Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
03:47:46 (5080): wrapper (7.7.26015): starting
03:47:46 (5080): wrapper: running run_atlas (--nthreads 12)
[2025-11-24 03:47:46] Arguments: --nthreads 12
[2025-11-24 03:47:46] Threads: 12
[2025-11-24 03:47:46] Checking for CVMFS
[2025-11-24 03:47:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 03:47:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 03:47:46] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 03:47:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 03:47:47] 2.11.2.0 2924 284535 95940 153239 3 81 14014185 20275200 1 130560 4 129908052 99.966 17242186 14010 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-24 03:47:47] CVMFS is ok
[2025-11-24 03:47:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 03:47:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 03:47:47] Further information can be found at the LHC@home message board.
[2025-11-24 03:47:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 03:47:47] Checking for apptainer binary...
[2025-11-24 03:47:47] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 03:47:47] Running /usr/bin/apptainer --version
[2025-11-24 03:47:47] apptainer version 1.3.2-1.el7
[2025-11-24 03:47:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 03:47:48] c-205-28.aglt2.org
[2025-11-24 03:47:48] apptainer works
[2025-11-24 03:47:48] Set ATHENA_PROC_NUMBER=12
[2025-11-24 03:47:48] Set ATHENA_CORE_NUMBER=12
[2025-11-24 03:47:48] Starting ATLAS job with PandaID=6895358567
[2025-11-24 03:47:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 10:58:04]  *** The last 200 lines of the pilot log: ***
[2025-11-24 10:58:04] 2025-11-24 15:57:28,936 | INFO     | time since job start (25765s) is within the limit (172800.0s)
[2025-11-24 10:58:04] 2025-11-24 15:57:30,128 | INFO     | monitor loop #1930: job 0:6895358567 is in state 'finished'
[2025-11-24 10:58:04] 2025-11-24 15:57:30,128 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 10:58:04] 2025-11-24 15:57:30,941 | INFO     | time since job start (25767s) is within the limit (172800.0s)
[2025-11-24 10:58:04] 2025-11-24 15:57:31,384 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-24 10:58:04] 2025-11-24 15:57:31,388 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1695.8333333333333
[2025-11-24 10:58:04] 2025-11-24 15:57:31,391 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895358567/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 10:58:04] 2025-11-24 15:57:31,392 | INFO     | extracted standard info from prmon json
[2025-11-24 10:58:04] 2025-11-24 15:57:31,392 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 10:58:04] 2025-11-24 15:57:31,393 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 10:58:04] 2025-11-24 15:57:31,399 | INFO     | fitting pss+swap vs Time
[2025-11-24 10:58:04] 2025-11-24 15:57:31,400 | INFO     | sum of square deviations: 23302913082.334183
[2025-11-24 10:58:04] 2025-11-24 15:57:31,404 | INFO     | sum of deviations: 337898898287.05206
[2025-11-24 10:58:04] 2025-11-24 15:57:31,404 | INFO     | mean x: 1763986953.6895735
[2025-11-24 10:58:04] 2025-11-24 15:57:31,404 | INFO     | mean y: 3420069.511848341
[2025-11-24 10:58:04] 2025-11-24 15:57:31,404 | INFO     | intersect: -25574894802.043922
[2025-11-24 10:58:04] 2025-11-24 15:57:31,405 | INFO     | chi2: 5.687000737062348
[2025-11-24 10:58:04] 2025-11-24 15:57:31,405 | INFO     | sum of square deviations: 22484401204.652203
[2025-11-24 10:58:04] 2025-11-24 15:57:31,409 | INFO     | sum of deviations: 487112496174.97595
