Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:20:15 (26049): wrapper (7.7.26015): starting
09:20:15 (26049): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 09:20:15] Arguments: --nthreads 8
[2025-11-26 09:20:15] Threads: 8
[2025-11-26 09:20:15] Checking for CVMFS
[2025-11-26 09:20:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 09:20:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 09:20:17] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 09:20:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 09:20:18] 2.11.2.0 7908 87408 120964 153315 1 60 25040116 25165825 1288 130560 12 26527851 99.884 16640638 1975 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-26 09:20:18] CVMFS is ok
[2025-11-26 09:20:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 09:20:18] Checking for apptainer binary...
[2025-11-26 09:20:18] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 09:20:18] Running /usr/bin/apptainer --version
[2025-11-26 09:20:19] apptainer version 1.3.2-1.el7
[2025-11-26 09:20:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 09:20:37] cg-vwn301.simple-grid.lan
[2025-11-26 09:20:37] apptainer works
[2025-11-26 09:20:37] Set ATHENA_PROC_NUMBER=8
[2025-11-26 09:20:37] Set ATHENA_CORE_NUMBER=8
[2025-11-26 09:20:37] Starting ATLAS job with PandaID=6895357700
[2025-11-26 09:20:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 09:48:21]  *** The last 200 lines of the pilot log: ***
[2025-11-27 09:48:21] 2025-11-27 08:47:29,931 | INFO     | time since job start (87771s) is within the limit (172800.0s)
[2025-11-27 09:48:21] 2025-11-27 08:47:31,659 | INFO     | monitor loop #5901: job 0:6895357700 is in state 'finished'
[2025-11-27 09:48:21] 2025-11-27 08:47:31,660 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 09:48:21] 2025-11-27 08:47:31,938 | INFO     | time since job start (87773s) is within the limit (172800.0s)
[2025-11-27 09:48:21] 2025-11-27 08:47:33,945 | INFO     | time since job start (87775s) is within the limit (172800.0s)
[2025-11-27 09:48:21] 2025-11-27 08:47:34,165 | INFO     | monitor loop #5902: job 0:6895357700 is in state 'finished'
[2025-11-27 09:48:21] 2025-11-27 08:47:34,166 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 09:48:21] 2025-11-27 08:47:35,960 | INFO     | time since job start (87777s) is within the limit (172800.0s)
[2025-11-27 09:48:21] 2025-11-27 08:47:36,674 | INFO     | monitor loop #5903: job 0:6895357700 is in state 'finished'
[2025-11-27 09:48:21] 2025-11-27 08:47:36,675 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 09:48:21] 2025-11-27 08:47:37,967 | INFO     | time since job start (87779s) is within the limit (172800.0s)
[2025-11-27 09:48:21] 2025-11-27 08:47:39,185 | INFO     | monitor loop #5904: job 0:6895357700 is in state 'finished'
[2025-11-27 09:48:21] 2025-11-27 08:47:39,186 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 09:48:21] 2025-11-27 08:47:39,974 | INFO     | time since job start (87781s) is within the limit (172800.0s)
[2025-11-27 09:48:21] 2025-11-27 08:47:40,645 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 09:48:21] 2025-11-27 08:47:40,647 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.9959999999996
