Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:27:50 (1836885): wrapper (7.7.26015): starting
00:27:50 (1836885): wrapper: running run_atlas (--nthreads 12)
[2025-11-24 00:27:50] Arguments: --nthreads 12
[2025-11-24 00:27:50] Threads: 12
[2025-11-24 00:27:50] Checking for CVMFS
[2025-11-24 00:27:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 00:27:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 00:27:52] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 00:27:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 00:27:52] 2.11.5.0 4091557 24978 189968 153239 2 111 28776503 45568000 17486 130560 0 192855615 99.755 137049515 22948 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-11-24 00:27:52] CVMFS is ok
[2025-11-24 00:27:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 00:27:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 00:27:52] Further information can be found at the LHC@home message board.
[2025-11-24 00:27:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 00:27:52] Checking for apptainer binary...
[2025-11-24 00:27:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 00:27:52] Running /usr/bin/apptainer --version
[2025-11-24 00:27:52] apptainer version 1.4.1-1.el9
[2025-11-24 00:27:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 00:27:53] wns0073.triumf.lcg
[2025-11-24 00:27:53] apptainer works
[2025-11-24 00:27:53] Set ATHENA_PROC_NUMBER=12
[2025-11-24 00:27:53] Set ATHENA_CORE_NUMBER=12
[2025-11-24 00:27:53] Starting ATLAS job with PandaID=6895371772
[2025-11-24 00:27:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 00:37:57]  *** The last 200 lines of the pilot log: ***
[2025-11-24 00:37:57] 2025-11-24 08:36:58,359 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-24 00:37:57] 2025-11-24 08:36:58,360 | WARNING  | wrong length of table data, x=[1763973069.0, 1763973130.0, 1763973191.0, 1763973252.0], y=[3150.0, 503620.0, 372208.0, 823646.0] (must be same and length>=4)
[2025-11-24 00:37:57] 2025-11-24 08:36:58,360 | INFO     | could have reported an average CPU frequency of 1297 MHz (4 samples)
[2025-11-24 00:37:57] 2025-11-24 08:36:58,361 | INFO     | ..............................
[2025-11-24 00:37:57] 2025-11-24 08:36:58,361 | INFO     | . Timing measurements:
[2025-11-24 00:37:57] 2025-11-24 08:36:58,361 | INFO     | . get job = 0 s
[2025-11-24 00:37:57] 2025-11-24 08:36:58,361 | INFO     | . initial setup = 3 s
[2025-11-24 00:37:57] 2025-11-24 08:36:58,361 | INFO     | . payload setup = 32 s
[2025-11-24 00:37:57] 2025-11-24 08:36:58,361 | INFO     | . stage-in = 0 s
[2025-11-24 00:37:57] 2025-11-24 08:36:58,361 | INFO     | . payload execution = 234 s
[2025-11-24 00:37:57] 2025-11-24 08:36:58,361 | INFO     | . stage-out = 1 s
[2025-11-24 00:37:57] 2025-11-24 08:36:58,361 | INFO     | . log creation = 0 s
[2025-11-24 00:37:57] 2025-11-24 08:36:58,362 | INFO     | ..............................
[2025-11-24 00:37:57] 2025-11-24 08:36:58,362 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-24 00:37:57] 2025-11-24 08:36:58,362 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6895371772/pilotlog.txt
[2025-11-24 00:37:57] 2025-11-24 08:36:58,383 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-11-24 00:37:57] - Log from pilotlog.txt -
[2025-11-24 00:37:57] 2025-11-24 08:36:58,357 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6895371772/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 00:37:57] 2025-11-24 08:36:58,358 | INFO     | extracted standard info from prmon json
[2025-11-24 00:37:57] 2025-11-24 08:36:58,358 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 00:37:57] 2025-11-24 08:36:58,358 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 00:37:57] 2025-11-24 08:36:58,359 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-24 00:37:57] 2025-11-24 08:36:58,359 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-24 00:37:57] 2025-11-24 08:36:58,360 | WARNING  | wrong length of table data, x=[1763973069.0, 1763973130.0, 1763973191.0, 1763973252.0], y=[3150.0, 503620.0, 372208.0, 823646.0] (must be same and length>=4)
[2025-11-24 00:37:57] 2025-11-24 08:36:58,360 | INFO     | could have reported an average CPU frequency of 1297 MHz (4 samples)
[2025-11-24 00:37:57] 2025-11-24 08:36:58,361 | INFO     | ..............................
