Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
04:22:33 (874): wrapper (7.7.26015): starting
04:22:33 (874): wrapper: running run_atlas (--nthreads 8)
[2025-11-24 04:22:33] Arguments: --nthreads 8
[2025-11-24 04:22:33] Threads: 8
[2025-11-24 04:22:33] Checking for CVMFS
[2025-11-24 04:22:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 04:22:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 04:22:34] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 04:22:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 04:22:34] 2.11.2.0 31887 3322 65284 153240 2 80 18025415 20275201 1 130560 0 1153244 99.981 113366 38377 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-24 04:22:34] CVMFS is ok
[2025-11-24 04:22:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 04:22:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 04:22:34] Further information can be found at the LHC@home message board.
[2025-11-24 04:22:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 04:22:34] Checking for apptainer binary...
[2025-11-24 04:22:34] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 04:22:34] Running /usr/bin/apptainer --version
[2025-11-24 04:22:34] apptainer version 1.3.2-1.el7
[2025-11-24 04:22:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 04:22:36] c-204-12.aglt2.org
[2025-11-24 04:22:36] apptainer works
[2025-11-24 04:22:36] Set ATHENA_PROC_NUMBER=8
[2025-11-24 04:22:36] Set ATHENA_CORE_NUMBER=8
[2025-11-24 04:22:36] Starting ATLAS job with PandaID=6895352287
[2025-11-24 04:22:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 17:15:17]  *** The last 200 lines of the pilot log: ***
[2025-11-24 17:15:17] 2025-11-24 22:14:27,495 | INFO     | time since job start (46293s) is within the limit (172800.0s)
[2025-11-24 17:15:17] 2025-11-24 22:14:27,684 | INFO     | monitor loop #3410: job 0:6895352287 is in state 'finished'
[2025-11-24 17:15:17] 2025-11-24 22:14:27,684 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 17:15:17] 2025-11-24 22:14:29,192 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-24 17:15:17] 2025-11-24 22:14:29,197 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1679.25
[2025-11-24 17:15:17] 2025-11-24 22:14:29,199 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895352287/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 17:15:17] 2025-11-24 22:14:29,200 | INFO     | extracted standard info from prmon json
[2025-11-24 17:15:17] 2025-11-24 22:14:29,200 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 17:15:17] 2025-11-24 22:14:29,201 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 17:15:17] 2025-11-24 22:14:29,215 | INFO     | fitting pss+swap vs Time
[2025-11-24 17:15:17] 2025-11-24 22:14:29,216 | INFO     | sum of square deviations: 135581392279.58885
[2025-11-24 17:15:17] 2025-11-24 22:14:29,228 | INFO     | sum of deviations: 750713516807.3281
[2025-11-24 17:15:17] 2025-11-24 22:14:29,228 | INFO     | mean x: 1763999326.5533597
[2025-11-24 17:15:17] 2025-11-24 22:14:29,228 | INFO     | mean y: 2875441.930171278
[2025-11-24 17:15:17] 2025-11-24 22:14:29,229 | INFO     | intersect: -9764380343.080616
[2025-11-24 17:15:17] 2025-11-24 22:14:29,229 | INFO     | chi2: 6.5359139288389425
[2025-11-24 17:15:17] 2025-11-24 22:14:29,230 | INFO     | sum of square deviations: 132919637910.54793
[2025-11-24 17:15:17] 2025-11-24 22:14:29,242 | INFO     | sum of deviations: 1031106209418.7742
[2025-11-24 17:15:17] 2025-11-24 22:14:29,242 | INFO     | mean x: 1763999174.0570292
