Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
04:18:52 (32087): wrapper (7.7.26015): starting
04:18:52 (32087): wrapper: running run_atlas (--nthreads 12)
[2025-11-24 04:18:52] Arguments: --nthreads 12
[2025-11-24 04:18:52] Threads: 12
[2025-11-24 04:18:52] Checking for CVMFS
[2025-11-24 04:18:52] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 04:18:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 04:18:52] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 04:18:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 04:18:52] 2.11.2.0 3009 69879 94260 153240 1 58 13285323 20275200 1 130560 0 28636733 99.911 3694873 34388 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-24 04:18:52] CVMFS is ok
[2025-11-24 04:18:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 04:18:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 04:18:52] Further information can be found at the LHC@home message board.
[2025-11-24 04:18:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 04:18:52] Checking for apptainer binary...
[2025-11-24 04:18:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 04:18:52] Running /usr/bin/apptainer --version
[2025-11-24 04:18:52] apptainer version 1.3.2-1.el7
[2025-11-24 04:18:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 04:18:54] c-115-42.aglt2.org
[2025-11-24 04:18:54] apptainer works
[2025-11-24 04:18:54] Set ATHENA_PROC_NUMBER=12
[2025-11-24 04:18:54] Set ATHENA_CORE_NUMBER=12
[2025-11-24 04:18:54] Starting ATLAS job with PandaID=6895358842
[2025-11-24 04:18:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 10:46:51]  *** The last 200 lines of the pilot log: ***
[2025-11-24 10:46:51] 2025-11-24 15:45:42,644 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 10:46:51] 2025-11-24 15:45:44,489 | INFO     | time since job start (23196s) is within the limit (172800.0s)
[2025-11-24 10:46:51] 2025-11-24 15:45:45,147 | INFO     | monitor loop #1736: job 0:6895358842 is in state 'finished'
[2025-11-24 10:46:51] 2025-11-24 15:45:45,147 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 10:46:51] 2025-11-24 15:45:45,953 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-24 10:46:51] 2025-11-24 15:45:45,957 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1706.9166666666667
[2025-11-24 10:46:51] 2025-11-24 15:45:45,958 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895358842/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 10:46:51] 2025-11-24 15:45:45,959 | INFO     | extracted standard info from prmon json
[2025-11-24 10:46:51] 2025-11-24 15:45:45,959 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 10:46:51] 2025-11-24 15:45:45,959 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 10:46:51] 2025-11-24 15:45:45,964 | INFO     | fitting pss+swap vs Time
[2025-11-24 10:46:51] 2025-11-24 15:45:45,965 | INFO     | sum of square deviations: 17014682229.881638
[2025-11-24 10:46:51] 2025-11-24 15:45:45,968 | INFO     | sum of deviations: 233839127388.52637
[2025-11-24 10:46:51] 2025-11-24 15:45:45,968 | INFO     | mean x: 1763987536.6710527
[2025-11-24 10:46:51] 2025-11-24 15:45:45,968 | INFO     | mean y: 4071456.484210526
[2025-11-24 10:46:51] 2025-11-24 15:45:45,968 | INFO     | intersect: -24239067541.138115
[2025-11-24 10:46:51] 2025-11-24 15:45:45,968 | INFO     | chi2: 5.601414135580286
[2025-11-24 10:46:51] 2025-11-24 15:45:45,969 | INFO     | sum of square deviations: 16351861719.733284
[2025-11-24 10:46:51] 2025-11-24 15:45:45,972 | INFO     | sum of deviations: 404085591129.0802