[2025-11-27 09:48:21] 2025-11-27 08:47:40,650 | INFO     | using path: /var/lib/boinc/slots/8/PanDA_Pilot-6895357700/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 09:48:21] 2025-11-27 08:47:40,650 | INFO     | extracted standard info from prmon json
[2025-11-27 09:48:21] 2025-11-27 08:47:40,650 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 09:48:21] 2025-11-27 08:47:40,650 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 09:48:21] 2025-11-27 08:47:40,675 | INFO     | fitting pss+swap vs Time
[2025-11-27 09:48:21] 2025-11-27 08:47:40,677 | INFO     | sum of square deviations: 904845355164.6855
[2025-11-27 09:48:21] 2025-11-27 08:47:40,741 | INFO     | sum of deviations: 3556729701114.662
[2025-11-27 09:48:21] 2025-11-27 08:47:40,741 | INFO     | mean x: 1764189543.076277
[2025-11-27 09:48:21] 2025-11-27 08:47:40,741 | INFO     | mean y: 2829434.6270118966
[2025-11-27 09:48:21] 2025-11-27 08:47:40,742 | INFO     | intersect: -6931775810.833158
[2025-11-27 09:48:21] 2025-11-27 08:47:40,743 | INFO     | chi2: 27.959823964513774
[2025-11-27 09:48:21] 2025-11-27 08:47:40,745 | INFO     | sum of square deviations: 895380977018.8737
[2025-11-27 09:48:21] 2025-11-27 08:47:40,824 | INFO     | sum of deviations: 4015725157799.3867
[2025-11-27 09:48:21] 2025-11-27 08:47:40,824 | INFO     | mean x: 1764189390.5800562
[2025-11-27 09:48:21] 2025-11-27 08:47:40,824 | INFO     | mean y: 2836830.386938202
[2025-11-27 09:48:21] 2025-11-27 08:47:40,824 | INFO     | intersect: -7909437274.947071
[2025-11-27 09:48:21] 2025-11-27 08:47:40,826 | INFO     | chi2: 24.90151402452848
[2025-11-27 09:48:21] 2025-11-27 08:47:40,826 | INFO     | current chi2=24.90151402452848 (change=10.93823031170317 %)
[2025-11-27 09:48:21] 2025-11-27 08:47:40,826 | INFO     | right removable region: 1423
[2025-11-27 09:48:21] 2025-11-27 08:47:40,828 | INFO     | sum of square deviations: 895380038838.8729
[2025-11-27 09:48:21] 2025-11-27 08:47:40,884 | INFO     | sum of deviations: 2948464463306.43
[2025-11-27 09:48:21] 2025-11-27 08:47:40,884 | INFO     | mean x: 1764189695.5800562
[2025-11-27 09:48:21] 2025-11-27 08:47:40,885 | INFO     | mean y: 2839234.6278089886
[2025-11-27 09:48:21] 2025-11-27 08:47:40,885 | INFO     | intersect: -5806594076.723062
[2025-11-27 09:48:21] 2025-11-27 08:47:40,886 | INFO     | chi2: 23.015111958558105
[2025-11-27 09:48:21] 2025-11-27 08:47:40,886 | INFO     | current chi2=23.015111958558105 (change=17.685061294489657 %)
[2025-11-27 09:48:21] 2025-11-27 08:47:40,887 | INFO     | left removable region: 10
[2025-11-27 09:48:21] 2025-11-27 08:47:40,888 | INFO     | sum of square deviations: 874790284265.9426
[2025-11-27 09:48:21] 2025-11-27 08:47:40,958 | INFO     | sum of deviations: 2973164556544.66
[2025-11-27 09:48:21] 2025-11-27 08:47:40,958 | INFO     | mean x: 1764189665.0884643
[2025-11-27 09:48:21] 2025-11-27 08:47:40,959 | INFO     | mean y: 2857134.5866949754
[2025-11-27 09:48:21] 2025-11-27 08:47:40,959 | INFO     | intersect: -5993124162.421891
[2025-11-27 09:48:21] 2025-11-27 08:47:40,960 | INFO     | chi2: 15.428690949423396
[2025-11-27 09:48:21] 2025-11-27 08:47:40,961 | INFO     | current memory leak: 3.40 B/s (using 1413 data points, chi2=15.43)
[2025-11-27 09:48:21] 2025-11-27 08:47:40,962 | INFO     | could have reported an average CPU frequency of 1999 MHz (48 samples)
[2025-11-27 09:48:21] 2025-11-27 08:47:40,962 | INFO     | ..............................
