Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:27:03 (2503506): wrapper (7.7.26015): starting
01:27:03 (2503506): wrapper: running run_atlas (--nthreads 12)
[2025-11-24 01:27:03] Arguments: --nthreads 12
[2025-11-24 01:27:03] Threads: 12
[2025-11-24 01:27:03] Checking for CVMFS
[2025-11-24 01:27:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 01:27:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 01:27:04] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 01:27:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 01:27:05] 2.11.5.0 2081521 25281 212692 153240 0 210 40257037 45568000 14036 130560 0 160074901 99.791 97830412 18834 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-11-24 01:27:05] CVMFS is ok
[2025-11-24 01:27:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 01:27:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 01:27:05] Further information can be found at the LHC@home message board.
[2025-11-24 01:27:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 01:27:05] Checking for apptainer binary...
[2025-11-24 01:27:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 01:27:05] Running /usr/bin/apptainer --version
[2025-11-24 01:27:05] apptainer version 1.4.1-1.el9
[2025-11-24 01:27:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 01:27:07] wns0041.triumf.lcg
[2025-11-24 01:27:07] apptainer works
[2025-11-24 01:27:07] Set ATHENA_PROC_NUMBER=12
[2025-11-24 01:27:07] Set ATHENA_CORE_NUMBER=12
[2025-11-24 01:27:08] Starting ATLAS job with PandaID=6895374018
[2025-11-24 01:27:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 01:33:58]  *** The last 200 lines of the pilot log: ***
[2025-11-24 01:33:58] 2025-11-24 09:33:26,187 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-24 01:33:58] 2025-11-24 09:33:26,198 | WARNING  | wrong length of table data, x=[1763976558.0, 1763976619.0], y=[2007.0, 650353.0] (must be same and length>=4)
[2025-11-24 01:33:58] 2025-11-24 09:33:26,199 | INFO     | could have reported an average CPU frequency of 1263 MHz (4 samples)
[2025-11-24 01:33:58] 2025-11-24 09:33:26,200 | INFO     | ..............................
[2025-11-24 01:33:58] 2025-11-24 09:33:26,200 | INFO     | . Timing measurements:
[2025-11-24 01:33:58] 2025-11-24 09:33:26,200 | INFO     | . get job = 0 s
[2025-11-24 01:33:58] 2025-11-24 09:33:26,200 | INFO     | . initial setup = 7 s
[2025-11-24 01:33:58] 2025-11-24 09:33:26,200 | INFO     | . payload setup = 26 s
[2025-11-24 01:33:58] 2025-11-24 09:33:26,200 | INFO     | . stage-in = 0 s
[2025-11-24 01:33:58] 2025-11-24 09:33:26,200 | INFO     | . payload execution = 125 s
[2025-11-24 01:33:58] 2025-11-24 09:33:26,200 | INFO     | . stage-out = 2 s
[2025-11-24 01:33:58] 2025-11-24 09:33:26,201 | INFO     | . log creation = 0 s
[2025-11-24 01:33:58] 2025-11-24 09:33:26,201 | INFO     | ..............................
[2025-11-24 01:33:58] 2025-11-24 09:33:26,201 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-24 01:33:58] 2025-11-24 09:33:26,201 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6895374018/pilotlog.txt
[2025-11-24 01:33:58] 2025-11-24 09:33:26,238 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-11-24 01:33:58] - Log from pilotlog.txt -
[2025-11-24 01:33:58] 2025-11-24 09:33:26,183 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6895374018/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 01:33:58] 2025-11-24 09:33:26,186 | INFO     | extracted standard info from prmon json
[2025-11-24 01:33:58] 2025-11-24 09:33:26,186 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 01:33:58] 2025-11-24 09:33:26,186 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 01:33:58] 2025-11-24 09:33:26,187 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-24 01:33:58] 2025-11-24 09:33:26,187 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-24 01:33:58] 2025-11-24 09:33:26,198 | WARNING  | wrong length of table data, x=[1763976558.0, 1763976619.0], y=[2007.0, 650353.0] (must be same and length>=4)
[2025-11-24 01:33:58] 2025-11-24 09:33:26,199 | INFO     | could have reported an average CPU frequency of 1263 MHz (4 samples)
[2025-11-24 01:33:58] 2025-11-24 09:33:26,200 | INFO     | ..............................
