Stderr output

<core_client_version>7.24.5</core_client_version>
<![CDATA[
<stderr_txt>
00:49:37 (1105666): wrapper (7.7.26015): starting
00:49:37 (1105666): wrapper: running run_atlas (--nthreads 4)
[2025-11-24 08:20:56] Arguments: --nthreads 4
[2025-11-24 08:20:56] Threads: 4
[2025-11-24 08:20:56] Checking for CVMFS
[2025-11-24 08:20:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 08:20:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 08:20:56] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 08:20:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 08:20:56] 2.13.2.0 213864 911 54340 153238 1 90 4065722 4096001 4837 130560 0 2774059 99.816 321493 875 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-11-24 08:20:56] CVMFS is ok
[2025-11-24 08:20:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 08:20:56] Small home clusters do not require a local http proxy but it is suggested if
[2025-11-24 08:20:56] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-11-24 08:20:56] Further information can be found at the LHC@home message board.
[2025-11-24 08:20:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 08:20:56] Checking for apptainer binary...
[2025-11-24 08:20:56] apptainer is not installed, using version from CVMFS
[2025-11-24 08:20:56] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 08:20:56] X670EPG
[2025-11-24 08:20:56] apptainer works
[2025-11-24 08:20:56] Set ATHENA_PROC_NUMBER=4
[2025-11-24 08:20:56] Set ATHENA_CORE_NUMBER=4
[2025-11-24 08:20:56] Starting ATLAS job with PandaID=6895358584
[2025-11-24 08:20:56] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 08:20:56]  *** The last 200 lines of the pilot log: ***
[2025-11-24 08:20:56] 2025-11-24 15:20:23,497 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-24 08:20:56] 2025-11-24 15:20:23,499 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 4631.5419375
[2025-11-24 08:20:56] 2025-11-24 15:20:23,502 | INFO     | using path: /var/lib/boinc-client/slots/6/PanDA_Pilot-6895358584/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 08:20:56] 2025-11-24 15:20:23,502 | INFO     | extracted standard info from prmon json
[2025-11-24 08:20:56] 2025-11-24 15:20:23,502 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 08:20:56] 2025-11-24 15:20:23,502 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 08:20:56] 2025-11-24 15:20:23,505 | INFO     | fitting pss+swap vs Time
[2025-11-24 08:20:56] 2025-11-24 15:20:23,506 | INFO     | sum of square deviations: 26957982662.0
[2025-11-24 08:20:56] 2025-11-24 15:20:23,508 | INFO     | sum of deviations: 189644573169.00003
[2025-11-24 08:20:56] 2025-11-24 15:20:23,508 | INFO     | mean x: 1763984084.0
[2025-11-24 08:20:56] 2025-11-24 15:20:23,508 | INFO     | mean y: 2250364.695259594
[2025-11-24 08:20:56] 2025-11-24 15:20:23,508 | INFO     | intersect: -12407061299.36495
[2025-11-24 08:20:56] 2025-11-24 15:20:23,508 | INFO     | chi2: 2.9725399234135517
[2025-11-24 08:20:56] 2025-11-24 15:20:23,508 | INFO     | sum of square deviations: 26055444809.5
[2025-11-24 08:20:56] 2025-11-24 15:20:23,510 | INFO     | sum of deviations: 241386122031.5
[2025-11-24 08:20:56] 2025-11-24 15:20:23,510 | INFO     | mean x: 1763983931.5
[2025-11-24 08:20:56] 2025-11-24 15:20:23,510 | INFO     | mean y: 2259054.6187214614
