Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:12:17 (18752): wrapper (7.7.26015): starting
22:12:17 (18752): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 22:12:17] Arguments: --nthreads 8
[2025-11-26 22:12:17] Threads: 8
[2025-11-26 22:12:17] Checking for CVMFS
[2025-11-26 22:12:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 22:12:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 22:12:18] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 22:12:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 22:12:20] 2.11.2.0 21240 285728 142728 153334 0 85 14503336 25165824 1338 130560 114 132726555 99.875 83712666 2990 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-26 22:12:20] CVMFS is ok
[2025-11-26 22:12:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 22:12:20] Checking for apptainer binary...
[2025-11-26 22:12:20] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 22:12:20] Running /usr/bin/apptainer --version
[2025-11-26 22:12:20] apptainer version 1.3.2-1.el7
[2025-11-26 22:12:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 22:12:44] cg-vwn384.simple-grid.lan
[2025-11-26 22:12:44] apptainer works
[2025-11-26 22:12:44] Set ATHENA_PROC_NUMBER=8
[2025-11-26 22:12:44] Set ATHENA_CORE_NUMBER=8
[2025-11-26 22:12:44] Starting ATLAS job with PandaID=6895358857
[2025-11-26 22:12:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/10 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 22:07:17]  *** The last 200 lines of the pilot log: ***
[2025-11-27 22:07:17] 2025-11-27 21:06:30,131 | INFO     | .. there are 9 such processes running
[2025-11-27 22:07:17] 2025-11-27 21:06:30,200 | INFO     | monitor loop #5779: job 0:6895358857 is in state 'finished'
[2025-11-27 22:07:17] 2025-11-27 21:06:30,200 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 22:07:17] 2025-11-27 21:06:31,132 | INFO     | time since job start (85809s) is within the limit (172800.0s)
[2025-11-27 22:07:17] 2025-11-27 21:06:32,709 | INFO     | monitor loop #5780: job 0:6895358857 is in state 'finished'
[2025-11-27 22:07:17] 2025-11-27 21:06:32,709 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 22:07:17] 2025-11-27 21:06:33,146 | INFO     | time since job start (85811s) is within the limit (172800.0s)
[2025-11-27 22:07:17] 2025-11-27 21:06:35,157 | INFO     | time since job start (85813s) is within the limit (172800.0s)
[2025-11-27 22:07:17] 2025-11-27 21:06:35,218 | INFO     | monitor loop #5781: job 0:6895358857 is in state 'finished'
[2025-11-27 22:07:17] 2025-11-27 21:06:35,218 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 22:07:17] 2025-11-27 21:06:37,164 | INFO     | time since job start (85815s) is within the limit (172800.0s)
[2025-11-27 22:07:17] 2025-11-27 21:06:37,722 | INFO     | monitor loop #5782: job 0:6895358857 is in state 'finished'
[2025-11-27 22:07:17] 2025-11-27 21:06:37,722 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 22:07:17] 2025-11-27 21:06:39,171 | INFO     | time since job start (85817s) is within the limit (172800.0s)
[2025-11-27 22:07:17] 2025-11-27 21:06:39,920 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 22:07:17] 2025-11-27 21:06:39,921 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-27 22:07:17] 2025-11-27 21:06:39,923 | INFO     | using path: /var/lib/boinc/slots/10/PanDA_Pilot-6895358857/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 22:07:17] 2025-11-27 21:06:39,924 | INFO     | extracted standard info from prmon json
