Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
09:52:03 (2913467): wrapper (7.7.26015): starting
09:52:03 (2913467): wrapper: running run_atlas (--nthreads 4)
[2025-11-24 09:52:03] Arguments: --nthreads 4
[2025-11-24 09:52:03] Threads: 4
[2025-11-24 09:52:03] Checking for CVMFS
[2025-11-24 09:52:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 09:52:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 09:52:03] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 09:52:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 09:52:04] 2.13.2.0 2433702 696 53312 153239 0 81 2574902 4096001 0 130560 0 352278 99.965 26551 698 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-11-24 09:52:04] CVMFS is ok
[2025-11-24 09:52:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 09:52:04] Small home clusters do not require a local http proxy but it is suggested if
[2025-11-24 09:52:04] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-11-24 09:52:04] Further information can be found at the LHC@home message board.
[2025-11-24 09:52:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 09:52:04] Checking for apptainer binary...
[2025-11-24 09:52:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 09:52:04] Running /usr/bin/apptainer --version
[2025-11-24 09:52:04] apptainer version 1.4.2
[2025-11-24 09:52:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 09:52:04] Obake-chan
[2025-11-24 09:52:04] apptainer works
[2025-11-24 09:52:04] Set ATHENA_PROC_NUMBER=4
[2025-11-24 09:52:04] Set ATHENA_CORE_NUMBER=4
[2025-11-24 09:52:04] Starting ATLAS job with PandaID=6895358852
[2025-11-24 09:52:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 21:28:19]  *** The last 200 lines of the pilot log: ***
[2025-11-24 21:28:19] 2025-11-24 20:27:19,416 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-11-24 21:28:19] 2025-11-24 20:27:20,680 | INFO     | time since job start (41707s) is within the limit (172800.0s)
[2025-11-24 21:28:19] 2025-11-24 20:27:21,331 | INFO     | monitor loop #3114: job 0:6895358852 is in state 'finished'
[2025-11-24 21:28:19] 2025-11-24 20:27:21,331 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 21:28:19] 2025-11-24 20:27:22,395 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-24 21:28:19] 2025-11-24 20:27:22,398 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 2199.26675
[2025-11-24 21:28:19] 2025-11-24 20:27:22,402 | INFO     | using path: /var/lib/boinc-client/slots/3/PanDA_Pilot-6895358852/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 21:28:19] 2025-11-24 20:27:22,402 | INFO     | extracted standard info from prmon json
[2025-11-24 21:28:19] 2025-11-24 20:27:22,402 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 21:28:19] 2025-11-24 20:27:22,402 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 21:28:19] 2025-11-24 20:27:22,413 | INFO     | fitting pss+swap vs Time
[2025-11-24 21:28:19] 2025-11-24 20:27:22,414 | INFO     | sum of square deviations: 99230641935.0
[2025-11-24 21:28:19] 2025-11-24 20:27:22,425 | INFO     | sum of deviations: 328198553881.9999
[2025-11-24 21:28:19] 2025-11-24 20:27:22,425 | INFO     | mean x: 1763995187.5
[2025-11-24 21:28:19] 2025-11-24 20:27:22,426 | INFO     | mean y: 2299431.169590643
[2025-11-24 21:28:19] 2025-11-24 20:27:22,426 | INFO     | intersect: -5831993870.808001
[2025-11-24 21:28:19] 2025-11-24 20:27:22,426 | INFO     | chi2: 3.992571889082819
[2025-11-24 21:28:19] 2025-11-24 20:27:22,427 | INFO     | sum of square deviations: 97070396780.0
