Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
04:50:26 (18986): wrapper (7.7.26015): starting
04:50:26 (18986): wrapper: running run_atlas (--nthreads 12)
[2025-11-24 04:50:26] Arguments: --nthreads 12
[2025-11-24 04:50:26] Threads: 12
[2025-11-24 04:50:26] Checking for CVMFS
[2025-11-24 04:50:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 04:50:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 04:50:26] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 04:50:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 04:50:26] 2.11.2.0 6893 114557 89284 153240 2 82 17875693 20275200 1 130560 0 49031056 99.932 5906554 31005 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-24 04:50:26] CVMFS is ok
[2025-11-24 04:50:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 04:50:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 04:50:26] Further information can be found at the LHC@home message board.
[2025-11-24 04:50:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 04:50:26] Checking for apptainer binary...
[2025-11-24 04:50:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 04:50:26] Running /usr/bin/apptainer --version
[2025-11-24 04:50:26] apptainer version 1.3.2-1.el7
[2025-11-24 04:50:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 04:50:28] c-205-3.aglt2.org
[2025-11-24 04:50:28] apptainer works
[2025-11-24 04:50:28] Set ATHENA_PROC_NUMBER=12
[2025-11-24 04:50:28] Set ATHENA_CORE_NUMBER=12
[2025-11-24 04:50:28] Starting ATLAS job with PandaID=6895348855
[2025-11-24 04:50:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 12:13:32]  *** The last 200 lines of the pilot log: ***
[2025-11-24 12:13:32] 2025-11-24 17:12:37,698 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1695.8333333333333
[2025-11-24 12:13:32] 2025-11-24 17:12:37,699 | INFO     | monitor loop #1986: job 0:6895348855 is in state 'finished'
[2025-11-24 12:13:32] 2025-11-24 17:12:37,699 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 12:13:32] 2025-11-24 17:12:37,701 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895348855/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 12:13:32] 2025-11-24 17:12:37,702 | INFO     | extracted standard info from prmon json
[2025-11-24 12:13:32] 2025-11-24 17:12:37,702 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 12:13:32] 2025-11-24 17:12:37,703 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 12:13:32] 2025-11-24 17:12:37,709 | INFO     | fitting pss+swap vs Time
[2025-11-24 12:13:32] 2025-11-24 17:12:37,710 | INFO     | sum of square deviations: 25348052473.6245
[2025-11-24 12:13:32] 2025-11-24 17:12:37,714 | INFO     | sum of deviations: 366679548013.68463
[2025-11-24 12:13:32] 2025-11-24 17:12:37,714 | INFO     | mean x: 1763991080.748848
[2025-11-24 12:13:32] 2025-11-24 17:12:37,714 | INFO     | mean y: 3425857.8686635946
[2025-11-24 12:13:32] 2025-11-24 17:12:37,714 | INFO     | intersect: -25514094782.511734
[2025-11-24 12:13:32] 2025-11-24 17:12:37,715 | INFO     | chi2: 5.63959418407305
[2025-11-24 12:13:32] 2025-11-24 17:12:37,715 | INFO     | sum of square deviations: 24482050570.811153
[2025-11-24 12:13:32] 2025-11-24 17:12:37,719 | INFO     | sum of deviations: 515711558518.0418
[2025-11-24 12:13:32] 2025-11-24 17:12:37,719 | INFO     | mean x: 1763990928.2517483
[2025-11-24 12:13:32] 2025-11-24 17:12:37,720 | INFO     | mean y: 3452068.2773892772