[2025-11-24 00:37:57] 2025-11-24 08:36:58,361 | INFO     | . Timing measurements:
[2025-11-24 00:37:57] 2025-11-24 08:36:58,361 | INFO     | . get job = 0 s
[2025-11-24 00:37:57] 2025-11-24 08:36:58,361 | INFO     | . initial setup = 3 s
[2025-11-24 00:37:57] 2025-11-24 08:36:58,361 | INFO     | . payload setup = 32 s
[2025-11-24 00:37:57] 2025-11-24 08:36:58,361 | INFO     | . stage-in = 0 s
[2025-11-24 00:37:57] 2025-11-24 08:36:58,361 | INFO     | . payload execution = 234 s
[2025-11-24 00:37:57] 2025-11-24 08:36:58,361 | INFO     | . stage-out = 1 s
[2025-11-24 00:37:57] 2025-11-24 08:36:58,361 | INFO     | . log creation = 0 s
[2025-11-24 00:37:57] 2025-11-24 08:36:58,362 | INFO     | ..............................
[2025-11-24 00:37:57] 2025-11-24 08:36:58,362 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-24 00:37:57] 2025-11-24 08:36:58,362 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6895371772/pilotlog.txt
[2025-11-24 00:37:57] 2025-11-24 08:36:58,384 | WARNING  | 
[2025-11-24 00:37:57] [begin log extracts]
[2025-11-24 00:37:57] - Log from pilotlog.txt -
[2025-11-24 00:37:57] 2025-11-24 08:36:58,357 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6895371772/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 00:37:57] 2025-11-24 08:36:58,358 | INFO     | extracted standard info from prmon json
[2025-11-24 00:37:57] 2025-11-24 08:36:58,358 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 00:37:57] 2025-11-24 08:36:58,358 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 00:37:57] 2025-11-24 08:36:58,359 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-24 00:37:57] 2025-11-24 08:36:58,359 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-24 00:37:57] 2025-11-24 08:36:58,360 | WARNING  | wrong length of table data, x=[1763973069.0, 1763973130.0, 1763973191.0, 1763973252.0], y=[3150.0, 503620.0, 372208.0, 823646.0] (must be same and length>=4)
[2025-11-24 00:37:57] 2025-11-24 08:36:58,360 | INFO     | could have reported an average CPU frequency of 1297 MHz (4 samples)
[2025-11-24 00:37:57] 2025-11-24 08:36:58,361 | INFO     | ..............................
[2025-11-24 00:37:57] 2025-11-24 08:36:58,361 | INFO     | . Timing measurements:
[2025-11-24 00:37:57] 2025-11-24 08:36:58,361 | INFO     | . get job = 0 s
[2025-11-24 00:37:57] 2025-11-24 08:36:58,361 | INFO     | . initial setup = 3 s
[2025-11-24 00:37:57] 2025-11-24 08:36:58,361 | INFO     | . payload setup = 32 s
[2025-11-24 00:37:57] 2025-11-24 08:36:58,361 | INFO     | . stage-in = 0 s
[2025-11-24 00:37:57] 2025-11-24 08:36:58,361 | INFO     | . payload execution = 234 s
[2025-11-24 00:37:57] 2025-11-24 08:36:58,361 | INFO     | . stage-out = 1 s
[2025-11-24 00:37:57] 2025-11-24 08:36:58,361 | INFO     | . log creation = 0 s
[2025-11-24 00:37:57] 2025-11-24 08:36:58,362 | INFO     | ..............................
