Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:42:09 (317): wrapper (7.7.26015): starting
01:42:09 (317): wrapper: running run_atlas (--nthreads 8)
[2025-11-27 01:42:09] Arguments: --nthreads 8
[2025-11-27 01:42:09] Threads: 8
[2025-11-27 01:42:09] Checking for CVMFS
[2025-11-27 01:42:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 01:42:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 01:42:11] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 01:42:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 01:42:12] 2.11.2.0 1304 285938 140224 153341 0 85 18091080 25165825 1288 130560 14 131805962 99.882 83060300 2741 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-27 01:42:12] CVMFS is ok
[2025-11-27 01:42:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 01:42:12] Checking for apptainer binary...
[2025-11-27 01:42:12] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 01:42:12] Running /usr/bin/apptainer --version
[2025-11-27 01:42:12] apptainer version 1.3.2-1.el7
[2025-11-27 01:42:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 01:42:20] cg-vwn245.simple-grid.lan
[2025-11-27 01:42:20] apptainer works
[2025-11-27 01:42:20] Set ATHENA_PROC_NUMBER=8
[2025-11-27 01:42:20] Set ATHENA_CORE_NUMBER=8
[2025-11-27 01:42:20] Starting ATLAS job with PandaID=6895358619
[2025-11-27 01:42:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/18 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-28 00:28:07]  *** The last 200 lines of the pilot log: ***
[2025-11-28 00:28:07] 2025-11-27 23:27:28,275 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 00:28:07] 2025-11-27 23:27:30,190 | INFO     | time since job start (81658s) is within the limit (172800.0s)
[2025-11-28 00:28:07] 2025-11-27 23:27:30,219 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-28 00:28:07] 2025-11-27 23:27:30,220 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-28 00:28:07] 2025-11-27 23:27:30,221 | INFO     | using path: /var/lib/boinc/slots/18/PanDA_Pilot-6895358619/memory_monitor_summary.json (trf name=prmon)
[2025-11-28 00:28:07] 2025-11-27 23:27:30,222 | INFO     | extracted standard info from prmon json
[2025-11-28 00:28:07] 2025-11-27 23:27:30,222 | INFO     | extracted standard memory fields from prmon json
[2025-11-28 00:28:07] 2025-11-27 23:27:30,222 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-28 00:28:07] 2025-11-27 23:27:30,258 | INFO     | fitting pss+swap vs Time
[2025-11-28 00:28:07] 2025-11-27 23:27:30,261 | INFO     | sum of square deviations: 727869093282.06
[2025-11-28 00:28:07] 2025-11-27 23:27:30,322 | INFO     | sum of deviations: 3208171930644.1084
[2025-11-28 00:28:07] 2025-11-27 23:27:30,322 | INFO     | mean x: 1764245402.0820165
[2025-11-28 00:28:07] 2025-11-27 23:27:30,322 | INFO     | mean y: 2842808.916478555
[2025-11-28 00:28:07] 2025-11-27 23:27:30,322 | INFO     | intersect: -7773284285.868846
[2025-11-28 00:28:07] 2025-11-27 23:27:30,324 | INFO     | chi2: 16.581042349799603
[2025-11-28 00:28:07] 2025-11-27 23:27:30,326 | INFO     | sum of square deviations: 719685173761.185
[2025-11-28 00:28:07] 2025-11-27 23:27:30,399 | INFO     | sum of deviations: 3655729198228.3833
[2025-11-28 00:28:07] 2025-11-27 23:27:30,400 | INFO     | mean x: 1764245249.5861027
[2025-11-28 00:28:07] 2025-11-27 23:27:30,400 | INFO     | mean y: 2851148.0098187313
