INFO     | ***************************************
[2025-11-27 15:43:22] 2025-11-27 14:42:47,736 | INFO     | executing command: df -mP /var/lib/boinc/slots/9
[2025-11-27 15:43:22] 2025-11-27 14:42:47,980 | INFO     | sufficient remaining disk space (495430139904 B)
[2025-11-27 15:43:22] 2025-11-27 14:42:47,980 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 15:43:22] 2025-11-27 14:42:47,980 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 15:43:22] 2025-11-27 14:42:47,980 | INFO     | update_server=False
[2025-11-27 15:43:22] 2025-11-27 14:42:47,980 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 15:43:22] 2025-11-27 14:42:47,983 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 15:43:22] 2025-11-27 14:42:47,983 | INFO     | aborting loop
[2025-11-27 15:43:22] 2025-11-27 14:42:48,248 | INFO     | all job control threads have been joined
[2025-11-27 15:43:22] 2025-11-27 14:42:48,689 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 15:43:22] 2025-11-27 14:42:48,771 | INFO     | all data control threads have been joined
[2025-11-27 15:43:22] 2025-11-27 14:42:48,986 | INFO     | [job] retrieve thread has finished
[2025-11-27 15:43:22] 2025-11-27 14:42:48,989 | INFO     | [job] job monitor thread has finished
[2025-11-27 15:43:22] 2025-11-27 14:42:48,990 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 15:43:22] 2025-11-27 14:42:48,991 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 15:43:22] 2025-11-27 14:42:49,041 | INFO     | all payload control threads have been joined
[2025-11-27 15:43:22] 2025-11-27 14:42:49,070 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 15:43:22] 2025-11-27 14:42:49,197 | INFO     | [job] validate thread has finished
[2025-11-27 15:43:22] 2025-11-27 14:42:49,253 | INFO     | [job] control thread has finished
[2025-11-27 15:43:22] 2025-11-27 14:42:49,378 | INFO     | [data] copytool_in thread has finished
[2025-11-27 15:43:22] 2025-11-27 14:42:49,422 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 15:43:22] 2025-11-27 14:42:49,777 | INFO     | [data] control thread has finished
[2025-11-27 15:43:22] 2025-11-27 14:42:49,827 | INFO     | [payload] failed_post thread has finished
[2025-11-27 15:43:22] 2025-11-27 14:42:50,030 | INFO     | [payload] validate_post thread has finished
[2025-11-27 15:43:22] 2025-11-27 14:42:50,047 | INFO     | [payload] control thread has finished
[2025-11-27 15:43:22] 2025-11-27 14:42:50,064 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 15:43:22] 2025-11-27 14:42:50,696 | INFO     | [data] copytool_out thread has finished
[2025-11-27 15:43:22] 2025-11-27 14:42:51,069 | INFO     | [job] queue monitor thread has finished
[2025-11-27 15:43:22] 2025-11-27 14:42:51,230 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 15:43:22] 2025-11-27 14:42:51,437 | INFO     | [monitor] cgroup control has ended
[2025-11-27 15:43:22] 2025-11-27 14:42:55,238 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 15:43:22] 2025-11-27 14:42:56,762 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139919327442752)>', '<ExcThread(monitor, started 139918760212224)>']
[2025-11-27 15:43:22] 2025-11-27 14:43:01,788 | INFO     | all workflow threads have been joined
[2025-11-27 15:43:22] 2025-11-27 14:43:01,788 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 15:43:22] 2025-11-27 14:43:01,788 | INFO     | traces error code: 0
[2025-11-27 15:43:22] 2025-11-27 14:43:01,789 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 15:43:22] 2025-11-27 14:43:18,183 | INFO     | PID=28142 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-27 15:43:22] 2025-11-27 14:43:18,183 | INFO     | .. there are 9 such processes running
[2025-11-27 15:43:22] 2025-11-27 14:43:18,184 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 15:43:22] 2025-11-27 14:43:18,184 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 15:43:22] 2025-11-27 14:43:18,184 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 15:43:22] 2025-11-27 14:43:18,184 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 15:43:22] 2025-11-27 14:43:18,185 | INFO     | [monitor] control thread has ended
[2025-11-27 15:43:22] 2025-11-27 14:43:18,559 [wrapper] ==== pilot stdout END ====
[2025-11-27 15:43:22] 2025-11-27 14:43:18,639 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 15:43:22] 2025-11-27 14:43:18,727 [wrapper] pilotpid: 28142
[2025-11-27 15:43:22] 2025-11-27 14:43:18,826 [wrapper] Pilot exit status: 0
[2025-11-27 15:43:22] 2025-11-27 14:43:19,102 [wrapper] pandaids: 6895360352