[2025-11-27 22:07:17] 2025-11-27 21:06:39,924 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 22:07:17] 2025-11-27 21:06:39,924 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 22:07:17] 2025-11-27 21:06:39,960 | INFO     | fitting pss+swap vs Time
[2025-11-27 22:07:17] 2025-11-27 21:06:39,963 | INFO     | sum of square deviations: 845408660440.842
[2025-11-27 22:07:17] 2025-11-27 21:06:40,073 | INFO     | sum of deviations: 2551903444308.571
[2025-11-27 22:07:17] 2025-11-27 21:06:40,079 | INFO     | mean x: 1764234872.071582
[2025-11-27 22:07:17] 2025-11-27 21:06:40,080 | INFO     | mean y: 2843135.3743736576
[2025-11-27 22:07:17] 2025-11-27 21:06:40,080 | INFO     | intersect: -5322577879.665964
[2025-11-27 22:07:17] 2025-11-27 21:06:40,082 | INFO     | chi2: 25.299109181147443
[2025-11-27 22:07:17] 2025-11-27 21:06:40,084 | INFO     | sum of square deviations: 836364147430.079
[2025-11-27 22:07:17] 2025-11-27 21:06:40,147 | INFO     | sum of deviations: 3011937260101.983
[2025-11-27 22:07:17] 2025-11-27 21:06:40,147 | INFO     | mean x: 1764234719.575431
[2025-11-27 22:07:17] 2025-11-27 21:06:40,148 | INFO     | mean y: 2850891.081178161
[2025-11-27 22:07:17] 2025-11-27 21:06:40,148 | INFO     | intersect: -6350559048.575581
[2025-11-27 22:07:17] 2025-11-27 21:06:40,149 | INFO     | chi2: 22.093024180550547
[2025-11-27 22:07:17] 2025-11-27 21:06:40,150 | INFO     | current chi2=22.093024180550547 (change=12.67271893899738 %)
[2025-11-27 22:07:17] 2025-11-27 21:06:40,150 | INFO     | right removable region: 1391
[2025-11-27 22:07:17] 2025-11-27 21:06:40,152 | INFO     | sum of square deviations: 836363234260.0792
[2025-11-27 22:07:17] 2025-11-27 21:06:40,223 | INFO     | sum of deviations: 1957468528634.1968
[2025-11-27 22:07:17] 2025-11-27 21:06:40,224 | INFO     | mean x: 1764235024.575431
[2025-11-27 22:07:17] 2025-11-27 21:06:40,224 | INFO     | mean y: 2853156.9647988505
[2025-11-27 22:07:17] 2025-11-27 21:06:40,224 | INFO     | intersect: -4126255340.70344
[2025-11-27 22:07:17] 2025-11-27 21:06:40,225 | INFO     | chi2: 20.478290814676942
[2025-11-27 22:07:17] 2025-11-27 21:06:40,226 | INFO     | current chi2=20.478290814676942 (change=19.05528899042386 %)
[2025-11-27 22:07:17] 2025-11-27 21:06:40,226 | INFO     | left removable region: 10
[2025-11-27 22:07:17] 2025-11-27 21:06:40,228 | INFO     | sum of square deviations: 816691968826.256
[2025-11-27 22:07:17] 2025-11-27 21:06:40,238 | INFO     | monitor loop #5783: job 0:6895358857 is in state 'finished'
[2025-11-27 22:07:17] 2025-11-27 21:06:40,238 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 22:07:17] 2025-11-27 21:06:40,300 | INFO     | sum of deviations: 1992245121781.3325
[2025-11-27 22:07:17] 2025-11-27 21:06:40,301 | INFO     | mean x: 1764234994.083997
[2025-11-27 22:07:17] 2025-11-27 21:06:40,301 | INFO     | mean y: 2871670.816075308
[2025-11-27 22:07:17] 2025-11-27 21:06:40,301 | INFO     | intersect: -4300817718.576588
[2025-11-27 22:07:17] 2025-11-27 21:06:40,303 | INFO     | chi2: 12.82994417911345
[2025-11-27 22:07:17] 2025-11-27 21:06:40,303 | INFO     | current memory leak: 2.44 B/s (using 1381 data points, chi2=12.83)
[2025-11-27 22:07:17] 2025-11-27 21:06:40,304 | INFO     | could have reported an average CPU frequency of 1999 MHz (47 samples)
[2025-11-27 22:07:17] 2025-11-27 21:06:40,304 | INFO     | ..............................