[2025-11-24 00:37:57] 2025-11-24 08:36:58,362 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-24 00:37:57] 2025-11-24 08:36:58,362 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6895371772/pilotlog.txt
[2025-11-24 00:37:57] [end log extracts]
[2025-11-24 00:37:57] 2025-11-24 08:36:58,384 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2025-11-24 00:37:57] 2025-11-24 08:36:58,385 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-11-24 00:37:57] 2025-11-24 08:36:58,724 | INFO     | 
[2025-11-24 00:37:57] 2025-11-24 08:36:58,724 | INFO     | job summary report
[2025-11-24 00:37:57] 2025-11-24 08:36:58,724 | INFO     | --------------------------------------------------
[2025-11-24 00:37:57] 2025-11-24 08:36:58,724 | INFO     | PanDA job id: 6895371772
[2025-11-24 00:37:57] 2025-11-24 08:36:58,725 | INFO     | task id: 47556137
[2025-11-24 00:37:57] 2025-11-24 08:36:58,725 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-11-24 00:34:15,479 CRITICAL Transform executor raised TransformValidationExceptio
[2025-11-24 00:37:57] 2025-11-24 08:36:58,725 | INFO     | error 2/2: 1165: Local output file is missing
[2025-11-24 00:37:57] 2025-11-24 08:36:58,725 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 00:37:57] 2025-11-24 08:36:58,725 | INFO     | pilot state: failed 
[2025-11-24 00:37:57] 2025-11-24 08:36:58,725 | INFO     | transexitcode: 65
[2025-11-24 00:37:57] 2025-11-24 08:36:58,725 | INFO     | exeerrorcode: 65
[2025-11-24 00:37:57] 2025-11-24 08:36:58,725 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFL
[2025-11-24 00:37:57] 2025-11-24 08:36:58,725 | INFO     | exitcode: 65
[2025-11-24 00:37:57] 2025-11-24 08:36:58,725 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 
[2025-11-24 00:37:57] 2025-11-24 08:36:58,726 | INFO     | cpuconsumptiontime: 81 s
[2025-11-24 00:37:57] 2025-11-24 08:36:58,726 | INFO     | nevents: 0
[2025-11-24 00:37:57] 2025-11-24 08:36:58,726 | INFO     | neventsw: 0
[2025-11-24 00:37:57] 2025-11-24 08:36:58,726 | INFO     | pid: 1848568
[2025-11-24 00:37:57] 2025-11-24 08:36:58,726 | INFO     | pgrp: 1848568
[2025-11-24 00:37:57] 2025-11-24 08:36:58,726 | INFO     | corecount: 12
[2025-11-24 00:37:57] 2025-11-24 08:36:58,726 | INFO     | event service: False
[2025-11-24 00:37:57] 2025-11-24 08:36:58,726 | INFO     | sizes: {0: 2298576, 1: 2298632, 2: 2298688, 3: 2298887, 4: 2298887, 16: 2298915, 27: 2299071, 36: 2299361, 38: 2299389, 271: 2324866, 272: 2324870, 274: 2329552, 4
[2025-11-24 00:37:57] 2025-11-24 08:36:58,726 | INFO     | --------------------------------------------------
[2025-11-24 00:37:57] 2025-11-24 08:36:58,726 | INFO     | 
[2025-11-24 00:37:57] 2025-11-24 08:36:58,727 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-11-24 00:37:57] 2025-11-24 08:36:58,837 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 00:37:57] 2025-11-24 08:36:58,837 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 00:37:57] 2025-11-24 08:36:58,837 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 00:37:57] 2025-11-24 08:36:58,837 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 00:37:57] 2025-11-24 08:36:58,837 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 00:37:57] 2025-11-24 08:36:58,837 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 00:37:57] 2025-11-24 08:36:58,838 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 00:37:57] 2025-11-24 08:36:58,838 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 00:37:57] 2025-11-24 08:36:58,838 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 00:37:57] 2025-11-24 08:36:58,838 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 00:37:57] 2025-11-24 08:36:58,838 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 00:37:57] 2025-11-24 08:36:58,838 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 00:37:57] 2025-11-24 08:36:58,838 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 00:37:57] 2025-11-24 08:36:58,838 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 00:37:57] 2025-11-24 08:36:58,838 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 00:37:57] 2025-11-24 08:36:58,838 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 00:37:57] 2025-11-24 08:36:58,839 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 00:37:57] 2025-11-24 08:36:58,839 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 00:37:57] 2025-11-24 08:36:58,839 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 00:37:57] 2025-11-24 08:36:58,839 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 00:37:57] 2025-11-24 08:36:58,839 | INFO     | job 6895371772 has completed (purged errors)