[2025-11-28 00:28:07] 2025-11-27 23:27:30,400 | INFO     | intersect: -8958849199.436584
[2025-11-28 00:28:07] 2025-11-27 23:27:30,402 | INFO     | chi2: 13.336350881217754
[2025-11-28 00:28:07] 2025-11-27 23:27:30,402 | INFO     | current chi2=13.336350881217754 (change=19.56868211376991 %)
[2025-11-28 00:28:07] 2025-11-27 23:27:30,402 | INFO     | right removable region: 1323
[2025-11-28 00:28:07] 2025-11-27 23:27:30,404 | INFO     | sum of square deviations: 719684296581.1837
[2025-11-28 00:28:07] 2025-11-27 23:27:30,481 | INFO     | sum of deviations: 2658885621340.003
[2025-11-28 00:28:07] 2025-11-27 23:27:30,481 | INFO     | mean x: 1764245554.5861027
[2025-11-28 00:28:07] 2025-11-27 23:27:30,482 | INFO     | mean y: 2853042.5
[2025-11-28 00:28:07] 2025-11-27 23:27:30,482 | INFO     | intersect: -6515181545.5630865
[2025-11-28 00:28:07] 2025-11-27 23:27:30,483 | INFO     | chi2: 12.007221466882216
[2025-11-28 00:28:07] 2025-11-27 23:27:30,483 | INFO     | current chi2=12.007221466882216 (change=27.58464025618188 %)
[2025-11-28 00:28:07] 2025-11-27 23:27:30,485 | INFO     | sum of square deviations: 711561082430.2648
[2025-11-28 00:28:07] 2025-11-27 23:27:30,557 | INFO     | sum of deviations: 2200225787340.4673
[2025-11-28 00:28:07] 2025-11-27 23:27:30,558 | INFO     | mean x: 1764245707.09022
[2025-11-28 00:28:07] 2025-11-27 23:27:30,558 | INFO     | mean y: 2861652.7103866567
[2025-11-28 00:28:07] 2025-11-27 23:27:30,558 | INFO     | intersect: -5452381749.144775
[2025-11-28 00:28:07] 2025-11-27 23:27:30,559 | INFO     | chi2: 8.940925181441255
[2025-11-28 00:28:07] 2025-11-27 23:27:30,560 | INFO     | current chi2=8.940925181441255 (change=25.537101101185506 %)
[2025-11-28 00:28:07] 2025-11-27 23:27:30,561 | INFO     | sum of square deviations: 703499539617.5403
[2025-11-28 00:28:07] 2025-11-27 23:27:30,607 | INFO     | sum of deviations: 2010476296760.645
[2025-11-28 00:28:07] 2025-11-27 23:27:30,608 | INFO     | mean x: 1764245859.591324
[2025-11-28 00:28:07] 2025-11-27 23:27:30,608 | INFO     | mean y: 2865238.0570776258
[2025-11-28 00:28:07] 2025-11-27 23:27:30,608 | INFO     | intersect: -5039034980.235588
[2025-11-28 00:28:07] 2025-11-27 23:27:30,610 | INFO     | chi2: 8.31426990871674
[2025-11-28 00:28:07] 2025-11-27 23:27:30,610 | INFO     | current chi2=8.31426990871674 (change=7.008841479014583 %)
[2025-11-28 00:28:07] 2025-11-27 23:27:30,610 | INFO     | left removable region: 30
[2025-11-28 00:28:07] 2025-11-27 23:27:30,612 | INFO     | sum of square deviations: 670306973224.4896
[2025-11-28 00:28:07] 2025-11-27 23:27:30,658 | INFO     | sum of deviations: 2311070050045.663
[2025-11-28 00:28:07] 2025-11-27 23:27:30,658 | INFO     | mean x: 1764246134.0943542
[2025-11-28 00:28:07] 2025-11-27 23:27:30,659 | INFO     | mean y: 2880287.871616396
[2025-11-28 00:28:07] 2025-11-27 23:27:30,659 | INFO     | intersect: -6079849810.848089
[2025-11-28 00:28:07] 2025-11-27 23:27:30,660 | INFO     | chi2: 4.146914417156984
[2025-11-28 00:28:07] 2025-11-27 23:27:30,660 | INFO     | current memory leak: 3.45 B/s (using 1293 data points, chi2=4.15)
[2025-11-28 00:28:07] 2025-11-27 23:27:30,662 | INFO     | could have reported an average CPU frequency of 1999 MHz (45 samples)
[2025-11-28 00:28:07] 2025-11-27 23:27:30,662 | INFO     | ..............................
