Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
02:16:41 (1775717): wrapper (7.7.26015): starting
02:16:41 (1775717): wrapper: running run_atlas (--nthreads 2)
[2025-11-28 02:16:41] Arguments: --nthreads 2
[2025-11-28 02:16:41] Threads: 2
[2025-11-28 02:16:41] Checking for CVMFS
[2025-11-28 02:16:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-28 02:16:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-28 02:16:41] Running cvmfs_config stat atlas.cern.ch
[2025-11-28 02:16:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-28 02:16:41] 2.9.2.0 187177 13409 66400 153391 0 81 32153263 36864001 0 130560 0 4326022 99.933 656676 4963 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-28 02:16:41] CVMFS is ok
[2025-11-28 02:16:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-28 02:16:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-28 02:16:41] Further information can be found at the LHC@home message board.
[2025-11-28 02:16:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-28 02:16:41] Checking for apptainer binary...
[2025-11-28 02:16:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-28 02:16:41] Running /usr/bin/apptainer --version
[2025-11-28 02:16:41] apptainer version 1.4.1-1.1
[2025-11-28 02:16:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-28 02:16:41] thA366
[2025-11-28 02:16:41] apptainer works
[2025-11-28 02:16:41] Set ATHENA_PROC_NUMBER=2
[2025-11-28 02:16:41] Set ATHENA_CORE_NUMBER=2
[2025-11-28 02:16:41] Starting ATLAS job with PandaID=6895358598
[2025-11-28 02:16:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-28 14:29:03]  *** The last 200 lines of the pilot log: ***
[2025-11-28 14:29:03] 2025-11-28 13:28:22,040 | INFO     | monitor loop #3350: job 0:6895358598 is in state 'finished'
[2025-11-28 14:29:03] 2025-11-28 13:28:22,040 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 14:29:03] 2025-11-28 13:28:23,089 | INFO     | time since job start (43888s) is within the limit (172800.0s)
[2025-11-28 14:29:03] 2025-11-28 13:28:23,945 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-28 14:29:03] 2025-11-28 13:28:23,946 | INFO     | found 8 cores (8 cores per socket, 1 socket) , CPU MHz: 4000.2918750000003
[2025-11-28 14:29:03] 2025-11-28 13:28:23,947 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6895358598/memory_monitor_summary.json (trf name=prmon)
[2025-11-28 14:29:03] 2025-11-28 13:28:23,947 | INFO     | extracted standard info from prmon json
[2025-11-28 14:29:03] 2025-11-28 13:28:23,947 | INFO     | extracted standard memory fields from prmon json
[2025-11-28 14:29:03] 2025-11-28 13:28:23,947 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-28 14:29:03] 2025-11-28 13:28:23,951 | INFO     | fitting pss+swap vs Time
[2025-11-28 14:29:03] 2025-11-28 13:28:23,952 | INFO     | sum of square deviations: 115256188920.0
[2025-11-28 14:29:03] 2025-11-28 13:28:23,957 | INFO     | sum of deviations: 313258540082.99994
[2025-11-28 14:29:03] 2025-11-28 13:28:23,957 | INFO     | mean x: 1764314543.0
[2025-11-28 14:29:03] 2025-11-28 13:28:23,957 | INFO     | mean y: 2034501.4436717664
[2025-11-28 14:29:03] 2025-11-28 13:28:23,957 | INFO     | intersect: -4793253310.571423
[2025-11-28 14:29:03] 2025-11-28 13:28:23,957 | INFO     | chi2: 3.0489000074086956
[2025-11-28 14:29:03] 2025-11-28 13:28:23,958 | INFO     | sum of square deviations: 112868358102.5
[2025-11-28 14:29:03] 2025-11-28 13:28:23,962 | INFO     | sum of deviations: 375987767228.99976
