Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
04:29:32 (25256): wrapper (7.7.26015): starting
04:29:32 (25256): wrapper: running run_atlas (--nthreads 12)
[2025-11-25 04:29:32] Arguments: --nthreads 12
[2025-11-25 04:29:32] Threads: 12
[2025-11-25 04:29:32] Checking for CVMFS
[2025-11-25 04:29:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 04:29:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 04:29:52] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 04:29:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 04:29:53] 2.13.3.0 25473 0 25580 153268 3 1 3934207 20480001 0 130560 0 0 0.000 1291 227 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch DIRECT 1
[2025-11-25 04:29:53] CVMFS is ok
[2025-11-25 04:29:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 04:29:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 04:29:53] Small home clusters do not require a local http proxy but it is suggested if
[2025-11-25 04:29:53] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-11-25 04:29:53] Further information can be found at the LHC@home message board.
[2025-11-25 04:29:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 04:29:53] Checking for apptainer binary...
[2025-11-25 04:29:53] apptainer is not installed, using version from CVMFS
[2025-11-25 04:29:53] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 04:29:54] pascal-Intel-Z790-Workstation
[2025-11-25 04:29:54] apptainer works
[2025-11-25 04:29:54] Set ATHENA_PROC_NUMBER=12
[2025-11-25 04:29:54] Set ATHENA_CORE_NUMBER=12
[2025-11-25 04:29:54] Starting ATLAS job with PandaID=6895358618
[2025-11-25 04:29:54] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/22 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 10:19:13]  *** The last 200 lines of the pilot log: ***
[2025-11-25 10:19:13] 2025-11-25 09:18:38,086 | INFO     | time since job start (20895s) is within the limit (172800.0s)
[2025-11-25 10:19:13] 2025-11-25 09:18:40,037 | INFO     | monitor loop #1582: job 0:6895358618 is in state 'finished'
[2025-11-25 10:19:13] 2025-11-25 09:18:40,038 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 10:19:13] 2025-11-25 09:18:40,091 | INFO     | time since job start (20897s) is within the limit (172800.0s)
[2025-11-25 10:19:13] 2025-11-25 09:18:40,760 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-25 10:19:13] 2025-11-25 09:18:40,764 | INFO     | found 24 cores (24 cores per socket, 1 socket) , CPU MHz: 2227.59840625
[2025-11-25 10:19:13] 2025-11-25 09:18:40,768 | INFO     | using path: /var/lib/boinc/slots/22/PanDA_Pilot-6895358618/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 10:19:13] 2025-11-25 09:18:40,768 | INFO     | extracted standard info from prmon json
[2025-11-25 10:19:13] 2025-11-25 09:18:40,769 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 10:19:13] 2025-11-25 09:18:40,769 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 10:19:13] 2025-11-25 09:18:40,773 | INFO     | fitting pss+swap vs Time
[2025-11-25 10:19:13] 2025-11-25 09:18:40,773 | INFO     | sum of square deviations: 12403750705.5
[2025-11-25 10:19:13] 2025-11-25 09:18:40,776 | INFO     | sum of deviations: 239267697927.50003
[2025-11-25 10:19:13] 2025-11-25 09:18:40,776 | INFO     | mean x: 1764051848.5
[2025-11-25 10:19:13] 2025-11-25 09:18:40,776 | INFO     | mean y: 3443820.692982456
[2025-11-25 10:19:13] 2025-11-25 09:18:40,776 | INFO     | intersect: -34025023441.889896
[2025-11-25 10:19:13] 2025-11-25 09:18:40,776 | INFO     | chi2: 7.084139507385016
[2025-11-25 10:19:13] 2025-11-25 09:18:40,777 | INFO     | sum of square deviations: 11867638328.0