[2025-11-27 22:07:17] 2025-11-27 21:06:40,304 | INFO     | . Timing measurements:
[2025-11-27 22:07:17] 2025-11-27 21:06:40,304 | INFO     | . get job = 0 s
[2025-11-27 22:07:17] 2025-11-27 21:06:40,305 | INFO     | . initial setup = 9 s
[2025-11-27 22:07:17] 2025-11-27 21:06:40,305 | INFO     | . payload setup = 169 s
[2025-11-27 22:07:17] 2025-11-27 21:06:40,305 | INFO     | . stage-in = 0 s
[2025-11-27 22:07:17] 2025-11-27 21:06:40,305 | INFO     | . payload execution = 85357 s
[2025-11-27 22:07:17] 2025-11-27 21:06:40,305 | INFO     | . stage-out = 4 s
[2025-11-27 22:07:17] 2025-11-27 21:06:40,305 | INFO     | . log creation = 1 s
[2025-11-27 22:07:17] 2025-11-27 21:06:40,305 | INFO     | ..............................
[2025-11-27 22:07:17] 2025-11-27 21:06:40,434 | INFO     | 
[2025-11-27 22:07:17] 2025-11-27 21:06:40,434 | INFO     | job summary report
[2025-11-27 22:07:17] 2025-11-27 21:06:40,434 | INFO     | --------------------------------------------------
[2025-11-27 22:07:17] 2025-11-27 21:06:40,434 | INFO     | PanDA job id: 6895358857
[2025-11-27 22:07:17] 2025-11-27 21:06:40,434 | INFO     | task id: 47556137
[2025-11-27 22:07:17] 2025-11-27 21:06:40,434 | INFO     | errors: (none)
[2025-11-27 22:07:17] 2025-11-27 21:06:40,435 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 22:07:17] 2025-11-27 21:06:40,435 | INFO     | pilot state: finished 
[2025-11-27 22:07:17] 2025-11-27 21:06:40,435 | INFO     | transexitcode: 0
[2025-11-27 22:07:17] 2025-11-27 21:06:40,435 | INFO     | exeerrorcode: 0
[2025-11-27 22:07:17] 2025-11-27 21:06:40,435 | INFO     | exeerrordiag: 
[2025-11-27 22:07:17] 2025-11-27 21:06:40,435 | INFO     | exitcode: 0
[2025-11-27 22:07:17] 2025-11-27 21:06:40,435 | INFO     | exitmsg: OK
[2025-11-27 22:07:17] 2025-11-27 21:06:40,435 | INFO     | cpuconsumptiontime: 321026 s
[2025-11-27 22:07:17] 2025-11-27 21:06:40,435 | INFO     | nevents: 1000
[2025-11-27 22:07:17] 2025-11-27 21:06:40,435 | INFO     | neventsw: 0
[2025-11-27 22:07:17] 2025-11-27 21:06:40,435 | INFO     | pid: 29161
[2025-11-27 22:07:17] 2025-11-27 21:06:40,435 | INFO     | pgrp: 29161
[2025-11-27 22:07:17] 2025-11-27 21:06:40,435 | INFO     | corecount: 8
[2025-11-27 22:07:17] 2025-11-27 21:06:40,436 | INFO     | event service: False
[2025-11-27 22:07:17] 2025-11-27 21:06:40,436 | INFO     | sizes: {0: 2284038, 1: 2284293, 12: 2284293, 23: 2284321, 33: 2284349, 44: 2284405, 55: 2284561, 65: 2284589, 76: 2284617, 87: 2284673, 97: 2284963, 98: 2285271, 8
[2025-11-27 22:07:17] 2025-11-27 21:06:40,436 | INFO     | --------------------------------------------------
[2025-11-27 22:07:17] 2025-11-27 21:06:40,436 | INFO     | 
[2025-11-27 22:07:17] 2025-11-27 21:06:40,436 | INFO     | executing command: ls -lF /var/lib/boinc/slots/10
[2025-11-27 22:07:17] 2025-11-27 21:06:40,838 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 22:07:17] 2025-11-27 21:06:40,838 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 22:07:17] 2025-11-27 21:06:40,838 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 22:07:17] 2025-11-27 21:06:40,838 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 22:07:17] 2025-11-27 21:06:40,839 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 22:07:17] 2025-11-27 21:06:40,839 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 