[2025-11-27 09:48:21] 2025-11-27 08:47:40,962 | INFO     | . Timing measurements:
[2025-11-27 09:48:21] 2025-11-27 08:47:40,962 | INFO     | . get job = 0 s
[2025-11-27 09:48:21] 2025-11-27 08:47:40,962 | INFO     | . initial setup = 10 s
[2025-11-27 09:48:21] 2025-11-27 08:47:40,963 | INFO     | . payload setup = 167 s
[2025-11-27 09:48:21] 2025-11-27 08:47:40,963 | INFO     | . stage-in = 0 s
[2025-11-27 09:48:21] 2025-11-27 08:47:40,963 | INFO     | . payload execution = 87326 s
[2025-11-27 09:48:21] 2025-11-27 08:47:40,963 | INFO     | . stage-out = 5 s
[2025-11-27 09:48:21] 2025-11-27 08:47:40,963 | INFO     | . log creation = 2 s
[2025-11-27 09:48:21] 2025-11-27 08:47:40,963 | INFO     | ..............................
[2025-11-27 09:48:21] 2025-11-27 08:47:41,081 | INFO     | 
[2025-11-27 09:48:21] 2025-11-27 08:47:41,081 | INFO     | job summary report
[2025-11-27 09:48:21] 2025-11-27 08:47:41,081 | INFO     | --------------------------------------------------
[2025-11-27 09:48:21] 2025-11-27 08:47:41,082 | INFO     | PanDA job id: 6895357700
[2025-11-27 09:48:21] 2025-11-27 08:47:41,082 | INFO     | task id: 47556137
[2025-11-27 09:48:21] 2025-11-27 08:47:41,082 | INFO     | errors: (none)
[2025-11-27 09:48:21] 2025-11-27 08:47:41,082 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 09:48:21] 2025-11-27 08:47:41,082 | INFO     | pilot state: finished 
[2025-11-27 09:48:21] 2025-11-27 08:47:41,082 | INFO     | transexitcode: 0
[2025-11-27 09:48:21] 2025-11-27 08:47:41,082 | INFO     | exeerrorcode: 0
[2025-11-27 09:48:21] 2025-11-27 08:47:41,082 | INFO     | exeerrordiag: 
[2025-11-27 09:48:21] 2025-11-27 08:47:41,082 | INFO     | exitcode: 0
[2025-11-27 09:48:21] 2025-11-27 08:47:41,082 | INFO     | exitmsg: OK
[2025-11-27 09:48:21] 2025-11-27 08:47:41,082 | INFO     | cpuconsumptiontime: 327221 s
[2025-11-27 09:48:21] 2025-11-27 08:47:41,082 | INFO     | nevents: 1000
[2025-11-27 09:48:21] 2025-11-27 08:47:41,083 | INFO     | neventsw: 0
[2025-11-27 09:48:21] 2025-11-27 08:47:41,083 | INFO     | pid: 4018
[2025-11-27 09:48:21] 2025-11-27 08:47:41,083 | INFO     | pgrp: 4018
[2025-11-27 09:48:21] 2025-11-27 08:47:41,083 | INFO     | corecount: 8
[2025-11-27 09:48:21] 2025-11-27 08:47:41,083 | INFO     | event service: False
[2025-11-27 09:48:21] 2025-11-27 08:47:41,083 | INFO     | sizes: {0: 2284138, 1: 2284337, 12: 2284337, 23: 2284365, 33: 2284393, 44: 2284449, 55: 2284605, 65: 2284633, 76: 2284661, 87: 2284717, 95: 2285007, 98: 2285315, 8
[2025-11-27 09:48:21] 2025-11-27 08:47:41,083 | INFO     | --------------------------------------------------
[2025-11-27 09:48:21] 2025-11-27 08:47:41,083 | INFO     | 
[2025-11-27 09:48:21] 2025-11-27 08:47:41,083 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2025-11-27 09:48:21] 2025-11-27 08:47:41,415 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 09:48:21] 2025-11-27 08:47:41,415 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 09:48:21] 2025-11-27 08:47:41,416 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 09:48:21] 2025-11-27 08:47:41,416 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 09:48:21] 2025-11-27 08:47:41,416 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 09:48:21] 2025-11-27 08:47:41,416 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 09:48:21] 2025-11-27 08:47:41,416 