[2025-11-28 14:29:03] 2025-11-28 13:28:23,963 | INFO     | mean x: 1764314390.5
[2025-11-28 14:29:03] 2025-11-28 13:28:23,963 | INFO     | mean y: 2038495.3529411764
[2025-11-28 14:29:03] 2025-11-28 13:28:23,963 | INFO     | intersect: -5875256430.578965
[2025-11-28 14:29:03] 2025-11-28 13:28:23,963 | INFO     | chi2: 2.2696251955116096
[2025-11-28 14:29:03] 2025-11-28 13:28:23,963 | INFO     | current chi2=2.2696251955116096 (change=25.5592118470098 %)
[2025-11-28 14:29:03] 2025-11-28 13:28:23,963 | INFO     | sum of square deviations: 110513737210.0
[2025-11-28 14:29:03] 2025-11-28 13:28:23,968 | INFO     | sum of deviations: 369153847863.9999
[2025-11-28 14:29:03] 2025-11-28 13:28:23,968 | INFO     | mean x: 1764314238.0
[2025-11-28 14:29:03] 2025-11-28 13:28:23,968 | INFO     | mean y: 2038052.7291960507
[2025-11-28 14:29:03] 2025-11-28 13:28:23,968 | INFO     | intersect: -5891377609.808065
[2025-11-28 14:29:03] 2025-11-28 13:28:23,969 | INFO     | chi2: 2.269771300689942
[2025-11-28 14:29:03] 2025-11-28 13:28:23,969 | INFO     | current chi2=2.269771300689942 (change=-0.006437414363445632 %)
[2025-11-28 14:29:03] 2025-11-28 13:28:23,969 | INFO     | right removable region: 708
[2025-11-28 14:29:03] 2025-11-28 13:28:23,969 | INFO     | sum of square deviations: 112868358102.5
[2025-11-28 14:29:03] 2025-11-28 13:28:23,974 | INFO     | sum of deviations: 180944813742.00003
[2025-11-28 14:29:03] 2025-11-28 13:28:23,974 | INFO     | mean x: 1764314695.5
[2025-11-28 14:29:03] 2025-11-28 13:28:23,974 | INFO     | mean y: 2042941.8795518207
[2025-11-28 14:29:03] 2025-11-28 13:28:23,974 | INFO     | intersect: -2826416684.241738
[2025-11-28 14:29:03] 2025-11-28 13:28:23,975 | INFO     | chi2: 1.0905858604410705
[2025-11-28 14:29:03] 2025-11-28 13:28:23,975 | INFO     | current chi2=1.0905858604410705 (change=64.23018604116258 %)
[2025-11-28 14:29:03] 2025-11-28 13:28:23,975 | INFO     | sum of square deviations: 110513737210.0
[2025-11-28 14:29:03] 2025-11-28 13:28:23,980 | INFO     | sum of deviations: 142523955018.99988
[2025-11-28 14:29:03] 2025-11-28 13:28:23,980 | INFO     | mean x: 1764314848.0
[2025-11-28 14:29:03] 2025-11-28 13:28:23,980 | INFO     | mean y: 2045422.095909732
[2025-11-28 14:29:03] 2025-11-28 13:28:23,980 | INFO     | intersect: -2273301845.8901753
[2025-11-28 14:29:03] 2025-11-28 13:28:23,980 | INFO     | chi2: 0.8382112786929744
[2025-11-28 14:29:03] 2025-11-28 13:28:23,980 | INFO     | current chi2=0.8382112786929744 (change=23.141193270745976 %)
[2025-11-28 14:29:03] 2025-11-28 13:28:23,980 | INFO     | left removable region: 20
[2025-11-28 14:29:03] 2025-11-28 13:28:23,981 | INFO     | sum of square deviations: 100981733372.0
[2025-11-28 14:29:03] 2025-11-28 13:28:23,984 | INFO     | sum of deviations: 182846556574.0
[2025-11-28 14:29:03] 2025-11-28 13:28:23,985 | INFO     | mean x: 1764314817.5
[2025-11-28 14:29:03] 2025-11-28 13:28:23,985 | INFO     | mean y: 2050201.090116279
[2025-11-28 14:29:03] 2025-11-28 13:28:23,985 | INFO     | intersect: -3192575978.517628
[2025-11-28 14:29:03] 2025-11-28 13:28:23,985 | INFO     | chi2: 0.052632543351681015
[2025-11-28 14:29:03] 2025-11-28 13:28:23,985 | INFO     | current memory leak: 1.81 B/s (using 688 data points, chi2=0.05)
[2025-11-28 14:29:03] 2025-11-28 13:28:23,985 | INFO     | could have reported an average CPU frequency of 4469 MHz (28 samples)
[2025-11-28 14:29:03] 2025-11-28 13:28:23,985 | INFO     | ..............................
