Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
04:37:17 (30568): wrapper (7.7.26015): starting
04:37:17 (30568): wrapper: running run_atlas (--nthreads 8)
[2025-11-24 04:37:17] Arguments: --nthreads 8
[2025-11-24 04:37:17] Threads: 8
[2025-11-24 04:37:17] Checking for CVMFS
[2025-11-24 04:37:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 04:37:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 04:37:17] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 04:37:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 04:37:17] 2.11.2.0 28294 114646 141380 153240 0 82 11866890 18432000 1885 130560 0 81105754 99.972 4840932 29830 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-24 04:37:17] CVMFS is ok
[2025-11-24 04:37:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 04:37:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 04:37:17] Further information can be found at the LHC@home message board.
[2025-11-24 04:37:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 04:37:17] Checking for apptainer binary...
[2025-11-24 04:37:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 04:37:17] Running /usr/bin/apptainer --version
[2025-11-24 04:37:18] apptainer version 1.3.2-1.el7
[2025-11-24 04:37:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 04:37:18] c-206-25.aglt2.org
[2025-11-24 04:37:18] apptainer works
[2025-11-24 04:37:18] Set ATHENA_PROC_NUMBER=8
[2025-11-24 04:37:18] Set ATHENA_CORE_NUMBER=8
[2025-11-24 04:37:18] Starting ATLAS job with PandaID=6895360792
[2025-11-24 04:37:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 23:49:43]  *** The last 200 lines of the pilot log: ***
[2025-11-24 23:49:43] 2025-11-25 04:49:08,579 | INFO     | monitor loop #4947: job 0:6895360792 is in state 'finished'
[2025-11-24 23:49:43] 2025-11-25 04:49:08,579 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 23:49:43] 2025-11-25 04:49:09,866 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-24 23:49:43] 2025-11-25 04:49:09,873 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2422.4166666666665
[2025-11-24 23:49:43] 2025-11-25 04:49:09,877 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6895360792/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 23:49:43] 2025-11-25 04:49:09,878 | INFO     | extracted standard info from prmon json
[2025-11-24 23:49:43] 2025-11-25 04:49:09,878 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 23:49:43] 2025-11-25 04:49:09,878 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 23:49:43] 2025-11-25 04:49:09,894 | INFO     | fitting pss+swap vs Time
[2025-11-24 23:49:43] 2025-11-25 04:49:09,895 | INFO     | sum of square deviations: 450992868097.27106
[2025-11-24 23:49:43] 2025-11-25 04:49:09,924 | INFO     | sum of deviations: 1971622382981.455
[2025-11-24 23:49:43] 2025-11-25 04:49:09,925 | INFO     | mean x: 1764011601.6028244
[2025-11-24 23:49:43] 2025-11-25 04:49:09,925 | INFO     | mean y: 2867152.5454545454
[2025-11-24 23:49:43] 2025-11-25 04:49:09,925 | INFO     | intersect: -7708928318.262211
[2025-11-24 23:49:43] 2025-11-25 04:49:09,926 | INFO     | chi2: 5.807321384590158
[2025-11-24 23:49:43] 2025-11-25 04:49:09,927 | INFO     | sum of square deviations: 445048630070.4468
[2025-11-24 23:49:43] 2025-11-25 04:49:09,949 | INFO     | sum of deviations: 2323337320054.9346
[2025-11-24 23:49:43] 2025-11-25 04:49:09,950 | INFO     | mean x: 1764011449.1054964