[2025-11-24 01:33:58] 2025-11-24 09:33:26,200 | INFO     | . Timing measurements:
[2025-11-24 01:33:58] 2025-11-24 09:33:26,200 | INFO     | . get job = 0 s
[2025-11-24 01:33:58] 2025-11-24 09:33:26,200 | INFO     | . initial setup = 7 s
[2025-11-24 01:33:58] 2025-11-24 09:33:26,200 | INFO     | . payload setup = 26 s
[2025-11-24 01:33:58] 2025-11-24 09:33:26,200 | INFO     | . stage-in = 0 s
[2025-11-24 01:33:58] 2025-11-24 09:33:26,200 | INFO     | . payload execution = 125 s
[2025-11-24 01:33:58] 2025-11-24 09:33:26,200 | INFO     | . stage-out = 2 s
[2025-11-24 01:33:58] 2025-11-24 09:33:26,201 | INFO     | . log creation = 0 s
[2025-11-24 01:33:58] 2025-11-24 09:33:26,201 | INFO     | ..............................
[2025-11-24 01:33:58] 2025-11-24 09:33:26,201 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-24 01:33:58] 2025-11-24 09:33:26,201 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6895374018/pilotlog.txt
[2025-11-24 01:33:58] 2025-11-24 09:33:26,239 | WARNING  | 
[2025-11-24 01:33:58] [begin log extracts]
[2025-11-24 01:33:58] - Log from pilotlog.txt -
[2025-11-24 01:33:58] 2025-11-24 09:33:26,183 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6895374018/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 01:33:58] 2025-11-24 09:33:26,186 | INFO     | extracted standard info from prmon json
[2025-11-24 01:33:58] 2025-11-24 09:33:26,186 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 01:33:58] 2025-11-24 09:33:26,186 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 01:33:58] 2025-11-24 09:33:26,187 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-24 01:33:58] 2025-11-24 09:33:26,187 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-24 01:33:58] 2025-11-24 09:33:26,198 | WARNING  | wrong length of table data, x=[1763976558.0, 1763976619.0], y=[2007.0, 650353.0] (must be same and length>=4)
[2025-11-24 01:33:58] 2025-11-24 09:33:26,199 | INFO     | could have reported an average CPU frequency of 1263 MHz (4 samples)
[2025-11-24 01:33:58] 2025-11-24 09:33:26,200 | INFO     | ..............................
[2025-11-24 01:33:58] 2025-11-24 09:33:26,200 | INFO     | . Timing measurements:
[2025-11-24 01:33:58] 2025-11-24 09:33:26,200 | INFO     | . get job = 0 s
[2025-11-24 01:33:58] 2025-11-24 09:33:26,200 | INFO     | . initial setup = 7 s
[2025-11-24 01:33:58] 2025-11-24 09:33:26,200 | INFO     | . payload setup = 26 s
[2025-11-24 01:33:58] 2025-11-24 09:33:26,200 | INFO     | . stage-in = 0 s
[2025-11-24 01:33:58] 2025-11-24 09:33:26,200 | INFO     | . payload execution = 125 s
[2025-11-24 01:33:58] 2025-11-24 09:33:26,200 | INFO     | . stage-out = 2 s
[2025-11-24 01:33:58] 2025-11-24 09:33:26,201 | INFO     | . log creation = 0 s
[2025-11-24 01:33:58] 2025-11-24 09:33:26,201 | INFO     | ..............................