[2025-11-24 10:58:04] 2025-11-24 15:57:31,409 | INFO     | mean x: 1763986801.1918466
[2025-11-24 10:58:04] 2025-11-24 15:57:31,409 | INFO     | mean y: 3447840.87529976
[2025-11-24 10:58:04] 2025-11-24 15:57:31,409 | INFO     | intersect: -38212380373.86425
[2025-11-24 10:58:04] 2025-11-24 15:57:31,410 | INFO     | chi2: 3.042319148200115
[2025-11-24 10:58:04] 2025-11-24 15:57:31,410 | INFO     | current chi2=3.042319148200115 (change=46.50397830312852 %)
[2025-11-24 10:58:04] 2025-11-24 15:57:31,410 | INFO     | sum of square deviations: 21685285039.465927
[2025-11-24 10:58:04] 2025-11-24 15:57:31,414 | INFO     | sum of deviations: 555204914547.0925
[2025-11-24 10:58:04] 2025-11-24 15:57:31,414 | INFO     | mean x: 1763986648.6941748
[2025-11-24 10:58:04] 2025-11-24 15:57:31,414 | INFO     | mean y: 3460807.080097087
[2025-11-24 10:58:04] 2025-11-24 15:57:31,415 | INFO     | intersect: -45159609669.88431
[2025-11-24 10:58:04] 2025-11-24 15:57:31,415 | INFO     | chi2: 2.3394130886679436
[2025-11-24 10:58:04] 2025-11-24 15:57:31,415 | INFO     | current chi2=2.3394130886679436 (change=23.104284109969917 %)
[2025-11-24 10:58:04] 2025-11-24 15:57:31,415 | INFO     | right removable region: 411
[2025-11-24 10:58:04] 2025-11-24 15:57:31,416 | INFO     | sum of square deviations: 22484352404.6522
[2025-11-24 10:58:04] 2025-11-24 15:57:31,419 | INFO     | sum of deviations: 207705344211.8032
[2025-11-24 10:58:04] 2025-11-24 15:57:31,420 | INFO     | mean x: 1763987106.1918466
[2025-11-24 10:58:04] 2025-11-24 15:57:31,420 | INFO     | mean y: 3444238.1774580334
[2025-11-24 10:58:04] 2025-11-24 15:57:31,420 | INFO     | intersect: -16291868274.401339
[2025-11-24 10:58:04] 2025-11-24 15:57:31,421 | INFO     | chi2: 3.4953057430104724
[2025-11-24 10:58:04] 2025-11-24 15:57:31,421 | INFO     | current chi2=3.4953057430104724 (change=38.538679620147335 %)
[2025-11-24 10:58:04] 2025-11-24 15:57:31,421 | INFO     | sum of square deviations: 21685237946.233063
[2025-11-24 10:58:04] 2025-11-24 15:57:31,425 | INFO     | sum of deviations: 177536935773.51453
[2025-11-24 10:58:04] 2025-11-24 15:57:31,425 | INFO     | mean x: 1763987258.6893203
[2025-11-24 10:58:04] 2025-11-24 15:57:31,425 | INFO     | mean y: 3449987.980582524
[2025-11-24 10:58:04] 2025-11-24 15:57:31,425 | INFO     | intersect: -14438304971.209291
[2025-11-24 10:58:04] 2025-11-24 15:57:31,426 | INFO     | chi2: 3.4477508035029594
[2025-11-24 10:58:04] 2025-11-24 15:57:31,426 | INFO     | current chi2=3.4477508035029594 (change=1.3605373321806864 %)
[2025-11-24 10:58:04] 2025-11-24 15:57:31,426 | INFO     | left removable region: 20
[2025-11-24 10:58:04] 2025-11-24 15:57:31,426 | INFO     | sum of square deviations: 18535454693.22762
[2025-11-24 10:58:04] 2025-11-24 15:57:31,430 | INFO     | sum of deviations: 358811887391.70337
[2025-11-24 10:58:04] 2025-11-24 15:57:31,430 | INFO     | mean x: 1763987228.1943734
[2025-11-24 10:58:04] 2025-11-24 15:57:31,430 | INFO     | mean y: 3500580.3196930946
[2025-11-24 10:58:04] 2025-11-24 15:57:31,430 | INFO     | intersect: -34144007379.900047
[2025-11-24 10:58:04] 2025-11-24 15:57:31,431 | INFO     | chi2: 0.049201548241582516
[2025-11-24 10:58:04] 2025-11-24 15:57:31,431 | INFO     | current memory leak: 19.36 B/s (using 391 data points, chi2=0.05)
[2025-11-24 10:58:04] 2025-11-24 15:57:31,431 | INFO     | could have reported an average CPU frequency of 2385 MHz (18 samples)
[2025-11-24 10:58:04] 2025-11-24 15:57:31,431 | INFO     | ..............................