[2025-11-28 00:28:07] 2025-11-27 23:27:30,662 | INFO     | . Timing measurements:
[2025-11-28 00:28:07] 2025-11-27 23:27:30,662 | INFO     | . get job = 0 s
[2025-11-28 00:28:07] 2025-11-27 23:27:30,662 | INFO     | . initial setup = 4 s
[2025-11-28 00:28:07] 2025-11-27 23:27:30,662 | INFO     | . payload setup = 155 s
[2025-11-28 00:28:07] 2025-11-27 23:27:30,662 | INFO     | . stage-in = 0 s
[2025-11-28 00:28:07] 2025-11-27 23:27:30,662 | INFO     | . payload execution = 81219 s
[2025-11-28 00:28:07] 2025-11-27 23:27:30,663 | INFO     | . stage-out = 5 s
[2025-11-28 00:28:07] 2025-11-27 23:27:30,663 | INFO     | . log creation = 2 s
[2025-11-28 00:28:07] 2025-11-27 23:27:30,663 | INFO     | ..............................
[2025-11-28 00:28:07] 2025-11-27 23:27:30,956 | INFO     | 
[2025-11-28 00:28:07] 2025-11-27 23:27:30,956 | INFO     | job summary report
[2025-11-28 00:28:07] 2025-11-27 23:27:30,956 | INFO     | --------------------------------------------------
[2025-11-28 00:28:07] 2025-11-27 23:27:30,956 | INFO     | PanDA job id: 6895358619
[2025-11-28 00:28:07] 2025-11-27 23:27:30,956 | INFO     | task id: 47556149
[2025-11-28 00:28:07] 2025-11-27 23:27:30,956 | INFO     | errors: (none)
[2025-11-28 00:28:07] 2025-11-27 23:27:30,956 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-28 00:28:07] 2025-11-27 23:27:30,956 | INFO     | pilot state: finished 
[2025-11-28 00:28:07] 2025-11-27 23:27:30,957 | INFO     | transexitcode: 0
[2025-11-28 00:28:07] 2025-11-27 23:27:30,957 | INFO     | exeerrorcode: 0
[2025-11-28 00:28:07] 2025-11-27 23:27:30,957 | INFO     | exeerrordiag: 
[2025-11-28 00:28:07] 2025-11-27 23:27:30,957 | INFO     | exitcode: 0
[2025-11-28 00:28:07] 2025-11-27 23:27:30,957 | INFO     | exitmsg: OK
[2025-11-28 00:28:07] 2025-11-27 23:27:30,957 | INFO     | cpuconsumptiontime: 308248 s
[2025-11-28 00:28:07] 2025-11-27 23:27:30,957 | INFO     | nevents: 1000
[2025-11-28 00:28:07] 2025-11-27 23:27:30,957 | INFO     | neventsw: 0
[2025-11-28 00:28:07] 2025-11-27 23:27:30,957 | INFO     | pid: 10805
[2025-11-28 00:28:07] 2025-11-27 23:27:30,957 | INFO     | pgrp: 10805
[2025-11-28 00:28:07] 2025-11-27 23:27:30,957 | INFO     | corecount: 8
[2025-11-28 00:28:07] 2025-11-27 23:27:30,957 | INFO     | event service: False
[2025-11-28 00:28:07] 2025-11-27 23:27:30,957 | INFO     | sizes: {0: 2284037, 1: 2284121, 2: 2284320, 13: 2284320, 23: 2284376, 34: 2284404, 45: 2284560, 56: 2284588, 66: 2284616, 77: 2284644, 88: 2284700, 95: 2285270, 98
[2025-11-28 00:28:07] 2025-11-27 23:27:30,958 | INFO     | --------------------------------------------------
[2025-11-28 00:28:07] 2025-11-27 23:27:30,958 | INFO     | 
[2025-11-28 00:28:07] 2025-11-27 23:27:30,958 | INFO     | executing command: ls -lF /var/lib/boinc/slots/18
[2025-11-28 00:28:07] 2025-11-27 23:27:31,374 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-28 00:28:07] 2025-11-27 23:27:31,374 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-28 00:28:07] 2025-11-27 23:27:31,374 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-28 00:28:07] 2025-11-27 23:27:31,375 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-28 00:28:07] 2025-11-27 23:27:31,375 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-28 00:28:07] 2025-11-27 23:27:31,375 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-28 00:28:07] 2025-11-27 