[2025-11-25 10:19:13] 2025-11-25 09:18:40,779 | INFO     | sum of deviations: 368942587235.0
[2025-11-25 10:19:13] 2025-11-25 09:18:40,779 | INFO     | mean x: 1764051696.0
[2025-11-25 10:19:13] 2025-11-25 09:18:40,779 | INFO     | mean y: 3480687.643916914
[2025-11-25 10:19:13] 2025-11-25 09:18:40,779 | INFO     | intersect: -54837573509.54881
[2025-11-25 10:19:13] 2025-11-25 09:18:40,779 | INFO     | chi2: 4.186604587267021
[2025-11-25 10:19:13] 2025-11-25 09:18:40,779 | INFO     | current chi2=4.186604587267021 (change=40.901720203242704 %)
[2025-11-25 10:19:13] 2025-11-25 09:18:40,780 | INFO     | sum of square deviations: 11347200663.0
[2025-11-25 10:19:13] 2025-11-25 09:18:40,782 | INFO     | sum of deviations: 417777748336.5
[2025-11-25 10:19:13] 2025-11-25 09:18:40,782 | INFO     | mean x: 1764051543.5
[2025-11-25 10:19:13] 2025-11-25 09:18:40,782 | INFO     | mean y: 3494945.231927711
[2025-11-25 10:19:13] 2025-11-25 09:18:40,782 | INFO     | intersect: -64944812895.66533
[2025-11-25 10:19:13] 2025-11-25 09:18:40,782 | INFO     | chi2: 3.5874319048705465
[2025-11-25 10:19:13] 2025-11-25 09:18:40,782 | INFO     | current chi2=3.5874319048705465 (change=14.311661631929013 %)
[2025-11-25 10:19:13] 2025-11-25 09:18:40,782 | INFO     | right removable region: 331
[2025-11-25 10:19:13] 2025-11-25 09:18:40,783 | INFO     | sum of square deviations: 11867638328.0
[2025-11-25 10:19:13] 2025-11-25 09:18:40,785 | INFO     | sum of deviations: 98977043280.0
[2025-11-25 10:19:13] 2025-11-25 09:18:40,785 | INFO     | mean x: 1764052001.0
[2025-11-25 10:19:13] 2025-11-25 09:18:40,785 | INFO     | mean y: 3483688.3204747774
[2025-11-25 10:19:13] 2025-11-25 09:18:40,785 | INFO     | intersect: -14708849669.463295
[2025-11-25 10:19:13] 2025-11-25 09:18:40,785 | INFO     | chi2: 4.026089745521428
[2025-11-25 10:19:13] 2025-11-25 09:18:40,785 | INFO     | current chi2=4.026089745521428 (change=43.167554205781194 %)
[2025-11-25 10:19:13] 2025-11-25 09:18:40,786 | INFO     | sum of square deviations: 11347200663.0
[2025-11-25 10:19:13] 2025-11-25 09:18:40,788 | INFO     | sum of deviations: 52691091118.99999
[2025-11-25 10:19:13] 2025-11-25 09:18:40,788 | INFO     | mean x: 1764052153.5
[2025-11-25 10:19:13] 2025-11-25 09:18:40,788 | INFO     | mean y: 3497188.8433734938
[2025-11-25 10:19:13] 2025-11-25 09:18:40,788 | INFO     | intersect: -8187935704.541484
[2025-11-25 10:19:13] 2025-11-25 09:18:40,788 | INFO     | chi2: 3.606527186458482
[2025-11-25 10:19:13] 2025-11-25 09:18:40,789 | INFO     | current chi2=3.606527186458482 (change=10.421093060075542 %)
[2025-11-25 10:19:13] 2025-11-25 09:18:40,789 | INFO     | left removable region: 20
[2025-11-25 10:19:13] 2025-11-25 09:18:40,789 | INFO     | sum of square deviations: 9327281860.0
[2025-11-25 10:19:13] 2025-11-25 09:18:40,791 | INFO     | sum of deviations: 200519554837.0
[2025-11-25 10:19:13] 2025-11-25 09:18:40,791 | INFO     | mean x: 1764052123.0
[2025-11-25 10:19:13] 2025-11-25 09:18:40,791 | INFO     | mean y: 3560560.8681672025
[2025-11-25 10:19:13] 2025-11-25 09:18:40,791 | INFO     | intersect: -37920343929.48298
[2025-11-25 10:19:13] 2025-11-25 09:18:40,791 | INFO     | chi2: 0.030127110183373277
[2025-11-25 10:19:13] 2025-11-25 09:18:40,791 | INFO     | current memory leak: 21.50 B/s (using 311 data points, chi2=0.03)
[2025-11-25 10:19:13] 2025-11-25 09:18:40,792 | INFO     | could have reported an average CPU frequency of 2346 MHz (15 samples)
[2025-11-25 10:19:13] 2025-11-25 09:18:40,792 | INFO     | ..............................