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 09:48:21] 2025-11-27 08:47:41,416 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 09:48:21] 2025-11-27 08:47:41,416 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 09:48:21] 2025-11-27 08:47:41,416 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 09:48:21] 2025-11-27 08:47:41,416 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 09:48:21] 2025-11-27 08:47:41,416 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 09:48:21] 2025-11-27 08:47:41,416 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 09:48:21] 2025-11-27 08:47:41,417 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 09:48:21] 2025-11-27 08:47:41,417 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 09:48:21] 2025-11-27 08:47:41,417 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 09:48:21] 2025-11-27 08:47:41,417 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 09:48:21] 2025-11-27 08:47:41,417 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 09:48:21] 2025-11-27 08:47:41,417 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 09:48:21] 2025-11-27 08:47:41,417 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 09:48:21] 2025-11-27 08:47:41,417 | INFO     | job 6895357700 has completed (purged errors)
[2025-11-27 09:48:21] 2025-11-27 08:47:41,417 | INFO     | overall cleanup function is called
[2025-11-27 09:48:21] 2025-11-27 08:47:42,432 | INFO     | --- collectZombieJob: --- 10, [4018]
[2025-11-27 09:48:21] 2025-11-27 08:47:42,433 | INFO     | zombie collector waiting for pid 4018
[2025-11-27 09:48:21] 2025-11-27 08:47:42,433 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 09:48:21] 2025-11-27 08:47:42,433 | INFO     | collected zombie processes
[2025-11-27 09:48:21] 2025-11-27 08:47:42,433 | INFO     | will attempt to kill all subprocesses of pid=4018
[2025-11-27 09:48:21] 2025-11-27 08:47:42,537 | INFO     | process IDs to be killed: [4018] (in reverse order)
[2025-11-27 09:48:21] 2025-11-27 08:47:42,981 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 09:48:21] 2025-11-27 08:47:42,982 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 09:48:21] 2025-11-27 08:47:42,985 | INFO     | did not find any defunct processes belonging to 4018
[2025-11-27 09:48:21] 2025-11-27 08:47:42,987 | INFO     | did not find any defunct processes belonging to 4018
[2025-11-27 09:48:21] 2025-11-27 08:47:42,989 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 09:48:21] 2025-11-27 08:47:42,989 | INFO     | ready for new job
[2025-11-27 09:48:21] 2025-11-27 08:47:42,989 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 09:48:21] 2025-11-27 08:47:42,994 | INFO     | ***************************************
[2025-11-27 09:48:21] 2025-11-27 08:47:42,994 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 09:48:21] 2025-11-27 08:47:42,994 | INFO     | ***************************************
[2025-11-27 09:48:21] 2025-11-27 08:47:42,995 | INFO     | 
[2025-11-27 09:48:21] 2025-11-27 08:47:42,995 | INFO     | pilot is running in a VM
[2025-11-27 09:48:21] 2025-11-27 08:47:42,995 | INFO     | architecture information:
[2025-11-27 09:48:21] 2025-11-27 08:47:42,996 | INFO     | executing command: cat /etc/os-release
[2025-11-27 09:48:21] 2025-11-27 08:47:43,211 | INFO     | cat /etc/os-release:
[2025-11-27 09:48:21] NAME="CentOS Linux"