23:27:31,375 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-28 00:28:07] 2025-11-27 23:27:31,375 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-28 00:28:07] 2025-11-27 23:27:31,375 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-28 00:28:07] 2025-11-27 23:27:31,375 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-28 00:28:07] 2025-11-27 23:27:31,375 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-28 00:28:07] 2025-11-27 23:27:31,375 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-28 00:28:07] 2025-11-27 23:27:31,375 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-28 00:28:07] 2025-11-27 23:27:31,375 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-28 00:28:07] 2025-11-27 23:27:31,376 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-28 00:28:07] 2025-11-27 23:27:31,376 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-28 00:28:07] 2025-11-27 23:27:31,376 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-28 00:28:07] 2025-11-27 23:27:31,376 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-28 00:28:07] 2025-11-27 23:27:31,376 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-28 00:28:07] 2025-11-27 23:27:31,376 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-28 00:28:07] 2025-11-27 23:27:31,376 | INFO     | job 6895358619 has completed (purged errors)
[2025-11-28 00:28:07] 2025-11-27 23:27:31,376 | INFO     | overall cleanup function is called
[2025-11-28 00:28:07] 2025-11-27 23:27:32,401 | INFO     | --- collectZombieJob: --- 10, [10805]
[2025-11-28 00:28:07] 2025-11-27 23:27:32,401 | INFO     | zombie collector waiting for pid 10805
[2025-11-28 00:28:07] 2025-11-27 23:27:32,401 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-28 00:28:07] 2025-11-27 23:27:32,401 | INFO     | collected zombie processes
[2025-11-28 00:28:07] 2025-11-27 23:27:32,401 | INFO     | will attempt to kill all subprocesses of pid=10805
[2025-11-28 00:28:07] 2025-11-27 23:27:32,534 | INFO     | process IDs to be killed: [10805] (in reverse order)
[2025-11-28 00:28:07] 2025-11-27 23:27:33,582 | WARNING  | found no corresponding commands to process id(s)
[2025-11-28 00:28:07] 2025-11-27 23:27:33,583 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-28 00:28:07] 2025-11-27 23:27:33,585 | INFO     | did not find any defunct processes belonging to 10805
[2025-11-28 00:28:07] 2025-11-27 23:27:33,588 | INFO     | did not find any defunct processes belonging to 10805
[2025-11-28 00:28:07] 2025-11-27 23:27:33,665 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-28 00:28:07] 2025-11-27 23:27:33,665 | INFO     | ready for new job
[2025-11-28 00:28:07] 2025-11-27 23:27:33,665 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-28 00:28:07] 2025-11-27 23:27:33,670 | INFO     | ***************************************
[2025-11-28 00:28:07] 2025-11-27 23:27:33,670 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-28 00:28:07] 2025-11-27 23:27:33,670 | INFO     | ***************************************
[2025-11-28 00:28:07] 2025-11-27 23:27:33,670 | INFO     | 
[2025-11-28 00:28:07] 2025-11-27 23:27:33,671 | INFO     | pilot is running in a VM
[2025-11-28 00:28:07] 2025-11-27 23:27:33,671 | INFO     | architecture information:
[2025-11-28 00:28:07] 2025-11-27 23:27:33,681 | INFO     | executing command: cat /etc/os-release