[2025-11-24 12:13:32] 2025-11-24 17:12:37,720 | INFO     | intersect: -37154812440.211266
[2025-11-24 12:13:32] 2025-11-24 17:12:37,720 | INFO     | chi2: 3.0956536249675706
[2025-11-24 12:13:32] 2025-11-24 17:12:37,720 | INFO     | current chi2=3.0956536249675706 (change=45.108574767487696 %)
[2025-11-24 12:13:32] 2025-11-24 17:12:37,721 | INFO     | sum of square deviations: 23636002530.49054
[2025-11-24 12:13:32] 2025-11-24 17:12:37,725 | INFO     | sum of deviations: 587258004859.5092
[2025-11-24 12:13:32] 2025-11-24 17:12:37,725 | INFO     | mean x: 1763990775.7547169
[2025-11-24 12:13:32] 2025-11-24 17:12:37,725 | INFO     | mean y: 3464943.245283019
[2025-11-24 12:13:32] 2025-11-24 17:12:37,725 | INFO     | intersect: -43824492099.15031
[2025-11-24 12:13:32] 2025-11-24 17:12:37,725 | INFO     | chi2: 2.381753167503099
[2025-11-24 12:13:32] 2025-11-24 17:12:37,726 | INFO     | current chi2=2.381753167503099 (change=23.061380372358357 %)
[2025-11-24 12:13:32] 2025-11-24 17:12:37,726 | INFO     | right removable region: 423
[2025-11-24 12:13:32] 2025-11-24 17:12:37,726 | INFO     | sum of square deviations: 24482011042.312126
[2025-11-24 12:13:32] 2025-11-24 17:12:37,730 | INFO     | sum of deviations: 232274438054.37982
[2025-11-24 12:13:32] 2025-11-24 17:12:37,730 | INFO     | mean x: 1763991233.2494173
[2025-11-24 12:13:32] 2025-11-24 17:12:37,730 | INFO     | mean y: 3449442.51981352
[2025-11-24 12:13:32] 2025-11-24 17:12:37,730 | INFO     | intersect: -16732515251.219055
[2025-11-24 12:13:32] 2025-11-24 17:12:37,731 | INFO     | chi2: 3.4386384273079655
[2025-11-24 12:13:32] 2025-11-24 17:12:37,731 | INFO     | current chi2=3.4386384273079655 (change=39.02684634615857 %)
[2025-11-24 12:13:32] 2025-11-24 17:12:37,732 | INFO     | sum of square deviations: 23635976298.490444
[2025-11-24 12:13:32] 2025-11-24 17:12:37,735 | INFO     | sum of deviations: 199852611276.57544
[2025-11-24 12:13:32] 2025-11-24 17:12:37,735 | INFO     | mean x: 1763991385.7452831
[2025-11-24 12:13:32] 2025-11-24 17:12:37,736 | INFO     | mean y: 3455279.912735849
[2025-11-24 12:13:32] 2025-11-24 17:12:37,736 | INFO     | intersect: -14911870419.288242
[2025-11-24 12:13:32] 2025-11-24 17:12:37,736 | INFO     | chi2: 3.386340609456049
[2025-11-24 12:13:32] 2025-11-24 17:12:37,736 | INFO     | current chi2=3.386340609456049 (change=1.520887379044952 %)
[2025-11-24 12:13:32] 2025-11-24 17:12:37,736 | INFO     | left removable region: 20
[2025-11-24 12:13:32] 2025-11-24 17:12:37,737 | INFO     | sum of square deviations: 20295292261.131573
[2025-11-24 12:13:32] 2025-11-24 17:12:37,740 | INFO     | sum of deviations: 386572360907.16364
[2025-11-24 12:13:32] 2025-11-24 17:12:37,741 | INFO     | mean x: 1763991355.2382133
[2025-11-24 12:13:32] 2025-11-24 17:12:37,741 | INFO     | mean y: 3504832.5607940448
[2025-11-24 12:13:32] 2025-11-24 17:12:37,741 | INFO     | intersect: -33595927688.06471
[2025-11-24 12:13:32] 2025-11-24 17:12:37,741 | INFO     | chi2: 0.052606596446306976
[2025-11-24 12:13:32] 2025-11-24 17:12:37,741 | INFO     | current memory leak: 19.05 B/s (using 403 data points, chi2=0.05)
[2025-11-24 12:13:32] 2025-11-24 17:12:37,742 | INFO     | could have reported an average CPU frequency of 2414 MHz (18 samples)
[2025-11-24 12:13:32] 2025-11-24 17:12:37,742 | INFO     | ..............................
