Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
00:57:27 (1520654): wrapper (7.7.26015): starting
00:57:27 (1520654): wrapper: running run_atlas (--nthreads 3)
[2025-11-27 00:57:27] Arguments: --nthreads 3
[2025-11-27 00:57:27] Threads: 3
[2025-11-27 00:57:27] Checking for CVMFS
[2025-11-27 00:57:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 00:57:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 00:57:27] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 00:57:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 00:57:27] 2.9.2.0 3958803 11854 93392 153340 2 81 33902321 36864000 0 130560 1 4381750 99.933 587752 733 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-27 00:57:27] CVMFS is ok
[2025-11-27 00:57:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 00:57:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 00:57:27] Further information can be found at the LHC@home message board.
[2025-11-27 00:57:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 00:57:27] Checking for apptainer binary...
[2025-11-27 00:57:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 00:57:27] Running /usr/bin/apptainer --version
[2025-11-27 00:57:27] apptainer version 1.4.1-1.1
[2025-11-27 00:57:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 00:57:27] atlasA223b
[2025-11-27 00:57:27] apptainer works
[2025-11-27 00:57:27] Set ATHENA_PROC_NUMBER=3
[2025-11-27 00:57:27] Set ATHENA_CORE_NUMBER=3
[2025-11-27 00:57:27] Starting ATLAS job with PandaID=6895357310
[2025-11-27 00:57:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 09:12:19]  *** The last 200 lines of the pilot log: ***
[2025-11-27 09:12:19] 2025-11-27 08:11:58,231 | INFO     | ***************************************
[2025-11-27 09:12:19] 2025-11-27 08:11:58,231 | INFO     | 
[2025-11-27 09:12:19] 2025-11-27 08:11:58,232 | INFO     | architecture information:
[2025-11-27 09:12:19] 2025-11-27 08:11:58,232 | INFO     | executing command: cat /etc/os-release
[2025-11-27 09:12:19] 2025-11-27 08:11:58,241 | INFO     | cat /etc/os-release:
[2025-11-27 09:12:19] NAME="CentOS Linux"
[2025-11-27 09:12:19] VERSION="7 (Core)"
[2025-11-27 09:12:19] ID="centos"
[2025-11-27 09:12:19] ID_LIKE="rhel fedora"
[2025-11-27 09:12:19] VERSION_ID="7"
[2025-11-27 09:12:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 09:12:19] ANSI_COLOR="0;31"
[2025-11-27 09:12:19] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 09:12:19] HOME_URL="https://www.centos.org/"
[2025-11-27 09:12:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 09:12:19] 
[2025-11-27 09:12:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 09:12:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 09:12:19] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 09:12:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 09:12:19] 
[2025-11-27 09:12:19] 2025-11-27 08:11:58,242 | INFO     | ***************************************
[2025-11-27 09:12:19] 2025-11-27 08:11:58,744 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-27 09:12:19] 2025-11-27 08:11:58,754 | INFO     | sufficient remaining disk space (367516450816 B)
[2025-11-27 09:12:19] 2025-11-27 08:11:58,755 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 09:12:19] 2025-11-27 08:11:58,755 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 09:12:19] 2025-11-27 08:11:58,755 | INFO     | update_server=False
[2025-11-27 09:12:19] 2025-11-27 08:11:58,755 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 09:12:19] 2025-11-27 08:11:58,755 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 09:12:19] 2025-11-27 08:11:58,755 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 09:12:19] 2025-11-27 08:11:58,755 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 09:12:19] 2025-11-27 08:11:58,755 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-27 09:12:19] 2025-11-27 08:11:58,755 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 09:12:19] 2025-11-27 08:11:58,756 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 09:12:19] 2025-11-27 08:11:58,756 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 09:12:19] 2025-11-27 08:11:59,147 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-27 09:12:19] 2025-11-27 08:11:59,147 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-27 09:12:19] 2025-11-27 08:11:59,148 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 09:12:19] 2025-11-27 08:11:59,148 | INFO     | will abort loop
[2025-11-27 09:12:19] 2025-11-27 08:11:59,217 | INFO     | all payload control threads have been joined
[2025-11-27 09:12:19] 2025-11-27 08:11:59,502 | INFO     | all data control threads have been joined
[2025-11-27 09:12:19] 2025-11-27 08:11:59,622 | INFO     | all job control threads have been joined
[2025-11-27 09:12:19] 2025-11-27 08:11:59,760 | INFO     | [job] retrieve thread has finished
