Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
15:40:34 (2786445): wrapper (7.7.26015): starting
15:40:34 (2786445): wrapper: running run_atlas (--nthreads 4)
[2025-11-26 15:40:34] Arguments: --nthreads 4
[2025-11-26 15:40:34] Threads: 4
[2025-11-26 15:40:34] Checking for CVMFS
[2025-11-26 15:40:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 15:40:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 15:40:34] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 15:40:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 15:40:34] 2.9.2.0 1145218 11304 90288 153324 0 81 31552487 36864000 0 130560 0 4556866 99.938 563817 7895 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-26 15:40:34] CVMFS is ok
[2025-11-26 15:40:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 15:40:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 15:40:34] Further information can be found at the LHC@home message board.
[2025-11-26 15:40:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 15:40:34] Checking for apptainer binary...
[2025-11-26 15:40:34] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 15:40:34] Running /usr/bin/apptainer --version
[2025-11-26 15:40:34] apptainer version 1.4.1-1.1
[2025-11-26 15:40:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 15:40:34] thA315a
[2025-11-26 15:40:34] apptainer works
[2025-11-26 15:40:34] Set ATHENA_PROC_NUMBER=4
[2025-11-26 15:40:34] Set ATHENA_CORE_NUMBER=4
[2025-11-26 15:40:34] Starting ATLAS job with PandaID=6895372690
[2025-11-26 15:40:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 22:33:37]  *** The last 200 lines of the pilot log: ***
[2025-11-26 22:33:37] 2025-11-26 21:33:07,383 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 22:33:37] 2025-11-26 21:33:07,901 | INFO     | all data control threads have been joined
[2025-11-26 22:33:37] 2025-11-26 21:33:08,083 | INFO     | [job] retrieve thread has finished
[2025-11-26 22:33:37] 2025-11-26 21:33:08,084 | INFO     | [job] job monitor thread has finished
[2025-11-26 22:33:37] 2025-11-26 21:33:08,084 | INFO     | [job] queue monitor thread has finished
[2025-11-26 22:33:37] 2025-11-26 21:33:08,106 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 22:33:37] 2025-11-26 21:33:08,140 | INFO     | [payload] control thread has finished
[2025-11-26 22:33:37] 2025-11-26 21:33:08,343 | INFO     | [job] control thread has finished
[2025-11-26 22:33:37] 2025-11-26 21:33:08,690 | INFO     | [job] validate thread has finished
[2025-11-26 22:33:37] 2025-11-26 21:33:08,745 | INFO     | [payload] validate_post thread has finished
[2025-11-26 22:33:37] 2025-11-26 21:33:08,907 | INFO     | [data] control thread has finished
[2025-11-26 22:33:37] 2025-11-26 21:33:08,967 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 22:33:37] 2025-11-26 21:33:09,034 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 22:33:37] 2025-11-26 21:33:09,327 | INFO     | [payload] failed_post thread has finished
[2025-11-26 22:33:37] 2025-11-26 21:33:09,389 | INFO     | [data] copytool_out thread has finished
[2025-11-26 22:33:37] 2025-11-26 21:33:09,441 | INFO     | [data] copytool_in thread has finished