[2025-11-24 12:13:32] 2025-11-24 17:12:37,742 | INFO     | . Timing measurements:
[2025-11-24 12:13:32] 2025-11-24 17:12:37,742 | INFO     | . get job = 0 s
[2025-11-24 12:13:32] 2025-11-24 17:12:37,742 | INFO     | . initial setup = 2 s
[2025-11-24 12:13:32] 2025-11-24 17:12:37,742 | INFO     | . payload setup = 8 s
[2025-11-24 12:13:32] 2025-11-24 17:12:37,742 | INFO     | . stage-in = 0 s
[2025-11-24 12:13:32] 2025-11-24 17:12:37,743 | INFO     | . payload execution = 26472 s
[2025-11-24 12:13:32] 2025-11-24 17:12:37,743 | INFO     | . stage-out = 3 s
[2025-11-24 12:13:32] 2025-11-24 17:12:37,743 | INFO     | . log creation = 0 s
[2025-11-24 12:13:32] 2025-11-24 17:12:37,743 | INFO     | ..............................
[2025-11-24 12:13:32] 2025-11-24 17:12:38,294 | INFO     | 
[2025-11-24 12:13:32] 2025-11-24 17:12:38,294 | INFO     | job summary report
[2025-11-24 12:13:32] 2025-11-24 17:12:38,295 | INFO     | --------------------------------------------------
[2025-11-24 12:13:32] 2025-11-24 17:12:38,295 | INFO     | PanDA job id: 6895348855
[2025-11-24 12:13:32] 2025-11-24 17:12:38,295 | INFO     | task id: 47556137
[2025-11-24 12:13:32] 2025-11-24 17:12:38,295 | INFO     | errors: (none)
[2025-11-24 12:13:32] 2025-11-24 17:12:38,295 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 12:13:32] 2025-11-24 17:12:38,295 | INFO     | pilot state: finished 
[2025-11-24 12:13:32] 2025-11-24 17:12:38,296 | INFO     | transexitcode: 0
[2025-11-24 12:13:32] 2025-11-24 17:12:38,296 | INFO     | exeerrorcode: 0
[2025-11-24 12:13:32] 2025-11-24 17:12:38,296 | INFO     | exeerrordiag: 
[2025-11-24 12:13:32] 2025-11-24 17:12:38,296 | INFO     | exitcode: 0
[2025-11-24 12:13:32] 2025-11-24 17:12:38,296 | INFO     | exitmsg: OK
[2025-11-24 12:13:32] 2025-11-24 17:12:38,296 | INFO     | cpuconsumptiontime: 302847 s
[2025-11-24 12:13:32] 2025-11-24 17:12:38,297 | INFO     | nevents: 1000
[2025-11-24 12:13:32] 2025-11-24 17:12:38,297 | INFO     | neventsw: 0
[2025-11-24 12:13:32] 2025-11-24 17:12:38,297 | INFO     | pid: 29118
[2025-11-24 12:13:32] 2025-11-24 17:12:38,297 | INFO     | pgrp: 29118
[2025-11-24 12:13:32] 2025-11-24 17:12:38,297 | INFO     | corecount: 12
[2025-11-24 12:13:32] 2025-11-24 17:12:38,297 | INFO     | event service: False
[2025-11-24 12:13:32] 2025-11-24 17:12:38,298 | INFO     | sizes: {0: 2298528, 1: 2298727, 6: 2298989, 11: 2299017, 26484: 2336502, 26488: 2346287, 26490: 2346471, 26498: 2346717}
[2025-11-24 12:13:32] 2025-11-24 17:12:38,298 | INFO     | --------------------------------------------------
[2025-11-24 12:13:32] 2025-11-24 17:12:38,298 | INFO     | 
[2025-11-24 12:13:32] 2025-11-24 17:12:38,298 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-24 12:13:32] 2025-11-24 17:12:38,323 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 12:13:32] 2025-11-24 17:12:38,323 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 12:13:32] 2025-11-24 17:12:38,323 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 12:13:32] 2025-11-24 17:12:38,323 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 12:13:32] 2025-11-24 17:12:38,324 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 12:13:32] 2025-11-24 17:12:38,324 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 12:13:32] 2025-11-24 17:12:38,324 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 12:13:32] 