[2025-11-24 17:15:17] 2025-11-24 22:14:29,242 | INFO     | mean y: 2891508.354111406
[2025-11-24 17:15:17] 2025-11-24 22:14:29,242 | INFO     | intersect: -13681094773.671822
[2025-11-24 17:15:17] 2025-11-24 22:14:29,243 | INFO     | chi2: 2.7808246499656577
[2025-11-24 17:15:17] 2025-11-24 22:14:29,243 | INFO     | current chi2=2.7808246499656577 (change=57.45316293570514 %)
[2025-11-24 17:15:17] 2025-11-24 22:14:29,244 | INFO     | sum of square deviations: 130292953966.48627
[2025-11-24 17:15:17] 2025-11-24 22:14:29,255 | INFO     | sum of deviations: 1115893629460.644
[2025-11-24 17:15:17] 2025-11-24 22:14:29,256 | INFO     | mean x: 1763999021.5607476
[2025-11-24 17:15:17] 2025-11-24 22:14:29,256 | INFO     | mean y: 2896423.777036048
[2025-11-24 17:15:17] 2025-11-24 22:14:29,256 | INFO     | intersect: -15104868122.268679
[2025-11-24 17:15:17] 2025-11-24 22:14:29,257 | INFO     | chi2: 2.2925955735448302
[2025-11-24 17:15:17] 2025-11-24 22:14:29,257 | INFO     | current chi2=2.2925955735448302 (change=17.55698894667296 %)
[2025-11-24 17:15:17] 2025-11-24 22:14:29,257 | INFO     | right removable region: 748
[2025-11-24 17:15:17] 2025-11-24 22:14:29,258 | INFO     | sum of square deviations: 132919381710.54787
[2025-11-24 17:15:17] 2025-11-24 22:14:29,269 | INFO     | sum of deviations: 547015016943.1037
[2025-11-24 17:15:17] 2025-11-24 22:14:29,270 | INFO     | mean x: 1763999479.0570292
[2025-11-24 17:15:17] 2025-11-24 22:14:29,270 | INFO     | mean y: 2887093.206896552
[2025-11-24 17:15:17] 2025-11-24 22:14:29,270 | INFO     | intersect: -7256657696.32047
[2025-11-24 17:15:17] 2025-11-24 22:14:29,271 | INFO     | chi2: 4.405633215332289
[2025-11-24 17:15:17] 2025-11-24 22:14:29,271 | INFO     | current chi2=4.405633215332289 (change=32.59346338860191 %)
[2025-11-24 17:15:17] 2025-11-24 22:14:29,272 | INFO     | sum of square deviations: 130292533554.72382
[2025-11-24 17:15:17] 2025-11-24 22:14:29,283 | INFO     | sum of deviations: 503892387746.968
[2025-11-24 17:15:17] 2025-11-24 22:14:29,283 | INFO     | mean x: 1763999631.5580773
[2025-11-24 17:15:17] 2025-11-24 22:14:29,283 | INFO     | mean y: 2889595.311081442
[2025-11-24 17:15:17] 2025-11-24 22:14:29,283 | INFO     | intersect: -6819189629.644977
[2025-11-24 17:15:17] 2025-11-24 22:14:29,284 | INFO     | chi2: 4.362972944424627
[2025-11-24 17:15:17] 2025-11-24 22:14:29,284 | INFO     | current chi2=4.362972944424627 (change=0.9683119048403268 %)
[2025-11-24 17:15:17] 2025-11-24 22:14:29,285 | INFO     | left removable region: 20
[2025-11-24 17:15:17] 2025-11-24 22:14:29,285 | INFO     | sum of square deviations: 119637940488.83546
[2025-11-24 17:15:17] 2025-11-24 22:14:29,300 | INFO     | sum of deviations: 816689210011.77
[2025-11-24 17:15:17] 2025-11-24 22:14:29,301 | INFO     | mean x: 1763999601.0659342
[2025-11-24 17:15:17] 2025-11-24 22:14:29,301 | INFO     | mean y: 2914306.8173076925
[2025-11-24 17:15:17] 2025-11-24 22:14:29,301 | INFO     | intersect: -12038746012.385986
[2025-11-24 17:15:17] 2025-11-24 22:14:29,302 | INFO     | chi2: 0.07424713464047372
[2025-11-24 17:15:17] 2025-11-24 22:14:29,302 | INFO     | current memory leak: 6.83 B/s (using 728 data points, chi2=0.07)
[2025-11-24 17:15:17] 2025-11-24 22:14:29,302 | INFO     | could have reported an average CPU frequency of 2165 MHz (29 samples)
[2025-11-24 17:15:17] 2025-11-24 22:14:29,303 | INFO     | ..............................