[2025-11-24 23:49:43] 2025-11-25 04:49:09,950 | INFO     | mean y: 2876171.2526595746
[2025-11-24 23:49:43] 2025-11-25 04:49:09,950 | INFO     | intersect: -9205990805.963406
[2025-11-24 23:49:43] 2025-11-25 04:49:09,951 | INFO     | chi2: 2.92938809835917
[2025-11-24 23:49:43] 2025-11-25 04:49:09,951 | INFO     | current chi2=2.92938809835917 (change=49.556983256818555 %)
[2025-11-24 23:49:43] 2025-11-25 04:49:09,952 | INFO     | sum of square deviations: 439156858143.60284
[2025-11-24 23:49:43] 2025-11-25 04:49:09,980 | INFO     | sum of deviations: 2480728540077.048
[2025-11-24 23:49:43] 2025-11-25 04:49:09,980 | INFO     | mean x: 1764011296.6081924
[2025-11-24 23:49:43] 2025-11-25 04:49:09,980 | INFO     | mean y: 2880244.4728406053
[2025-11-24 23:49:43] 2025-11-25 04:49:09,980 | INFO     | intersect: -9961744211.154613
[2025-11-24 23:49:43] 2025-11-25 04:49:09,981 | INFO     | chi2: 2.2801953392264176
[2025-11-24 23:49:43] 2025-11-25 04:49:09,982 | INFO     | current chi2=2.2801953392264176 (change=22.161377643897133 %)
[2025-11-24 23:49:43] 2025-11-25 04:49:09,982 | INFO     | right removable region: 1122
[2025-11-24 23:49:43] 2025-11-25 04:49:09,983 | INFO     | sum of square deviations: 445048213440.4468
[2025-11-24 23:49:43] 2025-11-25 04:49:10,015 | INFO     | sum of deviations: 1680555542543.3247
[2025-11-24 23:49:43] 2025-11-25 04:49:10,016 | INFO     | mean x: 1764011754.1054964
[2025-11-24 23:49:43] 2025-11-25 04:49:10,016 | INFO     | mean y: 2874610.770390071
[2025-11-24 23:49:43] 2025-11-25 04:49:10,016 | INFO     | intersect: -6658245782.358108
[2025-11-24 23:49:43] 2025-11-25 04:49:10,018 | INFO     | chi2: 3.7914161961718102
[2025-11-24 23:49:43] 2025-11-25 04:49:10,018 | INFO     | current chi2=3.7914161961718102 (change=34.713167309245044 %)
[2025-11-24 23:49:43] 2025-11-25 04:49:10,020 | INFO     | sum of square deviations: 439156162134.0339
[2025-11-24 23:49:43] 2025-11-25 04:49:10,064 | INFO     | sum of deviations: 1609156737308.9648
[2025-11-24 23:49:43] 2025-11-25 04:49:10,064 | INFO     | mean x: 1764011906.6064115
[2025-11-24 23:49:43] 2025-11-25 04:49:10,064 | INFO     | mean y: 2876458.393588602
[2025-11-24 23:49:43] 2025-11-25 04:49:10,065 | INFO     | intersect: -6460818894.109709
[2025-11-24 23:49:43] 2025-11-25 04:49:10,066 | INFO     | chi2: 3.742719436109816
[2025-11-24 23:49:43] 2025-11-25 04:49:10,066 | INFO     | current chi2=3.742719436109816 (change=1.2843950002419513 %)
[2025-11-24 23:49:43] 2025-11-25 04:49:10,066 | INFO     | left removable region: 20
[2025-11-24 23:49:43] 2025-11-25 04:49:10,068 | INFO     | sum of square deviations: 414978110780.49304
[2025-11-24 23:49:43] 2025-11-25 04:49:10,110 | INFO     | sum of deviations: 2034437981589.6445
[2025-11-24 23:49:43] 2025-11-25 04:49:10,111 | INFO     | mean x: 1764011876.1107078
[2025-11-24 23:49:43] 2025-11-25 04:49:10,111 | INFO     | mean y: 2892712.953720508
[2025-11-24 23:49:43] 2025-11-25 04:49:10,111 | INFO     | intersect: -8645208638.669497
[2025-11-24 23:49:43] 2025-11-25 04:49:10,113 | INFO     | chi2: 0.1455346955344834
[2025-11-24 23:49:43] 2025-11-25 04:49:10,113 | INFO     | current memory leak: 4.90 B/s (using 1102 data points, chi2=0.15)
[2025-11-24 23:49:43] 2025-11-25 04:49:10,114 | INFO     | could have reported an average CPU frequency of 2620 MHz (41 samples)
[2025-11-24 23:49:43] 2025-11-25 04:49:10,114 | INFO     | ..............................
