Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
09:57:43 (1612758): wrapper (7.7.26015): starting
09:57:43 (1612758): wrapper: running run_atlas (--nthreads 3)
[2025-11-24 09:57:43] Arguments: --nthreads 3
[2025-11-24 09:57:43] Threads: 3
[2025-11-24 09:57:43] Checking for CVMFS
[2025-11-24 09:57:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 09:57:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 09:57:43] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 09:57:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 09:57:43] 2.9.2.0 154488 552 66984 153239 1 88 34977737 36864000 0 130560 0 4356764 99.999 17090 9590 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-24 09:57:43] CVMFS is ok
[2025-11-24 09:57:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 09:57:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 09:57:43] Further information can be found at the LHC@home message board.
[2025-11-24 09:57:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 09:57:43] Checking for apptainer binary...
[2025-11-24 09:57:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 09:57:43] Running /usr/bin/apptainer --version
[2025-11-24 09:57:43] apptainer version 1.4.1-1.1
[2025-11-24 09:57:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 09:57:43] thA335
[2025-11-24 09:57:43] apptainer works
[2025-11-24 09:57:43] Set ATHENA_PROC_NUMBER=3
[2025-11-24 09:57:43] Set ATHENA_CORE_NUMBER=3
[2025-11-24 09:57:43] Starting ATLAS job with PandaID=6895358606
[2025-11-24 09:57:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 10:01:59]  *** The last 200 lines of the pilot log: ***
[2025-11-24 10:01:59] 2025-11-24 09:01:05,513 | INFO     | executing command: cat /etc/os-release
[2025-11-24 10:01:59] 2025-11-24 09:01:05,522 | INFO     | cat /etc/os-release:
[2025-11-24 10:01:59] NAME="CentOS Linux"
[2025-11-24 10:01:59] VERSION="7 (Core)"
[2025-11-24 10:01:59] ID="centos"
[2025-11-24 10:01:59] ID_LIKE="rhel fedora"
[2025-11-24 10:01:59] VERSION_ID="7"
[2025-11-24 10:01:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 10:01:59] ANSI_COLOR="0;31"
[2025-11-24 10:01:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 10:01:59] HOME_URL="https://www.centos.org/"
[2025-11-24 10:01:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 10:01:59] 
[2025-11-24 10:01:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 10:01:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 10:01:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 10:01:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 10:01:59] 
[2025-11-24 10:01:59] 2025-11-24 09:01:05,523 | INFO     | ***************************************
[2025-11-24 10:01:59] 2025-11-24 09:01:06,026 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-24 10:01:59] 2025-11-24 09:01:06,039 | INFO     | sufficient remaining disk space (826652229632 B)
[2025-11-24 10:01:59] 2025-11-24 09:01:06,040 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 10:01:59] 2025-11-24 09:01:06,040 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 10:01:59] 2025-11-24 09:01:06,040 | INFO     | update_server=False
[2025-11-24 10:01:59] 2025-11-24 09:01:06,040 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 10:01:59] 2025-11-24 09:01:06,040 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 10:01:59] 2025-11-24 09:01:06,040 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 10:01:59] 2025-11-24 09:01:06,645 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 10:01:59] 2025-11-24 09:01:06,645 | INFO     | aborting loop
[2025-11-24 10:01:59] 2025-11-24 09:01:07,038 | INFO     | all payload control threads have been joined
[2025-11-24 10:01:59] 2025-11-24 09:01:07,046 | INFO     | [job] queue monitor thread has finished
[2025-11-24 10:01:59] 2025-11-24 09:01:07,047 | INFO     | [job] retrieve thread has finished