[2025-11-24 21:28:19] 2025-11-24 20:27:22,438 | INFO     | sum of deviations: 450900493204.0
[2025-11-24 21:28:19] 2025-11-24 20:27:22,438 | INFO     | mean x: 1763995035.0
[2025-11-24 21:28:19] 2025-11-24 20:27:22,438 | INFO     | mean y: 2308074.7776141386
[2025-11-24 21:28:19] 2025-11-24 20:27:22,438 | INFO     | intersect: -8191603330.504552
[2025-11-24 21:28:19] 2025-11-24 20:27:22,439 | INFO     | chi2: 2.2002213155076915
[2025-11-24 21:28:19] 2025-11-24 20:27:22,439 | INFO     | current chi2=2.2002213155076915 (change=44.89213027011692 %)
[2025-11-24 21:28:19] 2025-11-24 20:27:22,440 | INFO     | sum of square deviations: 94941733612.5
[2025-11-24 21:28:19] 2025-11-24 20:27:22,449 | INFO     | sum of deviations: 445358301512.5
[2025-11-24 21:28:19] 2025-11-24 20:27:22,449 | INFO     | mean x: 1763994882.5
[2025-11-24 21:28:19] 2025-11-24 20:27:22,449 | INFO     | mean y: 2307677.683976261
[2025-11-24 21:28:19] 2025-11-24 20:27:22,449 | INFO     | intersect: -8272343888.647954
[2025-11-24 21:28:19] 2025-11-24 20:27:22,450 | INFO     | chi2: 2.199588793930524
[2025-11-24 21:28:19] 2025-11-24 20:27:22,450 | INFO     | current chi2=2.199588793930524 (change=0.028748088781318456 %)
[2025-11-24 21:28:19] 2025-11-24 20:27:22,450 | INFO     | right removable region: 673
[2025-11-24 21:28:19] 2025-11-24 20:27:22,451 | INFO     | sum of square deviations: 97070396780.0
[2025-11-24 21:28:19] 2025-11-24 20:27:22,457 | INFO     | sum of deviations: 178934278385.99994
[2025-11-24 21:28:19] 2025-11-24 20:27:22,457 | INFO     | mean x: 1763995340.0
[2025-11-24 21:28:19] 2025-11-24 20:27:22,457 | INFO     | mean y: 2309955.6951399115
[2025-11-24 21:28:19] 2025-11-24 20:27:22,457 | INFO     | intersect: -3249342903.5646224
[2025-11-24 21:28:19] 2025-11-24 20:27:22,458 | INFO     | chi2: 1.893851502997813
[2025-11-24 21:28:19] 2025-11-24 20:27:22,458 | INFO     | current chi2=1.893851502997813 (change=52.56562547624228 %)
[2025-11-24 21:28:19] 2025-11-24 20:27:22,459 | INFO     | sum of square deviations: 94941733612.5
[2025-11-24 21:28:19] 2025-11-24 20:27:22,465 | INFO     | sum of deviations: 168976234718.49994
[2025-11-24 21:28:19] 2025-11-24 20:27:22,465 | INFO     | mean x: 1763995492.5
[2025-11-24 21:28:19] 2025-11-24 20:27:22,465 | INFO     | mean y: 2310667.461424332
[2025-11-24 21:28:19] 2025-11-24 20:27:22,465 | INFO     | intersect: -3137228764.161211
[2025-11-24 21:28:19] 2025-11-24 20:27:22,466 | INFO     | chi2: 1.8889505810322684
[2025-11-24 21:28:19] 2025-11-24 20:27:22,466 | INFO     | current chi2=1.8889505810322684 (change=0.25878068886534766 %)
[2025-11-24 21:28:19] 2025-11-24 20:27:22,466 | INFO     | left removable region: 20
[2025-11-24 21:28:19] 2025-11-24 20:27:22,467 | INFO     | sum of square deviations: 86340975142.0
[2025-11-24 21:28:19] 2025-11-24 20:27:22,473 | INFO     | sum of deviations: 286431141524.0
[2025-11-24 21:28:19] 2025-11-24 20:27:22,473 | INFO     | mean x: 1763995462.0
[2025-11-24 21:28:19] 2025-11-24 20:27:22,473 | INFO     | mean y: 2319088.75957121
[2025-11-24 21:28:19] 2025-11-24 20:27:22,473 | INFO     | intersect: -5849632814.642476
[2025-11-24 21:28:19] 2025-11-24 20:27:22,473 | INFO     | chi2: 0.07224925161873101
[2025-11-24 21:28:19] 2025-11-24 20:27:22,474 | INFO     | current memory leak: 3.32 B/s (using 653 data points, chi2=0.07)
[2025-11-24 21:28:19] 2025-11-24 20:27:22,474 | INFO     | could have reported an average CPU frequency of 2199 MHz (27 samples)
[2025-11-24 21:28:19] 2025-11-24 20:27:22,474 | INFO     | ..............................
