Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:13:15 (2005272): wrapper (7.7.26015): starting
01:13:15 (2005272): wrapper: running run_atlas (--nthreads 12)
[2025-11-24 01:13:16] Arguments: --nthreads 12
[2025-11-24 01:13:16] Threads: 12
[2025-11-24 01:13:16] Checking for CVMFS
[2025-11-24 01:13:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 01:13:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 01:13:16] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 01:13:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 01:13:17] 2.11.5.0 4091557 25023 187600 153239 1 175 28776503 45568000 16483 130560 0 193293159 99.755 137049521 22948 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-11-24 01:13:17] CVMFS is ok
[2025-11-24 01:13:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 01:13:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 01:13:17] Further information can be found at the LHC@home message board.
[2025-11-24 01:13:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 01:13:17] Checking for apptainer binary...
[2025-11-24 01:13:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 01:13:17] Running /usr/bin/apptainer --version
[2025-11-24 01:13:17] apptainer version 1.4.1-1.el9
[2025-11-24 01:13:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 01:13:18] wns0073.triumf.lcg
[2025-11-24 01:13:18] apptainer works
[2025-11-24 01:13:18] Set ATHENA_PROC_NUMBER=12
[2025-11-24 01:13:18] Set ATHENA_CORE_NUMBER=12
[2025-11-24 01:13:18] Starting ATLAS job with PandaID=6895373035
[2025-11-24 01:13:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 01:23:18]  *** The last 200 lines of the pilot log: ***
[2025-11-24 01:23:18] 2025-11-24 09:22:10,452 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-24 01:23:18] 2025-11-24 09:22:10,453 | WARNING  | wrong length of table data, x=[1763975777.0, 1763975838.0, 1763975899.0, 1763975960.0], y=[1633.0, 672739.0, 372228.0, 690582.0] (must be same and length>=4)
[2025-11-24 01:23:18] 2025-11-24 09:22:10,454 | INFO     | could have reported an average CPU frequency of 1299 MHz (4 samples)
[2025-11-24 01:23:18] 2025-11-24 09:22:10,470 | INFO     | ..............................
[2025-11-24 01:23:18] 2025-11-24 09:22:10,470 | INFO     | . Timing measurements:
[2025-11-24 01:23:18] 2025-11-24 09:22:10,471 | INFO     | . get job = 0 s
[2025-11-24 01:23:18] 2025-11-24 09:22:10,471 | INFO     | . initial setup = 4 s
[2025-11-24 01:23:18] 2025-11-24 09:22:10,471 | INFO     | . payload setup = 31 s
[2025-11-24 01:23:18] 2025-11-24 09:22:10,471 | INFO     | . stage-in = 0 s
[2025-11-24 01:23:18] 2025-11-24 09:22:10,471 | INFO     | . payload execution = 236 s
[2025-11-24 01:23:18] 2025-11-24 09:22:10,471 | INFO     | . stage-out = 1 s
[2025-11-24 01:23:18] 2025-11-24 09:22:10,471 | INFO     | . log creation = 0 s
[2025-11-24 01:23:18] 2025-11-24 09:22:10,471 | INFO     | ..............................
[2025-11-24 01:23:18] 2025-11-24 09:22:10,487 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-24 01:23:18] 2025-11-24 09:22:10,488 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6895373035/pilotlog.txt
[2025-11-24 01:23:18] 2025-11-24 09:22:10,546 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-11-24 01:23:18] - Log from pilotlog.txt -
[2025-11-24 01:23:18] 2025-11-24 09:22:10,439 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6895373035/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 01:23:18] 2025-11-24 09:22:10,451 | INFO     | extracted standard info from prmon json
[2025-11-24 01:23:18] 2025-11-24 09:22:10,451 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 01:23:18] 2025-11-24 09:22:10,451 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 01:23:18] 2025-11-24 09:22:10,452 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-24 01:23:18] 2025-11-24 09:22:10,452 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-24 01:23:18] 2025-11-24 09:22:10,453 | WARNING  | wrong length of table data, x=[1763975777.0, 1763975838.0, 1763975899.0, 1763975960.0], y=[1633.0, 672739.0, 372228.0, 690582.0] (must be same and length>=4)
[2025-11-24 01:23:18] 2025-11-24 09:22:10,454 | INFO     | could have reported an average CPU frequency of 1299 MHz (4 samples)
[2025-11-24 01:23:18] 2025-11-24 09:22:10,470 | INFO     | ..............................