[2025-11-24 01:33:58] 2025-11-24 09:33:26,201 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-24 01:33:58] 2025-11-24 09:33:26,201 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6895374018/pilotlog.txt
[2025-11-24 01:33:58] [end log extracts]
[2025-11-24 01:33:58] 2025-11-24 09:33:26,239 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2025-11-24 01:33:58] 2025-11-24 09:33:26,240 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-11-24 01:33:58] 2025-11-24 09:33:26,359 | INFO     | 
[2025-11-24 01:33:58] 2025-11-24 09:33:26,359 | INFO     | job summary report
[2025-11-24 01:33:58] 2025-11-24 09:33:26,359 | INFO     | --------------------------------------------------
[2025-11-24 01:33:58] 2025-11-24 09:33:26,360 | INFO     | PanDA job id: 6895374018
[2025-11-24 01:33:58] 2025-11-24 09:33:26,360 | INFO     | task id: 47556137
[2025-11-24 01:33:58] 2025-11-24 09:33:26,360 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-11-24 01:30:57,029 CRITICAL Transform executor raised TransformValidationExceptio
[2025-11-24 01:33:58] 2025-11-24 09:33:26,360 | INFO     | error 2/2: 1165: Local output file is missing
[2025-11-24 01:33:58] 2025-11-24 09:33:26,360 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 01:33:58] 2025-11-24 09:33:26,360 | INFO     | pilot state: failed 
[2025-11-24 01:33:58] 2025-11-24 09:33:26,360 | INFO     | transexitcode: 65
[2025-11-24 01:33:58] 2025-11-24 09:33:26,360 | INFO     | exeerrorcode: 65
[2025-11-24 01:33:58] 2025-11-24 09:33:26,360 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFL
[2025-11-24 01:33:58] 2025-11-24 09:33:26,361 | INFO     | exitcode: 65
[2025-11-24 01:33:58] 2025-11-24 09:33:26,361 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 
[2025-11-24 01:33:58] 2025-11-24 09:33:26,361 | INFO     | cpuconsumptiontime: 82 s
[2025-11-24 01:33:58] 2025-11-24 09:33:26,361 | INFO     | nevents: 0
[2025-11-24 01:33:58] 2025-11-24 09:33:26,361 | INFO     | neventsw: 0
[2025-11-24 01:33:58] 2025-11-24 09:33:26,361 | INFO     | pid: 2513951
[2025-11-24 01:33:58] 2025-11-24 09:33:26,361 | INFO     | pgrp: 2513951
[2025-11-24 01:33:58] 2025-11-24 09:33:26,361 | INFO     | corecount: 12
[2025-11-24 01:33:58] 2025-11-24 09:33:26,361 | INFO     | event service: False
[2025-11-24 01:33:58] 2025-11-24 09:33:26,361 | INFO     | sizes: {0: 2297928, 1: 2298781, 2: 2298809, 13: 2298809, 22: 2299127, 24: 2299155, 156: 2324736, 160: 2329026, 163: 2329054, 297: 2329220}
[2025-11-24 01:33:58] 2025-11-24 09:33:26,362 | INFO     | --------------------------------------------------
[2025-11-24 01:33:58] 2025-11-24 09:33:26,362 | INFO     | 
[2025-11-24 01:33:58] 2025-11-24 09:33:26,362 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-11-24 01:33:58] 2025-11-24 09:33:26,515 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 01:33:58] 2025-11-24 09:33:26,515 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 01:33:58] 2025-11-24 09:33:26,516 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 01:33:58] 2025-11-24 09:33:26,516 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 01:33:58] 2025-11-24 09:33:26,516 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 01:33:58] 2025-11-24 09:33:26,516 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 01:33:58] 2025-11-24 09:33:26,516 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 01:33:58] 2025-11-24 09:33:26,516 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 01:33:58] 2025-11-24 09:33:26,516 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 01:33:58] 2025-11-24 09:33:26,516 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 01:33:58] 2025-11-24 09:33:26,517 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 01:33:58] 2025-11-24 09:33:26,517 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 01:33:58] 2025-11-24 09:33:26,517 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 01:33:58] 2025-11-24 09:33:26,517 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 01:33:58] 2025-11-24 09:33:26,517 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 01:33:58] 2025-11-24 09:33:26,517 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 01:33:58] 2025-11-24 09:33:26,517 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 01:33:58] 2025-11-24 09:33:26,517 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 01:33:58] 2025-11-24 09:33:26,518 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 01:33:58] 2025-11-24 09:33:26,518 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 01:33:58] 2025-11-24 09:33:26,518 | INFO     | job 6895374018 has completed (purged errors)