[2025-11-24 10:58:04] 2025-11-24 15:57:31,431 | INFO     | . Timing measurements:
[2025-11-24 10:58:04] 2025-11-24 15:57:31,431 | INFO     | . get job = 0 s
[2025-11-24 10:58:04] 2025-11-24 15:57:31,432 | INFO     | . initial setup = 2 s
[2025-11-24 10:58:04] 2025-11-24 15:57:31,432 | INFO     | . payload setup = 7 s
[2025-11-24 10:58:04] 2025-11-24 15:57:31,432 | INFO     | . stage-in = 0 s
[2025-11-24 10:58:04] 2025-11-24 15:57:31,432 | INFO     | . payload execution = 25730 s
[2025-11-24 10:58:04] 2025-11-24 15:57:31,432 | INFO     | . stage-out = 3 s
[2025-11-24 10:58:04] 2025-11-24 15:57:31,432 | INFO     | . log creation = 0 s
[2025-11-24 10:58:04] 2025-11-24 15:57:31,432 | INFO     | ..............................
[2025-11-24 10:58:04] 2025-11-24 15:57:31,701 | INFO     | 
[2025-11-24 10:58:04] 2025-11-24 15:57:31,702 | INFO     | job summary report
[2025-11-24 10:58:04] 2025-11-24 15:57:31,702 | INFO     | --------------------------------------------------
[2025-11-24 10:58:04] 2025-11-24 15:57:31,702 | INFO     | PanDA job id: 6895358567
[2025-11-24 10:58:04] 2025-11-24 15:57:31,702 | INFO     | task id: 47556137
[2025-11-24 10:58:04] 2025-11-24 15:57:31,702 | INFO     | errors: (none)
[2025-11-24 10:58:04] 2025-11-24 15:57:31,702 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 10:58:04] 2025-11-24 15:57:31,703 | INFO     | pilot state: finished 
[2025-11-24 10:58:04] 2025-11-24 15:57:31,703 | INFO     | transexitcode: 0
[2025-11-24 10:58:04] 2025-11-24 15:57:31,703 | INFO     | exeerrorcode: 0
[2025-11-24 10:58:04] 2025-11-24 15:57:31,703 | INFO     | exeerrordiag: 
[2025-11-24 10:58:04] 2025-11-24 15:57:31,703 | INFO     | exitcode: 0
[2025-11-24 10:58:04] 2025-11-24 15:57:31,703 | INFO     | exitmsg: OK
[2025-11-24 10:58:04] 2025-11-24 15:57:31,703 | INFO     | cpuconsumptiontime: 294407 s
[2025-11-24 10:58:04] 2025-11-24 15:57:31,703 | INFO     | nevents: 1000
[2025-11-24 10:58:04] 2025-11-24 15:57:31,703 | INFO     | neventsw: 0
[2025-11-24 10:58:04] 2025-11-24 15:57:31,704 | INFO     | pid: 15245
[2025-11-24 10:58:04] 2025-11-24 15:57:31,704 | INFO     | pgrp: 15245
[2025-11-24 10:58:04] 2025-11-24 15:57:31,704 | INFO     | corecount: 12
[2025-11-24 10:58:04] 2025-11-24 15:57:31,704 | INFO     | event service: False
[2025-11-24 10:58:04] 2025-11-24 15:57:31,704 | INFO     | sizes: {0: 2298807, 5: 2299069, 11: 2299125, 25741: 2336362, 25746: 2346203, 25752: 2346393}
[2025-11-24 10:58:04] 2025-11-24 15:57:31,704 | INFO     | --------------------------------------------------
[2025-11-24 10:58:04] 2025-11-24 15:57:31,704 | INFO     | 
[2025-11-24 10:58:04] 2025-11-24 15:57:31,704 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-24 10:58:04] 2025-11-24 15:57:31,729 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 10:58:04] 2025-11-24 15:57:31,729 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 10:58:04] 2025-11-24 15:57:31,729 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 10:58:04] 2025-11-24 15:57:31,730 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 10:58:04] 2025-11-24 15:57:31,730 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 10:58:04] 2025-11-24 15:57:31,730 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 10:58:04] 2025-11-24 15:57:31,730 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 