[2025-11-24 23:49:43] 2025-11-25 04:49:10,115 | INFO     | . Timing measurements:
[2025-11-24 23:49:43] 2025-11-25 04:49:10,115 | INFO     | . get job = 0 s
[2025-11-24 23:49:43] 2025-11-25 04:49:10,115 | INFO     | . initial setup = 2 s
[2025-11-24 23:49:43] 2025-11-25 04:49:10,115 | INFO     | . payload setup = 5 s
[2025-11-24 23:49:43] 2025-11-25 04:49:10,115 | INFO     | . stage-in = 0 s
[2025-11-24 23:49:43] 2025-11-25 04:49:10,115 | INFO     | . payload execution = 69068 s
[2025-11-24 23:49:43] 2025-11-25 04:49:10,116 | INFO     | . stage-out = 4 s
[2025-11-24 23:49:43] 2025-11-25 04:49:10,116 | INFO     | . log creation = 0 s
[2025-11-24 23:49:43] 2025-11-25 04:49:10,116 | INFO     | ..............................
[2025-11-24 23:49:43] 2025-11-25 04:49:10,174 | INFO     | time since job start (69101s) is within the limit (172800.0s)
[2025-11-24 23:49:43] 2025-11-25 04:49:10,543 | INFO     | 
[2025-11-24 23:49:43] 2025-11-25 04:49:10,543 | INFO     | job summary report
[2025-11-24 23:49:43] 2025-11-25 04:49:10,543 | INFO     | --------------------------------------------------
[2025-11-24 23:49:43] 2025-11-25 04:49:10,543 | INFO     | PanDA job id: 6895360792
[2025-11-24 23:49:43] 2025-11-25 04:49:10,544 | INFO     | task id: 47556137
[2025-11-24 23:49:43] 2025-11-25 04:49:10,544 | INFO     | errors: (none)
[2025-11-24 23:49:43] 2025-11-25 04:49:10,544 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 23:49:43] 2025-11-25 04:49:10,544 | INFO     | pilot state: finished 
[2025-11-24 23:49:43] 2025-11-25 04:49:10,544 | INFO     | transexitcode: 0
[2025-11-24 23:49:43] 2025-11-25 04:49:10,544 | INFO     | exeerrorcode: 0
[2025-11-24 23:49:43] 2025-11-25 04:49:10,545 | INFO     | exeerrordiag: 
[2025-11-24 23:49:43] 2025-11-25 04:49:10,545 | INFO     | exitcode: 0
[2025-11-24 23:49:43] 2025-11-25 04:49:10,545 | INFO     | exitmsg: OK
[2025-11-24 23:49:43] 2025-11-25 04:49:10,545 | INFO     | cpuconsumptiontime: 531707 s
[2025-11-24 23:49:43] 2025-11-25 04:49:10,545 | INFO     | nevents: 1000
[2025-11-24 23:49:43] 2025-11-25 04:49:10,545 | INFO     | neventsw: 0
[2025-11-24 23:49:43] 2025-11-25 04:49:10,546 | INFO     | pid: 8390
[2025-11-24 23:49:43] 2025-11-25 04:49:10,546 | INFO     | pgrp: 8390
[2025-11-24 23:49:43] 2025-11-25 04:49:10,546 | INFO     | corecount: 8
[2025-11-24 23:49:43] 2025-11-25 04:49:10,546 | INFO     | event service: False
[2025-11-24 23:49:43] 2025-11-25 04:49:10,546 | INFO     | sizes: {0: 2298636, 1: 2298835, 4: 2299097, 12: 2299125, 69077: 2355270, 69082: 2365239, 69085: 2365525}
[2025-11-24 23:49:43] 2025-11-25 04:49:10,546 | INFO     | --------------------------------------------------
[2025-11-24 23:49:43] 2025-11-25 04:49:10,547 | INFO     | 
[2025-11-24 23:49:43] 2025-11-25 04:49:10,547 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-24 23:49:43] 2025-11-25 04:49:10,570 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 23:49:43] 2025-11-25 04:49:10,570 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 23:49:43] 2025-11-25 04:49:10,570 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 23:49:43] 2025-11-25 04:49:10,571 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 23:49:43] 2025-11-25 04:49:10,571 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 23:49:43] 2025-11-25 04:49:10,571 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 