[2025-11-24 17:15:17] 2025-11-24 22:14:29,303 | INFO     | . Timing measurements:
[2025-11-24 17:15:17] 2025-11-24 22:14:29,303 | INFO     | . get job = 0 s
[2025-11-24 17:15:17] 2025-11-24 22:14:29,303 | INFO     | . initial setup = 2 s
[2025-11-24 17:15:17] 2025-11-24 22:14:29,303 | INFO     | . payload setup = 9 s
[2025-11-24 17:15:17] 2025-11-24 22:14:29,303 | INFO     | . stage-in = 0 s
[2025-11-24 17:15:17] 2025-11-24 22:14:29,303 | INFO     | . payload execution = 46251 s
[2025-11-24 17:15:17] 2025-11-24 22:14:29,303 | INFO     | . stage-out = 4 s
[2025-11-24 17:15:17] 2025-11-24 22:14:29,303 | INFO     | . log creation = 0 s
[2025-11-24 17:15:17] 2025-11-24 22:14:29,304 | INFO     | ..............................
[2025-11-24 17:15:17] 2025-11-24 22:14:29,401 | INFO     | 
[2025-11-24 17:15:17] 2025-11-24 22:14:29,401 | INFO     | job summary report
[2025-11-24 17:15:17] 2025-11-24 22:14:29,401 | INFO     | --------------------------------------------------
[2025-11-24 17:15:17] 2025-11-24 22:14:29,401 | INFO     | PanDA job id: 6895352287
[2025-11-24 17:15:17] 2025-11-24 22:14:29,401 | INFO     | task id: 47556137
[2025-11-24 17:15:17] 2025-11-24 22:14:29,402 | INFO     | errors: (none)
[2025-11-24 17:15:17] 2025-11-24 22:14:29,402 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 17:15:17] 2025-11-24 22:14:29,402 | INFO     | pilot state: finished 
[2025-11-24 17:15:17] 2025-11-24 22:14:29,402 | INFO     | transexitcode: 0
[2025-11-24 17:15:17] 2025-11-24 22:14:29,402 | INFO     | exeerrorcode: 0
[2025-11-24 17:15:17] 2025-11-24 22:14:29,403 | INFO     | exeerrordiag: 
[2025-11-24 17:15:17] 2025-11-24 22:14:29,403 | INFO     | exitcode: 0
[2025-11-24 17:15:17] 2025-11-24 22:14:29,403 | INFO     | exitmsg: OK
[2025-11-24 17:15:17] 2025-11-24 22:14:29,403 | INFO     | cpuconsumptiontime: 358207 s
[2025-11-24 17:15:17] 2025-11-24 22:14:29,403 | INFO     | nevents: 1000
[2025-11-24 17:15:17] 2025-11-24 22:14:29,403 | INFO     | neventsw: 0
[2025-11-24 17:15:17] 2025-11-24 22:14:29,404 | INFO     | pid: 11230
[2025-11-24 17:15:17] 2025-11-24 22:14:29,404 | INFO     | pgrp: 11230
[2025-11-24 17:15:17] 2025-11-24 22:14:29,404 | INFO     | corecount: 8
[2025-11-24 17:15:17] 2025-11-24 22:14:29,404 | INFO     | event service: False
[2025-11-24 17:15:17] 2025-11-24 22:14:29,404 | INFO     | sizes: {0: 2298756, 1: 2298756, 6: 2299046, 11: 2299074, 46264: 2345500, 46269: 2355285, 46271: 2355469, 46277: 2355715}
[2025-11-24 17:15:17] 2025-11-24 22:14:29,404 | INFO     | --------------------------------------------------
[2025-11-24 17:15:17] 2025-11-24 22:14:29,405 | INFO     | 
[2025-11-24 17:15:17] 2025-11-24 22:14:29,405 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-24 17:15:17] 2025-11-24 22:14:29,434 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 17:15:17] 2025-11-24 22:14:29,435 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 17:15:17] 2025-11-24 22:14:29,435 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 17:15:17] 2025-11-24 22:14:29,435 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 17:15:17] 2025-11-24 22:14:29,436 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 17:15:17] 2025-11-24 22:14:29,436 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 17:15:17] 2025-11-24 22:14:29,436 