[2025-11-24 01:33:58] 2025-11-24 09:33:26,518 | INFO     | overall cleanup function is called
[2025-11-24 01:33:58] 2025-11-24 09:33:27,528 | INFO     | --- collectZombieJob: --- 10, [2513951]
[2025-11-24 01:33:58] 2025-11-24 09:33:27,528 | INFO     | zombie collector waiting for pid 2513951
[2025-11-24 01:33:58] 2025-11-24 09:33:27,528 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 01:33:58] 2025-11-24 09:33:27,529 | INFO     | collected zombie processes
[2025-11-24 01:33:58] 2025-11-24 09:33:27,529 | INFO     | will attempt to kill all subprocesses of pid=2513951
[2025-11-24 01:33:58] 2025-11-24 09:33:27,905 | INFO     | process IDs to be killed: [2513951] (in reverse order)
[2025-11-24 01:33:58] 2025-11-24 09:33:28,102 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 01:33:58] 2025-11-24 09:33:28,102 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 01:33:58] 2025-11-24 09:33:28,124 | INFO     | did not find any defunct processes belonging to 2513951
[2025-11-24 01:33:58] 2025-11-24 09:33:28,145 | INFO     | did not find any defunct processes belonging to 2513951
[2025-11-24 01:33:58] 2025-11-24 09:33:28,147 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 01:33:58] 2025-11-24 09:33:28,147 | INFO     | ready for new job
[2025-11-24 01:33:58] 2025-11-24 09:33:28,147 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 01:33:58] 2025-11-24 09:33:28,150 | INFO     | ***************************************
[2025-11-24 01:33:58] 2025-11-24 09:33:28,150 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 01:33:58] 2025-11-24 09:33:28,150 | INFO     | ***************************************
[2025-11-24 01:33:58] 2025-11-24 09:33:28,150 | INFO     | 
[2025-11-24 01:33:58] 2025-11-24 09:33:28,154 | INFO     | architecture information:
[2025-11-24 01:33:58] 2025-11-24 09:33:28,158 | INFO     | executing command: cat /etc/os-release
[2025-11-24 01:33:58] 2025-11-24 09:33:28,230 | INFO     | cat /etc/os-release:
[2025-11-24 01:33:58] NAME="CentOS Linux"
[2025-11-24 01:33:58] VERSION="7 (Core)"
[2025-11-24 01:33:58] ID="centos"
[2025-11-24 01:33:58] ID_LIKE="rhel fedora"
[2025-11-24 01:33:58] VERSION_ID="7"
[2025-11-24 01:33:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 01:33:58] ANSI_COLOR="0;31"
[2025-11-24 01:33:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 01:33:58] HOME_URL="https://www.centos.org/"
[2025-11-24 01:33:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 01:33:58] 
[2025-11-24 01:33:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 01:33:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 01:33:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 01:33:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 01:33:58] 
[2025-11-24 01:33:58] 2025-11-24 09:33:28,231 | INFO     | ***************************************
[2025-11-24 01:33:58] 2025-11-24 09:33:28,734 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-11-24 01:33:58] 2025-11-24 09:33:28,755 | INFO     | sufficient remaining disk space (1754821296128 B)
[2025-11-24 01:33:58] 2025-11-24 09:33:28,756 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 01:33:58] 2025-11-24 09:33:28,756 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 01:33:58] 2025-11-24 09:33:28,756 | INFO     | update_server=False
[2025-11-24 01:33:58] 2025-11-24 09:33:28,756 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 01:33:58] 2025-11-24 09:33:28,834 | INFO     | all data control threads have been joined