23:49:43] 2025-11-25 04:49:10,571 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 23:49:43] 2025-11-25 04:49:10,571 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 23:49:43] 2025-11-25 04:49:10,571 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 23:49:43] 2025-11-25 04:49:10,572 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 23:49:43] 2025-11-25 04:49:10,572 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 23:49:43] 2025-11-25 04:49:10,572 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 23:49:43] 2025-11-25 04:49:10,572 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 23:49:43] 2025-11-25 04:49:10,572 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 23:49:43] 2025-11-25 04:49:10,573 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 23:49:43] 2025-11-25 04:49:10,573 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 23:49:43] 2025-11-25 04:49:10,573 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 23:49:43] 2025-11-25 04:49:10,573 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 23:49:43] 2025-11-25 04:49:10,573 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 23:49:43] 2025-11-25 04:49:10,573 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 23:49:43] 2025-11-25 04:49:10,574 | INFO     | job 6895360792 has completed (purged errors)
[2025-11-24 23:49:43] 2025-11-25 04:49:10,574 | INFO     | overall cleanup function is called
[2025-11-24 23:49:43] 2025-11-25 04:49:11,589 | INFO     | --- collectZombieJob: --- 10, [8390]
[2025-11-24 23:49:43] 2025-11-25 04:49:11,589 | INFO     | zombie collector waiting for pid 8390
[2025-11-24 23:49:43] 2025-11-25 04:49:11,589 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 23:49:43] 2025-11-25 04:49:11,590 | INFO     | collected zombie processes
[2025-11-24 23:49:43] 2025-11-25 04:49:11,590 | INFO     | will attempt to kill all subprocesses of pid=8390
[2025-11-24 23:49:43] 2025-11-25 04:49:11,768 | INFO     | process IDs to be killed: [8390] (in reverse order)
[2025-11-24 23:49:43] 2025-11-25 04:49:11,822 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 23:49:43] 2025-11-25 04:49:11,822 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 23:49:43] 2025-11-25 04:49:11,825 | INFO     | did not find any defunct processes belonging to 8390
[2025-11-24 23:49:43] 2025-11-25 04:49:11,828 | INFO     | did not find any defunct processes belonging to 8390
[2025-11-24 23:49:43] 2025-11-25 04:49:11,829 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 23:49:43] 2025-11-25 04:49:11,829 | INFO     | ready for new job
[2025-11-24 23:49:43] 2025-11-25 04:49:11,829 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 23:49:43] 2025-11-25 04:49:11,833 | INFO     | ***************************************
[2025-11-24 23:49:43] 2025-11-25 04:49:11,833 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 23:49:43] 2025-11-25 04:49:11,833 | INFO     | ***************************************
[2025-11-24 23:49:43] 2025-11-25 04:49:11,833 | INFO     | 
[2025-11-24 23:49:43] 2025-11-25 04:49:11,834 | INFO     | architecture information:
[2025-11-24 23:49:43] 2025-11-25 04:49:11,834 | INFO     | executing command: cat /etc/os-release
[2025-11-24 23:49:43] 2025-11-25 04:49:11,848 | INFO     | cat /etc/os-release:
[2025-11-24 23:49:43] NAME="CentOS Linux"