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 17:15:17] 2025-11-24 22:14:29,436 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 17:15:17] 2025-11-24 22:14:29,436 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 17:15:17] 2025-11-24 22:14:29,437 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 17:15:17] 2025-11-24 22:14:29,437 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 17:15:17] 2025-11-24 22:14:29,437 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 17:15:17] 2025-11-24 22:14:29,437 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 17:15:17] 2025-11-24 22:14:29,437 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 17:15:17] 2025-11-24 22:14:29,437 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 17:15:17] 2025-11-24 22:14:29,438 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 17:15:17] 2025-11-24 22:14:29,438 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 17:15:17] 2025-11-24 22:14:29,438 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 17:15:17] 2025-11-24 22:14:29,438 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 17:15:17] 2025-11-24 22:14:29,438 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 17:15:17] 2025-11-24 22:14:29,439 | INFO     | job 6895352287 has completed (purged errors)
[2025-11-24 17:15:17] 2025-11-24 22:14:29,439 | INFO     | overall cleanup function is called
[2025-11-24 17:15:17] 2025-11-24 22:14:30,454 | INFO     | --- collectZombieJob: --- 10, [11230]
[2025-11-24 17:15:17] 2025-11-24 22:14:30,455 | INFO     | zombie collector waiting for pid 11230
[2025-11-24 17:15:17] 2025-11-24 22:14:30,455 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 17:15:17] 2025-11-24 22:14:30,455 | INFO     | collected zombie processes
[2025-11-24 17:15:17] 2025-11-24 22:14:30,455 | INFO     | will attempt to kill all subprocesses of pid=11230
[2025-11-24 17:15:17] 2025-11-24 22:14:30,546 | INFO     | process IDs to be killed: [11230] (in reverse order)
[2025-11-24 17:15:17] 2025-11-24 22:14:30,601 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 17:15:17] 2025-11-24 22:14:30,601 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 17:15:17] 2025-11-24 22:14:30,605 | INFO     | did not find any defunct processes belonging to 11230
[2025-11-24 17:15:17] 2025-11-24 22:14:30,608 | INFO     | did not find any defunct processes belonging to 11230
[2025-11-24 17:15:17] 2025-11-24 22:14:30,611 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 17:15:17] 2025-11-24 22:14:30,611 | INFO     | ready for new job
[2025-11-24 17:15:17] 2025-11-24 22:14:30,612 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 17:15:17] 2025-11-24 22:14:30,615 | INFO     | ***************************************
[2025-11-24 17:15:17] 2025-11-24 22:14:30,616 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 17:15:17] 2025-11-24 22:14:30,616 | INFO     | ***************************************
[2025-11-24 17:15:17] 2025-11-24 22:14:30,616 | INFO     | 
[2025-11-24 17:15:17] 2025-11-24 22:14:30,616 | INFO     | architecture information:
[2025-11-24 17:15:17] 2025-11-24 22:14:30,617 | INFO     | executing command: cat /etc/os-release
[2025-11-24 17:15:17] 2025-11-24 22:14:30,636 | INFO     | cat /etc/os-release:
[2025-11-24 17:15:17] NAME="CentOS Linux"
[2025-11-24 17:15:17] VERSION="7 (Core)"
[2025-11-24 17:15:17] ID="centos"