10:58:04] 2025-11-24 15:57:31,730 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 10:58:04] 2025-11-24 15:57:31,730 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 10:58:04] 2025-11-24 15:57:31,731 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 10:58:04] 2025-11-24 15:57:31,731 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 10:58:04] 2025-11-24 15:57:31,731 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 10:58:04] 2025-11-24 15:57:31,731 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 10:58:04] 2025-11-24 15:57:31,731 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 10:58:04] 2025-11-24 15:57:31,732 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 10:58:04] 2025-11-24 15:57:31,732 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 10:58:04] 2025-11-24 15:57:31,732 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 10:58:04] 2025-11-24 15:57:31,732 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 10:58:04] 2025-11-24 15:57:31,732 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 10:58:04] 2025-11-24 15:57:31,732 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 10:58:04] 2025-11-24 15:57:31,733 | INFO     | job 6895358567 has completed (purged errors)
[2025-11-24 10:58:04] 2025-11-24 15:57:31,733 | INFO     | overall cleanup function is called
[2025-11-24 10:58:04] 2025-11-24 15:57:32,748 | INFO     | --- collectZombieJob: --- 10, [15245]
[2025-11-24 10:58:04] 2025-11-24 15:57:32,759 | INFO     | zombie collector waiting for pid 15245
[2025-11-24 10:58:04] 2025-11-24 15:57:32,759 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 10:58:04] 2025-11-24 15:57:32,759 | INFO     | collected zombie processes
[2025-11-24 10:58:04] 2025-11-24 15:57:32,759 | INFO     | will attempt to kill all subprocesses of pid=15245
[2025-11-24 10:58:04] 2025-11-24 15:57:32,846 | INFO     | process IDs to be killed: [15245] (in reverse order)
[2025-11-24 10:58:04] 2025-11-24 15:57:32,900 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 10:58:04] 2025-11-24 15:57:32,901 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 10:58:04] 2025-11-24 15:57:32,904 | INFO     | did not find any defunct processes belonging to 15245
[2025-11-24 10:58:04] 2025-11-24 15:57:32,907 | INFO     | did not find any defunct processes belonging to 15245
[2025-11-24 10:58:04] 2025-11-24 15:57:32,909 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 10:58:04] 2025-11-24 15:57:32,909 | INFO     | ready for new job
[2025-11-24 10:58:04] 2025-11-24 15:57:32,910 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 10:58:04] 2025-11-24 15:57:32,912 | INFO     | ***************************************
[2025-11-24 10:58:04] 2025-11-24 15:57:32,912 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 10:58:04] 2025-11-24 15:57:32,913 | INFO     | ***************************************
[2025-11-24 10:58:04] 2025-11-24 15:57:32,913 | INFO     | 
[2025-11-24 10:58:04] 2025-11-24 15:57:32,913 | INFO     | architecture information:
[2025-11-24 10:58:04] 2025-11-24 15:57:32,914 | INFO     | executing command: cat /etc/os-release
[2025-11-24 10:58:04] 2025-11-24 15:57:32,929 | INFO     | cat /etc/os-release:
[2025-11-24 10:58:04] NAME="CentOS Linux"
[2025-11-24 10:58:04] VERSION="7 (Core)"