[2025-11-24 21:28:19] 2025-11-24 20:27:22,474 | INFO     | . Timing measurements:
[2025-11-24 21:28:19] 2025-11-24 20:27:22,474 | INFO     | . get job = 0 s
[2025-11-24 21:28:19] 2025-11-24 20:27:22,474 | INFO     | . initial setup = 1 s
[2025-11-24 21:28:19] 2025-11-24 20:27:22,474 | INFO     | . payload setup = 4 s
[2025-11-24 21:28:19] 2025-11-24 20:27:22,474 | INFO     | . stage-in = 0 s
[2025-11-24 21:28:19] 2025-11-24 20:27:22,474 | INFO     | . payload execution = 41677 s
[2025-11-24 21:28:19] 2025-11-24 20:27:22,474 | INFO     | . stage-out = 2 s
[2025-11-24 21:28:19] 2025-11-24 20:27:22,474 | INFO     | . log creation = 0 s
[2025-11-24 21:28:19] 2025-11-24 20:27:22,474 | INFO     | ..............................
[2025-11-24 21:28:19] 2025-11-24 20:27:22,531 | INFO     | 
[2025-11-24 21:28:19] 2025-11-24 20:27:22,531 | INFO     | job summary report
[2025-11-24 21:28:19] 2025-11-24 20:27:22,531 | INFO     | --------------------------------------------------
[2025-11-24 21:28:19] 2025-11-24 20:27:22,531 | INFO     | PanDA job id: 6895358852
[2025-11-24 21:28:19] 2025-11-24 20:27:22,531 | INFO     | task id: 47556137
[2025-11-24 21:28:19] 2025-11-24 20:27:22,531 | INFO     | errors: (none)
[2025-11-24 21:28:19] 2025-11-24 20:27:22,531 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 21:28:19] 2025-11-24 20:27:22,531 | INFO     | pilot state: finished 
[2025-11-24 21:28:19] 2025-11-24 20:27:22,531 | INFO     | transexitcode: 0
[2025-11-24 21:28:19] 2025-11-24 20:27:22,531 | INFO     | exeerrorcode: 0
[2025-11-24 21:28:19] 2025-11-24 20:27:22,531 | INFO     | exeerrordiag: 
[2025-11-24 21:28:19] 2025-11-24 20:27:22,531 | INFO     | exitcode: 0
[2025-11-24 21:28:19] 2025-11-24 20:27:22,531 | INFO     | exitmsg: OK
[2025-11-24 21:28:19] 2025-11-24 20:27:22,531 | INFO     | cpuconsumptiontime: 165683 s
[2025-11-24 21:28:19] 2025-11-24 20:27:22,531 | INFO     | nevents: 1000
[2025-11-24 21:28:19] 2025-11-24 20:27:22,532 | INFO     | neventsw: 0
[2025-11-24 21:28:19] 2025-11-24 20:27:22,532 | INFO     | pid: 2924006
[2025-11-24 21:28:19] 2025-11-24 20:27:22,532 | INFO     | pgrp: 2924006
[2025-11-24 21:28:19] 2025-11-24 20:27:22,532 | INFO     | corecount: 4
[2025-11-24 21:28:19] 2025-11-24 20:27:22,532 | INFO     | event service: False
[2025-11-24 21:28:19] 2025-11-24 20:27:22,532 | INFO     | sizes: {0: 2298813, 3: 2299075, 11: 2299103, 41685: 2344129, 41686: 2344128, 41689: 2353983, 41690: 2354167, 41695: 2354413}
[2025-11-24 21:28:19] 2025-11-24 20:27:22,532 | INFO     | --------------------------------------------------
[2025-11-24 21:28:19] 2025-11-24 20:27:22,532 | INFO     | 
[2025-11-24 21:28:19] 2025-11-24 20:27:22,532 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/3
[2025-11-24 21:28:19] 2025-11-24 20:27:22,549 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 21:28:19] 2025-11-24 20:27:22,550 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 21:28:19] 2025-11-24 20:27:22,550 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 21:28:19] 2025-11-24 20:27:22,550 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 21:28:19] 2025-11-24 20:27:22,550 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 21:28:19] 2025-11-24 20:27:22,550 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 