[2025-11-24 10:46:51] 2025-11-24 15:45:45,972 | INFO     | mean x: 1763987384.1733334
[2025-11-24 10:46:51] 2025-11-24 15:45:45,972 | INFO     | mean y: 4110588.368
[2025-11-24 10:46:51] 2025-11-24 15:45:45,972 | INFO     | intersect: -43587371353.88193
[2025-11-24 10:46:51] 2025-11-24 15:45:45,972 | INFO     | chi2: 2.7320843412640103
[2025-11-24 10:46:51] 2025-11-24 15:45:45,973 | INFO     | current chi2=2.7320843412640103 (change=51.22509646430603 %)
[2025-11-24 10:46:51] 2025-11-24 15:45:45,973 | INFO     | sum of square deviations: 15706460643.429726
[2025-11-24 10:46:51] 2025-11-24 15:45:45,976 | INFO     | sum of deviations: 436415601091.91644
[2025-11-24 10:46:51] 2025-11-24 15:45:45,976 | INFO     | mean x: 1763987231.672973
[2025-11-24 10:46:51] 2025-11-24 15:45:45,976 | INFO     | mean y: 4118149.3216216215
[2025-11-24 10:46:51] 2025-11-24 15:45:45,976 | INFO     | intersect: -49009568989.10185
[2025-11-24 10:46:51] 2025-11-24 15:45:45,977 | INFO     | chi2: 2.3672510780308293
[2025-11-24 10:46:51] 2025-11-24 15:45:45,977 | INFO     | current chi2=2.3672510780308293 (change=13.35366034360379 %)
[2025-11-24 10:46:51] 2025-11-24 15:45:45,977 | INFO     | right removable region: 369
[2025-11-24 10:46:51] 2025-11-24 15:45:45,977 | INFO     | sum of square deviations: 16351822069.733288
[2025-11-24 10:46:51] 2025-11-24 15:45:45,980 | INFO     | sum of deviations: 95116596354.54678
[2025-11-24 10:46:51] 2025-11-24 15:45:45,980 | INFO     | mean x: 1763987689.1733334
[2025-11-24 10:46:51] 2025-11-24 15:45:45,980 | INFO     | mean y: 4103240.3146666666
[2025-11-24 10:46:51] 2025-11-24 15:45:45,981 | INFO     | intersect: -10256802504.009298
[2025-11-24 10:46:51] 2025-11-24 15:45:45,981 | INFO     | chi2: 3.3592111987023383
[2025-11-24 10:46:51] 2025-11-24 15:45:45,981 | INFO     | current chi2=3.3592111987023383 (change=40.02922980886975 %)
[2025-11-24 10:46:51] 2025-11-24 15:45:45,982 | INFO     | sum of square deviations: 15706404097.08106
[2025-11-24 10:46:51] 2025-11-24 15:45:45,984 | INFO     | sum of deviations: 65759093375.94591
[2025-11-24 10:46:51] 2025-11-24 15:45:45,984 | INFO     | mean x: 1763987841.6756756
[2025-11-24 10:46:51] 2025-11-24 15:45:45,984 | INFO     | mean y: 4110165.8162162164
[2025-11-24 10:46:51] 2025-11-24 15:45:45,985 | INFO     | intersect: -7381300299.736596
[2025-11-24 10:46:51] 2025-11-24 15:45:45,985 | INFO     | chi2: 3.309051535066086
[2025-11-24 10:46:51] 2025-11-24 15:45:45,985 | INFO     | current chi2=3.309051535066086 (change=1.4931976785392094 %)
[2025-11-24 10:46:51] 2025-11-24 15:45:45,985 | INFO     | left removable region: 20
[2025-11-24 10:46:51] 2025-11-24 15:45:45,986 | INFO     | sum of square deviations: 13181000708.338135
[2025-11-24 10:46:51] 2025-11-24 15:45:45,988 | INFO     | sum of deviations: 233177698444.6333
[2025-11-24 10:46:51] 2025-11-24 15:45:45,988 | INFO     | mean x: 1763987811.1747851
[2025-11-24 10:46:51] 2025-11-24 15:45:45,988 | INFO     | mean y: 4167273.776504298
[2025-11-24 10:46:51] 2025-11-24 15:45:45,988 | INFO     | intersect: -31201552761.874905
[2025-11-24 10:46:51] 2025-11-24 15:45:45,989 | INFO     | chi2: 0.016265613710186904
[2025-11-24 10:46:51] 2025-11-24 15:45:45,989 | INFO     | current memory leak: 17.69 B/s (using 349 data points, chi2=0.02)
[2025-11-24 10:46:51] 2025-11-24 15:45:45,989 | INFO     | could have reported an average CPU frequency of 2618 MHz (16 samples)
[2025-11-24 10:46:51] 2025-11-24 15:45:45,989 | INFO     | ..............................