[2025-11-24 08:20:56] 2025-11-24 15:20:23,511 | INFO     | intersect: -16339862281.779034
[2025-11-24 08:20:56] 2025-11-24 15:20:23,511 | INFO     | chi2: 1.665645185837262
[2025-11-24 08:20:56] 2025-11-24 15:20:23,511 | INFO     | current chi2=1.665645185837262 (change=43.965590748920924 %)
[2025-11-24 08:20:56] 2025-11-24 15:20:23,511 | INFO     | sum of square deviations: 25173279432.0
[2025-11-24 08:20:56] 2025-11-24 15:20:23,513 | INFO     | sum of deviations: 236914588859.00003
[2025-11-24 08:20:56] 2025-11-24 15:20:23,513 | INFO     | mean x: 1763983779.0
[2025-11-24 08:20:56] 2025-11-24 15:20:23,513 | INFO     | mean y: 2258281.558891455
[2025-11-24 08:20:56] 2025-11-24 15:20:23,513 | INFO     | intersect: -16599213643.647766
[2025-11-24 08:20:56] 2025-11-24 15:20:23,513 | INFO     | chi2: 1.664201672429193
[2025-11-24 08:20:56] 2025-11-24 15:20:23,513 | INFO     | current chi2=1.664201672429193 (change=0.08666391980375017 %)
[2025-11-24 08:20:56] 2025-11-24 15:20:23,513 | INFO     | right removable region: 432
[2025-11-24 08:20:56] 2025-11-24 15:20:23,514 | INFO     | sum of square deviations: 26055444809.5
[2025-11-24 08:20:56] 2025-11-24 15:20:23,516 | INFO     | sum of deviations: 118296446305.00003
[2025-11-24 08:20:56] 2025-11-24 15:20:23,516 | INFO     | mean x: 1763984236.5
[2025-11-24 08:20:56] 2025-11-24 15:20:23,516 | INFO     | mean y: 2262367.5342465756
[2025-11-24 08:20:56] 2025-11-24 15:20:23,516 | INFO     | intersect: -8006546080.821433
[2025-11-24 08:20:56] 2025-11-24 15:20:23,516 | INFO     | chi2: 1.3647425120119392
[2025-11-24 08:20:56] 2025-11-24 15:20:23,516 | INFO     | current chi2=1.3647425120119392 (change=54.08833700558945 %)
[2025-11-24 08:20:56] 2025-11-24 15:20:23,516 | INFO     | sum of square deviations: 25173279432.0
[2025-11-24 08:20:56] 2025-11-24 15:20:23,518 | INFO     | sum of deviations: 106701652375.99997
[2025-11-24 08:20:56] 2025-11-24 15:20:23,518 | INFO     | mean x: 1763984389.0
[2025-11-24 08:20:56] 2025-11-24 15:20:23,518 | INFO     | mean y: 2264370.755196305
[2025-11-24 08:20:56] 2025-11-24 15:20:23,518 | INFO     | intersect: -7474713334.124423
[2025-11-24 08:20:56] 2025-11-24 15:20:23,519 | INFO     | chi2: 1.3536773025109323
[2025-11-24 08:20:56] 2025-11-24 15:20:23,519 | INFO     | current chi2=1.3536773025109323 (change=0.810791002963207 %)
[2025-11-24 08:20:56] 2025-11-24 15:20:23,519 | INFO     | left removable region: 20
[2025-11-24 08:20:56] 2025-11-24 15:20:23,519 | INFO     | sum of square deviations: 21685403803.0
[2025-11-24 08:20:56] 2025-11-24 15:20:23,521 | INFO     | sum of deviations: 136804075420.99998
[2025-11-24 08:20:56] 2025-11-24 15:20:23,521 | INFO     | mean x: 1763984358.5
[2025-11-24 08:20:56] 2025-11-24 15:20:23,521 | INFO     | mean y: 2275941.849514563
[2025-11-24 08:20:56] 2025-11-24 15:20:23,521 | INFO     | intersect: -11125958118.902151
[2025-11-24 08:20:56] 2025-11-24 15:20:23,521 | INFO     | chi2: 0.027360699767254026
[2025-11-24 08:20:56] 2025-11-24 15:20:23,521 | INFO     | current memory leak: 6.31 B/s (using 412 data points, chi2=0.03)
[2025-11-24 08:20:56] 2025-11-24 15:20:23,521 | INFO     | could have reported an average CPU frequency of 4563 MHz (18 samples)
[2025-11-24 08:20:56] 2025-11-24 15:20:23,521 | INFO     | ..............................