[2025-11-28 00:28:07] 2025-11-27 23:27:33,897 | INFO     | cat /etc/os-release:
[2025-11-28 00:28:07] NAME="CentOS Linux"
[2025-11-28 00:28:07] VERSION="7 (Core)"
[2025-11-28 00:28:07] ID="centos"
[2025-11-28 00:28:07] ID_LIKE="rhel fedora"
[2025-11-28 00:28:07] VERSION_ID="7"
[2025-11-28 00:28:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-28 00:28:07] ANSI_COLOR="0;31"
[2025-11-28 00:28:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-28 00:28:07] HOME_URL="https://www.centos.org/"
[2025-11-28 00:28:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-28 00:28:07] 
[2025-11-28 00:28:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-28 00:28:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-28 00:28:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-28 00:28:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-28 00:28:07] 
[2025-11-28 00:28:07] 2025-11-27 23:27:33,897 | INFO     | ***************************************
[2025-11-28 00:28:07] 2025-11-27 23:27:34,401 | INFO     | executing command: df -mP /var/lib/boinc/slots/18
[2025-11-28 00:28:07] 2025-11-27 23:27:34,579 | INFO     | sufficient remaining disk space (495003369472 B)
[2025-11-28 00:28:07] 2025-11-27 23:27:34,579 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-28 00:28:07] 2025-11-27 23:27:34,580 | INFO     | current server update state: UPDATING_FINAL
[2025-11-28 00:28:07] 2025-11-27 23:27:34,580 | INFO     | update_server=False
[2025-11-28 00:28:07] 2025-11-27 23:27:34,580 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-28 00:28:07] 2025-11-27 23:27:34,580 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-28 00:28:07] 2025-11-27 23:27:34,580 | INFO     | aborting loop
[2025-11-28 00:28:07] 2025-11-27 23:27:34,583 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-28 00:28:07] 2025-11-27 23:27:34,872 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-28 00:28:07] 2025-11-27 23:27:34,985 | INFO     | all payload control threads have been joined
[2025-11-28 00:28:07] 2025-11-27 23:27:35,305 | INFO     | all data control threads have been joined
[2025-11-28 00:28:07] 2025-11-27 23:27:35,586 | INFO     | [job] retrieve thread has finished
[2025-11-28 00:28:07] 2025-11-27 23:27:35,586 | INFO     | [job] job monitor thread has finished
[2025-11-28 00:28:07] 2025-11-27 23:27:35,644 | INFO     | [payload] validate_post thread has finished
[2025-11-28 00:28:07] 2025-11-27 23:27:35,648 | INFO     | all job control threads have been joined
[2025-11-28 00:28:07] 2025-11-27 23:27:35,794 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-28 00:28:07] 2025-11-27 23:27:35,991 | INFO     | [payload] control thread has finished
[2025-11-28 00:28:07] 2025-11-27 23:27:36,057 | INFO     | [job] create_data_payload thread has finished
[2025-11-28 00:28:07] 2025-11-27 23:27:36,173 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-28 00:28:07] 2025-11-27 23:27:36,311 | INFO     | [data] control thread has finished
[2025-11-28 00:28:07] 2025-11-27 23:27:36,317 | INFO     | [job] validate thread has finished
[2025-11-28 00:28:07] 2025-11-27 23:27:36,463 | INFO     | [payload] validate_pre thread has finished
[2025-11-28 00:28:07] 2025-11-27 23:27:36,590 | INFO     | [data] copytool_out thread has finished
[2025-11-28 00:28:07] 2025-11-27 23:27:36,654 | INFO     | [job] control thread has finished