[2025-11-24 10:46:51] 2025-11-24 15:45:45,990 | INFO     | . Timing measurements:
[2025-11-24 10:46:51] 2025-11-24 15:45:45,990 | INFO     | . get job = 0 s
[2025-11-24 10:46:51] 2025-11-24 15:45:45,990 | INFO     | . initial setup = 2 s
[2025-11-24 10:46:51] 2025-11-24 15:45:45,990 | INFO     | . payload setup = 7 s
[2025-11-24 10:46:51] 2025-11-24 15:45:45,990 | INFO     | . stage-in = 0 s
[2025-11-24 10:46:51] 2025-11-24 15:45:45,990 | INFO     | . payload execution = 23160 s
[2025-11-24 10:46:51] 2025-11-24 15:45:45,990 | INFO     | . stage-out = 3 s
[2025-11-24 10:46:51] 2025-11-24 15:45:45,990 | INFO     | . log creation = 0 s
[2025-11-24 10:46:51] 2025-11-24 15:45:45,990 | INFO     | ..............................
[2025-11-24 10:46:51] 2025-11-24 15:45:46,223 | INFO     | 
[2025-11-24 10:46:51] 2025-11-24 15:45:46,224 | INFO     | job summary report
[2025-11-24 10:46:51] 2025-11-24 15:45:46,224 | INFO     | --------------------------------------------------
[2025-11-24 10:46:51] 2025-11-24 15:45:46,224 | INFO     | PanDA job id: 6895358842
[2025-11-24 10:46:51] 2025-11-24 15:45:46,224 | INFO     | task id: 47556137
[2025-11-24 10:46:51] 2025-11-24 15:45:46,224 | INFO     | errors: (none)
[2025-11-24 10:46:51] 2025-11-24 15:45:46,225 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 10:46:51] 2025-11-24 15:45:46,225 | INFO     | pilot state: finished 
[2025-11-24 10:46:51] 2025-11-24 15:45:46,225 | INFO     | transexitcode: 0
[2025-11-24 10:46:51] 2025-11-24 15:45:46,225 | INFO     | exeerrorcode: 0
[2025-11-24 10:46:51] 2025-11-24 15:45:46,225 | INFO     | exeerrordiag: 
[2025-11-24 10:46:51] 2025-11-24 15:45:46,225 | INFO     | exitcode: 0
[2025-11-24 10:46:51] 2025-11-24 15:45:46,225 | INFO     | exitmsg: OK
[2025-11-24 10:46:51] 2025-11-24 15:45:46,226 | INFO     | cpuconsumptiontime: 267241 s
[2025-11-24 10:46:51] 2025-11-24 15:45:46,226 | INFO     | nevents: 1000
[2025-11-24 10:46:51] 2025-11-24 15:45:46,226 | INFO     | neventsw: 0
[2025-11-24 10:46:51] 2025-11-24 15:45:46,226 | INFO     | pid: 9970
[2025-11-24 10:46:51] 2025-11-24 15:45:46,226 | INFO     | pgrp: 9970
[2025-11-24 10:46:51] 2025-11-24 15:45:46,226 | INFO     | corecount: 12
[2025-11-24 10:46:51] 2025-11-24 15:45:46,226 | INFO     | event service: False
[2025-11-24 10:46:51] 2025-11-24 15:45:46,227 | INFO     | sizes: {0: 2298636, 1: 2298835, 5: 2299097, 11: 2299153, 23171: 2335001, 23174: 2344786, 23176: 2344970, 23181: 2345216}
[2025-11-24 10:46:51] 2025-11-24 15:45:46,227 | INFO     | --------------------------------------------------
[2025-11-24 10:46:51] 2025-11-24 15:45:46,227 | INFO     | 
[2025-11-24 10:46:51] 2025-11-24 15:45:46,227 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-24 10:46:51] 2025-11-24 15:45:46,252 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 10:46:51] 2025-11-24 15:45:46,252 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 10:46:51] 2025-11-24 15:45:46,252 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 10:46:51] 2025-11-24 15:45:46,252 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 10:46:51] 2025-11-24 15:45:46,252 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 10:46:51] 2025-11-24 15:45:46,253 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 10:46:51] 2025-11-24 15:45:46,253 