[2025-11-24 08:20:56] 2025-11-24 15:20:23,521 | INFO     | . Timing measurements:
[2025-11-24 08:20:56] 2025-11-24 15:20:23,521 | INFO     | . get job = 0 s
[2025-11-24 08:20:56] 2025-11-24 15:20:23,522 | INFO     | . initial setup = 2 s
[2025-11-24 08:20:56] 2025-11-24 15:20:23,522 | INFO     | . payload setup = 2 s
[2025-11-24 08:20:56] 2025-11-24 15:20:23,522 | INFO     | . stage-in = 0 s
[2025-11-24 08:20:56] 2025-11-24 15:20:23,522 | INFO     | . payload execution = 27011 s
[2025-11-24 08:20:56] 2025-11-24 15:20:23,522 | INFO     | . stage-out = 2 s
[2025-11-24 08:20:56] 2025-11-24 15:20:23,522 | INFO     | . log creation = 0 s
[2025-11-24 08:20:56] 2025-11-24 15:20:23,522 | INFO     | ..............................
[2025-11-24 08:20:56] 2025-11-24 15:20:23,565 | INFO     | 
[2025-11-24 08:20:56] 2025-11-24 15:20:23,565 | INFO     | job summary report
[2025-11-24 08:20:56] 2025-11-24 15:20:23,565 | INFO     | --------------------------------------------------
[2025-11-24 08:20:56] 2025-11-24 15:20:23,565 | INFO     | PanDA job id: 6895358584
[2025-11-24 08:20:56] 2025-11-24 15:20:23,565 | INFO     | task id: 47556137
[2025-11-24 08:20:56] 2025-11-24 15:20:23,565 | INFO     | errors: (none)
[2025-11-24 08:20:56] 2025-11-24 15:20:23,565 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 08:20:56] 2025-11-24 15:20:23,565 | INFO     | pilot state: finished 
[2025-11-24 08:20:56] 2025-11-24 15:20:23,565 | INFO     | transexitcode: 0
[2025-11-24 08:20:56] 2025-11-24 15:20:23,565 | INFO     | exeerrorcode: 0
[2025-11-24 08:20:56] 2025-11-24 15:20:23,565 | INFO     | exeerrordiag: 
[2025-11-24 08:20:56] 2025-11-24 15:20:23,565 | INFO     | exitcode: 0
[2025-11-24 08:20:56] 2025-11-24 15:20:23,565 | INFO     | exitmsg: OK
[2025-11-24 08:20:56] 2025-11-24 15:20:23,565 | INFO     | cpuconsumptiontime: 106992 s
[2025-11-24 08:20:56] 2025-11-24 15:20:23,565 | INFO     | nevents: 1000
[2025-11-24 08:20:56] 2025-11-24 15:20:23,565 | INFO     | neventsw: 0
[2025-11-24 08:20:56] 2025-11-24 15:20:23,565 | INFO     | pid: 1116182
[2025-11-24 08:20:56] 2025-11-24 15:20:23,565 | INFO     | pgrp: 1116182
[2025-11-24 08:20:56] 2025-11-24 15:20:23,565 | INFO     | corecount: 4
[2025-11-24 08:20:56] 2025-11-24 15:20:23,565 | INFO     | event service: False
[2025-11-24 08:20:56] 2025-11-24 15:20:23,565 | INFO     | sizes: {0: 2297978, 1: 2298841, 3: 2299103, 11: 2299131, 27018: 2336902, 27021: 2346701, 27023: 2346885, 27026: 2347131}
[2025-11-24 08:20:56] 2025-11-24 15:20:23,566 | INFO     | --------------------------------------------------
[2025-11-24 08:20:56] 2025-11-24 15:20:23,566 | INFO     | 
[2025-11-24 08:20:56] 2025-11-24 15:20:23,566 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/6
[2025-11-24 08:20:56] 2025-11-24 15:20:23,577 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 08:20:56] 2025-11-24 15:20:23,577 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 08:20:56] 2025-11-24 15:20:23,577 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 08:20:56] 2025-11-24 15:20:23,577 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 08:20:56] 2025-11-24 15:20:23,577 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 08:20:56] 2025-11-24 15:20:23,577 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 08:20:56] 2025-11-24 15:20:23,577 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 