[2025-11-24 00:37:57] 2025-11-24 08:36:58,839 | INFO     | overall cleanup function is called
[2025-11-24 00:37:57] 2025-11-24 08:36:59,878 | INFO     | --- collectZombieJob: --- 10, [1848568]
[2025-11-24 00:37:57] 2025-11-24 08:36:59,878 | INFO     | zombie collector waiting for pid 1848568
[2025-11-24 00:37:57] 2025-11-24 08:36:59,878 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 00:37:57] 2025-11-24 08:36:59,878 | INFO     | collected zombie processes
[2025-11-24 00:37:57] 2025-11-24 08:36:59,879 | INFO     | will attempt to kill all subprocesses of pid=1848568
[2025-11-24 00:37:57] 2025-11-24 08:37:00,392 | INFO     | process IDs to be killed: [1848568] (in reverse order)
[2025-11-24 00:37:57] 2025-11-24 08:37:00,515 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 00:37:57] 2025-11-24 08:37:00,515 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 00:37:57] 2025-11-24 08:37:00,578 | INFO     | did not find any defunct processes belonging to 1848568
[2025-11-24 00:37:57] 2025-11-24 08:37:00,640 | INFO     | did not find any defunct processes belonging to 1848568
[2025-11-24 00:37:57] 2025-11-24 08:37:00,642 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 00:37:57] 2025-11-24 08:37:00,643 | INFO     | ready for new job
[2025-11-24 00:37:57] 2025-11-24 08:37:00,643 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 00:37:57] 2025-11-24 08:37:00,676 | INFO     | ***************************************
[2025-11-24 00:37:57] 2025-11-24 08:37:00,676 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 00:37:57] 2025-11-24 08:37:00,676 | INFO     | ***************************************
[2025-11-24 00:37:57] 2025-11-24 08:37:00,676 | INFO     | 
[2025-11-24 00:37:57] 2025-11-24 08:37:00,688 | INFO     | architecture information:
[2025-11-24 00:37:57] 2025-11-24 08:37:00,702 | INFO     | executing command: cat /etc/os-release
[2025-11-24 00:37:57] 2025-11-24 08:37:00,795 | INFO     | cat /etc/os-release:
[2025-11-24 00:37:57] NAME="CentOS Linux"
[2025-11-24 00:37:57] VERSION="7 (Core)"
[2025-11-24 00:37:57] ID="centos"
[2025-11-24 00:37:57] ID_LIKE="rhel fedora"
[2025-11-24 00:37:57] VERSION_ID="7"
[2025-11-24 00:37:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 00:37:57] ANSI_COLOR="0;31"
[2025-11-24 00:37:57] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 00:37:57] HOME_URL="https://www.centos.org/"
[2025-11-24 00:37:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 00:37:57] 
[2025-11-24 00:37:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 00:37:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 00:37:57] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 00:37:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 00:37:57] 
[2025-11-24 00:37:57] 2025-11-24 08:37:00,796 | INFO     | ***************************************
[2025-11-24 00:37:57] 2025-11-24 08:37:01,301 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-11-24 00:37:57] 2025-11-24 08:37:01,321 | INFO     | sufficient remaining disk space (659220856832 B)
[2025-11-24 00:37:57] 2025-11-24 08:37:01,321 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 00:37:57] 2025-11-24 08:37:01,322 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 00:37:57] 2025-11-24 08:37:01,322 | INFO     | update_server=False
[2025-11-24 00:37:57] 2025-11-24 08:37:01,322 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 00:37:57] 2025-11-24 08:37:01,322 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 00:37:57] 2025-11-24 08:37:01,322 | INFO     | aborting loop