[2025-11-24 23:49:43] VERSION="7 (Core)"
[2025-11-24 23:49:43] ID="centos"
[2025-11-24 23:49:43] ID_LIKE="rhel fedora"
[2025-11-24 23:49:43] VERSION_ID="7"
[2025-11-24 23:49:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 23:49:43] ANSI_COLOR="0;31"
[2025-11-24 23:49:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 23:49:43] HOME_URL="https://www.centos.org/"
[2025-11-24 23:49:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 23:49:43] 
[2025-11-24 23:49:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 23:49:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 23:49:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 23:49:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 23:49:43] 
[2025-11-24 23:49:43] 2025-11-25 04:49:11,848 | INFO     | ***************************************
[2025-11-24 23:49:43] 2025-11-25 04:49:12,352 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-24 23:49:43] 2025-11-25 04:49:12,384 | INFO     | sufficient remaining disk space (24898437120 B)
[2025-11-24 23:49:43] 2025-11-25 04:49:12,385 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 23:49:43] 2025-11-25 04:49:12,385 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 23:49:43] 2025-11-25 04:49:12,385 | INFO     | update_server=False
[2025-11-24 23:49:43] 2025-11-25 04:49:12,385 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 23:49:43] 2025-11-25 04:49:12,386 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 23:49:43] 2025-11-25 04:49:12,386 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 23:49:43] 2025-11-25 04:49:12,386 | INFO     | aborting loop
[2025-11-24 23:49:43] 2025-11-25 04:49:12,628 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 23:49:43] 2025-11-25 04:49:12,962 | INFO     | all job control threads have been joined
[2025-11-24 23:49:43] 2025-11-25 04:49:13,069 | INFO     | all payload control threads have been joined
[2025-11-24 23:49:43] 2025-11-25 04:49:13,391 | INFO     | [job] retrieve thread has finished
[2025-11-24 23:49:43] 2025-11-25 04:49:13,392 | INFO     | [job] job monitor thread has finished
[2025-11-24 23:49:43] 2025-11-25 04:49:13,441 | INFO     | all data control threads have been joined
[2025-11-24 23:49:43] 2025-11-25 04:49:13,697 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 23:49:43] 2025-11-25 04:49:13,839 | INFO     | [payload] failed_post thread has finished
[2025-11-24 23:49:43] 2025-11-25 04:49:13,965 | INFO     | [job] control thread has finished
[2025-11-24 23:49:43] 2025-11-25 04:49:14,073 | INFO     | [payload] control thread has finished
[2025-11-24 23:49:43] 2025-11-25 04:49:14,101 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 23:49:43] 2025-11-25 04:49:14,146 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 23:49:43] 2025-11-25 04:49:14,255 | INFO     | [job] validate thread has finished
[2025-11-24 23:49:43] 2025-11-25 04:49:14,318 | INFO     | [data] copytool_in thread has finished
[2025-11-24 23:49:43] 2025-11-25 04:49:14,392 | INFO     | [data] copytool_out thread has finished
[2025-11-24 23:49:43] 2025-11-25 04:49:14,400 | INFO     | [payload] validate_post thread has finished
[2025-11-24 23:49:43] 2025-11-25 04:49:14,446 | INFO     | [data] control thread has finished