[2025-11-24 01:33:58] 2025-11-24 09:33:29,220 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 01:33:58] 2025-11-24 09:33:29,220 | INFO     | aborting loop
[2025-11-24 01:33:58] 2025-11-24 09:33:29,232 | INFO     | all payload control threads have been joined
[2025-11-24 01:33:58] 2025-11-24 09:33:29,242 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 01:33:58] 2025-11-24 09:33:29,727 | INFO     | all job control threads have been joined
[2025-11-24 01:33:58] 2025-11-24 09:33:29,762 | INFO     | [job] retrieve thread has finished
[2025-11-24 01:33:58] 2025-11-24 09:33:29,799 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 01:33:58] 2025-11-24 09:33:29,840 | INFO     | [data] control thread has finished
[2025-11-24 01:33:58] 2025-11-24 09:33:30,156 | INFO     | [payload] failed_post thread has finished
[2025-11-24 01:33:58] 2025-11-24 09:33:30,225 | INFO     | [job] job monitor thread has finished
[2025-11-24 01:33:58] 2025-11-24 09:33:30,237 | INFO     | [payload] control thread has finished
[2025-11-24 01:33:58] 2025-11-24 09:33:30,279 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 01:33:58] 2025-11-24 09:33:30,405 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 01:33:58] 2025-11-24 09:33:30,732 | INFO     | [job] control thread has finished
[2025-11-24 01:33:58] 2025-11-24 09:33:30,766 | INFO     | [job] validate thread has finished
[2025-11-24 01:33:58] 2025-11-24 09:33:30,767 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 01:33:58] 2025-11-24 09:33:30,791 | INFO     | [payload] validate_post thread has finished
[2025-11-24 01:33:58] 2025-11-24 09:33:30,962 | INFO     | [data] copytool_in thread has finished
[2025-11-24 01:33:58] 2025-11-24 09:33:31,016 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 01:33:58] 2025-11-24 09:33:31,371 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 01:33:58] 2025-11-24 09:33:31,805 | INFO     | [data] copytool_out thread has finished
[2025-11-24 01:33:58] 2025-11-24 09:33:32,377 | INFO     | [job] queue monitor thread has finished
[2025-11-24 01:33:58] 2025-11-24 09:33:33,251 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 01:33:58] 2025-11-24 09:33:41,936 | INFO     | [monitor] cgroup control has ended
[2025-11-24 01:33:58] 2025-11-24 09:33:42,947 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140244831430464)>', '<ExcThread(monitor, started 140244162701056)>']
[2025-11-24 01:33:58] 2025-11-24 09:33:47,974 | INFO     | all workflow threads have been joined
[2025-11-24 01:33:58] 2025-11-24 09:33:47,974 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 01:33:58] 2025-11-24 09:33:47,975 | INFO     | traces error code: 0
[2025-11-24 01:33:58] 2025-11-24 09:33:47,975 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 01:33:58] 2025-11-24 09:33:58,581 | INFO     | PID=2507256 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-24 01:33:58] 2025-11-24 09:33:58,582 | INFO     | .. there are 19 such processes running
[2025-11-24 01:33:58] 2025-11-24 09:33:58,583 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 01:33:58] 2025-11-24 09:33:58,583 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 01:33:58] 2025-11-24 09:33:58,583 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 01:33:58] 2025-11-24 09:33:58,583 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 01:33:58] 2025-11-24 09:33:58,583 | INFO     | [monitor] control thread has ended
[2025-11-24 01:33:58] 2025-11-24 09:33:58,753 [wrapper] ==== pilot stdout END ====
[2025-11-24 01:33:58] 2025-11-24 09:33:58,757 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 01:33:58] 2025-11-24 09:33:58,760 [wrapper] pilotpid: 2507256
[2025-11-24 01:33:58] 2025-11-24 09:33:58,764 [wrapper] Pilot exit status: 0
[2025-11-24 01:33:58] 2025-11-24 09:33:58,780 [wrapper] pandaids: 6895374018
[2025-11-24 01:33:58] 2025-11-24 09:33:58,852 [wrapper] cleanup supervisor_pilot 2507262 2507257
[2025-11-24 01:33:58] 2025-11-24 09:33:58,857 [wrapper] Test setup, not cleaning
[2025-11-24 01:33:58] 2025-11-24 09:33:58,861 [wrapper] apfmon messages muted