[2025-11-26 22:33:37] 2025-11-26 21:33:10,099 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 22:33:37] 2025-11-26 21:33:13,687 | INFO     | [monitor] cgroup control has ended
[2025-11-26 22:33:37] 2025-11-26 21:33:14,106 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 22:33:37] 2025-11-26 21:33:17,455 | INFO     | job.realtimelogging is not enabled
[2025-11-26 22:33:37] 2025-11-26 21:33:18,461 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 22:33:37] 2025-11-26 21:33:18,748 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140135343306560)>', '<ExcThread(monitor, started 140134540355328)>']
[2025-11-26 22:33:37] 2025-11-26 21:33:23,774 | INFO     | all workflow threads have been joined
[2025-11-26 22:33:37] 2025-11-26 21:33:23,774 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 22:33:37] 2025-11-26 21:33:23,775 | INFO     | traces error code: 0
[2025-11-26 22:33:37] 2025-11-26 21:33:23,775 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 22:33:37] 2025-11-26 21:33:37,123 | INFO     | PID=2790234 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 22:33:37] 2025-11-26 21:33:37,123 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 22:33:37] 2025-11-26 21:33:37,123 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 22:33:37] 2025-11-26 21:33:37,124 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 22:33:37] 2025-11-26 21:33:37,124 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 22:33:37] 2025-11-26 21:33:37,124 | INFO     | [monitor] control thread has ended
[2025-11-26 22:33:37] 2025-11-26 21:33:37,188 [wrapper] ==== pilot stdout END ====
[2025-11-26 22:33:37] 2025-11-26 21:33:37,192 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 22:33:37] 2025-11-26 21:33:37,195 [wrapper] pilotpid: 2790234
[2025-11-26 22:33:37] 2025-11-26 21:33:37,199 [wrapper] Pilot exit status: 0
[2025-11-26 22:33:37] 2025-11-26 21:33:37,209 [wrapper] pandaids: 6895372690
[2025-11-26 22:33:37] 2025-11-26 21:33:37,230 [wrapper] cleanup supervisor_pilot 2848698 2790235
[2025-11-26 22:33:37] 2025-11-26 21:33:37,234 [wrapper] Test setup, not cleaning
[2025-11-26 22:33:37] 2025-11-26 21:33:37,237 [wrapper] apfmon messages muted
[2025-11-26 22:33:37] 2025-11-26 21:33:37,240 [wrapper] ==== wrapper stdout END ====
[2025-11-26 22:33:37] 2025-11-26 21:33:37,244 [wrapper] ==== wrapper stderr END ====
[2025-11-26 22:33:37]  *** Error codes and diagnostics ***
[2025-11-26 22:33:37]     "exeErrorCode": 0,
[2025-11-26 22:33:37]     "exeErrorDiag": "",
[2025-11-26 22:33:37]     "pilotErrorCode": 0,
[2025-11-26 22:33:37]     "pilotErrorDiag": "",
[2025-11-26 22:33:37]  *** Listing of results directory ***
[2025-11-26 22:33:37] total 1325308
[2025-11-26 22:33:37] -rw-r--r-- 1 boinc boinc      5112 Nov 23 23:10 queuedata.json
[2025-11-26 22:33:37] -rwx------ 1 boinc boinc     36292 Nov 23 23:10 runpilot2-wrapper.sh
[2025-11-26 22:33:37] -rw-r--r-- 1 boinc boinc    576529 Nov 23 23:10 pilot3.tar.gz
[2025-11-26 22:33:37] -rw-r--r-- 1 boinc boinc       100 Nov 26 15:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 22:33:37] -rwxr-xr-x 1 boinc boinc      7986 Nov 26 15:40 run_atlas
[2025-11-26 22:33:37] -rw-r--r-- 1 boinc boinc       105 Nov 26 15:40 job.xml
[2025-11-26 22:33:37] -rw-r--r-- 2 boinc boinc 413204155 Nov 26 15:40 EVNT.47483658._000912.pool.root.1