[2025-11-27 15:43:22] 2025-11-27 14:43:19,458 [wrapper] cleanup supervisor_pilot  2440 28143
[2025-11-27 15:43:22] 2025-11-27 14:43:19,469 [wrapper] Test setup, not cleaning
[2025-11-27 15:43:22] 2025-11-27 14:43:19,562 [wrapper] apfmon messages muted
[2025-11-27 15:43:22] 2025-11-27 14:43:19,698 [wrapper] ==== wrapper stdout END ====
[2025-11-27 15:43:22] 2025-11-27 14:43:19,790 [wrapper] ==== wrapper stderr END ====
[2025-11-27 15:43:22]  *** Error codes and diagnostics ***
[2025-11-27 15:43:22]     "exeErrorCode": 0,
[2025-11-27 15:43:22]     "exeErrorDiag": "",
[2025-11-27 15:43:22]     "pilotErrorCode": 0,
[2025-11-27 15:43:22]     "pilotErrorDiag": "",
[2025-11-27 15:43:22]  *** Listing of results directory ***
[2025-11-27 15:43:22] total 1324384
[2025-11-27 15:43:22] -rwx------. 1 boinc boinc     36292 Nov 23 14:42 runpilot2-wrapper.sh
[2025-11-27 15:43:22] -rw-r--r--. 1 boinc boinc      5112 Nov 23 14:42 queuedata.json
[2025-11-27 15:43:22] -rw-r--r--. 1 boinc boinc    576529 Nov 23 14:42 pilot3.tar.gz
[2025-11-27 15:43:22] -rw-r--r--. 1 boinc boinc       100 Nov 26 16:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 15:43:22] -rwxr-xr-x. 1 boinc boinc      7986 Nov 26 16:43 run_atlas
[2025-11-27 15:43:22] -rw-r--r--. 1 boinc boinc       105 Nov 26 16:43 job.xml
[2025-11-27 15:43:22] -rw-r--r--. 1 boinc boinc      6392 Nov 26 16:43 init_data.xml
[2025-11-27 15:43:22] -rw-r--r--. 2 boinc boinc 412457679 Nov 26 16:43 EVNT.47483658._000752.pool.root.1
[2025-11-27 15:43:22] -rw-r--r--. 2 boinc boinc     15847 Nov 26 16:43 start_atlas.sh
[2025-11-27 15:43:22] drwxrwx--x. 2 boinc boinc        68 Nov 26 16:43 shared
[2025-11-27 15:43:22] -rw-r--r--. 2 boinc boinc    590094 Nov 26 16:43 input.tar.gz
[2025-11-27 15:43:22] -rw-r--r--. 1 boinc boinc         0 Nov 26 16:43 boinc_lockfile
[2025-11-27 15:43:22] -rw-r--r--. 1 boinc boinc      2782 Nov 26 16:43 pandaJob.out
[2025-11-27 15:43:22] -rw-------. 1 boinc boinc    991855 Nov 26 16:47 agis_schedconf.cvmfs.json
[2025-11-27 15:43:22] drwx------. 5 boinc boinc      4096 Nov 26 16:47 pilot3
[2025-11-27 15:43:22] -rw-r--r--. 1 boinc boinc       533 Nov 27 15:23 boinc_task_state.xml
[2025-11-27 15:43:22] -rw-------. 1 boinc boinc 913020887 Nov 27 15:39 HITS.47556137._007471.pool.root.1
[2025-11-27 15:43:22] -rw-------. 1 boinc boinc      1028 Nov 27 15:41 memory_monitor_summary.json
[2025-11-27 15:43:22] -rw-------. 1 boinc boinc   1516240 Nov 27 15:41 agis_ddmendpoints.agis.ALL.json
[2025-11-27 15:43:22] -rw-------. 1 boinc boinc   2434482 Nov 27 15:41 log.47556137._007471.job.log.tgz.1
[2025-11-27 15:43:22] -rw-------. 1 boinc boinc      8627 Nov 27 15:42 heartbeat.json
[2025-11-27 15:43:22] -rw-r--r--. 1 boinc boinc      8192 Nov 27 15:43 boinc_mmap_file
[2025-11-27 15:43:22] -rw-------. 1 boinc boinc       820 Nov 27 15:43 pilotlog.txt
[2025-11-27 15:43:22] -rw-------. 1 boinc boinc        95 Nov 27 15:43 pilot_heartbeat.json
[2025-11-27 15:43:22] -rw-r--r--. 1 boinc boinc        29 Nov 27 15:43 wrapper_checkpoint.txt
[2025-11-27 15:43:22] -rw-------. 1 boinc boinc  10963739 Nov 27 15:43 log.47556137._007471.job.log.1
[2025-11-27 15:43:22] -rw-------. 1 boinc boinc       353 Nov 27 15:43 output.list
[2025-11-27 15:43:22] -rw-r--r--. 1 boinc boinc       620 Nov 27 15:43 runtime_log
[2025-11-27 15:43:22] -rw-------. 1 boinc boinc  13414400 Nov 27 15:43 result.tar.gz
[2025-11-27 15:43:22] -rw-r--r--. 1 boinc boinc      8817 Nov 27 15:43 runtime_log.err
[2025-11-27 15:43:22] -rw-------. 1 boinc boinc       662 Nov 27 15:43 IKjNDmgXPh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmSwKKDmIIvncn.diag
[2025-11-27 15:43:22] -rw-r--r--. 1 boinc boinc     21436 Nov 27 15:43 stderr.txt
[2025-11-27 15:43:22] HITS file was successfully produced:
[2025-11-27 15:43:22] -rw-------. 1 boinc boinc 913020887 Nov 27 15:39 shared/HITS.pool.root.1
[2025-11-27 15:43:22]  *** Contents of shared directory: ***
[2025-11-27 15:43:22] total 1308112
[2025-11-27 15:43:22] -rw-r--r--. 2 boinc boinc 412457679 Nov 26 16:43 ATLAS.root_0
[2025-11-27 15:43:22] -rw-r--r--. 2 boinc boinc     15847 Nov 26 16:43 start_atlas.sh
[2025-11-27 15:43:22] -rw-r--r--. 2 boinc boinc    590094 Nov 26 16:43 input.tar.gz
[2025-11-27 15:43:22] -rw-------. 1 boinc boinc 913020887 Nov 27 15:39 HITS.pool.root.1
[2025-11-27 15:43:22] -rw-------. 1 boinc boinc  13414400 Nov 27 15:43 result.tar.gz
15:43:24 (24363): run_atlas exited; CPU time 311126.759438
15:43:24 (24363): called boinc_finish(0)

</stderr_txt>
]]>

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