[2025-11-25 10:19:13] 2025-11-25 09:18:40,792 | INFO     | . Timing measurements:
[2025-11-25 10:19:13] 2025-11-25 09:18:40,792 | INFO     | . get job = 0 s
[2025-11-25 10:19:13] 2025-11-25 09:18:40,792 | INFO     | . initial setup = 6 s
[2025-11-25 10:19:13] 2025-11-25 09:18:40,792 | INFO     | . payload setup = 6 s
[2025-11-25 10:19:13] 2025-11-25 09:18:40,792 | INFO     | . stage-in = 0 s
[2025-11-25 10:19:13] 2025-11-25 09:18:40,792 | INFO     | . payload execution = 20863 s
[2025-11-25 10:19:13] 2025-11-25 09:18:40,792 | INFO     | . stage-out = 4 s
[2025-11-25 10:19:13] 2025-11-25 09:18:40,792 | INFO     | . log creation = 0 s
[2025-11-25 10:19:13] 2025-11-25 09:18:40,793 | INFO     | ..............................
[2025-11-25 10:19:13] 2025-11-25 09:18:40,854 | INFO     | 
[2025-11-25 10:19:13] 2025-11-25 09:18:40,855 | INFO     | job summary report
[2025-11-25 10:19:13] 2025-11-25 09:18:40,855 | INFO     | --------------------------------------------------
[2025-11-25 10:19:13] 2025-11-25 09:18:40,855 | INFO     | PanDA job id: 6895358618
[2025-11-25 10:19:13] 2025-11-25 09:18:40,855 | INFO     | task id: 47556149
[2025-11-25 10:19:13] 2025-11-25 09:18:40,855 | INFO     | errors: (none)
[2025-11-25 10:19:13] 2025-11-25 09:18:40,855 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 10:19:13] 2025-11-25 09:18:40,855 | INFO     | pilot state: finished 
[2025-11-25 10:19:13] 2025-11-25 09:18:40,855 | INFO     | transexitcode: 0
[2025-11-25 10:19:13] 2025-11-25 09:18:40,855 | INFO     | exeerrorcode: 0
[2025-11-25 10:19:13] 2025-11-25 09:18:40,855 | INFO     | exeerrordiag: 
[2025-11-25 10:19:13] 2025-11-25 09:18:40,855 | INFO     | exitcode: 0
[2025-11-25 10:19:13] 2025-11-25 09:18:40,855 | INFO     | exitmsg: OK
[2025-11-25 10:19:13] 2025-11-25 09:18:40,855 | INFO     | cpuconsumptiontime: 240544 s
[2025-11-25 10:19:13] 2025-11-25 09:18:40,856 | INFO     | nevents: 1000
[2025-11-25 10:19:13] 2025-11-25 09:18:40,856 | INFO     | neventsw: 0
[2025-11-25 10:19:13] 2025-11-25 09:18:40,856 | INFO     | pid: 36340
[2025-11-25 10:19:13] 2025-11-25 09:18:40,856 | INFO     | pgrp: 36340
[2025-11-25 10:19:13] 2025-11-25 09:18:40,856 | INFO     | corecount: 12
[2025-11-25 10:19:13] 2025-11-25 09:18:40,856 | INFO     | event service: False
[2025-11-25 10:19:13] 2025-11-25 09:18:40,856 | INFO     | sizes: {0: 2284209, 3: 2284471, 11: 2284499, 20873: 2319141, 20877: 2328142, 20878: 2328198, 20882: 2328572}
[2025-11-25 10:19:13] 2025-11-25 09:18:40,856 | INFO     | --------------------------------------------------
[2025-11-25 10:19:13] 2025-11-25 09:18:40,856 | INFO     | 
[2025-11-25 10:19:13] 2025-11-25 09:18:40,856 | INFO     | executing command: ls -lF /var/lib/boinc/slots/22
[2025-11-25 10:19:13] 2025-11-25 09:18:40,876 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 10:19:13] 2025-11-25 09:18:40,877 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 10:19:13] 2025-11-25 09:18:40,877 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 10:19:13] 2025-11-25 09:18:40,877 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 10:19:13] 2025-11-25 09:18:40,877 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 10:19:13] 2025-11-25 09:18:40,877 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 10:19:13] 2025-11-25 09:18:40,877 