[2025-11-24 10:58:04] ID="centos"
[2025-11-24 10:58:04] ID_LIKE="rhel fedora"
[2025-11-24 10:58:04] VERSION_ID="7"
[2025-11-24 10:58:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 10:58:04] ANSI_COLOR="0;31"
[2025-11-24 10:58:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 10:58:04] HOME_URL="https://www.centos.org/"
[2025-11-24 10:58:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 10:58:04] 
[2025-11-24 10:58:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 10:58:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 10:58:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 10:58:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 10:58:04] 
[2025-11-24 10:58:04] 2025-11-24 15:57:32,929 | INFO     | ***************************************
[2025-11-24 10:58:04] 2025-11-24 15:57:33,432 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-24 10:58:04] 2025-11-24 15:57:33,448 | INFO     | sufficient remaining disk space (28254928896 B)
[2025-11-24 10:58:04] 2025-11-24 15:57:33,449 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 10:58:04] 2025-11-24 15:57:33,449 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 10:58:04] 2025-11-24 15:57:33,449 | INFO     | update_server=False
[2025-11-24 10:58:04] 2025-11-24 15:57:33,449 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 10:58:04] 2025-11-24 15:57:33,450 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 10:58:04] 2025-11-24 15:57:33,626 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 10:58:04] 2025-11-24 15:57:33,636 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 10:58:04] 2025-11-24 15:57:33,636 | INFO     | aborting loop
[2025-11-24 10:58:04] 2025-11-24 15:57:33,976 | INFO     | all payload control threads have been joined
[2025-11-24 10:58:04] 2025-11-24 15:57:34,425 | INFO     | all data control threads have been joined
[2025-11-24 10:58:04] 2025-11-24 15:57:34,455 | INFO     | [job] retrieve thread has finished
[2025-11-24 10:58:04] 2025-11-24 15:57:34,455 | INFO     | [job] queue monitor thread has finished
[2025-11-24 10:58:04] 2025-11-24 15:57:34,635 | INFO     | all job control threads have been joined
[2025-11-24 10:58:04] 2025-11-24 15:57:34,642 | INFO     | [job] job monitor thread has finished
[2025-11-24 10:58:04] 2025-11-24 15:57:34,674 | INFO     | [data] copytool_in thread has finished
[2025-11-24 10:58:04] 2025-11-24 15:57:34,981 | INFO     | [payload] control thread has finished
[2025-11-24 10:58:04] 2025-11-24 15:57:35,129 | INFO     | [payload] validate_post thread has finished
[2025-11-24 10:58:04] 2025-11-24 15:57:35,402 | INFO     | [job] validate thread has finished
[2025-11-24 10:58:04] 2025-11-24 15:57:35,430 | INFO     | [data] control thread has finished
[2025-11-24 10:58:04] 2025-11-24 15:57:35,517 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 10:58:04] 2025-11-24 15:57:35,632 | INFO     | [payload] failed_post thread has finished
[2025-11-24 10:58:04] 2025-11-24 15:57:35,632 | INFO     | [data] copytool_out thread has finished
[2025-11-24 10:58:04] 2025-11-24 15:57:35,640 | INFO     | [job] control thread has finished