[2025-11-28 00:28:07] 2025-11-27 23:27:36,720 | INFO     | [payload] execute_payloads thread has finished
[2025-11-28 00:28:07] 2025-11-27 23:27:36,800 | INFO     | [job] queue monitor thread has finished
[2025-11-28 00:28:07] 2025-11-27 23:27:36,881 | INFO     | [payload] failed_post thread has finished
[2025-11-28 00:28:07] 2025-11-27 23:27:36,953 | INFO     | [data] copytool_in thread has finished
[2025-11-28 00:28:07] 2025-11-27 23:27:38,883 | INFO     | [data] queue_monitor thread has finished
[2025-11-28 00:28:07] 2025-11-27 23:27:54,409 | INFO     | [monitor] cgroup control has ended
[2025-11-28 00:28:07] 2025-11-27 23:27:55,059 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140649053984576)>', '<ExcThread(monitor, started 140648468428544)>']
[2025-11-28 00:28:07] 2025-11-27 23:28:00,085 | INFO     | all workflow threads have been joined
[2025-11-28 00:28:07] 2025-11-27 23:28:00,085 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-28 00:28:07] 2025-11-27 23:28:00,085 | INFO     | traces error code: 0
[2025-11-28 00:28:07] 2025-11-27 23:28:00,085 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-28 00:28:07] 2025-11-27 23:28:03,371 | INFO     | PID=4217 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-28 00:28:07] 2025-11-27 23:28:03,372 | INFO     | .. there are 9 such processes running
[2025-11-28 00:28:07] 2025-11-27 23:28:03,372 | INFO     | found 0 job(s) in 20 queues
[2025-11-28 00:28:07] 2025-11-27 23:28:03,372 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-28 00:28:07] 2025-11-27 23:28:03,372 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-28 00:28:07] 2025-11-27 23:28:03,372 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-28 00:28:07] 2025-11-27 23:28:03,373 | INFO     | [monitor] control thread has ended
[2025-11-28 00:28:07] 2025-11-27 23:28:03,607 [wrapper] ==== pilot stdout END ====
[2025-11-28 00:28:07] 2025-11-27 23:28:03,684 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-28 00:28:07] 2025-11-27 23:28:03,774 [wrapper] pilotpid: 4217
[2025-11-28 00:28:07] 2025-11-27 23:28:03,826 [wrapper] Pilot exit status: 0
[2025-11-28 00:28:07] 2025-11-27 23:28:04,201 [wrapper] pandaids: 6895358619
[2025-11-28 00:28:07] 2025-11-27 23:28:05,036 [wrapper] cleanup supervisor_pilot 10552 4218
[2025-11-28 00:28:07] 2025-11-27 23:28:05,100 [wrapper] Test setup, not cleaning
[2025-11-28 00:28:07] 2025-11-27 23:28:05,164 [wrapper] apfmon messages muted
[2025-11-28 00:28:07] 2025-11-27 23:28:05,179 [wrapper] ==== wrapper stdout END ====
[2025-11-28 00:28:07] 2025-11-27 23:28:05,280 [wrapper] ==== wrapper stderr END ====
[2025-11-28 00:28:07]  *** Error codes and diagnostics ***
[2025-11-28 00:28:07]     "exeErrorCode": 0,
[2025-11-28 00:28:07]     "exeErrorDiag": "",
[2025-11-28 00:28:07]     "pilotErrorCode": 0,
[2025-11-28 00:28:07]     "pilotErrorDiag": "",
[2025-11-28 00:28:07]  *** Listing of results directory ***
[2025-11-28 00:28:07] total 1310212
[2025-11-28 00:28:07] -rw-r--r--. 1 boinc boinc    576529 Nov 23 13:50 pilot3.tar.gz
[2025-11-28 00:28:07] -rw-r--r--. 1 boinc boinc      5112 Nov 23 13:59 queuedata.json
[2025-11-28 00:28:07] -rwx------. 1 boinc boinc     36292 Nov 23 14:00 runpilot2-wrapper.sh
[2025-11-28 00:28:07] -rw-r--r--. 1 boinc boinc       100 Nov 27 01:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-28 00:28:07] -rwxr-xr-x. 1 boinc boinc      7986 Nov 27 01:42 run_atlas