22:07:17] 2025-11-27 21:06:40,839 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 22:07:17] 2025-11-27 21:06:40,839 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 22:07:17] 2025-11-27 21:06:40,839 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 22:07:17] 2025-11-27 21:06:40,839 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 22:07:17] 2025-11-27 21:06:40,839 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 22:07:17] 2025-11-27 21:06:40,839 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 22:07:17] 2025-11-27 21:06:40,840 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 22:07:17] 2025-11-27 21:06:40,840 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 22:07:17] 2025-11-27 21:06:40,840 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 22:07:17] 2025-11-27 21:06:40,840 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 22:07:17] 2025-11-27 21:06:40,840 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 22:07:17] 2025-11-27 21:06:40,840 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 22:07:17] 2025-11-27 21:06:40,840 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 22:07:17] 2025-11-27 21:06:40,841 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 22:07:17] 2025-11-27 21:06:40,841 | INFO     | job 6895358857 has completed (purged errors)
[2025-11-27 22:07:17] 2025-11-27 21:06:40,841 | INFO     | overall cleanup function is called
[2025-11-27 22:07:17] 2025-11-27 21:06:41,864 | INFO     | --- collectZombieJob: --- 10, [29161]
[2025-11-27 22:07:17] 2025-11-27 21:06:41,864 | INFO     | zombie collector waiting for pid 29161
[2025-11-27 22:07:17] 2025-11-27 21:06:41,864 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 22:07:17] 2025-11-27 21:06:41,864 | INFO     | collected zombie processes
[2025-11-27 22:07:17] 2025-11-27 21:06:41,865 | INFO     | will attempt to kill all subprocesses of pid=29161
[2025-11-27 22:07:17] 2025-11-27 21:06:41,982 | INFO     | process IDs to be killed: [29161] (in reverse order)
[2025-11-27 22:07:17] 2025-11-27 21:06:42,652 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 22:07:17] 2025-11-27 21:06:42,652 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 22:07:17] 2025-11-27 21:06:42,655 | INFO     | did not find any defunct processes belonging to 29161
[2025-11-27 22:07:17] 2025-11-27 21:06:42,658 | INFO     | did not find any defunct processes belonging to 29161
[2025-11-27 22:07:17] 2025-11-27 21:06:42,699 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 22:07:17] 2025-11-27 21:06:42,699 | INFO     | ready for new job
[2025-11-27 22:07:17] 2025-11-27 21:06:42,700 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 22:07:17] 2025-11-27 21:06:42,705 | INFO     | ***************************************
[2025-11-27 22:07:17] 2025-11-27 21:06:42,705 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 22:07:17] 2025-11-27 21:06:42,705 | INFO     | ***************************************
[2025-11-27 22:07:17] 2025-11-27 21:06:42,705 | INFO     | 
[2025-11-27 22:07:17] 2025-11-27 21:06:42,706 | INFO     | pilot is running in a VM
[2025-11-27 22:07:17] 2025-11-27 21:06:42,706 | INFO     | architecture information:
[2025-11-27 22:07:17] 2025-11-27 21:06:42,712 | INFO     | executing command: cat /etc/os-release