08:20:56] 2025-11-24 15:20:23,577 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 08:20:56] 2025-11-24 15:20:23,577 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 08:20:56] 2025-11-24 15:20:23,577 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 08:20:56] 2025-11-24 15:20:23,577 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 08:20:56] 2025-11-24 15:20:23,577 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 08:20:56] 2025-11-24 15:20:23,577 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 08:20:56] 2025-11-24 15:20:23,577 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 08:20:56] 2025-11-24 15:20:23,577 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 08:20:56] 2025-11-24 15:20:23,577 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 08:20:56] 2025-11-24 15:20:23,577 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 08:20:56] 2025-11-24 15:20:23,577 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 08:20:56] 2025-11-24 15:20:23,577 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 08:20:56] 2025-11-24 15:20:23,577 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 08:20:56] 2025-11-24 15:20:23,578 | INFO     | job 6895358584 has completed (purged errors)
[2025-11-24 08:20:56] 2025-11-24 15:20:23,578 | INFO     | overall cleanup function is called
[2025-11-24 08:20:56] 2025-11-24 15:20:24,586 | INFO     | --- collectZombieJob: --- 10, [1116182]
[2025-11-24 08:20:56] 2025-11-24 15:20:24,586 | INFO     | zombie collector waiting for pid 1116182
[2025-11-24 08:20:56] 2025-11-24 15:20:24,586 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 08:20:56] 2025-11-24 15:20:24,586 | INFO     | collected zombie processes
[2025-11-24 08:20:56] 2025-11-24 15:20:24,586 | INFO     | will attempt to kill all subprocesses of pid=1116182
[2025-11-24 08:20:56] 2025-11-24 15:20:24,654 | INFO     | process IDs to be killed: [1116182] (in reverse order)
[2025-11-24 08:20:56] 2025-11-24 15:20:24,697 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 08:20:56] 2025-11-24 15:20:24,698 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 08:20:56] 2025-11-24 15:20:24,701 | INFO     | did not find any defunct processes belonging to 1116182
[2025-11-24 08:20:56] 2025-11-24 15:20:24,703 | INFO     | did not find any defunct processes belonging to 1116182
[2025-11-24 08:20:56] 2025-11-24 15:20:24,703 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 08:20:56] 2025-11-24 15:20:24,703 | INFO     | ready for new job
[2025-11-24 08:20:56] 2025-11-24 15:20:24,704 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 08:20:56] 2025-11-24 15:20:24,705 | INFO     | ***************************************
[2025-11-24 08:20:56] 2025-11-24 15:20:24,705 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 08:20:56] 2025-11-24 15:20:24,705 | INFO     | ***************************************
[2025-11-24 08:20:56] 2025-11-24 15:20:24,705 | INFO     | 
[2025-11-24 08:20:56] 2025-11-24 15:20:24,706 | INFO     | architecture information:
[2025-11-24 08:20:56] 2025-11-24 15:20:24,707 | INFO     | executing command: cat /etc/os-release
[2025-11-24 08:20:56] 2025-11-24 15:20:24,715 | INFO     | cat /etc/os-release:
[2025-11-24 08:20:56] NAME="CentOS Linux"
[2025-11-24 08:20:56] VERSION="7 (Core)"
[2025-11-24 08:20:56] ID="centos"