[2025-11-24 17:15:17] ID_LIKE="rhel fedora"
[2025-11-24 17:15:17] VERSION_ID="7"
[2025-11-24 17:15:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 17:15:17] ANSI_COLOR="0;31"
[2025-11-24 17:15:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 17:15:17] HOME_URL="https://www.centos.org/"
[2025-11-24 17:15:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 17:15:17] 
[2025-11-24 17:15:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 17:15:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 17:15:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 17:15:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 17:15:17] 
[2025-11-24 17:15:17] 2025-11-24 22:14:30,637 | INFO     | ***************************************
[2025-11-24 17:15:17] 2025-11-24 22:14:31,140 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-24 17:15:17] 2025-11-24 22:14:31,161 | INFO     | sufficient remaining disk space (17447256064 B)
[2025-11-24 17:15:17] 2025-11-24 22:14:31,161 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 17:15:17] 2025-11-24 22:14:31,162 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 17:15:17] 2025-11-24 22:14:31,162 | INFO     | update_server=False
[2025-11-24 17:15:17] 2025-11-24 22:14:31,162 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 17:15:17] 2025-11-24 22:14:31,163 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 17:15:17] 2025-11-24 22:14:31,163 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 17:15:17] 2025-11-24 22:14:31,179 | INFO     | all job control threads have been joined
[2025-11-24 17:15:17] 2025-11-24 22:14:31,193 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 17:15:17] 2025-11-24 22:14:31,193 | INFO     | aborting loop
[2025-11-24 17:15:17] 2025-11-24 22:14:31,273 | INFO     | all payload control threads have been joined
[2025-11-24 17:15:17] 2025-11-24 22:14:31,564 | INFO     | all data control threads have been joined
[2025-11-24 17:15:17] 2025-11-24 22:14:32,168 | INFO     | [job] retrieve thread has finished
[2025-11-24 17:15:17] 2025-11-24 22:14:32,169 | INFO     | [job] queue monitor thread has finished
[2025-11-24 17:15:17] 2025-11-24 22:14:32,185 | INFO     | [job] control thread has finished
[2025-11-24 17:15:17] 2025-11-24 22:14:32,196 | INFO     | [job] job monitor thread has finished
[2025-11-24 17:15:17] 2025-11-24 22:14:32,217 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 17:15:17] 2025-11-24 22:14:32,276 | INFO     | [payload] control thread has finished
[2025-11-24 17:15:17] 2025-11-24 22:14:32,478 | INFO     | [job] validate thread has finished
[2025-11-24 17:15:17] 2025-11-24 22:14:32,481 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 17:15:17] 2025-11-24 22:14:32,555 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 17:15:17] 2025-11-24 22:14:32,569 | INFO     | [data] control thread has finished
[2025-11-24 17:15:17] 2025-11-24 22:14:32,774 | INFO     | [payload] failed_post thread has finished
[2025-11-24 17:15:17] 2025-11-24 22:14:32,859 | INFO     | [data] copytool_in thread has finished
[2025-11-24 17:15:17] 2025-11-24 22:14:33,164 | INFO     | [data] copytool_out thread has finished
[2025-11-24 17:15:17] 2025-11-24 22:14:33,335 | INFO     | [payload] validate_post thread has finished