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 10:46:51] 2025-11-24 15:45:46,253 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 10:46:51] 2025-11-24 15:45:46,253 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 10:46:51] 2025-11-24 15:45:46,253 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 10:46:51] 2025-11-24 15:45:46,254 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 10:46:51] 2025-11-24 15:45:46,254 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 10:46:51] 2025-11-24 15:45:46,254 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 10:46:51] 2025-11-24 15:45:46,254 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 10:46:51] 2025-11-24 15:45:46,254 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 10:46:51] 2025-11-24 15:45:46,254 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 10:46:51] 2025-11-24 15:45:46,255 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 10:46:51] 2025-11-24 15:45:46,255 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 10:46:51] 2025-11-24 15:45:46,255 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 10:46:51] 2025-11-24 15:45:46,255 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 10:46:51] 2025-11-24 15:45:46,255 | INFO     | job 6895358842 has completed (purged errors)
[2025-11-24 10:46:51] 2025-11-24 15:45:46,256 | INFO     | overall cleanup function is called
[2025-11-24 10:46:51] 2025-11-24 15:45:47,272 | INFO     | --- collectZombieJob: --- 10, [9970]
[2025-11-24 10:46:51] 2025-11-24 15:45:47,272 | INFO     | zombie collector waiting for pid 9970
[2025-11-24 10:46:51] 2025-11-24 15:45:47,272 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 10:46:51] 2025-11-24 15:45:47,273 | INFO     | collected zombie processes
[2025-11-24 10:46:51] 2025-11-24 15:45:47,273 | INFO     | will attempt to kill all subprocesses of pid=9970
[2025-11-24 10:46:51] 2025-11-24 15:45:47,363 | INFO     | process IDs to be killed: [9970] (in reverse order)
[2025-11-24 10:46:51] 2025-11-24 15:45:47,417 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 10:46:51] 2025-11-24 15:45:47,417 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 10:46:51] 2025-11-24 15:45:47,421 | INFO     | did not find any defunct processes belonging to 9970
[2025-11-24 10:46:51] 2025-11-24 15:45:47,424 | INFO     | did not find any defunct processes belonging to 9970
[2025-11-24 10:46:51] 2025-11-24 15:45:47,426 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 10:46:51] 2025-11-24 15:45:47,427 | INFO     | ready for new job
[2025-11-24 10:46:51] 2025-11-24 15:45:47,427 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 10:46:51] 2025-11-24 15:45:47,428 | INFO     | ***************************************
[2025-11-24 10:46:51] 2025-11-24 15:45:47,429 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 10:46:51] 2025-11-24 15:45:47,429 | INFO     | ***************************************
[2025-11-24 10:46:51] 2025-11-24 15:45:47,429 | INFO     | 
[2025-11-24 10:46:51] 2025-11-24 15:45:47,429 | INFO     | architecture information:
[2025-11-24 10:46:51] 2025-11-24 15:45:47,430 | INFO     | executing command: cat /etc/os-release
[2025-11-24 10:46:51] 2025-11-24 15:45:47,446 | INFO     | cat /etc/os-release:
[2025-11-24 10:46:51] NAME="CentOS Linux"
[2025-11-24 10:46:51] VERSION="7 (Core)"