[2025-11-24 01:23:18] 2025-11-24 09:22:10,470 | INFO     | . Timing measurements:
[2025-11-24 01:23:18] 2025-11-24 09:22:10,471 | INFO     | . get job = 0 s
[2025-11-24 01:23:18] 2025-11-24 09:22:10,471 | INFO     | . initial setup = 4 s
[2025-11-24 01:23:18] 2025-11-24 09:22:10,471 | INFO     | . payload setup = 31 s
[2025-11-24 01:23:18] 2025-11-24 09:22:10,471 | INFO     | . stage-in = 0 s
[2025-11-24 01:23:18] 2025-11-24 09:22:10,471 | INFO     | . payload execution = 236 s
[2025-11-24 01:23:18] 2025-11-24 09:22:10,471 | INFO     | . stage-out = 1 s
[2025-11-24 01:23:18] 2025-11-24 09:22:10,471 | INFO     | . log creation = 0 s
[2025-11-24 01:23:18] 2025-11-24 09:22:10,471 | INFO     | ..............................
[2025-11-24 01:23:18] 2025-11-24 09:22:10,487 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-24 01:23:18] 2025-11-24 09:22:10,488 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6895373035/pilotlog.txt
[2025-11-24 01:23:18] 2025-11-24 09:22:10,547 | WARNING  | 
[2025-11-24 01:23:18] [begin log extracts]
[2025-11-24 01:23:18] - Log from pilotlog.txt -
[2025-11-24 01:23:18] 2025-11-24 09:22:10,439 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6895373035/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 01:23:18] 2025-11-24 09:22:10,451 | INFO     | extracted standard info from prmon json
[2025-11-24 01:23:18] 2025-11-24 09:22:10,451 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 01:23:18] 2025-11-24 09:22:10,451 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 01:23:18] 2025-11-24 09:22:10,452 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-24 01:23:18] 2025-11-24 09:22:10,452 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-24 01:23:18] 2025-11-24 09:22:10,453 | WARNING  | wrong length of table data, x=[1763975777.0, 1763975838.0, 1763975899.0, 1763975960.0], y=[1633.0, 672739.0, 372228.0, 690582.0] (must be same and length>=4)
[2025-11-24 01:23:18] 2025-11-24 09:22:10,454 | INFO     | could have reported an average CPU frequency of 1299 MHz (4 samples)
[2025-11-24 01:23:18] 2025-11-24 09:22:10,470 | INFO     | ..............................
[2025-11-24 01:23:18] 2025-11-24 09:22:10,470 | INFO     | . Timing measurements:
[2025-11-24 01:23:18] 2025-11-24 09:22:10,471 | INFO     | . get job = 0 s
[2025-11-24 01:23:18] 2025-11-24 09:22:10,471 | INFO     | . initial setup = 4 s
[2025-11-24 01:23:18] 2025-11-24 09:22:10,471 | INFO     | . payload setup = 31 s
[2025-11-24 01:23:18] 2025-11-24 09:22:10,471 | INFO     | . stage-in = 0 s
[2025-11-24 01:23:18] 2025-11-24 09:22:10,471 | INFO     | . payload execution = 236 s
[2025-11-24 01:23:18] 2025-11-24 09:22:10,471 | INFO     | . stage-out = 1 s
[2025-11-24 01:23:18] 2025-11-24 09:22:10,471 | INFO     | . log creation = 0 s
[2025-11-24 01:23:18] 2025-11-24 09:22:10,471 | INFO     | ..............................