[2025-11-28 14:29:03] 2025-11-28 13:28:23,985 | INFO     | . Timing measurements:
[2025-11-28 14:29:03] 2025-11-28 13:28:23,985 | INFO     | . get job = 0 s
[2025-11-28 14:29:03] 2025-11-28 13:28:23,985 | INFO     | . initial setup = 1 s
[2025-11-28 14:29:03] 2025-11-28 13:28:23,985 | INFO     | . payload setup = 8 s
[2025-11-28 14:29:03] 2025-11-28 13:28:23,985 | INFO     | . stage-in = 0 s
[2025-11-28 14:29:03] 2025-11-28 13:28:23,985 | INFO     | . payload execution = 43850 s
[2025-11-28 14:29:03] 2025-11-28 13:28:23,985 | INFO     | . stage-out = 0 s
[2025-11-28 14:29:03] 2025-11-28 13:28:23,985 | INFO     | . log creation = 0 s
[2025-11-28 14:29:03] 2025-11-28 13:28:23,985 | INFO     | ..............................
[2025-11-28 14:29:03] 2025-11-28 13:28:24,014 | INFO     | 
[2025-11-28 14:29:03] 2025-11-28 13:28:24,014 | INFO     | job summary report
[2025-11-28 14:29:03] 2025-11-28 13:28:24,014 | INFO     | --------------------------------------------------
[2025-11-28 14:29:03] 2025-11-28 13:28:24,014 | INFO     | PanDA job id: 6895358598
[2025-11-28 14:29:03] 2025-11-28 13:28:24,014 | INFO     | task id: 47556137
[2025-11-28 14:29:03] 2025-11-28 13:28:24,014 | INFO     | errors: (none)
[2025-11-28 14:29:03] 2025-11-28 13:28:24,014 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-28 14:29:03] 2025-11-28 13:28:24,014 | INFO     | pilot state: finished 
[2025-11-28 14:29:03] 2025-11-28 13:28:24,014 | INFO     | transexitcode: 0
[2025-11-28 14:29:03] 2025-11-28 13:28:24,014 | INFO     | exeerrorcode: 0
[2025-11-28 14:29:03] 2025-11-28 13:28:24,014 | INFO     | exeerrordiag: 
[2025-11-28 14:29:03] 2025-11-28 13:28:24,014 | INFO     | exitcode: 0
[2025-11-28 14:29:03] 2025-11-28 13:28:24,014 | INFO     | exitmsg: OK
[2025-11-28 14:29:03] 2025-11-28 13:28:24,014 | INFO     | cpuconsumptiontime: 86786 s
[2025-11-28 14:29:03] 2025-11-28 13:28:24,014 | INFO     | nevents: 1000
[2025-11-28 14:29:03] 2025-11-28 13:28:24,014 | INFO     | neventsw: 0
[2025-11-28 14:29:03] 2025-11-28 13:28:24,014 | INFO     | pid: 1785850
[2025-11-28 14:29:03] 2025-11-28 13:28:24,014 | INFO     | pgrp: 1785850
[2025-11-28 14:29:03] 2025-11-28 13:28:24,014 | INFO     | corecount: 2
[2025-11-28 14:29:03] 2025-11-28 13:28:24,014 | INFO     | event service: False
[2025-11-28 14:29:03] 2025-11-28 13:28:24,014 | INFO     | sizes: {0: 2284312, 7: 2284574, 11: 2284602, 43862: 2330548, 43863: 2339604, 43870: 2339794}
[2025-11-28 14:29:03] 2025-11-28 13:28:24,014 | INFO     | --------------------------------------------------
[2025-11-28 14:29:03] 2025-11-28 13:28:24,014 | INFO     | 
[2025-11-28 14:29:03] 2025-11-28 13:28:24,014 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-11-28 14:29:03] 2025-11-28 13:28:24,025 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-28 14:29:03] 2025-11-28 13:28:24,025 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-28 14:29:03] 2025-11-28 13:28:24,025 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-28 14:29:03] 2025-11-28 13:28:24,025 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-28 14:29:03] 2025-11-28 13:28:24,025 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-28 14:29:03] 2025-11-28 13:28:24,025 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-28 14:29:03] 2025-11-28 13:28:24,025 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-28 