[2025-11-27 22:07:17] 2025-11-27 21:06:42,927 | INFO     | cat /etc/os-release:
[2025-11-27 22:07:17] NAME="CentOS Linux"
[2025-11-27 22:07:17] VERSION="7 (Core)"
[2025-11-27 22:07:17] ID="centos"
[2025-11-27 22:07:17] ID_LIKE="rhel fedora"
[2025-11-27 22:07:17] VERSION_ID="7"
[2025-11-27 22:07:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 22:07:17] ANSI_COLOR="0;31"
[2025-11-27 22:07:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 22:07:17] HOME_URL="https://www.centos.org/"
[2025-11-27 22:07:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 22:07:17] 
[2025-11-27 22:07:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 22:07:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 22:07:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 22:07:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 22:07:17] 
[2025-11-27 22:07:17] 2025-11-27 21:06:42,927 | INFO     | ***************************************
[2025-11-27 22:07:17] 2025-11-27 21:06:43,430 | INFO     | executing command: df -mP /var/lib/boinc/slots/10
[2025-11-27 22:07:17] 2025-11-27 21:06:43,652 | INFO     | sufficient remaining disk space (494845034496 B)
[2025-11-27 22:07:17] 2025-11-27 21:06:43,652 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 22:07:17] 2025-11-27 21:06:43,652 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 22:07:17] 2025-11-27 21:06:43,652 | INFO     | update_server=False
[2025-11-27 22:07:17] 2025-11-27 21:06:43,652 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 22:07:17] 2025-11-27 21:06:43,652 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 22:07:17] 2025-11-27 21:06:43,752 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 22:07:17] 2025-11-27 21:06:43,752 | INFO     | aborting loop
[2025-11-27 22:07:17] 2025-11-27 21:06:44,252 | INFO     | all payload control threads have been joined
[2025-11-27 22:07:17] 2025-11-27 21:06:44,324 | INFO     | all data control threads have been joined
[2025-11-27 22:07:17] 2025-11-27 21:06:44,659 | INFO     | [job] retrieve thread has finished
[2025-11-27 22:07:17] 2025-11-27 21:06:44,758 | INFO     | [job] job monitor thread has finished
[2025-11-27 22:07:17] 2025-11-27 21:06:44,762 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 22:07:17] 2025-11-27 21:06:44,788 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 22:07:17] 2025-11-27 21:06:44,791 | INFO     | [payload] failed_post thread has finished
[2025-11-27 22:07:17] 2025-11-27 21:06:44,929 | INFO     | all job control threads have been joined
[2025-11-27 22:07:17] 2025-11-27 21:06:44,958 | INFO     | [payload] validate_post thread has finished
[2025-11-27 22:07:17] 2025-11-27 21:06:45,258 | INFO     | [payload] control thread has finished
[2025-11-27 22:07:17] 2025-11-27 21:06:45,330 | INFO     | [data] control thread has finished
[2025-11-27 22:07:17] 2025-11-27 21:06:45,454 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 22:07:17] 2025-11-27 21:06:45,657 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 22:07:17] 2025-11-27 21:06:45,710 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 22:07:17] 2025-11-27 21:06:45,722 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 22:07:17] 2025-11-27 21:06:45,733 | INFO     | [data] copytool_in thread has finished
[2025-11-27 22:07:17] 2025-11-27 21:06:45,931 | INFO     | [job] validate thread has finished