[2025-11-24 00:37:57] 2025-11-24 08:37:01,323 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 00:37:57] 2025-11-24 08:37:01,809 | INFO     | all data control threads have been joined
[2025-11-24 00:37:57] 2025-11-24 08:37:02,335 | INFO     | [job] retrieve thread has finished
[2025-11-24 00:37:57] 2025-11-24 08:37:02,335 | INFO     | [job] job monitor thread has finished
[2025-11-24 00:37:57] 2025-11-24 08:37:02,744 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 00:37:57] 2025-11-24 08:37:02,757 | INFO     | all payload control threads have been joined
[2025-11-24 00:37:57] 2025-11-24 08:37:02,815 | INFO     | [data] control thread has finished
[2025-11-24 00:37:57] 2025-11-24 08:37:02,991 | INFO     | all job control threads have been joined
[2025-11-24 00:37:57] 2025-11-24 08:37:03,029 | INFO     | [payload] failed_post thread has finished
[2025-11-24 00:37:57] 2025-11-24 08:37:03,056 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 00:37:57] 2025-11-24 08:37:03,102 | INFO     | [payload] validate_post thread has finished
[2025-11-24 00:37:57] 2025-11-24 08:37:03,204 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 00:37:57] 2025-11-24 08:37:03,330 | INFO     | [data] copytool_out thread has finished
[2025-11-24 00:37:57] 2025-11-24 08:37:03,510 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 00:37:57] 2025-11-24 08:37:03,590 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 00:37:57] 2025-11-24 08:37:03,633 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 00:37:57] 2025-11-24 08:37:03,763 | INFO     | [payload] control thread has finished
[2025-11-24 00:37:57] 2025-11-24 08:37:03,782 | INFO     | [data] copytool_in thread has finished
[2025-11-24 00:37:57] 2025-11-24 08:37:03,783 | INFO     | [job] validate thread has finished
[2025-11-24 00:37:57] 2025-11-24 08:37:03,997 | INFO     | [job] control thread has finished
[2025-11-24 00:37:57] 2025-11-24 08:37:04,596 | INFO     | [job] queue monitor thread has finished
[2025-11-24 00:37:57] 2025-11-24 08:37:07,066 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 00:37:57] 2025-11-24 08:37:31,425 | INFO     | PID=1841545 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-24 00:37:57] 2025-11-24 08:37:31,425 | INFO     | .. there are 28 such processes running
[2025-11-24 00:37:57] 2025-11-24 08:37:31,426 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 00:37:57] 2025-11-24 08:37:31,426 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 00:37:57] 2025-11-24 08:37:31,426 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 00:37:57] 2025-11-24 08:37:50,587 | INFO     | [monitor] cgroup control has ended
[2025-11-24 00:37:57] 2025-11-24 08:37:50,664 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139981206357824)>', '<ExcThread(monitor, started 139980785555200)>']
[2025-11-24 00:37:57] 2025-11-24 08:37:51,562 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 00:37:57] 2025-11-24 08:37:51,562 | INFO     | [monitor] control thread has ended
[2025-11-24 00:37:57] 2025-11-24 08:37:55,690 | INFO     | all workflow threads have been joined
[2025-11-24 00:37:57] 2025-11-24 08:37:55,690 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 00:37:57] 2025-11-24 08:37:55,691 | INFO     | traces error code: 0
[2025-11-24 00:37:57] 2025-11-24 08:37:55,691 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 00:37:57] 2025-11-24 08:37:55,907 [wrapper] ==== pilot stdout END ====
[2025-11-24 00:37:57] 2025-11-24 08:37:55,910 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 00:37:57] 2025-11-24 08:37:55,913 [wrapper] pilotpid: 1841545
[2025-11-24 00:37:57] 2025-11-24 08:37:55,917 [wrapper] Pilot exit status: 0
[2025-11-24 00:37:57] 2025-11-24 08:37:56,103 [wrapper] pandaids: 6895371772
[2025-11-24 00:37:57] 2025-11-24 08:37:56,918 [wrapper] cleanup supervisor_pilot 1841551 1841546
[2025-11-24 00:37:57] 2025-11-24 08:37:56,954 [wrapper] Test setup, not cleaning
[2025-11-24 00:37:57] 2025-11-24 08:37:56,987 [wrapper] apfmon messages muted