14:29:03] 2025-11-28 13:28:24,025 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-28 14:29:03] 2025-11-28 13:28:24,025 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-28 14:29:03] 2025-11-28 13:28:24,025 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-28 14:29:03] 2025-11-28 13:28:24,025 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-28 14:29:03] 2025-11-28 13:28:24,025 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-28 14:29:03] 2025-11-28 13:28:24,025 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-28 14:29:03] 2025-11-28 13:28:24,025 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-28 14:29:03] 2025-11-28 13:28:24,025 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-28 14:29:03] 2025-11-28 13:28:24,025 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-28 14:29:03] 2025-11-28 13:28:24,025 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-28 14:29:03] 2025-11-28 13:28:24,026 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-28 14:29:03] 2025-11-28 13:28:24,026 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-28 14:29:03] 2025-11-28 13:28:24,026 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-28 14:29:03] 2025-11-28 13:28:24,026 | INFO     | job 6895358598 has completed (purged errors)
[2025-11-28 14:29:03] 2025-11-28 13:28:24,026 | INFO     | overall cleanup function is called
[2025-11-28 14:29:03] 2025-11-28 13:28:25,032 | INFO     | --- collectZombieJob: --- 10, [1785850]
[2025-11-28 14:29:03] 2025-11-28 13:28:25,033 | INFO     | zombie collector waiting for pid 1785850
[2025-11-28 14:29:03] 2025-11-28 13:28:25,033 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-28 14:29:03] 2025-11-28 13:28:25,062 | INFO     | collected zombie processes
[2025-11-28 14:29:03] 2025-11-28 13:28:25,062 | INFO     | will attempt to kill all subprocesses of pid=1785850
[2025-11-28 14:29:03] 2025-11-28 13:28:25,137 | INFO     | process IDs to be killed: [1785850] (in reverse order)
[2025-11-28 14:29:03] 2025-11-28 13:28:25,158 | WARNING  | found no corresponding commands to process id(s)
[2025-11-28 14:29:03] 2025-11-28 13:28:25,159 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-28 14:29:03] 2025-11-28 13:28:25,161 | INFO     | did not find any defunct processes belonging to 1785850
[2025-11-28 14:29:03] 2025-11-28 13:28:25,164 | INFO     | did not find any defunct processes belonging to 1785850
[2025-11-28 14:29:03] 2025-11-28 13:28:25,164 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-28 14:29:03] 2025-11-28 13:28:25,164 | INFO     | ready for new job
[2025-11-28 14:29:03] 2025-11-28 13:28:25,164 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-28 14:29:03] 2025-11-28 13:28:25,165 | INFO     | ***************************************
[2025-11-28 14:29:03] 2025-11-28 13:28:25,166 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-28 14:29:03] 2025-11-28 13:28:25,166 | INFO     | ***************************************
[2025-11-28 14:29:03] 2025-11-28 13:28:25,166 | INFO     | 
[2025-11-28 14:29:03] 2025-11-28 13:28:25,166 | INFO     | architecture information:
[2025-11-28 14:29:03] 2025-11-28 13:28:25,166 | INFO     | executing command: cat /etc/os-release
[2025-11-28 14:29:03] 2025-11-28 13:28:25,175 | INFO     | cat /etc/os-release:
[2025-11-28 14:29:03] NAME="CentOS Linux"