[2025-11-27 22:07:17] 2025-11-27 21:06:45,935 | INFO     | [job] control thread has finished
[2025-11-27 22:07:17] 2025-11-27 21:06:46,460 | INFO     | [job] queue monitor thread has finished
[2025-11-27 22:07:17] 2025-11-27 21:06:46,769 | INFO     | [data] copytool_out thread has finished
[2025-11-27 22:07:17] 2025-11-27 21:06:47,664 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 22:07:17] 2025-11-27 21:06:50,875 | INFO     | [monitor] cgroup control has ended
[2025-11-27 22:07:17] 2025-11-27 21:06:52,722 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140467042756416)>', '<ExcThread(monitor, started 140466586621696)>']
[2025-11-27 22:07:17] 2025-11-27 21:06:57,748 | INFO     | all workflow threads have been joined
[2025-11-27 22:07:17] 2025-11-27 21:06:57,748 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 22:07:17] 2025-11-27 21:06:57,749 | INFO     | traces error code: 0
[2025-11-27 22:07:17] 2025-11-27 21:06:57,749 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 22:07:17] 2025-11-27 21:07:12,387 | INFO     | PID=22567 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-27 22:07:17] 2025-11-27 21:07:12,387 | INFO     | .. there are 9 such processes running
[2025-11-27 22:07:17] 2025-11-27 21:07:12,387 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 22:07:17] 2025-11-27 21:07:12,388 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 22:07:17] 2025-11-27 21:07:12,388 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 22:07:17] 2025-11-27 21:07:12,388 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 22:07:17] 2025-11-27 21:07:12,388 | INFO     | [monitor] control thread has ended
[2025-11-27 22:07:17] 2025-11-27 21:07:12,658 [wrapper] ==== pilot stdout END ====
[2025-11-27 22:07:17] 2025-11-27 21:07:12,784 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 22:07:17] 2025-11-27 21:07:12,888 [wrapper] pilotpid: 22567
[2025-11-27 22:07:17] 2025-11-27 21:07:12,990 [wrapper] Pilot exit status: 0
[2025-11-27 22:07:17] 2025-11-27 21:07:13,420 [wrapper] pandaids: 6895358857
[2025-11-27 22:07:17] 2025-11-27 21:07:14,286 [wrapper] cleanup supervisor_pilot  3019 22568
[2025-11-27 22:07:17] 2025-11-27 21:07:14,370 [wrapper] Test setup, not cleaning
[2025-11-27 22:07:17] 2025-11-27 21:07:14,493 [wrapper] apfmon messages muted
[2025-11-27 22:07:17] 2025-11-27 21:07:14,561 [wrapper] ==== wrapper stdout END ====
[2025-11-27 22:07:17] 2025-11-27 21:07:14,623 [wrapper] ==== wrapper stderr END ====
[2025-11-27 22:07:17]  *** Error codes and diagnostics ***
[2025-11-27 22:07:17]     "exeErrorCode": 0,
[2025-11-27 22:07:17]     "exeErrorDiag": "",
[2025-11-27 22:07:17]     "pilotErrorCode": 0,
[2025-11-27 22:07:17]     "pilotErrorDiag": "",
[2025-11-27 22:07:17]  *** Listing of results directory ***
[2025-11-27 22:07:17] total 1344948
[2025-11-27 22:07:17] -rw-r--r--. 1 boinc boinc    576529 Nov 23 13:50 pilot3.tar.gz
[2025-11-27 22:07:17] -rw-r--r--. 1 boinc boinc      5112 Nov 23 14:03 queuedata.json
[2025-11-27 22:07:17] -rwx------. 1 boinc boinc     36292 Nov 23 14:05 runpilot2-wrapper.sh
[2025-11-27 22:07:17] -rw-r--r--. 1 boinc boinc       100 Nov 26 22:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 22:07:17] -rwxr-xr-x. 1 boinc boinc      7986 Nov 26 22:12 run_atlas