[2025-11-27 09:48:21] VERSION="7 (Core)"
[2025-11-27 09:48:21] ID="centos"
[2025-11-27 09:48:21] ID_LIKE="rhel fedora"
[2025-11-27 09:48:21] VERSION_ID="7"
[2025-11-27 09:48:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 09:48:21] ANSI_COLOR="0;31"
[2025-11-27 09:48:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 09:48:21] HOME_URL="https://www.centos.org/"
[2025-11-27 09:48:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 09:48:21] 
[2025-11-27 09:48:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 09:48:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 09:48:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 09:48:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 09:48:21] 
[2025-11-27 09:48:21] 2025-11-27 08:47:43,211 | INFO     | ***************************************
[2025-11-27 09:48:21] 2025-11-27 08:47:43,715 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2025-11-27 09:48:21] 2025-11-27 08:47:43,847 | INFO     | sufficient remaining disk space (495251881984 B)
[2025-11-27 09:48:21] 2025-11-27 08:47:43,847 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 09:48:21] 2025-11-27 08:47:43,848 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 09:48:21] 2025-11-27 08:47:43,848 | INFO     | update_server=False
[2025-11-27 09:48:21] 2025-11-27 08:47:43,848 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 09:48:21] 2025-11-27 08:47:43,848 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 09:48:21] 2025-11-27 08:47:44,191 | INFO     | all job control threads have been joined
[2025-11-27 09:48:21] 2025-11-27 08:47:44,199 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-27 09:48:21] 2025-11-27 08:47:44,200 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-27 09:48:21] 2025-11-27 08:47:44,200 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 09:48:21] 2025-11-27 08:47:44,200 | INFO     | will abort loop
[2025-11-27 09:48:21] 2025-11-27 08:47:44,213 | INFO     | all data control threads have been joined
[2025-11-27 09:48:21] 2025-11-27 08:47:44,854 | INFO     | [job] retrieve thread has finished
[2025-11-27 09:48:21] 2025-11-27 08:47:44,878 | INFO     | all payload control threads have been joined
[2025-11-27 09:48:21] 2025-11-27 08:47:45,042 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 09:48:21] 2025-11-27 08:47:45,128 | INFO     | [job] validate thread has finished
[2025-11-27 09:48:21] 2025-11-27 08:47:45,172 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 09:48:21] 2025-11-27 08:47:45,198 | INFO     | [job] control thread has finished
[2025-11-27 09:48:21] 2025-11-27 08:47:45,206 | INFO     | [job] job monitor thread has finished
[2025-11-27 09:48:21] 2025-11-27 08:47:45,220 | INFO     | [data] control thread has finished
[2025-11-27 09:48:21] 2025-11-27 08:47:45,397 | INFO     | [data] copytool_in thread has finished
[2025-11-27 09:48:21] 2025-11-27 08:47:45,815 | INFO     | [payload] validate_post thread has finished
[2025-11-27 09:48:21] 2025-11-27 08:47:45,856 | INFO     | [data] copytool_out thread has finished
[2025-11-27 09:48:21] 2025-11-27 08:47:45,885 | INFO     | [payload] control thread has finished