[2025-11-24 10:58:04] 2025-11-24 15:57:35,700 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 10:58:04] 2025-11-24 15:57:35,736 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 10:58:04] 2025-11-24 15:57:35,928 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 10:58:04] 2025-11-24 15:57:36,204 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 10:58:04] 2025-11-24 15:57:40,210 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 10:58:04] 2025-11-24 15:57:44,676 | INFO     | [monitor] cgroup control has ended
[2025-11-24 10:58:04] 2025-11-24 15:57:45,211 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139667398362944)>', '<ExcThread(monitor, started 139666657355520)>']
[2025-11-24 10:58:04] 2025-11-24 15:57:50,236 | INFO     | all workflow threads have been joined
[2025-11-24 10:58:04] 2025-11-24 15:57:50,236 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 10:58:04] 2025-11-24 15:57:50,239 | INFO     | traces error code: 0
[2025-11-24 10:58:04] 2025-11-24 15:57:50,240 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 10:58:04] 2025-11-24 15:58:04,140 | INFO     | PID=8767 has CPU usage=6.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-24 10:58:04] 2025-11-24 15:58:04,141 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 10:58:04] 2025-11-24 15:58:04,141 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 10:58:04] 2025-11-24 15:58:04,141 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 10:58:04] 2025-11-24 15:58:04,141 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 10:58:04] 2025-11-24 15:58:04,141 | INFO     | [monitor] control thread has ended
[2025-11-24 10:58:04] 2025-11-24 15:58:04,231 [wrapper] ==== pilot stdout END ====
[2025-11-24 10:58:04] 2025-11-24 15:58:04,234 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 10:58:04] 2025-11-24 15:58:04,238 [wrapper] pilotpid: 8767
[2025-11-24 10:58:04] 2025-11-24 15:58:04,242 [wrapper] Pilot exit status: 0
[2025-11-24 10:58:04] 2025-11-24 15:58:04,256 [wrapper] pandaids: 6895358567
[2025-11-24 10:58:04] 2025-11-24 15:58:04,295 [wrapper] cleanup supervisor_pilot  5453 8768
[2025-11-24 10:58:04] 2025-11-24 15:58:04,299 [wrapper] Test setup, not cleaning
[2025-11-24 10:58:04] 2025-11-24 15:58:04,304 [wrapper] apfmon messages muted
[2025-11-24 10:58:04] 2025-11-24 15:58:04,307 [wrapper] ==== wrapper stdout END ====
[2025-11-24 10:58:04] 2025-11-24 15:58:04,311 [wrapper] ==== wrapper stderr END ====
[2025-11-24 10:58:04]  *** Error codes and diagnostics ***
[2025-11-24 10:58:04]     "exeErrorCode": 0,
[2025-11-24 10:58:04]     "exeErrorDiag": "",
[2025-11-24 10:58:04]     "pilotErrorCode": 0,
[2025-11-24 10:58:04]     "pilotErrorDiag": "",
[2025-11-24 10:58:04]  *** Listing of results directory ***
[2025-11-24 10:58:04] total 1305736
[2025-11-24 10:58:04] -rwx------ 1 boincer umatlas     36292 Nov 23 07:50 runpilot2-wrapper.sh
[2025-11-24 10:58:04] -rw-r--r-- 1 boincer umatlas      5112 Nov 23 07:50 queuedata.json
[2025-11-24 10:58:04] -rw-r--r-- 1 boincer umatlas    576529 Nov 23 07:50 pilot3.tar.gz
[2025-11-24 10:58:04] -rw-r--r-- 1 boincer umatlas       100 Nov 24 03:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 10:58:04] -rwxr-xr-x 1 boincer umatlas      7986 Nov 24 03:47 run_atlas
[2025-11-24 10:58:04] -rw-r--r-- 1 boincer umatlas       105 Nov 24 03:47 job.xml
[2025-11-24 10:58:04] -rw-r--r-- 2 boincer umatlas 410124967 Nov 24 03:47 EVNT.47483658._000733.pool.root.1