[2025-11-27 22:07:17] -rw-r--r--. 1 boinc boinc       105 Nov 26 22:12 job.xml
[2025-11-27 22:07:17] -rw-r--r--. 2 boinc boinc 411450317 Nov 26 22:12 EVNT.47483658._000740.pool.root.1
[2025-11-27 22:07:17] -rw-r--r--. 2 boinc boinc     15847 Nov 26 22:12 start_atlas.sh
[2025-11-27 22:07:17] drwxrwx--x. 2 boinc boinc        68 Nov 26 22:12 shared
[2025-11-27 22:07:17] -rw-r--r--. 2 boinc boinc    590104 Nov 26 22:12 input.tar.gz
[2025-11-27 22:07:17] -rw-r--r--. 1 boinc boinc      6393 Nov 26 22:12 init_data.xml
[2025-11-27 22:07:17] -rw-r--r--. 1 boinc boinc         0 Nov 26 22:12 boinc_lockfile
[2025-11-27 22:07:17] -rw-r--r--. 1 boinc boinc      2785 Nov 26 22:12 pandaJob.out
[2025-11-27 22:07:17] -rw-------. 1 boinc boinc    991538 Nov 26 22:16 agis_schedconf.cvmfs.json
[2025-11-27 22:07:17] drwx------. 5 boinc boinc      4096 Nov 26 22:16 pilot3
[2025-11-27 22:07:17] -rw-r--r--. 1 boinc boinc       533 Nov 27 21:35 boinc_task_state.xml
[2025-11-27 22:07:17] -rw-------. 1 boinc boinc 934042610 Nov 27 22:03 HITS.47556137._007358.pool.root.1
[2025-11-27 22:07:17] -rw-------. 1 boinc boinc      1029 Nov 27 22:04 memory_monitor_summary.json
[2025-11-27 22:07:17] -rw-------. 1 boinc boinc   1516240 Nov 27 22:04 agis_ddmendpoints.agis.ALL.json
[2025-11-27 22:07:17] -rw-------. 1 boinc boinc   2474818 Nov 27 22:04 log.47556137._007358.job.log.tgz.1
[2025-11-27 22:07:17] -rw-------. 1 boinc boinc        95 Nov 27 22:06 pilot_heartbeat.json
[2025-11-27 22:07:17] -rw-------. 1 boinc boinc      7948 Nov 27 22:06 heartbeat.json
[2025-11-27 22:07:17] -rw-r--r--. 1 boinc boinc      8192 Nov 27 22:07 boinc_mmap_file
[2025-11-27 22:07:17] -rw-r--r--. 1 boinc boinc        29 Nov 27 22:07 wrapper_checkpoint.txt
[2025-11-27 22:07:17] -rw-------. 1 boinc boinc       820 Nov 27 22:07 pilotlog.txt
[2025-11-27 22:07:17] -rw-------. 1 boinc boinc  11443113 Nov 27 22:07 log.47556137._007358.job.log.1
[2025-11-27 22:07:17] -rw-------. 1 boinc boinc       353 Nov 27 22:07 output.list
[2025-11-27 22:07:17] -rw-r--r--. 1 boinc boinc       620 Nov 27 22:07 runtime_log
[2025-11-27 22:07:17] -rw-------. 1 boinc boinc  13936640 Nov 27 22:07 result.tar.gz
[2025-11-27 22:07:17] -rw-r--r--. 1 boinc boinc      8833 Nov 27 22:07 runtime_log.err
[2025-11-27 22:07:17] -rw-------. 1 boinc boinc       662 Nov 27 22:07 RhILDmkxOh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmyuKKDmpBsP5n.diag
[2025-11-27 22:07:17] -rw-r--r--. 1 boinc boinc     21416 Nov 27 22:07 stderr.txt
[2025-11-27 22:07:17] HITS file was successfully produced:
[2025-11-27 22:07:17] -rw-------. 1 boinc boinc 934042610 Nov 27 22:03 shared/HITS.pool.root.1
[2025-11-27 22:07:17]  *** Contents of shared directory: ***
[2025-11-27 22:07:17] total 1328168
[2025-11-27 22:07:17] -rw-r--r--. 2 boinc boinc 411450317 Nov 26 22:12 ATLAS.root_0
[2025-11-27 22:07:17] -rw-r--r--. 2 boinc boinc     15847 Nov 26 22:12 start_atlas.sh
[2025-11-27 22:07:17] -rw-r--r--. 2 boinc boinc    590104 Nov 26 22:12 input.tar.gz
[2025-11-27 22:07:17] -rw-------. 1 boinc boinc 934042610 Nov 27 22:03 HITS.pool.root.1
[2025-11-27 22:07:17] -rw-------. 1 boinc boinc  13936640 Nov 27 22:07 result.tar.gz
22:07:19 (18752): run_atlas exited; CPU time 321611.811585
22:07:19 (18752): called boinc_finish(0)

</stderr_txt>
]]>

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