2025-11-24 17:12:38,324 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 12:13:32] 2025-11-24 17:12:38,324 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 12:13:32] 2025-11-24 17:12:38,324 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 12:13:32] 2025-11-24 17:12:38,325 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 12:13:32] 2025-11-24 17:12:38,325 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 12:13:32] 2025-11-24 17:12:38,325 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 12:13:32] 2025-11-24 17:12:38,325 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 12:13:32] 2025-11-24 17:12:38,325 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 12:13:32] 2025-11-24 17:12:38,325 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 12:13:32] 2025-11-24 17:12:38,326 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 12:13:32] 2025-11-24 17:12:38,326 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 12:13:32] 2025-11-24 17:12:38,326 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 12:13:32] 2025-11-24 17:12:38,326 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 12:13:32] 2025-11-24 17:12:38,326 | INFO     | job 6895348855 has completed (purged errors)
[2025-11-24 12:13:32] 2025-11-24 17:12:38,327 | INFO     | overall cleanup function is called
[2025-11-24 12:13:32] 2025-11-24 17:12:39,339 | INFO     | --- collectZombieJob: --- 10, [29118]
[2025-11-24 12:13:32] 2025-11-24 17:12:39,339 | INFO     | zombie collector waiting for pid 29118
[2025-11-24 12:13:32] 2025-11-24 17:12:39,339 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 12:13:32] 2025-11-24 17:12:39,339 | INFO     | collected zombie processes
[2025-11-24 12:13:32] 2025-11-24 17:12:39,339 | INFO     | will attempt to kill all subprocesses of pid=29118
[2025-11-24 12:13:32] 2025-11-24 17:12:39,430 | INFO     | process IDs to be killed: [29118] (in reverse order)
[2025-11-24 12:13:32] 2025-11-24 17:12:39,483 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 12:13:32] 2025-11-24 17:12:39,483 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 12:13:32] 2025-11-24 17:12:39,487 | INFO     | did not find any defunct processes belonging to 29118
[2025-11-24 12:13:32] 2025-11-24 17:12:39,490 | INFO     | did not find any defunct processes belonging to 29118
[2025-11-24 12:13:32] 2025-11-24 17:12:39,493 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 12:13:32] 2025-11-24 17:12:39,493 | INFO     | ready for new job
[2025-11-24 12:13:32] 2025-11-24 17:12:39,493 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 12:13:32] 2025-11-24 17:12:39,495 | INFO     | ***************************************
[2025-11-24 12:13:32] 2025-11-24 17:12:39,495 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 12:13:32] 2025-11-24 17:12:39,495 | INFO     | ***************************************
[2025-11-24 12:13:32] 2025-11-24 17:12:39,495 | INFO     | 
[2025-11-24 12:13:32] 2025-11-24 17:12:39,496 | INFO     | architecture information:
[2025-11-24 12:13:32] 2025-11-24 17:12:39,497 | INFO     | executing command: cat /etc/os-release
[2025-11-24 12:13:32] 2025-11-24 17:12:39,512 | INFO     | cat /etc/os-release:
[2025-11-24 12:13:32] NAME="CentOS Linux"
[2025-11-24 12:13:32] VERSION="7 (Core)"
[2025-11-24 12:13:32] ID="centos"
[2025-11-24 12:13:32] ID_LIKE="rhel fedora"
[2025-11-24 12:13:32] VERSION_ID="7"