[2025-11-24 01:33:58] 2025-11-24 09:33:58,865 [wrapper] ==== wrapper stdout END ====
[2025-11-24 01:33:58] 2025-11-24 09:33:58,869 [wrapper] ==== wrapper stderr END ====
[2025-11-24 01:33:58]  *** Error codes and diagnostics ***
[2025-11-24 01:33:58]     "exeErrorCode": 65,
[2025-11-24 01:33:58]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 cannot be opened - STOP\"",
[2025-11-24 01:33:58]     "pilotErrorCode": 1305,
[2025-11-24 01:33:58]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 canno",
[2025-11-24 01:33:58]  *** Listing of results directory ***
[2025-11-24 01:33:58] total 404816
[2025-11-24 01:33:58] -rw-r--r--. 1 boinc boinc    576529 Nov 23 14:35 pilot3.tar.gz
[2025-11-24 01:33:58] -rw-r--r--. 1 boinc boinc      5112 Nov 23 14:41 queuedata.json
[2025-11-24 01:33:58] -rwx------. 1 boinc boinc     36292 Nov 23 14:42 runpilot2-wrapper.sh
[2025-11-24 01:33:58] -rw-r--r--. 1 boinc boinc       100 Nov 24 01:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 01:33:58] -rwxr-xr-x. 1 boinc boinc      7986 Nov 24 01:27 run_atlas
[2025-11-24 01:33:58] -rw-r--r--. 1 boinc boinc       105 Nov 24 01:27 job.xml
[2025-11-24 01:33:58] -rw-r--r--. 1 boinc boinc      6595 Nov 24 01:27 init_data.xml
[2025-11-24 01:33:58] -rw-r--r--. 2 boinc boinc 410295822 Nov 24 01:27 EVNT.47483658._000931.pool.root.1
[2025-11-24 01:33:58] -rw-r--r--. 2 boinc boinc     15847 Nov 24 01:27 start_atlas.sh
[2025-11-24 01:33:58] drwxrwx--x. 2 boinc boinc      4096 Nov 24 01:27 shared
[2025-11-24 01:33:58] -rw-r--r--. 2 boinc boinc    590105 Nov 24 01:27 input.tar.gz
[2025-11-24 01:33:58] -rw-r--r--. 1 boinc boinc         0 Nov 24 01:27 boinc_lockfile
[2025-11-24 01:33:58] -rw-r--r--. 1 boinc boinc      2785 Nov 24 01:27 pandaJob.out
[2025-11-24 01:33:58] -rw-------. 1 boinc boinc    989824 Nov 24 01:27 agis_schedconf.cvmfs.json
[2025-11-24 01:33:58] -rw-------. 1 boinc boinc   1526164 Nov 24 01:27 agis_ddmendpoints.agis.ALL.json
[2025-11-24 01:33:58] drwx------. 5 boinc boinc      4096 Nov 24 01:27 pilot3
[2025-11-24 01:33:58] -rw-r--r--. 1 boinc boinc       525 Nov 24 01:30 boinc_task_state.xml
[2025-11-24 01:33:58] -rw-------. 1 boinc boinc       992 Nov 24 01:31 memory_monitor_summary.json
[2025-11-24 01:33:58] -rw-------. 1 boinc boinc     49782 Nov 24 01:31 log.47556137._009176.job.log.tgz.1
[2025-11-24 01:33:58] -rw-------. 1 boinc boinc     10339 Nov 24 01:33 heartbeat.json
[2025-11-24 01:33:58] -rw-r--r--. 1 boinc boinc      8192 Nov 24 01:33 boinc_mmap_file
[2025-11-24 01:33:58] -rw-r--r--. 1 boinc boinc        23 Nov 24 01:33 wrapper_checkpoint.txt
[2025-11-24 01:33:58] -rw-------. 1 boinc boinc        95 Nov 24 01:33 pilot_heartbeat.json
[2025-11-24 01:33:58] -rw-------. 1 boinc boinc       823 Nov 24 01:33 pilotlog.txt
[2025-11-24 01:33:58] -rw-------. 1 boinc boinc    109010 Nov 24 01:33 log.47556137._009176.job.log.1
[2025-11-24 01:33:58] -rw-------. 1 boinc boinc       186 Nov 24 01:33 output.list
[2025-11-24 01:33:58] -rw-r--r--. 1 boinc boinc       620 Nov 24 01:33 runtime_log
[2025-11-24 01:33:58] -rw-------. 1 boinc boinc    184320 Nov 24 01:33 result.tar.gz
[2025-11-24 01:33:58] -rw-------. 1 boinc boinc       644 Nov 24 01:33 ZCDLDmsxXh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmEoIKDm5AC0mm.diag
[2025-11-24 01:33:58] -rw-r--r--. 1 boinc boinc      8636 Nov 24 01:33 runtime_log.err
[2025-11-24 01:33:58] -rw-r--r--. 1 boinc boinc     22512 Nov 24 01:33 stderr.txt
[2025-11-24 01:33:59] No HITS result produced
[2025-11-24 01:33:59]  *** Contents of shared directory: ***
[2025-11-24 01:33:59] total 401460
[2025-11-24 01:33:59] -rw-r--r--. 2 boinc boinc 410295822 Nov 24 01:27 ATLAS.root_0
[2025-11-24 01:33:59] -rw-r--r--. 2 boinc boinc     15847 Nov 24 01:27 start_atlas.sh
[2025-11-24 01:33:59] -rw-r--r--. 2 boinc boinc    590105 Nov 24 01:27 input.tar.gz
[2025-11-24 01:33:59] -rw-------. 1 boinc boinc    184320 Nov 24 01:33 result.tar.gz
01:34:00 (2503506): run_atlas exited; CPU time 81.471077
01:34:00 (2503506): called boinc_finish(0)

</stderr_txt>
]]>

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