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 10:19:13] 2025-11-25 09:18:40,877 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 10:19:13] 2025-11-25 09:18:40,877 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 10:19:13] 2025-11-25 09:18:40,877 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 10:19:13] 2025-11-25 09:18:40,877 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 10:19:13] 2025-11-25 09:18:40,877 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 10:19:13] 2025-11-25 09:18:40,878 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 10:19:13] 2025-11-25 09:18:40,878 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 10:19:13] 2025-11-25 09:18:40,878 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 10:19:13] 2025-11-25 09:18:40,878 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 10:19:13] 2025-11-25 09:18:40,878 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 10:19:13] 2025-11-25 09:18:40,878 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 10:19:13] 2025-11-25 09:18:40,878 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 10:19:13] 2025-11-25 09:18:40,878 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 10:19:13] 2025-11-25 09:18:40,878 | INFO     | job 6895358618 has completed (purged errors)
[2025-11-25 10:19:13] 2025-11-25 09:18:40,878 | INFO     | overall cleanup function is called
[2025-11-25 10:19:13] 2025-11-25 09:18:41,893 | INFO     | --- collectZombieJob: --- 10, [36340]
[2025-11-25 10:19:13] 2025-11-25 09:18:41,893 | INFO     | zombie collector waiting for pid 36340
[2025-11-25 10:19:13] 2025-11-25 09:18:41,893 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 10:19:13] 2025-11-25 09:18:41,893 | INFO     | collected zombie processes
[2025-11-25 10:19:13] 2025-11-25 09:18:41,893 | INFO     | will attempt to kill all subprocesses of pid=36340
[2025-11-25 10:19:13] 2025-11-25 09:18:42,014 | INFO     | process IDs to be killed: [36340] (in reverse order)
[2025-11-25 10:19:13] 2025-11-25 09:18:42,061 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 10:19:13] 2025-11-25 09:18:42,061 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 10:19:13] 2025-11-25 09:18:42,066 | INFO     | did not find any defunct processes belonging to 36340
[2025-11-25 10:19:13] 2025-11-25 09:18:42,070 | INFO     | did not find any defunct processes belonging to 36340
[2025-11-25 10:19:13] 2025-11-25 09:18:42,071 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 10:19:13] 2025-11-25 09:18:42,071 | INFO     | ready for new job
[2025-11-25 10:19:13] 2025-11-25 09:18:42,071 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 10:19:13] 2025-11-25 09:18:42,073 | INFO     | ***************************************
[2025-11-25 10:19:13] 2025-11-25 09:18:42,073 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 10:19:13] 2025-11-25 09:18:42,073 | INFO     | ***************************************
[2025-11-25 10:19:13] 2025-11-25 09:18:42,073 | INFO     | 
[2025-11-25 10:19:13] 2025-11-25 09:18:42,075 | INFO     | architecture information:
[2025-11-25 10:19:13] 2025-11-25 09:18:42,075 | INFO     | executing command: cat /etc/os-release
[2025-11-25 10:19:13] 2025-11-25 09:18:42,088 | INFO     | cat /etc/os-release:
[2025-11-25 10:19:13] NAME="CentOS Linux"