[2025-11-24 01:23:18] 2025-11-24 09:22:10,487 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-24 01:23:18] 2025-11-24 09:22:10,488 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6895373035/pilotlog.txt
[2025-11-24 01:23:18] [end log extracts]
[2025-11-24 01:23:18] 2025-11-24 09:22:10,547 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2025-11-24 01:23:18] 2025-11-24 09:22:10,549 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-11-24 01:23:18] 2025-11-24 09:22:11,068 | INFO     | 
[2025-11-24 01:23:18] 2025-11-24 09:22:11,068 | INFO     | job summary report
[2025-11-24 01:23:18] 2025-11-24 09:22:11,068 | INFO     | --------------------------------------------------
[2025-11-24 01:23:18] 2025-11-24 09:22:11,069 | INFO     | PanDA job id: 6895373035
[2025-11-24 01:23:18] 2025-11-24 09:22:11,069 | INFO     | task id: 47556137
[2025-11-24 01:23:18] 2025-11-24 09:22:11,069 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-11-24 01:19:35,096 CRITICAL Transform executor raised TransformValidationExceptio
[2025-11-24 01:23:18] 2025-11-24 09:22:11,069 | INFO     | error 2/2: 1165: Local output file is missing
[2025-11-24 01:23:18] 2025-11-24 09:22:11,069 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 01:23:18] 2025-11-24 09:22:11,069 | INFO     | pilot state: failed 
[2025-11-24 01:23:18] 2025-11-24 09:22:11,069 | INFO     | transexitcode: 65
[2025-11-24 01:23:18] 2025-11-24 09:22:11,069 | INFO     | exeerrorcode: 65
[2025-11-24 01:23:18] 2025-11-24 09:22:11,069 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFL
[2025-11-24 01:23:18] 2025-11-24 09:22:11,069 | INFO     | exitcode: 65
[2025-11-24 01:23:18] 2025-11-24 09:22:11,070 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 
[2025-11-24 01:23:18] 2025-11-24 09:22:11,070 | INFO     | cpuconsumptiontime: 80 s
[2025-11-24 01:23:18] 2025-11-24 09:22:11,070 | INFO     | nevents: 0
[2025-11-24 01:23:18] 2025-11-24 09:22:11,070 | INFO     | neventsw: 0
[2025-11-24 01:23:18] 2025-11-24 09:22:11,070 | INFO     | pid: 2022988
[2025-11-24 01:23:18] 2025-11-24 09:22:11,070 | INFO     | pgrp: 2022988
[2025-11-24 01:23:18] 2025-11-24 09:22:11,070 | INFO     | corecount: 12
[2025-11-24 01:23:18] 2025-11-24 09:22:11,070 | INFO     | event service: False
[2025-11-24 01:23:18] 2025-11-24 09:22:11,070 | INFO     | sizes: {0: 2298627, 1: 2298826, 13: 2298826, 23: 2298882, 26: 2299172, 34: 2299200, 271: 2324802, 272: 2324806, 277: 2329152, 280: 2329208, 418: 2329402}
[2025-11-24 01:23:18] 2025-11-24 09:22:11,070 | INFO     | --------------------------------------------------
[2025-11-24 01:23:18] 2025-11-24 09:22:11,070 | INFO     | 
[2025-11-24 01:23:18] 2025-11-24 09:22:11,071 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-11-24 01:23:18] 2025-11-24 09:22:11,192 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 01:23:18] 2025-11-24 09:22:11,193 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 01:23:18] 2025-11-24 09:22:11,193 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 01:23:18] 2025-11-24 09:22:11,193 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 01:23:18] 2025-11-24 09:22:11,193 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 01:23:18] 2025-11-24 09:22:11,193 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 01:23:18] 2025-11-24 09:22:11,193 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 01:23:18] 2025-11-24 09:22:11,194 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 01:23:18] 2025-11-24 09:22:11,194 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 01:23:18] 2025-11-24 09:22:11,194 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 01:23:18] 2025-11-24 09:22:11,194 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 01:23:18] 2025-11-24 09:22:11,194 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 01:23:18] 2025-11-24 09:22:11,194 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 01:23:18] 2025-11-24 09:22:11,194 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 01:23:18] 2025-11-24 09:22:11,194 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 01:23:18] 2025-11-24 09:22:11,194 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 01:23:18] 2025-11-24 09:22:11,194 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 01:23:18] 2025-11-24 09:22:11,194 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 01:23:18] 2025-11-24 09:22:11,195 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 01:23:18] 2025-11-24 09:22:11,195 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 01:23:18] 2025-11-24 09:22:11,195 | INFO     | job 6895373035 has completed (purged errors)