[2025-11-24 10:58:04] -rw-r--r-- 2 boincer umatlas     15847 Nov 24 03:47 start_atlas.sh
[2025-11-24 10:58:04] drwxrwx--x 2 boincer umatlas      4096 Nov 24 03:47 shared
[2025-11-24 10:58:04] -rw-r--r-- 2 boincer umatlas    590092 Nov 24 03:47 input.tar.gz
[2025-11-24 10:58:04] -rw-r--r-- 1 boincer umatlas         0 Nov 24 03:47 boinc_lockfile
[2025-11-24 10:58:04] -rw-r--r-- 1 boincer umatlas      2786 Nov 24 03:47 pandaJob.out
[2025-11-24 10:58:04] -rw------- 1 boincer umatlas        57 Nov 24 03:47 setup.sh.local
[2025-11-24 10:58:04] -rw------- 1 boincer umatlas    989794 Nov 24 03:48 agis_schedconf.cvmfs.json
[2025-11-24 10:58:04] drwx------ 5 boincer umatlas      4096 Nov 24 03:48 pilot3
[2025-11-24 10:58:04] -rw-r--r-- 1 boincer umatlas       532 Nov 24 10:45 boinc_task_state.xml
[2025-11-24 10:58:04] -rw------- 1 boincer umatlas 911441867 Nov 24 10:56 HITS.47556137._007290.pool.root.1
[2025-11-24 10:58:04] -rw------- 1 boincer umatlas        95 Nov 24 10:57 pilot_heartbeat.json
[2025-11-24 10:58:04] -rw------- 1 boincer umatlas      1063 Nov 24 10:57 memory_monitor_summary.json
[2025-11-24 10:58:04] -rw------- 1 boincer umatlas   1516227 Nov 24 10:57 agis_ddmendpoints.agis.ALL.json
[2025-11-24 10:58:04] -rw------- 1 boincer umatlas   2188784 Nov 24 10:57 log.47556137._007290.job.log.tgz.1
[2025-11-24 10:58:04] -rw-r--r-- 1 boincer umatlas      5955 Nov 24 10:57 init_data.xml
[2025-11-24 10:58:04] -rw------- 1 boincer umatlas      8677 Nov 24 10:57 heartbeat.json
[2025-11-24 10:58:04] -rw-r--r-- 1 boincer umatlas      8192 Nov 24 10:57 boinc_mmap_file
[2025-11-24 10:58:04] -rw-r--r-- 1 boincer umatlas        29 Nov 24 10:57 wrapper_checkpoint.txt
[2025-11-24 10:58:04] -rw------- 1 boincer umatlas       744 Nov 24 10:58 pilotlog.txt
[2025-11-24 10:58:04] -rw------- 1 boincer umatlas   3605766 Nov 24 10:58 log.47556137._007290.job.log.1
[2025-11-24 10:58:04] -rw------- 1 boincer umatlas       353 Nov 24 10:58 output.list
[2025-11-24 10:58:04] -rw-r--r-- 1 boincer umatlas       620 Nov 24 10:58 runtime_log
[2025-11-24 10:58:04] -rw------- 1 boincer umatlas   5816320 Nov 24 10:58 result.tar.gz
[2025-11-24 10:58:04] -rw-r--r-- 1 boincer umatlas      9345 Nov 24 10:58 runtime_log.err
[2025-11-24 10:58:04] -rw------- 1 boincer umatlas       670 Nov 24 10:58 9vyLDmpiOh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm4tKKDmypQlgn.diag
[2025-11-24 10:58:04] -rw-r--r-- 1 boincer umatlas     21311 Nov 24 10:58 stderr.txt
[2025-11-24 10:58:04] HITS file was successfully produced:
[2025-11-24 10:58:04] -rw------- 1 boincer umatlas 911441867 Nov 24 10:56 shared/HITS.pool.root.1
[2025-11-24 10:58:04]  *** Contents of shared directory: ***
[2025-11-24 10:58:04] total 1296880
[2025-11-24 10:58:04] -rw-r--r-- 2 boincer umatlas 410124967 Nov 24 03:47 ATLAS.root_0
[2025-11-24 10:58:04] -rw-r--r-- 2 boincer umatlas     15847 Nov 24 03:47 start_atlas.sh
[2025-11-24 10:58:04] -rw-r--r-- 2 boincer umatlas    590092 Nov 24 03:47 input.tar.gz
[2025-11-24 10:58:04] -rw------- 1 boincer umatlas 911441867 Nov 24 10:56 HITS.pool.root.1
[2025-11-24 10:58:04] -rw------- 1 boincer umatlas   5816320 Nov 24 10:58 result.tar.gz
10:58:06 (5080): run_atlas exited; CPU time 287829.610269
10:58:06 (5080): called boinc_finish(0)

</stderr_txt>
]]>

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