Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
03:36:53 (2383481): wrapper (7.7.26015): starting
03:36:53 (2383481): wrapper: running run_atlas (--nthreads 4)
[2025-11-26 03:36:53] Arguments: --nthreads 4
[2025-11-26 03:36:53] Threads: 4
[2025-11-26 03:36:53] Checking for CVMFS
[2025-11-26 03:36:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 03:36:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 03:36:53] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 03:36:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 03:36:53] 2.9.2.0 849437 10627 111076 153305 1 81 31566846 36864001 0 130560 1 4245099 99.933 546898 861 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-26 03:36:53] CVMFS is ok
[2025-11-26 03:36:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 03:36:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 03:36:53] Further information can be found at the LHC@home message board.
[2025-11-26 03:36:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 03:36:53] Checking for apptainer binary...
[2025-11-26 03:36:53] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 03:36:53] Running /usr/bin/apptainer --version
[2025-11-26 03:36:53] apptainer version 1.4.1-1.1
[2025-11-26 03:36:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 03:36:53] iaxoA393
[2025-11-26 03:36:53] apptainer works
[2025-11-26 03:36:53] Set ATHENA_PROC_NUMBER=4
[2025-11-26 03:36:53] Set ATHENA_CORE_NUMBER=4
[2025-11-26 03:36:53] Starting ATLAS job with PandaID=6895358066
[2025-11-26 03:36:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 10:28:38]  *** The last 200 lines of the pilot log: ***
[2025-11-26 10:28:38] 2025-11-26 09:27:40,688 | INFO     | executing command: cat /etc/os-release
[2025-11-26 10:28:38] 2025-11-26 09:27:40,701 | INFO     | cat /etc/os-release:
[2025-11-26 10:28:38] NAME="CentOS Linux"
[2025-11-26 10:28:38] VERSION="7 (Core)"
[2025-11-26 10:28:38] ID="centos"
[2025-11-26 10:28:38] ID_LIKE="rhel fedora"
[2025-11-26 10:28:38] VERSION_ID="7"
[2025-11-26 10:28:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 10:28:38] ANSI_COLOR="0;31"
[2025-11-26 10:28:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 10:28:38] HOME_URL="https://www.centos.org/"
[2025-11-26 10:28:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 10:28:38] 
[2025-11-26 10:28:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 10:28:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 10:28:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 10:28:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 10:28:38] 
[2025-11-26 10:28:38] 2025-11-26 09:27:40,701 | INFO     | ***************************************
[2025-11-26 10:28:38] 2025-11-26 09:27:41,204 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-26 10:28:38] 2025-11-26 09:27:41,220 | INFO     | sufficient remaining disk space (325117280256 B)
[2025-11-26 10:28:38] 2025-11-26 09:27:41,220 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 10:28:38] 2025-11-26 09:27:41,220 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 10:28:38] 2025-11-26 09:27:41,220 | INFO     | update_server=False
[2025-11-26 10:28:38] 2025-11-26 09:27:41,220 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 10:28:38] 2025-11-26 09:27:41,220 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 10:28:38] 2025-11-26 09:27:41,220 | INFO     | aborting loop
[2025-11-26 10:28:38] 2025-11-26 09:27:41,220 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 10:28:38] 2025-11-26 09:27:41,231 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 10:28:38] 2025-11-26 09:27:41,460 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 10:28:38] 2025-11-26 09:27:41,812 | INFO     | all data control threads have been joined
[2025-11-26 10:28:38] 2025-11-26 09:27:42,226 | INFO     | [job] job monitor thread has finished