21:28:19] 2025-11-24 20:27:22,550 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 21:28:19] 2025-11-24 20:27:22,550 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 21:28:19] 2025-11-24 20:27:22,550 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 21:28:19] 2025-11-24 20:27:22,550 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 21:28:19] 2025-11-24 20:27:22,550 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 21:28:19] 2025-11-24 20:27:22,550 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 21:28:19] 2025-11-24 20:27:22,550 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 21:28:19] 2025-11-24 20:27:22,550 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 21:28:19] 2025-11-24 20:27:22,551 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 21:28:19] 2025-11-24 20:27:22,551 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 21:28:19] 2025-11-24 20:27:22,551 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 21:28:19] 2025-11-24 20:27:22,551 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 21:28:19] 2025-11-24 20:27:22,551 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 21:28:19] 2025-11-24 20:27:22,551 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 21:28:19] 2025-11-24 20:27:22,551 | INFO     | job 6895358852 has completed (purged errors)
[2025-11-24 21:28:19] 2025-11-24 20:27:22,551 | INFO     | overall cleanup function is called
[2025-11-24 21:28:19] 2025-11-24 20:27:23,566 | INFO     | --- collectZombieJob: --- 10, [2924006]
[2025-11-24 21:28:19] 2025-11-24 20:27:23,566 | INFO     | zombie collector waiting for pid 2924006
[2025-11-24 21:28:19] 2025-11-24 20:27:23,567 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 21:28:19] 2025-11-24 20:27:23,567 | INFO     | collected zombie processes
[2025-11-24 21:28:19] 2025-11-24 20:27:23,567 | INFO     | will attempt to kill all subprocesses of pid=2924006
[2025-11-24 21:28:19] 2025-11-24 20:27:23,691 | INFO     | process IDs to be killed: [2924006] (in reverse order)
[2025-11-24 21:28:19] 2025-11-24 20:27:23,735 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 21:28:19] 2025-11-24 20:27:23,736 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 21:28:19] 2025-11-24 20:27:23,739 | INFO     | did not find any defunct processes belonging to 2924006
[2025-11-24 21:28:19] 2025-11-24 20:27:23,742 | INFO     | did not find any defunct processes belonging to 2924006
[2025-11-24 21:28:19] 2025-11-24 20:27:23,743 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 21:28:19] 2025-11-24 20:27:23,743 | INFO     | ready for new job
[2025-11-24 21:28:19] 2025-11-24 20:27:23,743 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 21:28:19] 2025-11-24 20:27:23,746 | INFO     | ***************************************
[2025-11-24 21:28:19] 2025-11-24 20:27:23,746 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 21:28:19] 2025-11-24 20:27:23,746 | INFO     | ***************************************
[2025-11-24 21:28:19] 2025-11-24 20:27:23,746 | INFO     | 
[2025-11-24 21:28:19] 2025-11-24 20:27:23,747 | INFO     | architecture information:
[2025-11-24 21:28:19] 2025-11-24 20:27:23,747 | INFO     | executing command: cat /etc/os-release
[2025-11-24 21:28:19] 2025-11-24 20:27:23,757 | INFO     | cat /etc/os-release:
[2025-11-24 21:28:19] NAME="CentOS Linux"
[2025-11-24 21:28:19] VERSION="7 (Core)"
[2025-11-24 21:28:19] ID="centos"
[2025-11-24 21:28:19] ID_LIKE="rhel fedora"
[2025-11-24 21:28:19] VERSION_ID="7"
[2025-11-24 21:28:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 21:28:19] ANSI_COLOR="0;31"
[2025-11-24 21:28:19] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 21:28:19] HOME_URL="https://www.centos.org/"
[2025-11-24 21:28:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 21:28:19] 
[2025-11-24 21:28:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 21:28:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 21:28:19] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 21:28:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 21:28:19] 
[2025-11-24 21:28:19] 2025-11-24 20:27:23,757 | INFO     | ***************************************
[2025-11-24 21:28:19] 2025-11-24 20:27:24,260 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/3
[2025-11-24 21:28:19] 2025-11-24 20:27:24,273 | INFO     | sufficient remaining disk space (80888201216 B)
[2025-11-24 21:28:19] 2025-11-24 20:27:24,273 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 21:28:19] 2025-11-24 20:27:24,274 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 21:28:19] 2025-11-24 20:27:24,274 | INFO     | update_server=False
[2025-11-24 21:28:19] 2025-11-24 20:27:24,274 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 21:28:19] 2025-11-24 20:27:24,274 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 21:28:19] 2025-11-24 20:27:24,276 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 21:28:19] 2025-11-24 20:27:24,838 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 21:28:19] 2025-11-24 20:27:24,838 | INFO     | aborting loop
[2025-11-24 21:28:19] 2025-11-24 20:27:24,924 | INFO     | all data control threads have been joined
[2025-11-24 21:28:19] 2025-11-24 20:27:25,006 | INFO     | all job control threads have been joined
[2025-11-24 21:28:19] 2025-11-24 20:27:25,276 | INFO     | [job] retrieve thread has finished
[2025-11-24 21:28:19] 2025-11-24 20:27:25,279 | INFO     | [job] queue monitor thread has finished
[2025-11-24 21:28:19] 2025-11-24 20:27:25,764 | INFO     | all payload control threads have been joined
[2025-11-24 21:28:19] 2025-11-24 20:27:25,837 | INFO     | [payload] failed_post thread has finished
[2025-11-24 21:28:19] 2025-11-24 20:27:25,844 | INFO     | [job] job monitor thread has finished
[2025-11-24 21:28:19] 2025-11-24 20:27:25,930 | INFO     | [data] control thread has finished
[2025-11-24 21:28:19] 2025-11-24 20:27:26,011 | INFO     | [job] control thread has finished
[2025-11-24 21:28:19] 2025-11-24 20:27:26,083 | INFO     | [job] validate thread has finished
[2025-11-24 21:28:19] 2025-11-24 20:27:26,136 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 21:28:19] 2025-11-24 20:27:26,271 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 21:28:19] 2025-11-24 20:27:26,281 | INFO     | [data] copytool_out thread has finished
[2025-11-24 21:28:19] 2025-11-24 20:27:26,449 | INFO     | [payload] validate_post thread has finished
[2025-11-24 21:28:19] 2025-11-24 20:27:26,505 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 21:28:19] 2025-11-24 20:27:26,515 | INFO     | [data] copytool_in thread has finished