[2025-11-24 10:46:51] ID="centos"
[2025-11-24 10:46:51] ID_LIKE="rhel fedora"
[2025-11-24 10:46:51] VERSION_ID="7"
[2025-11-24 10:46:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 10:46:51] ANSI_COLOR="0;31"
[2025-11-24 10:46:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 10:46:51] HOME_URL="https://www.centos.org/"
[2025-11-24 10:46:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 10:46:51] 
[2025-11-24 10:46:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 10:46:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 10:46:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 10:46:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 10:46:51] 
[2025-11-24 10:46:51] 2025-11-24 15:45:47,447 | INFO     | ***************************************
[2025-11-24 10:46:51] 2025-11-24 15:45:47,949 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-24 10:46:51] 2025-11-24 15:45:47,967 | INFO     | sufficient remaining disk space (17468227584 B)
[2025-11-24 10:46:51] 2025-11-24 15:45:47,967 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 10:46:51] 2025-11-24 15:45:47,968 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 10:46:51] 2025-11-24 15:45:47,968 | INFO     | update_server=False
[2025-11-24 10:46:51] 2025-11-24 15:45:47,968 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 10:46:51] 2025-11-24 15:45:47,968 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 10:46:51] 2025-11-24 15:45:47,969 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 10:46:51] 2025-11-24 15:45:48,656 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 10:46:51] 2025-11-24 15:45:48,656 | INFO     | all payload control threads have been joined
[2025-11-24 10:46:51] 2025-11-24 15:45:48,656 | INFO     | aborting loop
[2025-11-24 10:46:51] 2025-11-24 15:45:48,867 | INFO     | all job control threads have been joined
[2025-11-24 10:46:51] 2025-11-24 15:45:48,974 | INFO     | [job] retrieve thread has finished
[2025-11-24 10:46:51] 2025-11-24 15:45:48,974 | INFO     | [job] queue monitor thread has finished
[2025-11-24 10:46:51] 2025-11-24 15:45:49,040 | INFO     | all data control threads have been joined
[2025-11-24 10:46:51] 2025-11-24 15:45:49,248 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 10:46:51] 2025-11-24 15:45:49,317 | INFO     | [data] copytool_in thread has finished
[2025-11-24 10:46:51] 2025-11-24 15:45:49,658 | INFO     | [job] job monitor thread has finished
[2025-11-24 10:46:51] 2025-11-24 15:45:49,659 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 10:46:51] 2025-11-24 15:45:49,662 | INFO     | [payload] control thread has finished
[2025-11-24 10:46:51] 2025-11-24 15:45:49,683 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 10:46:51] 2025-11-24 15:45:49,709 | INFO     | [payload] validate_post thread has finished
[2025-11-24 10:46:51] 2025-11-24 15:45:49,771 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 10:46:51] 2025-11-24 15:45:49,873 | INFO     | [job] control thread has finished
[2025-11-24 10:46:51] 2025-11-24 15:45:49,974 | INFO     | [data] copytool_out thread has finished
[2025-11-24 10:46:51] 2025-11-24 15:45:49,987 | INFO     | [job] validate thread has finished
[2025-11-24 10:46:51] 2025-11-24 15:45:50,043 | INFO     | [data] control thread has finished