[2025-11-28 14:29:03] VERSION="7 (Core)"
[2025-11-28 14:29:03] ID="centos"
[2025-11-28 14:29:03] ID_LIKE="rhel fedora"
[2025-11-28 14:29:03] VERSION_ID="7"
[2025-11-28 14:29:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-28 14:29:03] ANSI_COLOR="0;31"
[2025-11-28 14:29:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-28 14:29:03] HOME_URL="https://www.centos.org/"
[2025-11-28 14:29:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-28 14:29:03] 
[2025-11-28 14:29:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-28 14:29:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-28 14:29:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-28 14:29:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-28 14:29:03] 
[2025-11-28 14:29:03] 2025-11-28 13:28:25,175 | INFO     | ***************************************
[2025-11-28 14:29:03] 2025-11-28 13:28:25,678 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-28 14:29:03] 2025-11-28 13:28:25,691 | INFO     | sufficient remaining disk space (488053407744 B)
[2025-11-28 14:29:03] 2025-11-28 13:28:25,691 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-28 14:29:03] 2025-11-28 13:28:25,691 | INFO     | current server update state: UPDATING_FINAL
[2025-11-28 14:29:03] 2025-11-28 13:28:25,691 | INFO     | update_server=False
[2025-11-28 14:29:03] 2025-11-28 13:28:25,691 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-28 14:29:03] 2025-11-28 13:28:25,691 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-28 14:29:03] 2025-11-28 13:28:25,691 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-28 14:29:03] 2025-11-28 13:28:25,691 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-28 14:29:03] 2025-11-28 13:28:25,692 | INFO     | aborting loop
[2025-11-28 14:29:03] 2025-11-28 13:28:26,175 | INFO     | all data control threads have been joined
[2025-11-28 14:29:03] 2025-11-28 13:28:26,696 | INFO     | [job] queue monitor thread has finished
[2025-11-28 14:29:03] 2025-11-28 13:28:26,697 | INFO     | [job] job monitor thread has finished
[2025-11-28 14:29:03] 2025-11-28 13:28:26,698 | INFO     | [job] retrieve thread has finished
[2025-11-28 14:29:03] 2025-11-28 13:28:26,778 | INFO     | all payload control threads have been joined
[2025-11-28 14:29:03] 2025-11-28 13:28:27,000 | INFO     | all job control threads have been joined
[2025-11-28 14:29:03] 2025-11-28 13:28:27,181 | INFO     | [data] control thread has finished
[2025-11-28 14:29:03] 2025-11-28 13:28:27,277 | INFO     | [payload] failed_post thread has finished
[2025-11-28 14:29:03] 2025-11-28 13:28:27,418 | INFO     | [data] copytool_in thread has finished
[2025-11-28 14:29:03] 2025-11-28 13:28:27,423 | INFO     | [job] create_data_payload thread has finished
[2025-11-28 14:29:03] 2025-11-28 13:28:27,436 | INFO     | [payload] execute_payloads thread has finished
[2025-11-28 14:29:03] 2025-11-28 13:28:27,484 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-28 14:29:03] 2025-11-28 13:28:27,504 | INFO     | [job] validate thread has finished
[2025-11-28 14:29:03] 2025-11-28 13:28:27,697 | INFO     | [data] copytool_out thread has finished
[2025-11-28 14:29:03] 2025-11-28 13:28:27,783 | INFO     | [payload] control thread has finished
[2025-11-28 14:29:03] 2025-11-28 13:28:27,946 | INFO     | [payload] validate_pre thread has finished