[2025-11-25 10:19:13] VERSION="7 (Core)"
[2025-11-25 10:19:13] ID="centos"
[2025-11-25 10:19:13] ID_LIKE="rhel fedora"
[2025-11-25 10:19:13] VERSION_ID="7"
[2025-11-25 10:19:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 10:19:13] ANSI_COLOR="0;31"
[2025-11-25 10:19:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 10:19:13] HOME_URL="https://www.centos.org/"
[2025-11-25 10:19:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 10:19:13] 
[2025-11-25 10:19:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 10:19:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 10:19:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 10:19:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 10:19:13] 
[2025-11-25 10:19:13] 2025-11-25 09:18:42,089 | INFO     | ***************************************
[2025-11-25 10:19:13] 2025-11-25 09:18:42,591 | INFO     | executing command: df -mP /var/lib/boinc/slots/22
[2025-11-25 10:19:13] 2025-11-25 09:18:42,607 | INFO     | sufficient remaining disk space (385806761984 B)
[2025-11-25 10:19:13] 2025-11-25 09:18:42,608 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 10:19:13] 2025-11-25 09:18:42,608 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 10:19:13] 2025-11-25 09:18:42,608 | INFO     | update_server=False
[2025-11-25 10:19:13] 2025-11-25 09:18:42,608 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 10:19:13] 2025-11-25 09:18:42,608 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 10:19:13] 2025-11-25 09:18:42,608 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 10:19:13] 2025-11-25 09:18:43,546 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 10:19:13] 2025-11-25 09:18:43,546 | INFO     | aborting loop
[2025-11-25 10:19:13] 2025-11-25 09:18:43,613 | INFO     | [job] queue monitor thread has finished
[2025-11-25 10:19:13] 2025-11-25 09:18:43,613 | INFO     | [job] retrieve thread has finished
[2025-11-25 10:19:13] 2025-11-25 09:18:43,624 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 10:19:13] 2025-11-25 09:18:43,659 | INFO     | all data control threads have been joined
[2025-11-25 10:19:13] 2025-11-25 09:18:43,752 | INFO     | all job control threads have been joined
[2025-11-25 10:19:13] 2025-11-25 09:18:43,821 | INFO     | [payload] validate_post thread has finished
[2025-11-25 10:19:13] 2025-11-25 09:18:43,860 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 10:19:13] 2025-11-25 09:18:43,920 | INFO     | all payload control threads have been joined
[2025-11-25 10:19:13] 2025-11-25 09:18:43,963 | INFO     | [job] validate thread has finished
[2025-11-25 10:19:13] 2025-11-25 09:18:44,187 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 10:19:13] 2025-11-25 09:18:44,320 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 10:19:13] 2025-11-25 09:18:44,551 | INFO     | [job] job monitor thread has finished
[2025-11-25 10:19:13] 2025-11-25 09:18:44,561 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 10:19:13] 2025-11-25 09:18:44,664 | INFO     | [data] control thread has finished
[2025-11-25 10:19:13] 2025-11-25 09:18:44,709 | INFO     | [data] copytool_in thread has finished
[2025-11-25 10:19:13] 2025-11-25 09:18:44,757 | INFO     | [job] control thread has finished
[2025-11-25 10:19:13] 2025-11-25 09:18:44,925 | INFO     | [payload] control thread has finished