[2025-11-26 22:33:37] -rw-r--r-- 2 boinc boinc    590101 Nov 26 15:40 input.tar.gz
[2025-11-26 22:33:37] -rw-r--r-- 2 boinc boinc     15847 Nov 26 15:40 start_atlas.sh
[2025-11-26 22:33:37] drwxrwx--x 2 boinc boinc      4096 Nov 26 15:40 shared
[2025-11-26 22:33:37] -rw-r--r-- 1 boinc boinc         0 Nov 26 15:40 boinc_setup_complete
[2025-11-26 22:33:37] -rw-r--r-- 1 boinc boinc      6372 Nov 26 15:40 init_data.xml
[2025-11-26 22:33:37] -rw-r--r-- 1 boinc boinc         0 Nov 26 15:40 boinc_lockfile
[2025-11-26 22:33:37] -rw-r--r-- 1 boinc boinc      2785 Nov 26 15:40 pandaJob.out
[2025-11-26 22:33:37] -rw------- 1 boinc boinc    992360 Nov 26 15:40 agis_schedconf.cvmfs.json
[2025-11-26 22:33:37] drwx------ 5 boinc boinc      4096 Nov 26 15:40 pilot3
[2025-11-26 22:33:37] -rw-r--r-- 1 boinc boinc       532 Nov 26 22:28 boinc_task_state.xml
[2025-11-26 22:33:37] -rw------- 1 boinc boinc 930525129 Nov 26 22:32 HITS.47556137._008990.pool.root.1
[2025-11-26 22:33:37] -rw------- 1 boinc boinc        95 Nov 26 22:32 pilot_heartbeat.json
[2025-11-26 22:33:37] -rw------- 1 boinc boinc      1030 Nov 26 22:32 memory_monitor_summary.json
[2025-11-26 22:33:37] -rw------- 1 boinc boinc   1516240 Nov 26 22:32 agis_ddmendpoints.agis.ALL.json
[2025-11-26 22:33:37] -rw------- 1 boinc boinc   1258275 Nov 26 22:32 log.47556137._008990.job.log.tgz.1
[2025-11-26 22:33:37] -rw------- 1 boinc boinc      8574 Nov 26 22:33 heartbeat.json
[2025-11-26 22:33:37] -rw-r--r-- 1 boinc boinc        28 Nov 26 22:33 wrapper_checkpoint.txt
[2025-11-26 22:33:37] -rw-r--r-- 1 boinc boinc      8192 Nov 26 22:33 boinc_mmap_file
[2025-11-26 22:33:37] -rw------- 1 boinc boinc       747 Nov 26 22:33 pilotlog.txt
[2025-11-26 22:33:37] -rw------- 1 boinc boinc   3485883 Nov 26 22:33 log.47556137._008990.job.log.1
[2025-11-26 22:33:37] -rw------- 1 boinc boinc       353 Nov 26 22:33 output.list
[2025-11-26 22:33:37] -rw-r--r-- 1 boinc boinc       620 Nov 26 22:33 runtime_log
[2025-11-26 22:33:37] -rw------- 1 boinc boinc   4761600 Nov 26 22:33 result.tar.gz
[2025-11-26 22:33:37] -rw-r--r-- 1 boinc boinc      8903 Nov 26 22:33 runtime_log.err
[2025-11-26 22:33:37] -rw------- 1 boinc boinc       666 Nov 26 22:33 BzpLDmySXh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm0mIKDmHfGI1n.diag
[2025-11-26 22:33:37] -rw-r--r-- 1 boinc boinc      6758 Nov 26 22:33 stderr.txt
[2025-11-26 22:33:37] HITS file was successfully produced:
[2025-11-26 22:33:37] -rw------- 1 boinc boinc 930525129 Nov 26 22:32 shared/HITS.pool.root.1
[2025-11-26 22:33:37]  *** Contents of shared directory: ***
[2025-11-26 22:33:37] total 1317492
[2025-11-26 22:33:37] -rw-r--r-- 2 boinc boinc 413204155 Nov 26 15:40 ATLAS.root_0
[2025-11-26 22:33:37] -rw-r--r-- 2 boinc boinc    590101 Nov 26 15:40 input.tar.gz
[2025-11-26 22:33:37] -rw-r--r-- 2 boinc boinc     15847 Nov 26 15:40 start_atlas.sh
[2025-11-26 22:33:37] -rw------- 1 boinc boinc 930525129 Nov 26 22:32 HITS.pool.root.1
[2025-11-26 22:33:37] -rw------- 1 boinc boinc   4761600 Nov 26 22:33 result.tar.gz
22:33:38 (2786445): run_atlas exited; CPU time 96751.392432
22:33:38 (2786445): called boinc_finish(0)

</stderr_txt>
]]>

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