[2025-11-24 01:23:18] 2025-11-24 09:22:11,195 | INFO     | overall cleanup function is called
[2025-11-24 01:23:18] 2025-11-24 09:22:12,250 | INFO     | --- collectZombieJob: --- 10, [2022988]
[2025-11-24 01:23:18] 2025-11-24 09:22:12,250 | INFO     | zombie collector waiting for pid 2022988
[2025-11-24 01:23:18] 2025-11-24 09:22:12,251 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 01:23:18] 2025-11-24 09:22:12,252 | INFO     | collected zombie processes
[2025-11-24 01:23:18] 2025-11-24 09:22:12,252 | INFO     | will attempt to kill all subprocesses of pid=2022988
[2025-11-24 01:23:18] 2025-11-24 09:22:13,666 | INFO     | process IDs to be killed: [2022988] (in reverse order)
[2025-11-24 01:23:18] 2025-11-24 09:22:13,897 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 01:23:18] 2025-11-24 09:22:13,898 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 01:23:18] 2025-11-24 09:22:13,933 | INFO     | did not find any defunct processes belonging to 2022988
[2025-11-24 01:23:18] 2025-11-24 09:22:13,958 | INFO     | did not find any defunct processes belonging to 2022988
[2025-11-24 01:23:18] 2025-11-24 09:22:13,959 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 01:23:18] 2025-11-24 09:22:13,960 | INFO     | ready for new job
[2025-11-24 01:23:18] 2025-11-24 09:22:13,960 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 01:23:18] 2025-11-24 09:22:13,962 | INFO     | ***************************************
[2025-11-24 01:23:18] 2025-11-24 09:22:13,962 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 01:23:18] 2025-11-24 09:22:13,962 | INFO     | ***************************************
[2025-11-24 01:23:18] 2025-11-24 09:22:13,962 | INFO     | 
[2025-11-24 01:23:18] 2025-11-24 09:22:13,966 | INFO     | architecture information:
[2025-11-24 01:23:18] 2025-11-24 09:22:13,981 | INFO     | executing command: cat /etc/os-release
[2025-11-24 01:23:18] 2025-11-24 09:22:14,027 | INFO     | cat /etc/os-release:
[2025-11-24 01:23:18] NAME="CentOS Linux"
[2025-11-24 01:23:18] VERSION="7 (Core)"
[2025-11-24 01:23:18] ID="centos"
[2025-11-24 01:23:18] ID_LIKE="rhel fedora"
[2025-11-24 01:23:18] VERSION_ID="7"
[2025-11-24 01:23:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 01:23:18] ANSI_COLOR="0;31"
[2025-11-24 01:23:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 01:23:18] HOME_URL="https://www.centos.org/"
[2025-11-24 01:23:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 01:23:18] 
[2025-11-24 01:23:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 01:23:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 01:23:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 01:23:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 01:23:18] 
[2025-11-24 01:23:18] 2025-11-24 09:22:14,027 | INFO     | ***************************************
[2025-11-24 01:23:18] 2025-11-24 09:22:14,531 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-11-24 01:23:18] 2025-11-24 09:22:14,582 | INFO     | sufficient remaining disk space (618860118016 B)
[2025-11-24 01:23:18] 2025-11-24 09:22:14,582 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 01:23:18] 2025-11-24 09:22:14,583 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 01:23:18] 2025-11-24 09:22:14,583 | INFO     | update_server=False
[2025-11-24 01:23:18] 2025-11-24 09:22:14,583 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 01:23:18] 2025-11-24 09:22:14,584 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 01:23:18] 2025-11-24 09:22:14,782 | INFO     | all payload control threads have been joined