[2025-11-25 10:19:13] 2025-11-25 09:18:45,009 | INFO     | [payload] failed_post thread has finished
[2025-11-25 10:19:13] 2025-11-25 09:18:45,865 | INFO     | [data] copytool_out thread has finished
[2025-11-25 10:19:13] 2025-11-25 09:18:46,614 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 10:19:13] 2025-11-25 09:18:58,027 | INFO     | [monitor] cgroup control has ended
[2025-11-25 10:19:13] 2025-11-25 09:18:59,317 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 132093154514752)>', '<ExcThread(monitor, started 132092314773248)>']
[2025-11-25 10:19:13] 2025-11-25 09:19:04,342 | INFO     | all workflow threads have been joined
[2025-11-25 10:19:13] 2025-11-25 09:19:04,342 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 10:19:13] 2025-11-25 09:19:04,342 | INFO     | traces error code: 0
[2025-11-25 10:19:13] 2025-11-25 09:19:04,342 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 10:19:13] 2025-11-25 09:19:13,300 | INFO     | PID=29683 has CPU usage=5.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-25 10:19:13] 2025-11-25 09:19:13,301 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 10:19:13] 2025-11-25 09:19:13,301 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 10:19:13] 2025-11-25 09:19:13,301 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 10:19:13] 2025-11-25 09:19:13,301 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 10:19:13] 2025-11-25 09:19:13,301 | INFO     | [monitor] control thread has ended
[2025-11-25 10:19:13] 2025-11-25 09:19:13,413 [wrapper] ==== pilot stdout END ====
[2025-11-25 10:19:13] 2025-11-25 09:19:13,415 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 10:19:13] 2025-11-25 09:19:13,417 [wrapper] pilotpid: 29683
[2025-11-25 10:19:13] 2025-11-25 09:19:13,419 [wrapper] Pilot exit status: 0
[2025-11-25 10:19:13] 2025-11-25 09:19:13,428 [wrapper] pandaids: 6895358618
[2025-11-25 10:19:13] 2025-11-25 09:19:13,456 [wrapper] cleanup supervisor_pilot   78542 29684
[2025-11-25 10:19:13] 2025-11-25 09:19:13,459 [wrapper] Test setup, not cleaning
[2025-11-25 10:19:13] 2025-11-25 09:19:13,461 [wrapper] apfmon messages muted
[2025-11-25 10:19:13] 2025-11-25 09:19:13,464 [wrapper] ==== wrapper stdout END ====
[2025-11-25 10:19:13] 2025-11-25 09:19:13,467 [wrapper] ==== wrapper stderr END ====
[2025-11-25 10:19:13]  *** Error codes and diagnostics ***
[2025-11-25 10:19:13]     "exeErrorCode": 0,
[2025-11-25 10:19:13]     "exeErrorDiag": "",
[2025-11-25 10:19:13]     "pilotErrorCode": 0,
[2025-11-25 10:19:13]     "pilotErrorDiag": "",
[2025-11-25 10:19:13]  *** Listing of results directory ***
[2025-11-25 10:19:13] total 1308212
[2025-11-25 10:19:13] -rw-r--r-- 1 boinc boinc    576529 nov.  23 13:50 pilot3.tar.gz
[2025-11-25 10:19:13] -rw-r--r-- 1 boinc boinc      5112 nov.  23 13:58 queuedata.json
[2025-11-25 10:19:13] -rwx------ 1 boinc boinc     36292 nov.  23 13:59 runpilot2-wrapper.sh
[2025-11-25 10:19:13] -rw-r--r-- 1 boinc boinc       100 nov.  25 04:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 10:19:13] -rwxr-xr-x 1 boinc boinc      7986 nov.  25 04:29 run_atlas
[2025-11-25 10:19:13] -rw-r--r-- 1 boinc boinc       105 nov.  25 04:29 job.xml
[2025-11-25 10:19:13] -rw-r--r-- 2 boinc boinc 408134768 nov.  25 04:29 EVNT.47483658._001162.pool.root.1