[2025-11-28 00:28:07] -rw-r--r--. 1 boinc boinc       105 Nov 27 01:42 job.xml
[2025-11-28 00:28:07] -rw-r--r--. 2 boinc boinc 408134768 Nov 27 01:42 EVNT.47483658._001162.pool.root.1
[2025-11-28 00:28:07] -rw-r--r--. 2 boinc boinc     15847 Nov 27 01:42 start_atlas.sh
[2025-11-28 00:28:07] drwxrwx--x. 2 boinc boinc        68 Nov 27 01:42 shared
[2025-11-28 00:28:07] -rw-r--r--. 2 boinc boinc    590102 Nov 27 01:42 input.tar.gz
[2025-11-28 00:28:07] -rw-r--r--. 1 boinc boinc      6393 Nov 27 01:42 init_data.xml
[2025-11-28 00:28:07] -rw-r--r--. 1 boinc boinc         0 Nov 27 01:42 boinc_lockfile
[2025-11-28 00:28:07] -rw-r--r--. 1 boinc boinc      2784 Nov 27 01:42 pandaJob.out
[2025-11-28 00:28:07] -rw-------. 1 boinc boinc    991546 Nov 27 01:46 agis_schedconf.cvmfs.json
[2025-11-28 00:28:07] drwx------. 5 boinc boinc      4096 Nov 27 01:46 pilot3
[2025-11-28 00:28:07] -rw-r--r--. 1 boinc boinc       533 Nov 28 00:06 boinc_task_state.xml
[2025-11-28 00:28:07] -rw-------. 1 boinc boinc 903013997 Nov 28 00:24 HITS.47556149._001490.pool.root.1
[2025-11-28 00:28:07] -rw-------. 1 boinc boinc      1026 Nov 28 00:25 memory_monitor_summary.json
[2025-11-28 00:28:07] -rw-------. 1 boinc boinc   1516240 Nov 28 00:25 agis_ddmendpoints.agis.ALL.json
[2025-11-28 00:28:07] -rw-------. 1 boinc boinc   2425585 Nov 28 00:25 log.47556149._001490.job.log.tgz.1
[2025-11-28 00:28:07] -rw-------. 1 boinc boinc        95 Nov 28 00:27 pilot_heartbeat.json
[2025-11-28 00:28:07] -rw-------. 1 boinc boinc      8638 Nov 28 00:27 heartbeat.json
[2025-11-28 00:28:07] -rw-r--r--. 1 boinc boinc        29 Nov 28 00:27 wrapper_checkpoint.txt
[2025-11-28 00:28:07] -rw-r--r--. 1 boinc boinc      8192 Nov 28 00:27 boinc_mmap_file
[2025-11-28 00:28:07] -rw-------. 1 boinc boinc       819 Nov 28 00:28 pilotlog.txt
[2025-11-28 00:28:07] -rw-------. 1 boinc boinc  10873840 Nov 28 00:28 log.47556149._001490.job.log.1
[2025-11-28 00:28:07] -rw-------. 1 boinc boinc       353 Nov 28 00:28 output.list
[2025-11-28 00:28:07] -rw-r--r--. 1 boinc boinc       620 Nov 28 00:28 runtime_log
[2025-11-28 00:28:07] -rw-------. 1 boinc boinc  13322240 Nov 28 00:28 result.tar.gz
[2025-11-28 00:28:07] -rw-r--r--. 1 boinc boinc      8833 Nov 28 00:28 runtime_log.err
[2025-11-28 00:28:07] -rw-------. 1 boinc boinc       662 Nov 28 00:28 KPaKDmrsOh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmYuKKDm5fyFxm.diag
[2025-11-28 00:28:07] -rw-r--r--. 1 boinc boinc     20993 Nov 28 00:28 stderr.txt
[2025-11-28 00:28:07] HITS file was successfully produced:
[2025-11-28 00:28:07] -rw-------. 1 boinc boinc 903013997 Nov 28 00:24 shared/HITS.pool.root.1
[2025-11-28 00:28:07]  *** Contents of shared directory: ***
[2025-11-28 00:28:07] total 1294032
[2025-11-28 00:28:07] -rw-r--r--. 2 boinc boinc 408134768 Nov 27 01:42 ATLAS.root_0
[2025-11-28 00:28:07] -rw-r--r--. 2 boinc boinc     15847 Nov 27 01:42 start_atlas.sh
[2025-11-28 00:28:07] -rw-r--r--. 2 boinc boinc    590102 Nov 27 01:42 input.tar.gz
[2025-11-28 00:28:07] -rw-------. 1 boinc boinc 903013997 Nov 28 00:24 HITS.pool.root.1
[2025-11-28 00:28:07] -rw-------. 1 boinc boinc  13322240 Nov 28 00:28 result.tar.gz
00:28:09 (317): run_atlas exited; CPU time 308802.557677
00:28:09 (317): called boinc_finish(0)

</stderr_txt>
]]>

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