[2025-11-24 10:46:51] 2025-11-24 15:45:50,192 | INFO     | [payload] failed_post thread has finished
[2025-11-24 10:46:51] 2025-11-24 15:45:51,200 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 10:46:51] 2025-11-24 15:45:55,205 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 10:46:51] 2025-11-24 15:46:17,669 | INFO     | PID=3547 has CPU usage=5.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-24 10:46:51] 2025-11-24 15:46:17,669 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 10:46:51] 2025-11-24 15:46:17,669 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 10:46:51] 2025-11-24 15:46:17,669 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 10:46:51] 2025-11-24 15:46:46,213 | INFO     | [monitor] cgroup control has ended
[2025-11-24 10:46:51] 2025-11-24 15:46:46,334 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140568054105920)>', '<ExcThread(monitor, started 140566964729600)>']
[2025-11-24 10:46:51] 2025-11-24 15:46:46,798 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 10:46:51] 2025-11-24 15:46:46,798 | INFO     | [monitor] control thread has ended
[2025-11-24 10:46:51] 2025-11-24 15:46:51,337 | INFO     | all workflow threads have been joined
[2025-11-24 10:46:51] 2025-11-24 15:46:51,337 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 10:46:51] 2025-11-24 15:46:51,340 | INFO     | traces error code: 0
[2025-11-24 10:46:51] 2025-11-24 15:46:51,340 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 10:46:51] 2025-11-24 15:46:51,434 [wrapper] ==== pilot stdout END ====
[2025-11-24 10:46:51] 2025-11-24 15:46:51,437 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 10:46:51] 2025-11-24 15:46:51,441 [wrapper] pilotpid: 3547
[2025-11-24 10:46:51] 2025-11-24 15:46:51,445 [wrapper] Pilot exit status: 0
[2025-11-24 10:46:51] 2025-11-24 15:46:51,460 [wrapper] pandaids: 6895358842
[2025-11-24 10:46:51] 2025-11-24 15:46:51,503 [wrapper] cleanup supervisor_pilot 26438 3548
[2025-11-24 10:46:51] 2025-11-24 15:46:51,508 [wrapper] Test setup, not cleaning
[2025-11-24 10:46:51] 2025-11-24 15:46:51,511 [wrapper] apfmon messages muted
[2025-11-24 10:46:51] 2025-11-24 15:46:51,516 [wrapper] ==== wrapper stdout END ====
[2025-11-24 10:46:51] 2025-11-24 15:46:51,519 [wrapper] ==== wrapper stderr END ====
[2025-11-24 10:46:51]  *** Error codes and diagnostics ***
[2025-11-24 10:46:51]     "exeErrorCode": 0,
[2025-11-24 10:46:51]     "exeErrorDiag": "",
[2025-11-24 10:46:51]     "pilotErrorCode": 0,
[2025-11-24 10:46:51]     "pilotErrorDiag": "",
[2025-11-24 10:46:51]  *** Listing of results directory ***
[2025-11-24 10:46:51] total 1316580
[2025-11-24 10:46:51] -rw-r--r-- 1 boincer umatlas    576529 Nov 23 07:50 pilot3.tar.gz
[2025-11-24 10:46:51] -rw-r--r-- 1 boincer umatlas      5112 Nov 23 08:03 queuedata.json
[2025-11-24 10:46:51] -rwx------ 1 boincer umatlas     36292 Nov 23 08:04 runpilot2-wrapper.sh
[2025-11-24 10:46:51] -rw-r--r-- 1 boincer umatlas       100 Nov 24 04:18 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 10:46:51] -rwxr-xr-x 1 boincer umatlas      7986 Nov 24 04:18 run_atlas
[2025-11-24 10:46:51] -rw-r--r-- 1 boincer umatlas       105 Nov 24 04:18 job.xml
[2025-11-24 10:46:51] -rw-r--r-- 2 boincer umatlas 409326742 Nov 24 04:18 EVNT.47483658._000739.pool.root.1