[2025-11-28 14:29:03] 2025-11-28 13:28:28,006 | INFO     | [job] control thread has finished
[2025-11-28 14:29:03] 2025-11-28 13:28:28,171 | INFO     | [payload] validate_post thread has finished
[2025-11-28 14:29:03] 2025-11-28 13:28:31,492 | INFO     | [data] queue_monitor thread has finished
[2025-11-28 14:29:03] 2025-11-28 13:28:36,587 | INFO     | job.realtimelogging is not enabled
[2025-11-28 14:29:03] 2025-11-28 13:28:37,589 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-28 14:29:03] 2025-11-28 13:28:56,205 | INFO     | PID=1779429 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-28 14:29:03] 2025-11-28 13:28:56,206 | INFO     | found 0 job(s) in 20 queues
[2025-11-28 14:29:03] 2025-11-28 13:28:56,206 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-28 14:29:03] 2025-11-28 13:28:56,206 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-28 14:29:03] 2025-11-28 13:28:56,373 | INFO     | [monitor] cgroup control has ended
[2025-11-28 14:29:03] 2025-11-28 13:28:57,257 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140113321985856)>', '<ExcThread(monitor, started 140112822261504)>']
[2025-11-28 14:29:03] 2025-11-28 13:28:58,216 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-28 14:29:03] 2025-11-28 13:28:58,217 | INFO     | [monitor] control thread has ended
[2025-11-28 14:29:03] 2025-11-28 13:29:02,263 | INFO     | all workflow threads have been joined
[2025-11-28 14:29:03] 2025-11-28 13:29:02,265 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-28 14:29:03] 2025-11-28 13:29:02,265 | INFO     | traces error code: 0
[2025-11-28 14:29:03] 2025-11-28 13:29:02,266 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-28 14:29:03] 2025-11-28 13:29:02,308 [wrapper] ==== pilot stdout END ====
[2025-11-28 14:29:03] 2025-11-28 13:29:02,310 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-28 14:29:03] 2025-11-28 13:29:02,313 [wrapper] pilotpid: 1779429
[2025-11-28 14:29:03] 2025-11-28 13:29:02,315 [wrapper] Pilot exit status: 0
[2025-11-28 14:29:03] 2025-11-28 13:29:02,321 [wrapper] pandaids: 6895358598
[2025-11-28 14:29:03] 2025-11-28 13:29:02,333 [wrapper] cleanup supervisor_pilot 1856787 1779430
[2025-11-28 14:29:03] 2025-11-28 13:29:02,335 [wrapper] Test setup, not cleaning
[2025-11-28 14:29:03] 2025-11-28 13:29:02,337 [wrapper] apfmon messages muted
[2025-11-28 14:29:03] 2025-11-28 13:29:02,339 [wrapper] ==== wrapper stdout END ====
[2025-11-28 14:29:03] 2025-11-28 13:29:02,341 [wrapper] ==== wrapper stderr END ====
[2025-11-28 14:29:03]  *** Error codes and diagnostics ***
[2025-11-28 14:29:03]     "exeErrorCode": 0,
[2025-11-28 14:29:03]     "exeErrorDiag": "",
[2025-11-28 14:29:03]     "pilotErrorCode": 0,
[2025-11-28 14:29:03]     "pilotErrorDiag": "",
[2025-11-28 14:29:03]  *** Listing of results directory ***
[2025-11-28 14:29:03] total 1312756
[2025-11-28 14:29:03] -rw-r--r-- 1 boinc boinc    576529 Nov 23 13:50 pilot3.tar.gz
[2025-11-28 14:29:03] -rwx------ 1 boinc boinc     36292 Nov 23 13:56 runpilot2-wrapper.sh
[2025-11-28 14:29:03] -rw-r--r-- 1 boinc boinc      5112 Nov 23 13:56 queuedata.json
[2025-11-28 14:29:03] -rw-r--r-- 1 boinc boinc       100 Nov 28 02:16 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-28 14:29:03] -rwxr-xr-x 1 boinc boinc      7986 Nov 28 02:16 run_atlas
[2025-11-28 14:29:03] -rw-r--r-- 1 boinc boinc       105 Nov 28 02:16 job.xml