[2025-11-24 12:13:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 12:13:32] ANSI_COLOR="0;31"
[2025-11-24 12:13:32] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 12:13:32] HOME_URL="https://www.centos.org/"
[2025-11-24 12:13:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 12:13:32] 
[2025-11-24 12:13:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 12:13:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 12:13:32] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 12:13:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 12:13:32] 
[2025-11-24 12:13:32] 2025-11-24 17:12:39,512 | INFO     | ***************************************
[2025-11-24 12:13:32] 2025-11-24 17:12:40,015 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-24 12:13:32] 2025-11-24 17:12:40,032 | INFO     | sufficient remaining disk space (28357689344 B)
[2025-11-24 12:13:32] 2025-11-24 17:12:40,033 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 12:13:32] 2025-11-24 17:12:40,033 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 12:13:32] 2025-11-24 17:12:40,033 | INFO     | update_server=False
[2025-11-24 12:13:32] 2025-11-24 17:12:40,033 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 12:13:32] 2025-11-24 17:12:40,137 | INFO     | all job control threads have been joined
[2025-11-24 12:13:32] 2025-11-24 17:12:40,202 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-24 12:13:32] 2025-11-24 17:12:40,202 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-24 12:13:32] 2025-11-24 17:12:40,203 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 12:13:32] 2025-11-24 17:12:40,203 | INFO     | will abort loop
[2025-11-24 12:13:32] 2025-11-24 17:12:40,411 | INFO     | all payload control threads have been joined
[2025-11-24 12:13:32] 2025-11-24 17:12:40,411 | INFO     | all data control threads have been joined
[2025-11-24 12:13:32] 2025-11-24 17:12:40,483 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 12:13:32] 2025-11-24 17:12:40,632 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 12:13:32] 2025-11-24 17:12:41,034 | INFO     | [job] retrieve thread has finished
[2025-11-24 12:13:32] 2025-11-24 17:12:41,044 | INFO     | [payload] validate_post thread has finished
[2025-11-24 12:13:32] 2025-11-24 17:12:41,138 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 12:13:32] 2025-11-24 17:12:41,141 | INFO     | [job] control thread has finished
[2025-11-24 12:13:32] 2025-11-24 17:12:41,141 | INFO     | [data] copytool_in thread has finished
[2025-11-24 12:13:32] 2025-11-24 17:12:41,208 | INFO     | [job] job monitor thread has finished
[2025-11-24 12:13:32] 2025-11-24 17:12:41,416 | INFO     | [payload] control thread has finished
[2025-11-24 12:13:32] 2025-11-24 17:12:41,418 | INFO     | [data] control thread has finished
[2025-11-24 12:13:32] 2025-11-24 17:12:41,429 | INFO     | [payload] failed_post thread has finished
[2025-11-24 12:13:32] 2025-11-24 17:12:41,477 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 12:13:32] 2025-11-24 17:12:41,624 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 12:13:32] 2025-11-24 17:12:42,188 | INFO     | [job] validate thread has finished
[2025-11-24 12:13:32] 2025-11-24 17:12:42,637 | INFO     | [data] copytool_out thread has finished