[2025-11-24 08:20:56] ID_LIKE="rhel fedora"
[2025-11-24 08:20:56] VERSION_ID="7"
[2025-11-24 08:20:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 08:20:56] ANSI_COLOR="0;31"
[2025-11-24 08:20:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 08:20:56] HOME_URL="https://www.centos.org/"
[2025-11-24 08:20:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 08:20:56] 
[2025-11-24 08:20:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 08:20:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 08:20:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 08:20:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 08:20:56] 
[2025-11-24 08:20:56] 2025-11-24 15:20:24,715 | INFO     | ***************************************
[2025-11-24 08:20:56] 2025-11-24 15:20:25,218 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/6
[2025-11-24 08:20:56] 2025-11-24 15:20:25,233 | INFO     | sufficient remaining disk space (427869339648 B)
[2025-11-24 08:20:56] 2025-11-24 15:20:25,233 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 08:20:56] 2025-11-24 15:20:25,233 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 08:20:56] 2025-11-24 15:20:25,233 | INFO     | update_server=False
[2025-11-24 08:20:56] 2025-11-24 15:20:25,233 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 08:20:56] 2025-11-24 15:20:25,234 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 08:20:56] 2025-11-24 15:20:25,265 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-24 08:20:56] 2025-11-24 15:20:25,265 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-24 08:20:56] 2025-11-24 15:20:25,265 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 08:20:56] 2025-11-24 15:20:25,266 | INFO     | will abort loop
[2025-11-24 08:20:56] 2025-11-24 15:20:25,467 | INFO     | all data control threads have been joined
[2025-11-24 08:20:56] 2025-11-24 15:20:25,608 | INFO     | all job control threads have been joined
[2025-11-24 08:20:56] 2025-11-24 15:20:25,716 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 08:20:56] 2025-11-24 15:20:25,987 | INFO     | all payload control threads have been joined
[2025-11-24 08:20:56] 2025-11-24 15:20:26,199 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 08:20:56] 2025-11-24 15:20:26,238 | INFO     | [job] queue monitor thread has finished
[2025-11-24 08:20:56] 2025-11-24 15:20:26,238 | INFO     | [job] retrieve thread has finished
[2025-11-24 08:20:56] 2025-11-24 15:20:26,271 | INFO     | [job] job monitor thread has finished
[2025-11-24 08:20:56] 2025-11-24 15:20:26,472 | INFO     | [data] control thread has finished
[2025-11-24 08:20:56] 2025-11-24 15:20:26,610 | INFO     | [job] control thread has finished
[2025-11-24 08:20:56] 2025-11-24 15:20:26,829 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 08:20:56] 2025-11-24 15:20:26,971 | INFO     | [data] copytool_in thread has finished
[2025-11-24 08:20:56] 2025-11-24 15:20:26,992 | INFO     | [payload] control thread has finished
[2025-11-24 08:20:56] 2025-11-24 15:20:27,243 | INFO     | [job] validate thread has finished
[2025-11-24 08:20:56] 2025-11-24 15:20:27,430 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 08:20:56] 2025-11-24 15:20:27,528 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 08:20:56] 2025-11-24 15:20:27,574 | INFO     | [payload] validate_post thread has finished