[2025-11-28 14:29:03] -rw-r--r-- 2 boinc boinc 407983507 Nov 28 02:16 EVNT.47483658._000737.pool.root.1
[2025-11-28 14:29:03] drwxrwx--x 2 boinc boinc      4096 Nov 28 02:16 shared
[2025-11-28 14:29:03] -rw-r--r-- 2 boinc boinc    590101 Nov 28 02:16 input.tar.gz
[2025-11-28 14:29:03] -rw-r--r-- 2 boinc boinc     15847 Nov 28 02:16 start_atlas.sh
[2025-11-28 14:29:03] -rw-r--r-- 1 boinc boinc         0 Nov 28 02:16 boinc_setup_complete
[2025-11-28 14:29:03] -rw-r--r-- 1 boinc boinc      6205 Nov 28 02:16 init_data.xml
[2025-11-28 14:29:03] -rw-r--r-- 1 boinc boinc         0 Nov 28 02:16 boinc_lockfile
[2025-11-28 14:29:03] -rw-r--r-- 1 boinc boinc      2783 Nov 28 02:16 pandaJob.out
[2025-11-28 14:29:03] -rw------- 1 boinc boinc    991826 Nov 28 02:16 agis_schedconf.cvmfs.json
[2025-11-28 14:29:03] drwx------ 5 boinc boinc      4096 Nov 28 02:16 pilot3
[2025-11-28 14:29:03] -rw-r--r-- 1 boinc boinc       532 Nov 28 14:23 boinc_task_state.xml
[2025-11-28 14:29:03] -rw------- 1 boinc boinc 917605463 Nov 28 14:27 HITS.47556137._007321.pool.root.1
[2025-11-28 14:29:03] -rw------- 1 boinc boinc        95 Nov 28 14:28 pilot_heartbeat.json
[2025-11-28 14:29:03] -rw------- 1 boinc boinc      1022 Nov 28 14:28 memory_monitor_summary.json
[2025-11-28 14:29:03] -rw------- 1 boinc boinc   1516240 Nov 28 14:28 agis_ddmendpoints.agis.ALL.json
[2025-11-28 14:29:03] -rw------- 1 boinc boinc   1217208 Nov 28 14:28 log.47556137._007321.job.log.tgz.1
[2025-11-28 14:29:03] -rw------- 1 boinc boinc      8566 Nov 28 14:28 heartbeat.json
[2025-11-28 14:29:03] -rw-r--r-- 1 boinc boinc        28 Nov 28 14:28 wrapper_checkpoint.txt
[2025-11-28 14:29:03] -rw------- 1 boinc boinc      4824 Nov 28 14:29 pilotlog.txt
[2025-11-28 14:29:03] -rw------- 1 boinc boinc   6161233 Nov 28 14:29 log.47556137._007321.job.log.1
[2025-11-28 14:29:03] -rw------- 1 boinc boinc       353 Nov 28 14:29 output.list
[2025-11-28 14:29:03] -rw-r--r-- 1 boinc boinc       620 Nov 28 14:29 runtime_log
[2025-11-28 14:29:03] -rw------- 1 boinc boinc   7393280 Nov 28 14:29 result.tar.gz
[2025-11-28 14:29:03] -rw-r--r-- 1 boinc boinc      8192 Nov 28 14:29 boinc_mmap_file
[2025-11-28 14:29:03] -rw-r--r-- 1 boinc boinc      8898 Nov 28 14:29 runtime_log.err
[2025-11-28 14:29:03] -rw------- 1 boinc boinc       665 Nov 28 14:29 Z2vMDmooOh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmMuKKDmm2i8Lo.diag
[2025-11-28 14:29:03] -rw-r--r-- 1 boinc boinc     21232 Nov 28 14:29 stderr.txt
[2025-11-28 14:29:03] HITS file was successfully produced:
[2025-11-28 14:29:03] -rw------- 1 boinc boinc 917605463 Nov 28 14:27 shared/HITS.pool.root.1
[2025-11-28 14:29:03]  *** Contents of shared directory: ***
[2025-11-28 14:29:03] total 1302348
[2025-11-28 14:29:03] -rw-r--r-- 2 boinc boinc 407983507 Nov 28 02:16 ATLAS.root_0
[2025-11-28 14:29:03] -rw-r--r-- 2 boinc boinc    590101 Nov 28 02:16 input.tar.gz
[2025-11-28 14:29:03] -rw-r--r-- 2 boinc boinc     15847 Nov 28 02:16 start_atlas.sh
[2025-11-28 14:29:03] -rw------- 1 boinc boinc 917605463 Nov 28 14:27 HITS.pool.root.1
[2025-11-28 14:29:03] -rw------- 1 boinc boinc   7393280 Nov 28 14:29 result.tar.gz
14:29:04 (1775717): run_atlas exited; CPU time 86909.402960
14:29:04 (1775717): called boinc_finish(0)

</stderr_txt>
]]>

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