[2025-11-24 01:23:18] 2025-11-24 09:22:15,082 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 01:23:18] 2025-11-24 09:22:15,082 | INFO     | aborting loop
[2025-11-24 01:23:18] 2025-11-24 09:22:15,152 | INFO     | all job control threads have been joined
[2025-11-24 01:23:18] 2025-11-24 09:22:15,589 | INFO     | [job] retrieve thread has finished
[2025-11-24 01:23:18] 2025-11-24 09:22:15,677 | INFO     | all data control threads have been joined
[2025-11-24 01:23:18] 2025-11-24 09:22:15,696 | INFO     | [job] validate thread has finished
[2025-11-24 01:23:18] 2025-11-24 09:22:15,700 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 01:23:18] 2025-11-24 09:22:15,788 | INFO     | [payload] control thread has finished
[2025-11-24 01:23:18] 2025-11-24 09:22:15,825 | INFO     | [data] copytool_in thread has finished
[2025-11-24 01:23:18] 2025-11-24 09:22:16,064 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 01:23:18] 2025-11-24 09:22:16,088 | INFO     | [job] job monitor thread has finished
[2025-11-24 01:23:18] 2025-11-24 09:22:16,158 | INFO     | [job] control thread has finished
[2025-11-24 01:23:18] 2025-11-24 09:22:16,205 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 01:23:18] 2025-11-24 09:22:16,217 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 01:23:18] 2025-11-24 09:22:16,261 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 01:23:18] 2025-11-24 09:22:16,263 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 01:23:18] 2025-11-24 09:22:16,592 | INFO     | [payload] failed_post thread has finished
[2025-11-24 01:23:18] 2025-11-24 09:22:16,683 | INFO     | [data] control thread has finished
[2025-11-24 01:23:18] 2025-11-24 09:22:16,717 | INFO     | [payload] validate_post thread has finished
[2025-11-24 01:23:18] 2025-11-24 09:22:17,070 | INFO     | [job] queue monitor thread has finished
[2025-11-24 01:23:18] 2025-11-24 09:22:17,707 | INFO     | [data] copytool_out thread has finished
[2025-11-24 01:23:18] 2025-11-24 09:22:18,599 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 01:23:18] 2025-11-24 09:22:43,844 | INFO     | PID=2009097 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-24 01:23:18] 2025-11-24 09:22:43,844 | INFO     | .. there are 28 such processes running
[2025-11-24 01:23:18] 2025-11-24 09:22:43,845 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 01:23:18] 2025-11-24 09:22:43,845 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 01:23:18] 2025-11-24 09:22:43,845 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 01:23:18] 2025-11-24 09:23:11,723 | INFO     | [monitor] cgroup control has ended
[2025-11-24 01:23:18] 2025-11-24 09:23:12,624 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140544412145472)>', '<ExcThread(monitor, started 140543199799040)>']
[2025-11-24 01:23:18] 2025-11-24 09:23:13,021 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 01:23:18] 2025-11-24 09:23:13,021 | INFO     | [monitor] control thread has ended
[2025-11-24 01:23:18] 2025-11-24 09:23:17,650 | INFO     | all workflow threads have been joined
[2025-11-24 01:23:18] 2025-11-24 09:23:17,650 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 01:23:18] 2025-11-24 09:23:17,651 | INFO     | traces error code: 0
[2025-11-24 01:23:18] 2025-11-24 09:23:17,651 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 01:23:18] 2025-11-24 09:23:17,830 [wrapper] ==== pilot stdout END ====
[2025-11-24 01:23:18] 2025-11-24 09:23:17,834 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 01:23:18] 2025-11-24 09:23:17,837 [wrapper] pilotpid: 2009097
[2025-11-24 01:23:18] 2025-11-24 09:23:17,840 [wrapper] Pilot exit status: 0
[2025-11-24 01:23:18] 2025-11-24 09:23:17,869 [wrapper] pandaids: 6895373035
[2025-11-24 01:23:18] 2025-11-24 09:23:17,956 [wrapper] cleanup supervisor_pilot 2009104 2009098
[2025-11-24 01:23:18] 2025-11-24 09:23:17,960 [wrapper] Test setup, not cleaning
[2025-11-24 01:23:18] 2025-11-24 09:23:17,963 [wrapper] apfmon messages muted