[2025-11-24 17:15:17] 2025-11-24 22:14:33,816 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 17:15:17] 2025-11-24 22:14:37,822 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 17:15:17] 2025-11-24 22:14:41,967 | INFO     | job.realtimelogging is not enabled
[2025-11-24 17:15:17] 2025-11-24 22:14:42,968 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 17:15:17] 2025-11-24 22:15:00,713 | INFO     | PID=4701 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-24 17:15:17] 2025-11-24 22:15:00,713 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 17:15:17] 2025-11-24 22:15:00,713 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 17:15:17] 2025-11-24 22:15:00,713 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 17:15:17] 2025-11-24 22:15:11,093 | INFO     | [monitor] cgroup control has ended
[2025-11-24 17:15:17] 2025-11-24 22:15:12,098 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140388422219584)>', '<ExcThread(monitor, started 140387171690240)>']
[2025-11-24 17:15:17] 2025-11-24 22:15:12,768 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 17:15:17] 2025-11-24 22:15:12,768 | INFO     | [monitor] control thread has ended
[2025-11-24 17:15:17] 2025-11-24 22:15:17,112 | INFO     | all workflow threads have been joined
[2025-11-24 17:15:17] 2025-11-24 22:15:17,113 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 17:15:17] 2025-11-24 22:15:17,113 | INFO     | traces error code: 0
[2025-11-24 17:15:17] 2025-11-24 22:15:17,113 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 17:15:17] 2025-11-24 22:15:17,242 [wrapper] ==== pilot stdout END ====
[2025-11-24 17:15:17] 2025-11-24 22:15:17,247 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 17:15:17] 2025-11-24 22:15:17,252 [wrapper] pilotpid: 4701
[2025-11-24 17:15:17] 2025-11-24 22:15:17,257 [wrapper] Pilot exit status: 0
[2025-11-24 17:15:17] 2025-11-24 22:15:17,274 [wrapper] pandaids: 6895352287
[2025-11-24 17:15:17] 2025-11-24 22:15:17,332 [wrapper] cleanup supervisor_pilot 30090 4702
[2025-11-24 17:15:17] 2025-11-24 22:15:17,337 [wrapper] Test setup, not cleaning
[2025-11-24 17:15:17] 2025-11-24 22:15:17,342 [wrapper] apfmon messages muted
[2025-11-24 17:15:17] 2025-11-24 22:15:17,347 [wrapper] ==== wrapper stdout END ====
[2025-11-24 17:15:17] 2025-11-24 22:15:17,352 [wrapper] ==== wrapper stderr END ====
[2025-11-24 17:15:17]  *** Error codes and diagnostics ***
[2025-11-24 17:15:17]     "exeErrorCode": 0,
[2025-11-24 17:15:17]     "exeErrorDiag": "",
[2025-11-24 17:15:17]     "pilotErrorCode": 0,
[2025-11-24 17:15:17]     "pilotErrorDiag": "",
[2025-11-24 17:15:17]  *** Listing of results directory ***
[2025-11-24 17:15:17] total 1337980
[2025-11-24 17:15:17] -rw-r--r-- 1 boincer umatlas    576529 Nov 22 21:20 pilot3.tar.gz
[2025-11-24 17:15:17] -rwx------ 1 boincer umatlas     36292 Nov 22 21:44 runpilot2-wrapper.sh
[2025-11-24 17:15:17] -rw-r--r-- 1 boincer umatlas      5112 Nov 22 21:44 queuedata.json
[2025-11-24 17:15:17] -rw-r--r-- 1 boincer umatlas       100 Nov 24 04:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 17:15:17] -rwxr-xr-x 1 boincer umatlas      7986 Nov 24 04:22 run_atlas
[2025-11-24 17:15:17] -rw-r--r-- 1 boincer umatlas       105 Nov 24 04:22 job.xml
[2025-11-24 17:15:17] -rw-r--r-- 2 boincer umatlas 412567276 Nov 24 04:22 EVNT.47483658._000586.pool.root.1