[2025-11-24 10:01:59] 2025-11-24 09:01:07,106 | INFO     | all data control threads have been joined
[2025-11-24 10:01:59] 2025-11-24 09:01:07,274 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 10:01:59] 2025-11-24 09:01:07,396 | INFO     | all job control threads have been joined
[2025-11-24 10:01:59] 2025-11-24 09:01:07,436 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 10:01:59] 2025-11-24 09:01:07,462 | INFO     | [data] copytool_in thread has finished
[2025-11-24 10:01:59] 2025-11-24 09:01:07,527 | INFO     | [payload] validate_post thread has finished
[2025-11-24 10:01:59] 2025-11-24 09:01:07,651 | INFO     | [job] job monitor thread has finished
[2025-11-24 10:01:59] 2025-11-24 09:01:08,028 | INFO     | [job] validate thread has finished
[2025-11-24 10:01:59] 2025-11-24 09:01:08,044 | INFO     | [payload] control thread has finished
[2025-11-24 10:01:59] 2025-11-24 09:01:08,103 | INFO     | [payload] failed_post thread has finished
[2025-11-24 10:01:59] 2025-11-24 09:01:08,107 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 10:01:59] 2025-11-24 09:01:08,111 | INFO     | [data] control thread has finished
[2025-11-24 10:01:59] 2025-11-24 09:01:08,171 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 10:01:59] 2025-11-24 09:01:08,388 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 10:01:59] 2025-11-24 09:01:08,400 | INFO     | [job] control thread has finished
[2025-11-24 10:01:59] 2025-11-24 09:01:09,442 | INFO     | [data] copytool_out thread has finished
[2025-11-24 10:01:59] 2025-11-24 09:01:10,047 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 10:01:59] 2025-11-24 09:01:35,618 | INFO     | PID=1616485 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-24 10:01:59] 2025-11-24 09:01:35,618 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 10:01:59] 2025-11-24 09:01:35,618 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 10:01:59] 2025-11-24 09:01:35,618 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 10:01:59] 2025-11-24 09:01:52,787 | INFO     | [monitor] cgroup control has ended
[2025-11-24 10:01:59] 2025-11-24 09:01:53,793 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139644258105152)>', '<ExcThread(monitor, started 139643395757824)>']
[2025-11-24 10:01:59] 2025-11-24 09:01:54,720 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 10:01:59] 2025-11-24 09:01:54,720 | INFO     | [monitor] control thread has ended
[2025-11-24 10:01:59] 2025-11-24 09:01:58,807 | INFO     | all workflow threads have been joined
[2025-11-24 10:01:59] 2025-11-24 09:01:58,808 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 10:01:59] 2025-11-24 09:01:58,808 | INFO     | traces error code: 0
[2025-11-24 10:01:59] 2025-11-24 09:01:58,809 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 10:01:59] 2025-11-24 09:01:58,854 [wrapper] ==== pilot stdout END ====
[2025-11-24 10:01:59] 2025-11-24 09:01:58,858 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 10:01:59] 2025-11-24 09:01:58,861 [wrapper] pilotpid: 1616485
[2025-11-24 10:01:59] 2025-11-24 09:01:58,864 [wrapper] Pilot exit status: 0
[2025-11-24 10:01:59] 2025-11-24 09:01:58,871 [wrapper] pandaids: 6895358606
[2025-11-24 10:01:59] 2025-11-24 09:01:58,888 [wrapper] cleanup supervisor_pilot 1616491 1616486
[2025-11-24 10:01:59] 2025-11-24 09:01:58,890 [wrapper] Test setup, not cleaning
[2025-11-24 10:01:59] 2025-11-24 09:01:58,893 [wrapper] apfmon messages muted
[2025-11-24 10:01:59] 2025-11-24 09:01:58,896 [wrapper] ==== wrapper stdout END ====
[2025-11-24 10:01:59] 2025-11-24 09:01:58,898 [wrapper] ==== wrapper stderr END ====
[2025-11-24 10:01:59]  *** Error codes and diagnostics ***
[2025-11-24 10:01:59]     "exeErrorCode": 65,
[2025-11-24 10:01:59]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"problem in C++; program state has been reset\"",