[2025-11-26 10:28:38] 2025-11-26 09:27:42,226 | INFO     | [job] retrieve thread has finished
[2025-11-26 10:28:38] 2025-11-26 09:27:42,226 | INFO     | [job] queue monitor thread has finished
[2025-11-26 10:28:38] 2025-11-26 09:27:42,238 | INFO     | all job control threads have been joined
[2025-11-26 10:28:38] 2025-11-26 09:27:42,250 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 10:28:38] 2025-11-26 09:27:42,404 | INFO     | all payload control threads have been joined
[2025-11-26 10:28:38] 2025-11-26 09:27:42,546 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 10:28:38] 2025-11-26 09:27:42,604 | INFO     | [payload] failed_post thread has finished
[2025-11-26 10:28:38] 2025-11-26 09:27:42,817 | INFO     | [data] control thread has finished
[2025-11-26 10:28:38] 2025-11-26 09:27:43,049 | INFO     | [job] validate thread has finished
[2025-11-26 10:28:38] 2025-11-26 09:27:43,243 | INFO     | [job] control thread has finished
[2025-11-26 10:28:38] 2025-11-26 09:27:43,256 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 10:28:38] 2025-11-26 09:27:43,290 | INFO     | [payload] validate_post thread has finished
[2025-11-26 10:28:38] 2025-11-26 09:27:43,410 | INFO     | [payload] control thread has finished
[2025-11-26 10:28:38] 2025-11-26 09:27:43,467 | INFO     | [data] copytool_out thread has finished
[2025-11-26 10:28:38] 2025-11-26 09:27:43,471 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 10:28:38] 2025-11-26 09:27:43,697 | INFO     | [data] copytool_in thread has finished
[2025-11-26 10:28:38] 2025-11-26 09:27:45,238 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 10:28:38] 2025-11-26 09:28:10,848 | INFO     | PID=2387267 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 10:28:38] 2025-11-26 09:28:10,848 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 10:28:38] 2025-11-26 09:28:10,848 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 10:28:38] 2025-11-26 09:28:10,848 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 10:28:38] 2025-11-26 09:28:32,966 | INFO     | [monitor] cgroup control has ended
[2025-11-26 10:28:38] 2025-11-26 09:28:33,274 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139951905904448)>', '<ExcThread(monitor, started 139950930503424)>']
[2025-11-26 10:28:38] 2025-11-26 09:28:33,971 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 10:28:38] 2025-11-26 09:28:33,972 | INFO     | [monitor] control thread has ended
[2025-11-26 10:28:38] 2025-11-26 09:28:38,300 | INFO     | all workflow threads have been joined
[2025-11-26 10:28:38] 2025-11-26 09:28:38,300 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 10:28:38] 2025-11-26 09:28:38,300 | INFO     | traces error code: 0
[2025-11-26 10:28:38] 2025-11-26 09:28:38,300 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 10:28:38] 2025-11-26 09:28:38,369 [wrapper] ==== pilot stdout END ====
[2025-11-26 10:28:38] 2025-11-26 09:28:38,372 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 10:28:38] 2025-11-26 09:28:38,376 [wrapper] pilotpid: 2387267
[2025-11-26 10:28:38] 2025-11-26 09:28:38,379 [wrapper] Pilot exit status: 0
[2025-11-26 10:28:38] 2025-11-26 09:28:38,390 [wrapper] pandaids: 6895358066
[2025-11-26 10:28:38] 2025-11-26 09:28:38,412 [wrapper] cleanup supervisor_pilot 2439139 2387268
[2025-11-26 10:28:38] 2025-11-26 09:28:38,415 [wrapper] Test setup, not cleaning
[2025-11-26 10:28:38] 2025-11-26 09:28:38,419 [wrapper] apfmon messages muted
[2025-11-26 10:28:38] 2025-11-26 09:28:38,422 [wrapper] ==== wrapper stdout END ====
[2025-11-26 10:28:38] 2025-11-26 09:28:38,426 [wrapper] ==== wrapper stderr END ====
[2025-11-26 10:28:38]  *** Error codes and diagnostics ***
[2025-11-26 10:28:38]     "exeErrorCode": 0,
[2025-11-26 10:28:38]     "exeErrorDiag": "",
[2025-11-26 10:28:38]     "pilotErrorCode": 0,
[2025-11-26 10:28:38]     "pilotErrorDiag": "",
[2025-11-26 10:28:38]  *** Listing of results directory ***