[2025-11-24 08:20:56] 2025-11-24 15:20:27,632 | INFO     | [payload] failed_post thread has finished
[2025-11-24 08:20:56] 2025-11-24 15:20:27,658 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 08:20:56] 2025-11-24 15:20:28,204 | INFO     | [data] copytool_out thread has finished
[2025-11-24 08:20:56] 2025-11-24 15:20:28,549 | INFO     | [monitor] cgroup control has ended
[2025-11-24 08:20:56] 2025-11-24 15:20:29,722 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 08:20:56] 2025-11-24 15:20:31,056 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 123451214305088)>', '<ExcThread(monitor, started 123450645546752)>']
[2025-11-24 08:20:56] 2025-11-24 15:20:36,081 | INFO     | all workflow threads have been joined
[2025-11-24 08:20:56] 2025-11-24 15:20:36,081 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 08:20:56] 2025-11-24 15:20:36,082 | INFO     | traces error code: 0
[2025-11-24 08:20:56] 2025-11-24 15:20:36,082 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 08:20:56] 2025-11-24 15:20:55,028 | INFO     | PID=1109512 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-24 08:20:56] 2025-11-24 15:20:55,029 | INFO     | .. there are 7 such processes running
[2025-11-24 08:20:56] 2025-11-24 15:20:55,029 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 08:20:56] 2025-11-24 15:20:55,029 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 08:20:56] 2025-11-24 15:20:55,029 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 08:20:56] 2025-11-24 15:20:55,029 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 08:20:56] 2025-11-24 15:20:55,029 | CRITICAL | thread 'MainThread' is not alive
[2025-11-24 08:20:56] 2025-11-24 15:20:55,029 | INFO     | [monitor] control thread has ended
[2025-11-24 08:20:56] 2025-11-24 15:20:55,080 [wrapper] ==== pilot stdout END ====
[2025-11-24 08:20:56] 2025-11-24 15:20:55,082 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 08:20:56] 2025-11-24 15:20:55,083 [wrapper] pilotpid: 1109512
[2025-11-24 08:20:56] 2025-11-24 15:20:55,085 [wrapper] Pilot exit status: 0
[2025-11-24 08:20:56] 2025-11-24 15:20:55,090 [wrapper] pandaids: 6895358584
[2025-11-24 08:20:56] 2025-11-24 15:20:55,114 [wrapper] cleanup supervisor_pilot 1500334 1109513
[2025-11-24 08:20:56] 2025-11-24 15:20:55,115 [wrapper] Test setup, not cleaning
[2025-11-24 08:20:56] 2025-11-24 15:20:55,116 [wrapper] apfmon messages muted
[2025-11-24 08:20:56] 2025-11-24 15:20:55,118 [wrapper] ==== wrapper stdout END ====
[2025-11-24 08:20:56] 2025-11-24 15:20:55,119 [wrapper] ==== wrapper stderr END ====
[2025-11-24 08:20:56]  *** Error codes and diagnostics ***
[2025-11-24 08:20:56]     "exeErrorCode": 0,
[2025-11-24 08:20:56]     "exeErrorDiag": "",
[2025-11-24 08:20:56]     "pilotErrorCode": 0,
[2025-11-24 08:20:56]     "pilotErrorDiag": "",
[2025-11-24 08:20:56]  *** Listing of results directory ***
[2025-11-24 08:20:56] total 1320660
[2025-11-24 08:20:56] -rw-r--r-- 1 boinc boinc    576529 Nov 23 05:50 pilot3.tar.gz
[2025-11-24 08:20:56] -rw-r--r-- 1 boinc boinc      5112 Nov 23 05:53 queuedata.json
[2025-11-24 08:20:56] -rwx------ 1 boinc boinc     36292 Nov 23 05:54 runpilot2-wrapper.sh
[2025-11-24 08:20:56] -rw-r--r-- 1 boinc boinc       100 Nov 24 00:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 08:20:56] -rwxr-xr-x 1 boinc boinc      7986 Nov 24 00:49 run_atlas