[2025-11-27 09:48:21] 2025-11-27 08:47:46,044 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 09:48:21] 2025-11-27 08:47:46,083 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 09:48:21] 2025-11-27 08:47:46,099 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 09:48:21] 2025-11-27 08:47:46,223 | INFO     | [payload] failed_post thread has finished
[2025-11-27 09:48:21] 2025-11-27 08:47:47,106 | INFO     | [job] queue monitor thread has finished
[2025-11-27 09:48:21] 2025-11-27 08:47:47,149 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 09:48:21] 2025-11-27 08:47:51,159 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 09:48:21] 2025-11-27 08:48:10,904 | INFO     | [monitor] cgroup control has ended
[2025-11-27 09:48:21] 2025-11-27 08:48:12,016 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139744918026048)>', '<ExcThread(monitor, started 139744691037952)>']
[2025-11-27 09:48:21] 2025-11-27 08:48:13,180 | INFO     | PID=29835 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-27 09:48:21] 2025-11-27 08:48:13,180 | INFO     | .. there are 9 such processes running
[2025-11-27 09:48:21] 2025-11-27 08:48:13,181 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 09:48:21] 2025-11-27 08:48:13,181 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 09:48:21] 2025-11-27 08:48:13,181 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 09:48:21] 2025-11-27 08:48:13,181 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 09:48:21] 2025-11-27 08:48:13,181 | INFO     | [monitor] control thread has ended
[2025-11-27 09:48:21] 2025-11-27 08:48:17,042 | INFO     | all workflow threads have been joined
[2025-11-27 09:48:21] 2025-11-27 08:48:17,043 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 09:48:21] 2025-11-27 08:48:17,043 | INFO     | traces error code: 0
[2025-11-27 09:48:21] 2025-11-27 08:48:17,043 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 09:48:21] 2025-11-27 08:48:17,327 [wrapper] ==== pilot stdout END ====
[2025-11-27 09:48:21] 2025-11-27 08:48:17,398 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 09:48:21] 2025-11-27 08:48:17,490 [wrapper] pilotpid: 29835
[2025-11-27 09:48:21] 2025-11-27 08:48:17,607 [wrapper] Pilot exit status: 0
[2025-11-27 09:48:21] 2025-11-27 08:48:18,020 [wrapper] pandaids: 6895357700
[2025-11-27 09:48:21] 2025-11-27 08:48:18,975 [wrapper] cleanup supervisor_pilot 12691 29836
[2025-11-27 09:48:21] 2025-11-27 08:48:19,070 [wrapper] Test setup, not cleaning
[2025-11-27 09:48:21] 2025-11-27 08:48:19,122 [wrapper] apfmon messages muted
[2025-11-27 09:48:21] 2025-11-27 08:48:19,211 [wrapper] ==== wrapper stdout END ====
[2025-11-27 09:48:21] 2025-11-27 08:48:19,267 [wrapper] ==== wrapper stderr END ====
[2025-11-27 09:48:21]  *** Error codes and diagnostics ***
[2025-11-27 09:48:21]     "exeErrorCode": 0,
[2025-11-27 09:48:21]     "exeErrorDiag": "",
[2025-11-27 09:48:21]     "pilotErrorCode": 0,
[2025-11-27 09:48:21]     "pilotErrorDiag": "",
[2025-11-27 09:48:21]  *** Listing of results directory ***
[2025-11-27 09:48:21] total 1341516
[2025-11-27 09:48:21] -rw-r--r--. 1 boinc boinc    576529 Nov 23 12:59 pilot3.tar.gz
[2025-11-27 09:48:21] -rw-r--r--. 1 boinc boinc      5112 Nov 23 13:01 queuedata.json
[2025-11-27 09:48:21] -rwx------. 1 boinc boinc     36292 Nov 23 13:02 runpilot2-wrapper.sh
[2025-11-27 09:48:21] -rw-r--r--. 1 boinc boinc       100 Nov 26 09:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 09:48:21] -rwxr-xr-x. 1 boinc boinc      7986 Nov 26 09:20 run_atlas