[2025-11-26 10:28:38] total 1316304
[2025-11-26 10:28:38] -rw-r--r-- 1 boinc boinc    576529 Nov 23 13:14 pilot3.tar.gz
[2025-11-26 10:28:38] -rw-r--r-- 1 boinc boinc      5112 Nov 23 13:21 queuedata.json
[2025-11-26 10:28:38] -rwx------ 1 boinc boinc     36292 Nov 23 13:22 runpilot2-wrapper.sh
[2025-11-26 10:28:38] -rw-r--r-- 1 boinc boinc       100 Nov 26 03:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 10:28:38] -rwxr-xr-x 1 boinc boinc      7986 Nov 26 03:36 run_atlas
[2025-11-26 10:28:38] -rw-r--r-- 1 boinc boinc       105 Nov 26 03:36 job.xml
[2025-11-26 10:28:38] -rw-r--r-- 2 boinc boinc 409561901 Nov 26 03:36 EVNT.47483658._000728.pool.root.1
[2025-11-26 10:28:38] -rw-r--r-- 2 boinc boinc    590097 Nov 26 03:36 input.tar.gz
[2025-11-26 10:28:38] -rw-r--r-- 2 boinc boinc     15847 Nov 26 03:36 start_atlas.sh
[2025-11-26 10:28:38] drwxrwx--x 2 boinc boinc      4096 Nov 26 03:36 shared
[2025-11-26 10:28:38] -rw-r--r-- 1 boinc boinc         0 Nov 26 03:36 boinc_setup_complete
[2025-11-26 10:28:38] -rw-r--r-- 1 boinc boinc      6373 Nov 26 03:36 init_data.xml
[2025-11-26 10:28:38] -rw-r--r-- 1 boinc boinc         0 Nov 26 03:36 boinc_lockfile
[2025-11-26 10:28:38] -rw-r--r-- 1 boinc boinc      2785 Nov 26 03:36 pandaJob.out
[2025-11-26 10:28:38] -rw------- 1 boinc boinc    991877 Nov 26 03:36 agis_schedconf.cvmfs.json
[2025-11-26 10:28:38] drwx------ 5 boinc boinc      4096 Nov 26 03:37 pilot3
[2025-11-26 10:28:38] -rw-r--r-- 1 boinc boinc       532 Nov 26 10:23 boinc_task_state.xml
[2025-11-26 10:28:38] -rw------- 1 boinc boinc 924964704 Nov 26 10:27 HITS.47556137._007232.pool.root.1
[2025-11-26 10:28:38] -rw------- 1 boinc boinc      1032 Nov 26 10:27 memory_monitor_summary.json
[2025-11-26 10:28:38] -rw------- 1 boinc boinc   1516240 Nov 26 10:27 agis_ddmendpoints.agis.ALL.json
[2025-11-26 10:28:38] -rw------- 1 boinc boinc   1255868 Nov 26 10:27 log.47556137._007232.job.log.tgz.1
[2025-11-26 10:28:38] -rw------- 1 boinc boinc      8572 Nov 26 10:27 heartbeat.json
[2025-11-26 10:28:38] -rw------- 1 boinc boinc        95 Nov 26 10:28 pilot_heartbeat.json
[2025-11-26 10:28:38] -rw-r--r-- 1 boinc boinc      8192 Nov 26 10:28 boinc_mmap_file
[2025-11-26 10:28:38] -rw-r--r-- 1 boinc boinc        28 Nov 26 10:28 wrapper_checkpoint.txt
[2025-11-26 10:28:38] -rw------- 1 boinc boinc      4752 Nov 26 10:28 pilotlog.txt
[2025-11-26 10:28:38] -rw------- 1 boinc boinc   3475335 Nov 26 10:28 log.47556137._007232.job.log.1
[2025-11-26 10:28:38] -rw------- 1 boinc boinc       353 Nov 26 10:28 output.list
[2025-11-26 10:28:38] -rw-r--r-- 1 boinc boinc       620 Nov 26 10:28 runtime_log
[2025-11-26 10:28:38] -rw------- 1 boinc boinc   4751360 Nov 26 10:28 result.tar.gz
[2025-11-26 10:28:38] -rw-r--r-- 1 boinc boinc      8908 Nov 26 10:28 runtime_log.err
[2025-11-26 10:28:38] -rw------- 1 boinc boinc       667 Nov 26 10:28 3fVMDm3HOh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmJtKKDm0WQATm.diag
[2025-11-26 10:28:38] -rw-r--r-- 1 boinc boinc      8887 Nov 26 10:28 stderr.txt
[2025-11-26 10:28:38] HITS file was successfully produced:
[2025-11-26 10:28:38] -rw------- 1 boinc boinc 924964704 Nov 26 10:27 shared/HITS.pool.root.1
[2025-11-26 10:28:38]  *** Contents of shared directory: ***
[2025-11-26 10:28:38] total 1308496
[2025-11-26 10:28:38] -rw-r--r-- 2 boinc boinc 409561901 Nov 26 03:36 ATLAS.root_0
[2025-11-26 10:28:38] -rw-r--r-- 2 boinc boinc    590097 Nov 26 03:36 input.tar.gz
[2025-11-26 10:28:38] -rw-r--r-- 2 boinc boinc     15847 Nov 26 03:36 start_atlas.sh
[2025-11-26 10:28:38] -rw------- 1 boinc boinc 924964704 Nov 26 10:27 HITS.pool.root.1
[2025-11-26 10:28:38] -rw------- 1 boinc boinc   4751360 Nov 26 10:28 result.tar.gz
10:28:39 (2383481): run_atlas exited; CPU time 96464.216177
10:28:39 (2383481): called boinc_finish(0)

</stderr_txt>
]]>

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