[2025-11-24 21:28:19] 2025-11-24 20:27:26,762 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 21:28:19] 2025-11-24 20:27:26,765 | INFO     | [payload] control thread has finished
[2025-11-24 21:28:19] 2025-11-24 20:27:27,741 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 21:28:19] 2025-11-24 20:27:31,746 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 21:28:19] 2025-11-24 20:27:53,886 | INFO     | PID=2917312 has CPU usage=5.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-24 21:28:19] 2025-11-24 20:27:53,886 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 21:28:19] 2025-11-24 20:27:53,886 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 21:28:19] 2025-11-24 20:27:53,887 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 21:28:19] 2025-11-24 20:28:12,642 | INFO     | [monitor] cgroup control has ended
[2025-11-24 21:28:19] 2025-11-24 20:28:14,115 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 135527435765568)>', '<ExcThread(monitor, started 135526946432768)>']
[2025-11-24 21:28:19] 2025-11-24 20:28:14,985 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 21:28:19] 2025-11-24 20:28:14,986 | INFO     | [monitor] control thread has ended
[2025-11-24 21:28:19] 2025-11-24 20:28:19,140 | INFO     | all workflow threads have been joined
[2025-11-24 21:28:19] 2025-11-24 20:28:19,140 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 21:28:19] 2025-11-24 20:28:19,140 | INFO     | traces error code: 0
[2025-11-24 21:28:19] 2025-11-24 20:28:19,140 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 21:28:19] 2025-11-24 20:28:19,207 [wrapper] ==== pilot stdout END ====
[2025-11-24 21:28:19] 2025-11-24 20:28:19,210 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 21:28:19] 2025-11-24 20:28:19,212 [wrapper] pilotpid: 2917312
[2025-11-24 21:28:19] 2025-11-24 20:28:19,214 [wrapper] Pilot exit status: 0
[2025-11-24 21:28:19] 2025-11-24 20:28:19,223 [wrapper] pandaids: 6895358852
[2025-11-24 21:28:19] 2025-11-24 20:28:19,253 [wrapper] cleanup supervisor_pilot 3333931 2917313
[2025-11-24 21:28:19] 2025-11-24 20:28:19,255 [wrapper] Test setup, not cleaning
[2025-11-24 21:28:19] 2025-11-24 20:28:19,257 [wrapper] apfmon messages muted
[2025-11-24 21:28:19] 2025-11-24 20:28:19,260 [wrapper] ==== wrapper stdout END ====
[2025-11-24 21:28:19] 2025-11-24 20:28:19,262 [wrapper] ==== wrapper stderr END ====
[2025-11-24 21:28:19]  *** Error codes and diagnostics ***
[2025-11-24 21:28:19]     "exeErrorCode": 0,
[2025-11-24 21:28:19]     "exeErrorDiag": "",
[2025-11-24 21:28:19]     "pilotErrorCode": 0,
[2025-11-24 21:28:19]     "pilotErrorDiag": "",
[2025-11-24 21:28:19]  *** Listing of results directory ***
[2025-11-24 21:28:19] insgesamt 1312024
[2025-11-24 21:28:19] -rw-r--r-- 1 boinc boinc    576529 Nov 23 13:50 pilot3.tar.gz
[2025-11-24 21:28:19] -rw-r--r-- 1 boinc boinc      5112 Nov 23 14:03 queuedata.json
[2025-11-24 21:28:19] -rwx------ 1 boinc boinc     36292 Nov 23 14:05 runpilot2-wrapper.sh
[2025-11-24 21:28:19] -rw-r--r-- 1 boinc boinc       100 Nov 24 09:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 21:28:19] -rwxr-xr-x 1 boinc boinc      7986 Nov 24 09:52 run_atlas
[2025-11-24 21:28:19] -rw-r--r-- 1 boinc boinc       105 Nov 24 09:52 job.xml