[2025-11-24 10:46:51] -rw-r--r-- 2 boincer umatlas     15847 Nov 24 04:18 start_atlas.sh
[2025-11-24 10:46:51] drwxrwx--x 2 boincer umatlas      4096 Nov 24 04:18 shared
[2025-11-24 10:46:51] -rw-r--r-- 2 boincer umatlas    590098 Nov 24 04:18 input.tar.gz
[2025-11-24 10:46:51] -rw-r--r-- 1 boincer umatlas         0 Nov 24 04:18 boinc_lockfile
[2025-11-24 10:46:51] -rw-r--r-- 1 boincer umatlas      2786 Nov 24 04:18 pandaJob.out
[2025-11-24 10:46:51] -rw------- 1 boincer umatlas        57 Nov 24 04:18 setup.sh.local
[2025-11-24 10:46:51] -rw------- 1 boincer umatlas    989824 Nov 24 04:19 agis_schedconf.cvmfs.json
[2025-11-24 10:46:51] drwx------ 5 boincer umatlas      4096 Nov 24 04:19 pilot3
[2025-11-24 10:46:51] -rw-r--r-- 1 boincer umatlas       533 Nov 24 10:37 boinc_task_state.xml
[2025-11-24 10:46:51] -rw-r--r-- 1 boincer umatlas      5955 Nov 24 10:39 init_data.xml
[2025-11-24 10:46:51] -rw------- 1 boincer umatlas 924162056 Nov 24 10:45 HITS.47556137._007343.pool.root.1
[2025-11-24 10:46:51] -rw------- 1 boincer umatlas      1062 Nov 24 10:45 memory_monitor_summary.json
[2025-11-24 10:46:51] -rw------- 1 boincer umatlas   1516227 Nov 24 10:45 agis_ddmendpoints.agis.ALL.json
[2025-11-24 10:46:51] -rw------- 1 boincer umatlas   2144528 Nov 24 10:45 log.47556137._007343.job.log.tgz.1
[2025-11-24 10:46:51] -rw------- 1 boincer umatlas      8665 Nov 24 10:45 heartbeat.json
[2025-11-24 10:46:51] -rw------- 1 boincer umatlas        95 Nov 24 10:46 pilot_heartbeat.json
[2025-11-24 10:46:51] -rw-r--r-- 1 boincer umatlas      8192 Nov 24 10:46 boinc_mmap_file
[2025-11-24 10:46:51] -rw-r--r-- 1 boincer umatlas        29 Nov 24 10:46 wrapper_checkpoint.txt
[2025-11-24 10:46:51] -rw------- 1 boincer umatlas      4745 Nov 24 10:46 pilotlog.txt
[2025-11-24 10:46:51] -rw------- 1 boincer umatlas   3239749 Nov 24 10:46 log.47556137._007343.job.log.1
[2025-11-24 10:46:51] -rw------- 1 boincer umatlas       353 Nov 24 10:46 output.list
[2025-11-24 10:46:51] -rw-r--r-- 1 boincer umatlas       620 Nov 24 10:46 runtime_log
[2025-11-24 10:46:51] -rw------- 1 boincer umatlas   5406720 Nov 24 10:46 result.tar.gz
[2025-11-24 10:46:51] -rw-r--r-- 1 boincer umatlas      9345 Nov 24 10:46 runtime_log.err
[2025-11-24 10:46:51] -rw------- 1 boincer umatlas       669 Nov 24 10:46 flPKDmFwOh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmmuKKDmU57i3n.diag
[2025-11-24 10:46:51] -rw-r--r-- 1 boincer umatlas     21340 Nov 24 10:46 stderr.txt
[2025-11-24 10:46:51] HITS file was successfully produced:
[2025-11-24 10:46:51] -rw------- 1 boincer umatlas 924162056 Nov 24 10:45 shared/HITS.pool.root.1
[2025-11-24 10:46:51]  *** Contents of shared directory: ***
[2025-11-24 10:46:51] total 1308124
[2025-11-24 10:46:51] -rw-r--r-- 2 boincer umatlas 409326742 Nov 24 04:18 ATLAS.root_0
[2025-11-24 10:46:51] -rw-r--r-- 2 boincer umatlas     15847 Nov 24 04:18 start_atlas.sh
[2025-11-24 10:46:51] -rw-r--r-- 2 boincer umatlas    590098 Nov 24 04:18 input.tar.gz
[2025-11-24 10:46:51] -rw------- 1 boincer umatlas 924162056 Nov 24 10:45 HITS.pool.root.1
[2025-11-24 10:46:51] -rw------- 1 boincer umatlas   5406720 Nov 24 10:46 result.tar.gz
10:46:53 (32087): run_atlas exited; CPU time 263482.320535
10:46:53 (32087): called boinc_finish(0)

</stderr_txt>
]]>

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