[2025-11-24 08:20:56] -rw-r--r-- 1 boinc boinc       105 Nov 24 00:49 job.xml
[2025-11-24 08:20:56] -rw-r--r-- 1 boinc boinc      9983 Nov 24 00:49 init_data.xml
[2025-11-24 08:20:56] -rw-r--r-- 2 boinc boinc 409588042 Nov 24 00:49 EVNT.47483658._000735.pool.root.1
[2025-11-24 08:20:56] -rw-r--r-- 2 boinc boinc     15847 Nov 24 00:49 start_atlas.sh
[2025-11-24 08:20:56] drwxrwx--x 2 boinc boinc      4096 Nov 24 00:49 shared
[2025-11-24 08:20:56] -rw-r--r-- 2 boinc boinc    590105 Nov 24 00:49 input.tar.gz
[2025-11-24 08:20:56] -rw-r--r-- 1 boinc boinc       112 Nov 24 00:49 stderr.txt
[2025-11-24 08:20:56] -rw-r--r-- 1 boinc boinc         0 Nov 24 00:49 boinc_lockfile
[2025-11-24 08:20:56] -rw-r--r-- 1 boinc boinc      2785 Nov 24 00:49 pandaJob.out
[2025-11-24 08:20:56] -rw------- 1 boinc boinc    989786 Nov 24 00:49 agis_schedconf.cvmfs.json
[2025-11-24 08:20:56] drwx------ 5 boinc boinc      4096 Nov 24 00:49 pilot3
[2025-11-24 08:20:56] -rw-r--r-- 1 boinc boinc       532 Nov 24 08:16 boinc_task_state.xml
[2025-11-24 08:20:56] -rw------- 1 boinc boinc 928508479 Nov 24 08:19 HITS.47556137._007307.pool.root.1
[2025-11-24 08:20:56] -rw------- 1 boinc boinc        95 Nov 24 08:20 pilot_heartbeat.json
[2025-11-24 08:20:56] -rw------- 1 boinc boinc      1031 Nov 24 08:20 memory_monitor_summary.json
[2025-11-24 08:20:56] -rw------- 1 boinc boinc   1516227 Nov 24 08:20 agis_ddmendpoints.agis.ALL.json
[2025-11-24 08:20:56] -rw------- 1 boinc boinc   1269564 Nov 24 08:20 log.47556137._007307.job.log.tgz.1
[2025-11-24 08:20:56] -rw------- 1 boinc boinc      8547 Nov 24 08:20 heartbeat.json
[2025-11-24 08:20:56] -rw-r--r-- 1 boinc boinc      8192 Nov 24 08:20 boinc_mmap_file
[2025-11-24 08:20:56] -rw-r--r-- 1 boinc boinc        29 Nov 24 08:20 wrapper_checkpoint.txt
[2025-11-24 08:20:56] -rw------- 1 boinc boinc       892 Nov 24 08:20 pilotlog.txt
[2025-11-24 08:20:56] -rw------- 1 boinc boinc   3915152 Nov 24 08:20 log.47556137._007307.job.log.1
[2025-11-24 08:20:56] -rw------- 1 boinc boinc       353 Nov 24 08:20 output.list
[2025-11-24 08:20:56] -rw-r--r-- 1 boinc boinc       620 Nov 24 08:20 runtime_log
[2025-11-24 08:20:56] -rw------- 1 boinc boinc   5201920 Nov 24 08:20 result.tar.gz
[2025-11-24 08:20:56] -rw-r--r-- 1 boinc boinc      8920 Nov 24 08:20 runtime_log.err
[2025-11-24 08:20:56] -rw------- 1 boinc boinc       661 Nov 24 08:20 NpJMDmpmOh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmkXIKDmBoMU8n.diag
[2025-11-24 08:20:56] HITS file was successfully produced:
[2025-11-24 08:20:56] -rw------- 1 boinc boinc 928508479 Nov 24 08:19 shared/HITS.pool.root.1
[2025-11-24 08:20:56]  *** Contents of shared directory: ***
[2025-11-24 08:20:56] total 1312424
[2025-11-24 08:20:56] -rw-r--r-- 2 boinc boinc 409588042 Nov 24 00:49 ATLAS.root_0
[2025-11-24 08:20:56] -rw-r--r-- 2 boinc boinc     15847 Nov 24 00:49 start_atlas.sh
[2025-11-24 08:20:56] -rw-r--r-- 2 boinc boinc    590105 Nov 24 00:49 input.tar.gz
[2025-11-24 08:20:56] -rw------- 1 boinc boinc 928508479 Nov 24 08:19 HITS.pool.root.1
[2025-11-24 08:20:56] -rw------- 1 boinc boinc   5201920 Nov 24 08:20 result.tar.gz
08:20:56 (1105666): run_atlas exited; CPU time 107062.316380
08:20:56 (1105666): called boinc_finish(0)

</stderr_txt>
]]>

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