[2025-11-24 17:15:17] -rw-r--r-- 2 boincer umatlas     15847 Nov 24 04:22 start_atlas.sh
[2025-11-24 17:15:17] drwxrwx--x 2 boincer umatlas      4096 Nov 24 04:22 shared
[2025-11-24 17:15:17] -rw-r--r-- 2 boincer umatlas    590101 Nov 24 04:22 input.tar.gz
[2025-11-24 17:15:17] -rw-r--r-- 1 boincer umatlas         0 Nov 24 04:22 boinc_lockfile
[2025-11-24 17:15:17] -rw-r--r-- 1 boincer umatlas      2785 Nov 24 04:22 pandaJob.out
[2025-11-24 17:15:17] -rw------- 1 boincer umatlas        57 Nov 24 04:22 setup.sh.local
[2025-11-24 17:15:17] -rw------- 1 boincer umatlas    989824 Nov 24 04:22 agis_schedconf.cvmfs.json
[2025-11-24 17:15:17] drwx------ 5 boincer umatlas      4096 Nov 24 04:22 pilot3
[2025-11-24 17:15:17] -rw-r--r-- 1 boincer umatlas       532 Nov 24 17:02 boinc_task_state.xml
[2025-11-24 17:15:17] -rw-r--r-- 1 boincer umatlas      5912 Nov 24 17:09 init_data.xml
[2025-11-24 17:15:17] -rw------- 1 boincer umatlas 936847485 Nov 24 17:13 HITS.47556137._005816.pool.root.1
[2025-11-24 17:15:17] -rw------- 1 boincer umatlas        95 Nov 24 17:14 pilot_heartbeat.json
[2025-11-24 17:15:17] -rw------- 1 boincer umatlas      1062 Nov 24 17:14 memory_monitor_summary.json
[2025-11-24 17:15:17] -rw------- 1 boincer umatlas   1516227 Nov 24 17:14 agis_ddmendpoints.agis.ALL.json
[2025-11-24 17:15:17] -rw------- 1 boincer umatlas   2004545 Nov 24 17:14 log.47556137._005816.job.log.tgz.1
[2025-11-24 17:15:17] -rw------- 1 boincer umatlas      8675 Nov 24 17:14 heartbeat.json
[2025-11-24 17:15:17] -rw-r--r-- 1 boincer umatlas      8192 Nov 24 17:14 boinc_mmap_file
[2025-11-24 17:15:17] -rw-r--r-- 1 boincer umatlas        29 Nov 24 17:14 wrapper_checkpoint.txt
[2025-11-24 17:15:17] -rw------- 1 boincer umatlas      4817 Nov 24 17:15 pilotlog.txt
[2025-11-24 17:15:17] -rw------- 1 boincer umatlas   6376872 Nov 24 17:15 log.47556137._005816.job.log.1
[2025-11-24 17:15:17] -rw------- 1 boincer umatlas       353 Nov 24 17:15 output.list
[2025-11-24 17:15:17] -rw-r--r-- 1 boincer umatlas       620 Nov 24 17:15 runtime_log
[2025-11-24 17:15:17] -rw------- 1 boincer umatlas   8396800 Nov 24 17:15 result.tar.gz
[2025-11-24 17:15:17] -rw-r--r-- 1 boincer umatlas      9343 Nov 24 17:15 runtime_log.err
[2025-11-24 17:15:17] -rw------- 1 boincer umatlas       668 Nov 24 17:15 LxFODmjGFh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmoYKKDmjpAPpm.diag
[2025-11-24 17:15:17] -rw-r--r-- 1 boincer umatlas     21277 Nov 24 17:15 stderr.txt
[2025-11-24 17:15:17] HITS file was successfully produced:
[2025-11-24 17:15:17] -rw------- 1 boincer umatlas 936847485 Nov 24 17:13 shared/HITS.pool.root.1
[2025-11-24 17:15:17]  *** Contents of shared directory: ***
[2025-11-24 17:15:17] total 1326596
[2025-11-24 17:15:17] -rw-r--r-- 2 boincer umatlas 412567276 Nov 24 04:22 ATLAS.root_0
[2025-11-24 17:15:17] -rw-r--r-- 2 boincer umatlas     15847 Nov 24 04:22 start_atlas.sh
[2025-11-24 17:15:17] -rw-r--r-- 2 boincer umatlas    590101 Nov 24 04:22 input.tar.gz
[2025-11-24 17:15:17] -rw------- 1 boincer umatlas 936847485 Nov 24 17:13 HITS.pool.root.1
[2025-11-24 17:15:17] -rw------- 1 boincer umatlas   8396800 Nov 24 17:15 result.tar.gz
17:15:18 (874): run_atlas exited; CPU time 354118.145578
17:15:18 (874): called boinc_finish(0)

</stderr_txt>
]]>

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