[2025-11-24 21:28:19] -rw-r--r-- 1 boinc boinc      9699 Nov 24 09:52 init_data.xml
[2025-11-24 21:28:19] -rw-r--r-- 2 boinc boinc 411450317 Nov 24 09:52 EVNT.47483658._000740.pool.root.1
[2025-11-24 21:28:19] -rw-r--r-- 2 boinc boinc     15847 Nov 24 09:52 start_atlas.sh
[2025-11-24 21:28:19] drwxrwx--x 2 boinc boinc      4096 Nov 24 09:52 shared
[2025-11-24 21:28:19] -rw-r--r-- 2 boinc boinc    590104 Nov 24 09:52 input.tar.gz
[2025-11-24 21:28:19] -rw-r--r-- 1 boinc boinc         0 Nov 24 09:52 boinc_lockfile
[2025-11-24 21:28:19] -rw-r--r-- 1 boinc boinc      2785 Nov 24 09:52 pandaJob.out
[2025-11-24 21:28:19] -rw------- 1 boinc boinc    989794 Nov 24 09:52 agis_schedconf.cvmfs.json
[2025-11-24 21:28:19] drwx------ 5 boinc boinc      4096 Nov 24 09:52 pilot3
[2025-11-24 21:28:19] -rw-r--r-- 1 boinc boinc       532 Nov 24 21:22 boinc_task_state.xml
[2025-11-24 21:28:19] -rw------- 1 boinc boinc 913583576 Nov 24 21:26 HITS.47556137._007353.pool.root.1
[2025-11-24 21:28:19] -rw------- 1 boinc boinc      1023 Nov 24 21:27 memory_monitor_summary.json
[2025-11-24 21:28:19] -rw------- 1 boinc boinc   1516227 Nov 24 21:27 agis_ddmendpoints.agis.ALL.json
[2025-11-24 21:28:19] -rw------- 1 boinc boinc   1465878 Nov 24 21:27 log.47556137._007353.job.log.tgz.1
[2025-11-24 21:28:19] -rw------- 1 boinc boinc      8563 Nov 24 21:27 heartbeat.json
[2025-11-24 21:28:19] -rw------- 1 boinc boinc        95 Nov 24 21:27 pilot_heartbeat.json
[2025-11-24 21:28:19] -rw------- 1 boinc boinc      4755 Nov 24 21:28 pilotlog.txt
[2025-11-24 21:28:19] -rw------- 1 boinc boinc   5813528 Nov 24 21:28 log.47556137._007353.job.log.1
[2025-11-24 21:28:19] -rw------- 1 boinc boinc       353 Nov 24 21:28 output.list
[2025-11-24 21:28:19] -rw-r--r-- 1 boinc boinc      8192 Nov 24 21:28 boinc_mmap_file
[2025-11-24 21:28:19] -rw-r--r-- 1 boinc boinc       620 Nov 24 21:28 runtime_log
[2025-11-24 21:28:19] -rw------- 1 boinc boinc   7301120 Nov 24 21:28 result.tar.gz
[2025-11-24 21:28:19] -rw-r--r-- 1 boinc boinc        29 Nov 24 21:28 wrapper_checkpoint.txt
[2025-11-24 21:28:19] -rw------- 1 boinc boinc       652 Nov 24 21:28 w6BLDmkxOh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmtuKKDmTM1lFn.diag
[2025-11-24 21:28:19] -rw-r--r-- 1 boinc boinc      8896 Nov 24 21:28 runtime_log.err
[2025-11-24 21:28:19] -rw-r--r-- 1 boinc boinc     21455 Nov 24 21:28 stderr.txt
[2025-11-24 21:28:19] HITS file was successfully produced:
[2025-11-24 21:28:19] -rw------- 1 boinc boinc 913583576 Nov 24 21:26 shared/HITS.pool.root.1
[2025-11-24 21:28:19]  *** Contents of shared directory: ***
[2025-11-24 21:28:19] insgesamt 1301716
[2025-11-24 21:28:19] -rw-r--r-- 2 boinc boinc 411450317 Nov 24 09:52 ATLAS.root_0
[2025-11-24 21:28:19] -rw-r--r-- 2 boinc boinc     15847 Nov 24 09:52 start_atlas.sh
[2025-11-24 21:28:19] -rw-r--r-- 2 boinc boinc    590104 Nov 24 09:52 input.tar.gz
[2025-11-24 21:28:19] -rw------- 1 boinc boinc 913583576 Nov 24 21:26 HITS.pool.root.1
[2025-11-24 21:28:19] -rw------- 1 boinc boinc   7301120 Nov 24 21:28 result.tar.gz
21:28:21 (2913467): run_atlas exited; CPU time 165793.244941
21:28:21 (2913467): called boinc_finish(0)

</stderr_txt>
]]>

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