[2025-11-24 23:49:43] 2025-11-25 04:49:14,852 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 23:49:43] 2025-11-25 04:49:15,267 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 23:49:43] 2025-11-25 04:49:16,290 | INFO     | [job] queue monitor thread has finished
[2025-11-24 23:49:43] 2025-11-25 04:49:16,636 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 23:49:43] 2025-11-25 04:49:24,032 | INFO     | [monitor] cgroup control has ended
[2025-11-24 23:49:43] 2025-11-25 04:49:25,554 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139920124987200)>', '<ExcThread(monitor, started 139919531947776)>']
[2025-11-24 23:49:43] 2025-11-25 04:49:30,579 | INFO     | all workflow threads have been joined
[2025-11-24 23:49:43] 2025-11-25 04:49:30,579 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 23:49:43] 2025-11-25 04:49:30,580 | INFO     | traces error code: 0
[2025-11-24 23:49:43] 2025-11-25 04:49:30,580 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 23:49:43] 2025-11-25 04:49:43,381 | INFO     | PID=1842 has CPU usage=6.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-24 23:49:43] 2025-11-25 04:49:43,381 | INFO     | .. there are 3 such processes running
[2025-11-24 23:49:43] 2025-11-25 04:49:43,382 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 23:49:43] 2025-11-25 04:49:43,382 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 23:49:43] 2025-11-25 04:49:43,382 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 23:49:43] 2025-11-25 04:49:43,382 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 23:49:43] 2025-11-25 04:49:43,382 | INFO     | [monitor] control thread has ended
[2025-11-24 23:49:43] 2025-11-25 04:49:43,479 [wrapper] ==== pilot stdout END ====
[2025-11-24 23:49:43] 2025-11-25 04:49:43,482 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 23:49:43] 2025-11-25 04:49:43,484 [wrapper] pilotpid: 1842
[2025-11-24 23:49:43] 2025-11-25 04:49:43,486 [wrapper] Pilot exit status: 0
[2025-11-24 23:49:43] 2025-11-25 04:49:43,493 [wrapper] pandaids: 6895360792
[2025-11-24 23:49:43] 2025-11-25 04:49:43,520 [wrapper] cleanup supervisor_pilot 16461 1843
[2025-11-24 23:49:43] 2025-11-25 04:49:43,523 [wrapper] Test setup, not cleaning
[2025-11-24 23:49:43] 2025-11-25 04:49:43,525 [wrapper] apfmon messages muted
[2025-11-24 23:49:43] 2025-11-25 04:49:43,527 [wrapper] ==== wrapper stdout END ====
[2025-11-24 23:49:43] 2025-11-25 04:49:43,529 [wrapper] ==== wrapper stderr END ====
[2025-11-24 23:49:43]  *** Error codes and diagnostics ***
[2025-11-24 23:49:43]     "exeErrorCode": 0,
[2025-11-24 23:49:43]     "exeErrorDiag": "",
[2025-11-24 23:49:43]     "pilotErrorCode": 0,
[2025-11-24 23:49:43]     "pilotErrorDiag": "",
[2025-11-24 23:49:43]  *** Listing of results directory ***
[2025-11-24 23:49:43] total 1321092
[2025-11-24 23:49:43] -rw-r--r-- 1 boincer umatlas    576529 Nov 23 08:42 pilot3.tar.gz
[2025-11-24 23:49:43] -rw-r--r-- 1 boincer umatlas      5112 Nov 23 08:51 queuedata.json
[2025-11-24 23:49:43] -rwx------ 1 boincer umatlas     36292 Nov 23 08:51 runpilot2-wrapper.sh
[2025-11-24 23:49:43] -rw-r--r-- 1 boincer umatlas       100 Nov 24 04:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 23:49:43] -rwxr-xr-x 1 boincer umatlas      7986 Nov 24 04:37 run_atlas
[2025-11-24 23:49:43] -rw-r--r-- 1 boincer umatlas       105 Nov 24 04:37 job.xml
[2025-11-24 23:49:43] -rw-r--r-- 2 boincer umatlas 409515293 Nov 24 04:37 EVNT.47483658._000753.pool.root.1