[2025-11-24 12:13:32] 2025-11-24 17:12:42,835 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 12:13:32] 2025-11-24 17:12:43,837 | INFO     | [job] queue monitor thread has finished
[2025-11-24 12:13:32] 2025-11-24 17:12:44,489 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 12:13:32] 2025-11-24 17:12:50,492 | INFO     | job.realtimelogging is not enabled
[2025-11-24 12:13:32] 2025-11-24 17:12:51,497 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 12:13:32] 2025-11-24 17:13:10,854 | INFO     | PID=22705 has CPU usage=4.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-24 12:13:32] 2025-11-24 17:13:10,855 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 12:13:32] 2025-11-24 17:13:10,855 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 12:13:32] 2025-11-24 17:13:10,855 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 12:13:32] 2025-11-24 17:13:26,644 | INFO     | [monitor] cgroup control has ended
[2025-11-24 12:13:32] 2025-11-24 17:13:27,610 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139663324022592)>', '<ExcThread(monitor, started 139662664394496)>']
[2025-11-24 12:13:32] 2025-11-24 17:13:27,930 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 12:13:32] 2025-11-24 17:13:27,930 | INFO     | [monitor] control thread has ended
[2025-11-24 12:13:32] 2025-11-24 17:13:32,635 | INFO     | all workflow threads have been joined
[2025-11-24 12:13:32] 2025-11-24 17:13:32,636 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 12:13:32] 2025-11-24 17:13:32,636 | INFO     | traces error code: 0
[2025-11-24 12:13:32] 2025-11-24 17:13:32,636 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 12:13:32] 2025-11-24 17:13:32,737 [wrapper] ==== pilot stdout END ====
[2025-11-24 12:13:32] 2025-11-24 17:13:32,741 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 12:13:32] 2025-11-24 17:13:32,745 [wrapper] pilotpid: 22705
[2025-11-24 12:13:32] 2025-11-24 17:13:32,748 [wrapper] Pilot exit status: 0
[2025-11-24 12:13:32] 2025-11-24 17:13:32,762 [wrapper] pandaids: 6895348855
[2025-11-24 12:13:32] 2025-11-24 17:13:32,807 [wrapper] cleanup supervisor_pilot 29695 22706
[2025-11-24 12:13:32] 2025-11-24 17:13:32,812 [wrapper] Test setup, not cleaning
[2025-11-24 12:13:32] 2025-11-24 17:13:32,816 [wrapper] apfmon messages muted
[2025-11-24 12:13:32] 2025-11-24 17:13:32,820 [wrapper] ==== wrapper stdout END ====
[2025-11-24 12:13:32] 2025-11-24 17:13:32,823 [wrapper] ==== wrapper stderr END ====
[2025-11-24 12:13:32]  *** Error codes and diagnostics ***
[2025-11-24 12:13:32]     "exeErrorCode": 0,
[2025-11-24 12:13:32]     "exeErrorDiag": "",
[2025-11-24 12:13:32]     "pilotErrorCode": 0,
[2025-11-24 12:13:32]     "pilotErrorDiag": "",
[2025-11-24 12:13:32]  *** Listing of results directory ***
[2025-11-24 12:13:32] total 1326240
[2025-11-24 12:13:32] -rw-r--r-- 1 boincer umatlas    576529 Nov 22 14:25 pilot3.tar.gz
[2025-11-24 12:13:32] -rwx------ 1 boincer umatlas     36292 Nov 22 14:59 runpilot2-wrapper.sh
[2025-11-24 12:13:32] -rw-r--r-- 1 boincer umatlas      5112 Nov 22 14:59 queuedata.json
[2025-11-24 12:13:32] -rw-r--r-- 1 boincer umatlas       100 Nov 24 04:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 12:13:32] -rwxr-xr-x 1 boincer umatlas      7986 Nov 24 04:50 run_atlas
[2025-11-24 12:13:32] -rw-r--r-- 1 boincer umatlas       105 Nov 24 04:50 job.xml
[2025-11-24 12:13:32] -rw-r--r-- 2 boincer umatlas 411604180 Nov 24 04:50 EVNT.47483658._000486.pool.root.1