[2025-11-24 01:23:18] 2025-11-24 09:23:17,967 [wrapper] ==== wrapper stdout END ====
[2025-11-24 01:23:18] 2025-11-24 09:23:17,972 [wrapper] ==== wrapper stderr END ====
[2025-11-24 01:23:18]  *** Error codes and diagnostics ***
[2025-11-24 01:23:18]     "exeErrorCode": 65,
[2025-11-24 01:23:18]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 cannot be opened - STOP\"",
[2025-11-24 01:23:18]     "pilotErrorCode": 1305,
[2025-11-24 01:23:18]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 canno",
[2025-11-24 01:23:18]  *** Listing of results directory ***
[2025-11-24 01:23:18] total 403160
[2025-11-24 01:23:18] -rw-r--r--. 1 boinc boinc    576529 Nov 23 14:28 pilot3.tar.gz
[2025-11-24 01:23:18] -rwx------. 1 boinc boinc     36292 Nov 23 14:29 runpilot2-wrapper.sh
[2025-11-24 01:23:18] -rw-r--r--. 1 boinc boinc      5112 Nov 23 14:29 queuedata.json
[2025-11-24 01:23:18] -rw-r--r--. 1 boinc boinc       100 Nov 24 01:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 01:23:18] -rwxr-xr-x. 1 boinc boinc      7986 Nov 24 01:13 run_atlas
[2025-11-24 01:23:18] -rw-r--r--. 1 boinc boinc       105 Nov 24 01:13 job.xml
[2025-11-24 01:23:18] -rw-r--r--. 2 boinc boinc 408568539 Nov 24 01:13 EVNT.47483658._000923.pool.root.1
[2025-11-24 01:23:18] -rw-r--r--. 1 boinc boinc      6593 Nov 24 01:13 init_data.xml
[2025-11-24 01:23:18] -rw-r--r--. 2 boinc boinc    590100 Nov 24 01:13 input.tar.gz
[2025-11-24 01:23:18] -rw-r--r--. 2 boinc boinc     15847 Nov 24 01:13 start_atlas.sh
[2025-11-24 01:23:18] drwxrwx--x. 2 boinc boinc      4096 Nov 24 01:13 shared
[2025-11-24 01:23:18] -rw-r--r--. 1 boinc boinc         0 Nov 24 01:13 boinc_lockfile
[2025-11-24 01:23:18] -rw-r--r--. 1 boinc boinc      2783 Nov 24 01:13 pandaJob.out
[2025-11-24 01:23:18] -rw-------. 1 boinc boinc    989794 Nov 24 01:14 agis_schedconf.cvmfs.json
[2025-11-24 01:23:18] -rw-------. 1 boinc boinc   1526164 Nov 24 01:14 agis_ddmendpoints.agis.ALL.json
[2025-11-24 01:23:18] drwx------. 5 boinc boinc      4096 Nov 24 01:14 pilot3
[2025-11-24 01:23:18] -rw-r--r--. 1 boinc boinc       524 Nov 24 01:18 boinc_task_state.xml
[2025-11-24 01:23:18] -rw-------. 1 boinc boinc      1016 Nov 24 01:19 memory_monitor_summary.json
[2025-11-24 01:23:18] -rw-------. 1 boinc boinc     51440 Nov 24 01:19 log.47556137._009091.job.log.tgz.1
[2025-11-24 01:23:18] -rw-------. 1 boinc boinc     10336 Nov 24 01:22 heartbeat.json
[2025-11-24 01:23:18] -rw-------. 1 boinc boinc        95 Nov 24 01:22 pilot_heartbeat.json
[2025-11-24 01:23:18] -rw-r--r--. 1 boinc boinc      8192 Nov 24 01:23 boinc_mmap_file
[2025-11-24 01:23:18] -rw-r--r--. 1 boinc boinc        23 Nov 24 01:23 wrapper_checkpoint.txt
[2025-11-24 01:23:18] -rw-------. 1 boinc boinc      4822 Nov 24 01:23 pilotlog.txt
[2025-11-24 01:23:18] -rw-------. 1 boinc boinc    121406 Nov 24 01:23 log.47556137._009091.job.log.1
[2025-11-24 01:23:18] -rw-------. 1 boinc boinc       186 Nov 24 01:23 output.list
[2025-11-24 01:23:18] -rw-r--r--. 1 boinc boinc       620 Nov 24 01:23 runtime_log
[2025-11-24 01:23:18] -rw-------. 1 boinc boinc    194560 Nov 24 01:23 result.tar.gz
[2025-11-24 01:23:18] -rw-------. 1 boinc boinc       647 Nov 24 01:23 zkfMDmulXh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmpELKDms8hrQo.diag
[2025-11-24 01:23:18] -rw-r--r--. 1 boinc boinc      8636 Nov 24 01:23 runtime_log.err
[2025-11-24 01:23:18] -rw-r--r--. 1 boinc boinc     22671 Nov 24 01:23 stderr.txt
[2025-11-24 01:23:18] No HITS result produced
[2025-11-24 01:23:18]  *** Contents of shared directory: ***
[2025-11-24 01:23:18] total 399788
[2025-11-24 01:23:18] -rw-r--r--. 2 boinc boinc 408568539 Nov 24 01:13 ATLAS.root_0
[2025-11-24 01:23:18] -rw-r--r--. 2 boinc boinc    590100 Nov 24 01:13 input.tar.gz
[2025-11-24 01:23:18] -rw-r--r--. 2 boinc boinc     15847 Nov 24 01:13 start_atlas.sh
[2025-11-24 01:23:18] -rw-------. 1 boinc boinc    194560 Nov 24 01:23 result.tar.gz
01:23:19 (2005272): run_atlas exited; CPU time 85.644084
01:23:19 (2005272): called boinc_finish(0)

</stderr_txt>
]]>

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