[2025-11-24 10:01:59]     "pilotErrorCode": 1305,
[2025-11-24 10:01:59]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"problem in C++; program state has been reset\"",
[2025-11-24 10:01:59]  *** Listing of results directory ***
[2025-11-24 10:01:59] total 402520
[2025-11-24 10:01:59] -rw-r--r-- 1 boinc boinc    576529 Nov 23 13:50 pilot3.tar.gz
[2025-11-24 10:01:59] -rwx------ 1 boinc boinc     36292 Nov 23 13:59 runpilot2-wrapper.sh
[2025-11-24 10:01:59] -rw-r--r-- 1 boinc boinc      5112 Nov 23 13:59 queuedata.json
[2025-11-24 10:01:59] -rw-r--r-- 1 boinc boinc       100 Nov 24 09:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 10:01:59] -rwxr-xr-x 1 boinc boinc      7986 Nov 24 09:57 run_atlas
[2025-11-24 10:01:59] -rw-r--r-- 1 boinc boinc       105 Nov 24 09:57 job.xml
[2025-11-24 10:01:59] -rw-r--r-- 2 boinc boinc 407983507 Nov 24 09:57 EVNT.47483658._000737.pool.root.1
[2025-11-24 10:01:59] -rw-r--r-- 2 boinc boinc    590098 Nov 24 09:57 input.tar.gz
[2025-11-24 10:01:59] -rw-r--r-- 2 boinc boinc     15847 Nov 24 09:57 start_atlas.sh
[2025-11-24 10:01:59] drwxrwx--x 2 boinc boinc      4096 Nov 24 09:57 shared
[2025-11-24 10:01:59] -rw-r--r-- 1 boinc boinc         0 Nov 24 09:57 boinc_setup_complete
[2025-11-24 10:01:59] -rw-r--r-- 1 boinc boinc      6195 Nov 24 09:57 init_data.xml
[2025-11-24 10:01:59] -rw-r--r-- 1 boinc boinc         0 Nov 24 09:57 boinc_lockfile
[2025-11-24 10:01:59] -rw-r--r-- 1 boinc boinc      2786 Nov 24 09:57 pandaJob.out
[2025-11-24 10:01:59] -rw------- 1 boinc boinc    989794 Nov 24 09:57 agis_schedconf.cvmfs.json
[2025-11-24 10:01:59] -rw------- 1 boinc boinc   1526164 Nov 24 09:57 agis_ddmendpoints.agis.ALL.json
[2025-11-24 10:01:59] drwx------ 5 boinc boinc      4096 Nov 24 09:57 pilot3
[2025-11-24 10:01:59] -rw-r--r-- 1 boinc boinc       522 Nov 24 09:58 boinc_task_state.xml
[2025-11-24 10:01:59] -rw------- 1 boinc boinc       977 Nov 24 09:58 memory_monitor_summary.json
[2025-11-24 10:01:59] -rw------- 1 boinc boinc     54324 Nov 24 09:58 log.47556137._007329.job.log.tgz.1
[2025-11-24 10:01:59] -rw------- 1 boinc boinc        95 Nov 24 10:00 pilot_heartbeat.json
[2025-11-24 10:01:59] -rw------- 1 boinc boinc      8384 Nov 24 10:01 heartbeat.json
[2025-11-24 10:01:59] -rw-r--r-- 1 boinc boinc      8192 Nov 24 10:01 boinc_mmap_file
[2025-11-24 10:01:59] -rw-r--r-- 1 boinc boinc        22 Nov 24 10:01 wrapper_checkpoint.txt
[2025-11-24 10:01:59] -rw------- 1 boinc boinc      4752 Nov 24 10:01 pilotlog.txt
[2025-11-24 10:01:59] -rw------- 1 boinc boinc     91909 Nov 24 10:01 log.47556137._007329.job.log.1
[2025-11-24 10:01:59] -rw------- 1 boinc boinc       186 Nov 24 10:01 output.list
[2025-11-24 10:01:59] -rw-r--r-- 1 boinc boinc       620 Nov 24 10:01 runtime_log
[2025-11-24 10:01:59] -rw------- 1 boinc boinc    163840 Nov 24 10:01 result.tar.gz
[2025-11-24 10:01:59] -rw------- 1 boinc boinc       649 Nov 24 10:01 bHgLDm7rOh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmtXIKDmFuTjZn.diag
[2025-11-24 10:01:59] -rw-r--r-- 1 boinc boinc      8744 Nov 24 10:01 runtime_log.err
[2025-11-24 10:01:59] -rw-r--r-- 1 boinc boinc      9258 Nov 24 10:01 stderr.txt
[2025-11-24 10:01:59] No HITS result produced
[2025-11-24 10:01:59]  *** Contents of shared directory: ***
[2025-11-24 10:01:59] total 399184
[2025-11-24 10:01:59] -rw-r--r-- 2 boinc boinc 407983507 Nov 24 09:57 ATLAS.root_0
[2025-11-24 10:01:59] -rw-r--r-- 2 boinc boinc    590098 Nov 24 09:57 input.tar.gz
[2025-11-24 10:01:59] -rw-r--r-- 2 boinc boinc     15847 Nov 24 09:57 start_atlas.sh
[2025-11-24 10:01:59] -rw------- 1 boinc boinc    163840 Nov 24 10:01 result.tar.gz
10:02:00 (1612758): run_atlas exited; CPU time 30.421119
10:02:00 (1612758): called boinc_finish(0)

</stderr_txt>
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