[2025-11-24 12:13:32] drwxrwx--x 2 boincer umatlas      4096 Nov 24 04:50 shared
[2025-11-24 12:13:32] -rw-r--r-- 2 boincer umatlas    590102 Nov 24 04:50 input.tar.gz
[2025-11-24 12:13:32] -rw-r--r-- 2 boincer umatlas     15847 Nov 24 04:50 start_atlas.sh
[2025-11-24 12:13:32] -rw-r--r-- 1 boincer umatlas         0 Nov 24 04:50 boinc_lockfile
[2025-11-24 12:13:32] -rw-r--r-- 1 boincer umatlas      2781 Nov 24 04:50 pandaJob.out
[2025-11-24 12:13:32] -rw------- 1 boincer umatlas        57 Nov 24 04:50 setup.sh.local
[2025-11-24 12:13:32] -rw------- 1 boincer umatlas    989824 Nov 24 04:50 agis_schedconf.cvmfs.json
[2025-11-24 12:13:32] drwx------ 5 boincer umatlas      4096 Nov 24 04:50 pilot3
[2025-11-24 12:13:32] -rw-r--r-- 1 boincer umatlas       532 Nov 24 12:00 boinc_task_state.xml
[2025-11-24 12:13:32] -rw------- 1 boincer umatlas 930764680 Nov 24 12:11 HITS.47556137._004811.pool.root.1
[2025-11-24 12:13:32] -rw------- 1 boincer umatlas      1061 Nov 24 12:12 memory_monitor_summary.json
[2025-11-24 12:13:32] -rw------- 1 boincer umatlas   1516227 Nov 24 12:12 agis_ddmendpoints.agis.ALL.json
[2025-11-24 12:13:32] -rw------- 1 boincer umatlas   2185957 Nov 24 12:12 log.47556137._004811.job.log.tgz.1
[2025-11-24 12:13:32] -rw------- 1 boincer umatlas      8673 Nov 24 12:12 heartbeat.json
[2025-11-24 12:13:32] -rw-r--r-- 1 boincer umatlas      5955 Nov 24 12:13 init_data.xml
[2025-11-24 12:13:32] -rw------- 1 boincer umatlas        95 Nov 24 12:13 pilot_heartbeat.json
[2025-11-24 12:13:32] -rw-r--r-- 1 boincer umatlas      8192 Nov 24 12:13 boinc_mmap_file
[2025-11-24 12:13:32] -rw-r--r-- 1 boincer umatlas        29 Nov 24 12:13 wrapper_checkpoint.txt
[2025-11-24 12:13:32] -rw------- 1 boincer umatlas      5004 Nov 24 12:13 pilotlog.txt
[2025-11-24 12:13:32] -rw------- 1 boincer umatlas   3707535 Nov 24 12:13 log.47556137._004811.job.log.1
[2025-11-24 12:13:32] -rw------- 1 boincer umatlas       353 Nov 24 12:13 output.list
[2025-11-24 12:13:32] -rw-r--r-- 1 boincer umatlas       620 Nov 24 12:13 runtime_log
[2025-11-24 12:13:32] -rw------- 1 boincer umatlas   5908480 Nov 24 12:13 result.tar.gz
[2025-11-24 12:13:32] -rw-r--r-- 1 boincer umatlas      9340 Nov 24 12:13 runtime_log.err
[2025-11-24 12:13:32] -rw------- 1 boincer umatlas       669 Nov 24 12:13 mwPNDmiw8g8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmjGIKDmchjLQo.diag
[2025-11-24 12:13:32] -rw-r--r-- 1 boincer umatlas     21323 Nov 24 12:13 stderr.txt
[2025-11-24 12:13:32] HITS file was successfully produced:
[2025-11-24 12:13:32] -rw------- 1 boincer umatlas 930764680 Nov 24 12:11 shared/HITS.pool.root.1
[2025-11-24 12:13:32]  *** Contents of shared directory: ***
[2025-11-24 12:13:32] total 1317284
[2025-11-24 12:13:32] -rw-r--r-- 2 boincer umatlas 411604180 Nov 24 04:50 ATLAS.root_0
[2025-11-24 12:13:32] -rw-r--r-- 2 boincer umatlas    590102 Nov 24 04:50 input.tar.gz
[2025-11-24 12:13:32] -rw-r--r-- 2 boincer umatlas     15847 Nov 24 04:50 start_atlas.sh
[2025-11-24 12:13:32] -rw------- 1 boincer umatlas 930764680 Nov 24 12:11 HITS.pool.root.1
[2025-11-24 12:13:32] -rw------- 1 boincer umatlas   5908480 Nov 24 12:13 result.tar.gz
12:13:34 (18986): run_atlas exited; CPU time 296095.159776
12:13:34 (18986): called boinc_finish(0)

</stderr_txt>
]]>

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