[2025-11-24 00:37:57] 2025-11-24 08:37:57,050 [wrapper] ==== wrapper stdout END ====
[2025-11-24 00:37:57] 2025-11-24 08:37:57,066 [wrapper] ==== wrapper stderr END ====
[2025-11-24 00:37:57]  *** Error codes and diagnostics ***
[2025-11-24 00:37:57]     "exeErrorCode": 65,
[2025-11-24 00:37:57]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 cannot be opened - STOP\"",
[2025-11-24 00:37:57]     "pilotErrorCode": 1305,
[2025-11-24 00:37:57]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 canno",
[2025-11-24 00:37:57]  *** Listing of results directory ***
[2025-11-24 00:37:57] total 404108
[2025-11-24 00:37:57] -rw-r--r--. 1 boinc boinc    576529 Nov 23 13:23 pilot3.tar.gz
[2025-11-24 00:37:57] -rwx------. 1 boinc boinc     36292 Nov 23 13:43 runpilot2-wrapper.sh
[2025-11-24 00:37:57] -rw-r--r--. 1 boinc boinc      5112 Nov 23 13:43 queuedata.json
[2025-11-24 00:37:57] -rw-r--r--. 1 boinc boinc       100 Nov 24 00:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 00:37:57] -rwxr-xr-x. 1 boinc boinc      7986 Nov 24 00:27 run_atlas
[2025-11-24 00:37:57] -rw-r--r--. 1 boinc boinc       105 Nov 24 00:27 job.xml
[2025-11-24 00:37:57] -rw-r--r--. 2 boinc boinc 409539514 Nov 24 00:27 EVNT.47483658._000903.pool.root.1
[2025-11-24 00:37:57] -rw-r--r--. 1 boinc boinc      6593 Nov 24 00:27 init_data.xml
[2025-11-24 00:37:57] drwxrwx--x. 2 boinc boinc      4096 Nov 24 00:27 shared
[2025-11-24 00:37:57] -rw-r--r--. 2 boinc boinc    590100 Nov 24 00:27 input.tar.gz
[2025-11-24 00:37:57] -rw-r--r--. 2 boinc boinc     15847 Nov 24 00:27 start_atlas.sh
[2025-11-24 00:37:57] -rw-r--r--. 1 boinc boinc         0 Nov 24 00:27 boinc_lockfile
[2025-11-24 00:37:57] -rw-r--r--. 1 boinc boinc      2785 Nov 24 00:27 pandaJob.out
[2025-11-24 00:37:57] -rw-------. 1 boinc boinc    989794 Nov 24 00:28 agis_schedconf.cvmfs.json
[2025-11-24 00:37:57] -rw-------. 1 boinc boinc   1526164 Nov 24 00:28 agis_ddmendpoints.agis.ALL.json
[2025-11-24 00:37:57] drwx------. 5 boinc boinc      4096 Nov 24 00:28 pilot3
[2025-11-24 00:37:57] -rw-------. 1 boinc boinc      1000 Nov 24 00:34 memory_monitor_summary.json
[2025-11-24 00:37:57] -rw-------. 1 boinc boinc     51255 Nov 24 00:34 log.47556137._008896.job.log.tgz.1
[2025-11-24 00:37:57] -rw-r--r--. 1 boinc boinc       525 Nov 24 00:34 boinc_task_state.xml
[2025-11-24 00:37:57] -rw-------. 1 boinc boinc     10338 Nov 24 00:36 heartbeat.json
[2025-11-24 00:37:57] -rw-------. 1 boinc boinc        95 Nov 24 00:37 pilot_heartbeat.json
[2025-11-24 00:37:57] -rw-r--r--. 1 boinc boinc        23 Nov 24 00:37 wrapper_checkpoint.txt
[2025-11-24 00:37:57] -rw-r--r--. 1 boinc boinc      8192 Nov 24 00:37 boinc_mmap_file
[2025-11-24 00:37:57] -rw-------. 1 boinc boinc      4822 Nov 24 00:37 pilotlog.txt
[2025-11-24 00:37:57] -rw-------. 1 boinc boinc    122571 Nov 24 00:37 log.47556137._008896.job.log.1
[2025-11-24 00:37:57] -rw-------. 1 boinc boinc       186 Nov 24 00:37 output.list
[2025-11-24 00:37:57] -rw-r--r--. 1 boinc boinc       620 Nov 24 00:37 runtime_log
[2025-11-24 00:37:57] -rw-------. 1 boinc boinc    194560 Nov 24 00:37 result.tar.gz
[2025-11-24 00:37:57] -rw-r--r--. 1 boinc boinc      8636 Nov 24 00:37 runtime_log.err
[2025-11-24 00:37:57] -rw-------. 1 boinc boinc       644 Nov 24 00:37 HgQLDmo2Wh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmnlIKDm1X8UBn.diag
[2025-11-24 00:37:57] -rw-r--r--. 1 boinc boinc     22681 Nov 24 00:37 stderr.txt
[2025-11-24 00:37:57] No HITS result produced
[2025-11-24 00:37:57]  *** Contents of shared directory: ***
[2025-11-24 00:37:57] total 400736
[2025-11-24 00:37:57] -rw-r--r--. 2 boinc boinc 409539514 Nov 24 00:27 ATLAS.root_0
[2025-11-24 00:37:57] -rw-r--r--. 2 boinc boinc    590100 Nov 24 00:27 input.tar.gz
[2025-11-24 00:37:57] -rw-r--r--. 2 boinc boinc     15847 Nov 24 00:27 start_atlas.sh
[2025-11-24 00:37:57] -rw-------. 1 boinc boinc    194560 Nov 24 00:37 result.tar.gz
00:37:59 (1836885): run_atlas exited; CPU time 87.012727
00:37:59 (1836885): called boinc_finish(0)

</stderr_txt>
]]>

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