[2025-11-24 23:49:43] -rw-r--r-- 2 boincer umatlas     15847 Nov 24 04:37 start_atlas.sh
[2025-11-24 23:49:43] drwxrwx--x 2 boincer umatlas      4096 Nov 24 04:37 shared
[2025-11-24 23:49:43] -rw-r--r-- 2 boincer umatlas    590100 Nov 24 04:37 input.tar.gz
[2025-11-24 23:49:43] -rw-r--r-- 1 boincer umatlas         0 Nov 24 04:37 boinc_lockfile
[2025-11-24 23:49:43] -rw-r--r-- 1 boincer umatlas      2786 Nov 24 04:37 pandaJob.out
[2025-11-24 23:49:43] -rw------- 1 boincer umatlas        57 Nov 24 04:37 setup.sh.local
[2025-11-24 23:49:43] -rw------- 1 boincer umatlas    989824 Nov 24 04:37 agis_schedconf.cvmfs.json
[2025-11-24 23:49:43] drwx------ 5 boincer umatlas      4096 Nov 24 04:37 pilot3
[2025-11-24 23:49:43] -rw-r--r-- 1 boincer umatlas       532 Nov 24 23:36 boinc_task_state.xml
[2025-11-24 23:49:43] -rw-r--r-- 1 boincer umatlas      5953 Nov 24 23:47 init_data.xml
[2025-11-24 23:49:43] -rw------- 1 boincer umatlas 915657048 Nov 24 23:48 HITS.47556137._007482.pool.root.1
[2025-11-24 23:49:43] -rw------- 1 boincer umatlas      1067 Nov 24 23:48 memory_monitor_summary.json
[2025-11-24 23:49:43] -rw------- 1 boincer umatlas   1516227 Nov 24 23:49 agis_ddmendpoints.agis.ALL.json
[2025-11-24 23:49:43] -rw------- 1 boincer umatlas   2302930 Nov 24 23:49 log.47556137._007482.job.log.tgz.1
[2025-11-24 23:49:43] -rw------- 1 boincer umatlas      8663 Nov 24 23:49 heartbeat.json
[2025-11-24 23:49:43] -rw-r--r-- 1 boincer umatlas      8192 Nov 24 23:49 boinc_mmap_file
[2025-11-24 23:49:43] -rw-r--r-- 1 boincer umatlas        29 Nov 24 23:49 wrapper_checkpoint.txt
[2025-11-24 23:49:43] -rw------- 1 boincer umatlas        95 Nov 24 23:49 pilot_heartbeat.json
[2025-11-24 23:49:43] -rw------- 1 boincer umatlas       819 Nov 24 23:49 pilotlog.txt
[2025-11-24 23:49:43] -rw------- 1 boincer umatlas   9551870 Nov 24 23:49 log.47556137._007482.job.log.1
[2025-11-24 23:49:43] -rw------- 1 boincer umatlas       353 Nov 24 23:49 output.list
[2025-11-24 23:49:43] -rw-r--r-- 1 boincer umatlas       620 Nov 24 23:49 runtime_log
[2025-11-24 23:49:43] -rw------- 1 boincer umatlas  11878400 Nov 24 23:49 result.tar.gz
[2025-11-24 23:49:43] -rw-r--r-- 1 boincer umatlas      9343 Nov 24 23:49 runtime_log.err
[2025-11-24 23:49:43] -rw------- 1 boincer umatlas       668 Nov 24 23:49 eXyMDmWgPh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm6YIKDmKIrOwm.diag
[2025-11-24 23:49:43] -rw-r--r-- 1 boincer umatlas     21286 Nov 24 23:49 stderr.txt
[2025-11-24 23:49:43] HITS file was successfully produced:
[2025-11-24 23:49:43] -rw------- 1 boincer umatlas 915657048 Nov 24 23:48 shared/HITS.pool.root.1
[2025-11-24 23:49:43]  *** Contents of shared directory: ***
[2025-11-24 23:49:43] total 1306320
[2025-11-24 23:49:43] -rw-r--r-- 2 boincer umatlas 409515293 Nov 24 04:37 ATLAS.root_0
[2025-11-24 23:49:43] -rw-r--r-- 2 boincer umatlas     15847 Nov 24 04:37 start_atlas.sh
[2025-11-24 23:49:43] -rw-r--r-- 2 boincer umatlas    590100 Nov 24 04:37 input.tar.gz
[2025-11-24 23:49:43] -rw------- 1 boincer umatlas 915657048 Nov 24 23:48 HITS.pool.root.1
[2025-11-24 23:49:43] -rw------- 1 boincer umatlas  11878400 Nov 24 23:49 result.tar.gz
23:49:44 (30568): run_atlas exited; CPU time 530058.872066
23:49:44 (30568): called boinc_finish(0)

</stderr_txt>
]]>

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