[2025-11-27 09:48:21] -rw-r--r--. 1 boinc boinc       105 Nov 26 09:20 job.xml
[2025-11-27 09:48:21] -rw-r--r--. 1 boinc boinc      6391 Nov 26 09:20 init_data.xml
[2025-11-27 09:48:21] -rw-r--r--. 2 boinc boinc 409711379 Nov 26 09:20 EVNT.47483658._000723.pool.root.1
[2025-11-27 09:48:21] -rw-r--r--. 2 boinc boinc     15847 Nov 26 09:20 start_atlas.sh
[2025-11-27 09:48:21] drwxrwx--x. 2 boinc boinc        68 Nov 26 09:20 shared
[2025-11-27 09:48:21] -rw-r--r--. 2 boinc boinc    590100 Nov 26 09:20 input.tar.gz
[2025-11-27 09:48:21] -rw-r--r--. 1 boinc boinc         0 Nov 26 09:20 boinc_lockfile
[2025-11-27 09:48:21] -rw-r--r--. 1 boinc boinc      2783 Nov 26 09:20 pandaJob.out
[2025-11-27 09:48:21] -rw-------. 1 boinc boinc    991877 Nov 26 09:24 agis_schedconf.cvmfs.json
[2025-11-27 09:48:21] drwx------. 5 boinc boinc      4096 Nov 26 09:24 pilot3
[2025-11-27 09:48:21] -rw-r--r--. 1 boinc boinc       533 Nov 27 09:18 boinc_task_state.xml
[2025-11-27 09:48:21] -rw-------. 1 boinc boinc 931709496 Nov 27 09:44 HITS.47556137._007181.pool.root.1
[2025-11-27 09:48:21] -rw-------. 1 boinc boinc      1029 Nov 27 09:45 memory_monitor_summary.json
[2025-11-27 09:48:21] -rw-------. 1 boinc boinc   1516240 Nov 27 09:46 agis_ddmendpoints.agis.ALL.json
[2025-11-27 09:48:21] -rw-------. 1 boinc boinc   2500557 Nov 27 09:46 log.47556137._007181.job.log.tgz.1
[2025-11-27 09:48:21] -rw-------. 1 boinc boinc      7945 Nov 27 09:47 heartbeat.json
[2025-11-27 09:48:21] -rw-r--r--. 1 boinc boinc      8192 Nov 27 09:47 boinc_mmap_file
[2025-11-27 09:48:21] -rw-r--r--. 1 boinc boinc        29 Nov 27 09:47 wrapper_checkpoint.txt
[2025-11-27 09:48:21] -rw-------. 1 boinc boinc        95 Nov 27 09:48 pilot_heartbeat.json
[2025-11-27 09:48:21] -rw-------. 1 boinc boinc      5070 Nov 27 09:48 pilotlog.txt
[2025-11-27 09:48:21] -rw-------. 1 boinc boinc  11694029 Nov 27 09:48 log.47556137._007181.job.log.1
[2025-11-27 09:48:21] -rw-------. 1 boinc boinc       353 Nov 27 09:48 output.list
[2025-11-27 09:48:21] -rw-r--r--. 1 boinc boinc       620 Nov 27 09:48 runtime_log
[2025-11-27 09:48:21] -rw-------. 1 boinc boinc  14213120 Nov 27 09:48 result.tar.gz
[2025-11-27 09:48:21] -rw-r--r--. 1 boinc boinc      8817 Nov 27 09:48 runtime_log.err
[2025-11-27 09:48:21] -rw-------. 1 boinc boinc       662 Nov 27 09:48 6pVLDm0yNh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmhsKKDm3CXRRm.diag
[2025-11-27 09:48:21] -rw-r--r--. 1 boinc boinc     21412 Nov 27 09:48 stderr.txt
[2025-11-27 09:48:21] HITS file was successfully produced:
[2025-11-27 09:48:21] -rw-------. 1 boinc boinc 931709496 Nov 27 09:44 shared/HITS.pool.root.1
[2025-11-27 09:48:21]  *** Contents of shared directory: ***
[2025-11-27 09:48:21] total 1324464
[2025-11-27 09:48:21] -rw-r--r--. 2 boinc boinc 409711379 Nov 26 09:20 ATLAS.root_0
[2025-11-27 09:48:21] -rw-r--r--. 2 boinc boinc     15847 Nov 26 09:20 start_atlas.sh
[2025-11-27 09:48:21] -rw-r--r--. 2 boinc boinc    590100 Nov 26 09:20 input.tar.gz
[2025-11-27 09:48:21] -rw-------. 1 boinc boinc 931709496 Nov 27 09:44 HITS.pool.root.1
[2025-11-27 09:48:21] -rw-------. 1 boinc boinc  14213120 Nov 27 09:48 result.tar.gz
09:48:23 (26049): run_atlas exited; CPU time 327850.362388
09:48:23 (26049): called boinc_finish(0)

</stderr_txt>
]]>

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