[2025-11-25 10:19:13] drwxrwx--x 2 boinc boinc      4096 nov.  25 04:29 shared
[2025-11-25 10:19:13] -rw-r--r-- 2 boinc boinc    590105 nov.  25 04:29 input.tar.gz
[2025-11-25 10:19:13] -rw-r--r-- 2 boinc boinc     15847 nov.  25 04:29 start_atlas.sh
[2025-11-25 10:19:13] -rw-r--r-- 1 boinc boinc         0 nov.  25 04:29 boinc_setup_complete
[2025-11-25 10:19:13] -rw-r--r-- 1 boinc boinc      9454 nov.  25 04:29 init_data.xml
[2025-11-25 10:19:13] -rw-r--r-- 1 boinc boinc         0 nov.  25 04:29 boinc_lockfile
[2025-11-25 10:19:13] -rw-r--r-- 1 boinc boinc      2784 nov.  25 04:29 pandaJob.out
[2025-11-25 10:19:13] -rw------- 1 boinc boinc    991801 nov.  25 04:30 agis_schedconf.cvmfs.json
[2025-11-25 10:19:13] drwx------ 5 boinc boinc      4096 nov.  25 04:30 pilot3
[2025-11-25 10:19:13] -rw-r--r-- 1 boinc boinc       533 nov.  25 10:08 boinc_task_state.xml
[2025-11-25 10:19:13] -rw------- 1 boinc boinc 917438995 nov.  25 10:17 HITS.47556149._001489.pool.root.1
[2025-11-25 10:19:13] -rw------- 1 boinc boinc      1029 nov.  25 10:18 memory_monitor_summary.json
[2025-11-25 10:19:13] -rw------- 1 boinc boinc   1516240 nov.  25 10:18 agis_ddmendpoints.agis.ALL.json
[2025-11-25 10:19:13] -rw------- 1 boinc boinc   2102455 nov.  25 10:18 log.47556149._001489.job.log.tgz.1
[2025-11-25 10:19:13] -rw------- 1 boinc boinc      8612 nov.  25 10:18 heartbeat.json
[2025-11-25 10:19:13] -rw-r--r-- 1 boinc boinc      8192 nov.  25 10:18 boinc_mmap_file
[2025-11-25 10:19:13] -rw-r--r-- 1 boinc boinc        29 nov.  25 10:18 wrapper_checkpoint.txt
[2025-11-25 10:19:13] -rw------- 1 boinc boinc       745 nov.  25 10:19 pilotlog.txt
[2025-11-25 10:19:13] -rw------- 1 boinc boinc        95 nov.  25 10:19 pilot_heartbeat.json
[2025-11-25 10:19:13] -rw------- 1 boinc boinc   2952425 nov.  25 10:19 log.47556149._001489.job.log.1
[2025-11-25 10:19:13] -rw------- 1 boinc boinc       353 nov.  25 10:19 output.list
[2025-11-25 10:19:13] -rw-r--r-- 1 boinc boinc       620 nov.  25 10:19 runtime_log
[2025-11-25 10:19:13] -rw------- 1 boinc boinc   5079040 nov.  25 10:19 result.tar.gz
[2025-11-25 10:19:13] -rw-r--r-- 1 boinc boinc      8894 nov.  25 10:19 runtime_log.err
[2025-11-25 10:19:13] -rw------- 1 boinc boinc       672 nov.  25 10:19 jTCLDmrrOh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmWuKKDmoV6DTo.diag
[2025-11-25 10:19:13] -rw-r--r-- 1 boinc boinc     21438 nov.  25 10:19 stderr.txt
[2025-11-25 10:19:13] HITS file was successfully produced:
[2025-11-25 10:19:13] -rw------- 1 boinc boinc 917438995 nov.  25 10:17 shared/HITS.pool.root.1
[2025-11-25 10:19:13]  *** Contents of shared directory: ***
[2025-11-25 10:19:13] total 1300076
[2025-11-25 10:19:13] -rw-r--r-- 2 boinc boinc 408134768 nov.  25 04:29 ATLAS.root_0
[2025-11-25 10:19:13] -rw-r--r-- 2 boinc boinc    590105 nov.  25 04:29 input.tar.gz
[2025-11-25 10:19:13] -rw-r--r-- 2 boinc boinc     15847 nov.  25 04:29 start_atlas.sh
[2025-11-25 10:19:13] -rw------- 1 boinc boinc 917438995 nov.  25 10:17 HITS.pool.root.1
[2025-11-25 10:19:13] -rw------- 1 boinc boinc   5079040 nov.  25 10:19 result.tar.gz
10:19:15 (25256): run_atlas exited; CPU time 240452.645806
10:19:15 (25256): called boinc_finish(0)

</stderr_txt>
]]>

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