[2025-11-27 09:12:19] 2025-11-27 08:11:59,760 | INFO     | [job] queue monitor thread has finished
[2025-11-27 09:12:19] 2025-11-27 08:11:59,840 | INFO     | [payload] validate_post thread has finished
[2025-11-27 09:12:19] 2025-11-27 08:12:00,038 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 09:12:19] 2025-11-27 08:12:00,153 | INFO     | [job] job monitor thread has finished
[2025-11-27 09:12:19] 2025-11-27 08:12:00,222 | INFO     | [payload] control thread has finished
[2025-11-27 09:12:19] 2025-11-27 08:12:00,507 | INFO     | [data] control thread has finished
[2025-11-27 09:12:19] 2025-11-27 08:12:00,627 | INFO     | [job] control thread has finished
[2025-11-27 09:12:19] 2025-11-27 08:12:00,665 | INFO     | [payload] failed_post thread has finished
[2025-11-27 09:12:19] 2025-11-27 08:12:00,711 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 09:12:19] 2025-11-27 08:12:00,760 | INFO     | [data] copytool_out thread has finished
[2025-11-27 09:12:19] 2025-11-27 08:12:01,113 | INFO     | [data] copytool_in thread has finished
[2025-11-27 09:12:19] 2025-11-27 08:12:01,118 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 09:12:19] 2025-11-27 08:12:01,130 | INFO     | [job] validate thread has finished
[2025-11-27 09:12:19] 2025-11-27 08:12:02,761 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 09:12:19] 2025-11-27 08:12:09,227 | INFO     | job.realtimelogging is not enabled
[2025-11-27 09:12:19] 2025-11-27 08:12:10,232 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 09:12:19] 2025-11-27 08:12:12,547 | INFO     | [monitor] cgroup control has ended
[2025-11-27 09:12:19] 2025-11-27 08:12:14,482 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140496027264832)>', '<ExcThread(monitor, started 140495518934784)>']
[2025-11-27 09:12:19] 2025-11-27 08:12:14,836 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 09:12:19] 2025-11-27 08:12:14,837 | INFO     | [monitor] control thread has ended
[2025-11-27 09:12:19] 2025-11-27 08:12:19,507 | INFO     | all workflow threads have been joined
[2025-11-27 09:12:19] 2025-11-27 08:12:19,507 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 09:12:19] 2025-11-27 08:12:19,507 | INFO     | traces error code: 0
[2025-11-27 09:12:19] 2025-11-27 08:12:19,507 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 09:12:19] 2025-11-27 08:12:19,556 [wrapper] ==== pilot stdout END ====
[2025-11-27 09:12:19] 2025-11-27 08:12:19,558 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 09:12:19] 2025-11-27 08:12:19,561 [wrapper] pilotpid: 1524380
[2025-11-27 09:12:19] 2025-11-27 08:12:19,563 [wrapper] Pilot exit status: 0
[2025-11-27 09:12:19] 2025-11-27 08:12:19,571 [wrapper] pandaids: 6895357310
[2025-11-27 09:12:19] 2025-11-27 08:12:19,591 [wrapper] cleanup supervisor_pilot 1593818 1524381
[2025-11-27 09:12:19] 2025-11-27 08:12:19,594 [wrapper] Test setup, not cleaning
[2025-11-27 09:12:19] 2025-11-27 08:12:19,596 [wrapper] apfmon messages muted
[2025-11-27 09:12:19] 2025-11-27 08:12:19,599 [wrapper] ==== wrapper stdout END ====
[2025-11-27 09:12:19] 2025-11-27 08:12:19,602 [wrapper] ==== wrapper stderr END ====
[2025-11-27 09:12:19]  *** Error codes and diagnostics ***
[2025-11-27 09:12:19]     "exeErrorCode": 0,
[2025-11-27 09:12:19]     "exeErrorDiag": "",
[2025-11-27 09:12:19]     "pilotErrorCode": 0,
[2025-11-27 09:12:19]     "pilotErrorDiag": "",
[2025-11-27 09:12:19]  *** Listing of results directory ***
[2025-11-27 09:12:19] total 1315344
[2025-11-27 09:12:19] -rw-r--r-- 1 boinc boinc      5112 Nov 23 12:56 queuedata.json
[2025-11-27 09:12:19] -rwx------ 1 boinc boinc     36292 Nov 23 12:59 runpilot2-wrapper.sh
[2025-11-27 09:12:19] -rw-r--r-- 1 boinc boinc    576529 Nov 23 12:59 pilot3.tar.gz
[2025-11-27 09:12:19] -rw-r--r-- 1 boinc boinc       100 Nov 27 00:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 09:12:19] -rwxr-xr-x 1 boinc boinc      7986 Nov 27 00:57 run_atlas
[2025-11-27 09:12:19] -rw-r--r-- 1 boinc boinc       105 Nov 27 00:57 job.xml
[2025-11-27 09:12:19] -rw-r--r-- 2 boinc boinc 411794415 Nov 27 00:57 EVNT.47483658._000718.pool.root.1
[2025-11-27 09:12:19] drwxrwx--x 2 boinc boinc      4096 Nov 27 00:57 shared
[2025-11-27 09:12:19] -rw-r--r-- 2 boinc boinc    590096 Nov 27 00:57 input.tar.gz
[2025-11-27 09:12:19] -rw-r--r-- 2 boinc boinc     15847 Nov 27 00:57 start_atlas.sh
[2025-11-27 09:12:19] -rw-r--r-- 1 boinc boinc         0 Nov 27 00:57 boinc_setup_complete
[2025-11-27 09:12:19] -rw-r--r-- 1 boinc boinc      6450 Nov 27 00:57 init_data.xml
[2025-11-27 09:12:19] -rw-r--r-- 1 boinc boinc         0 Nov 27 00:57 boinc_lockfile
[2025-11-27 09:12:19] -rw-r--r-- 1 boinc boinc      2786 Nov 27 00:57 pandaJob.out
[2025-11-27 09:12:19] -rw------- 1 boinc boinc    991538 Nov 27 00:57 agis_schedconf.cvmfs.json
[2025-11-27 09:12:19] drwx------ 5 boinc boinc      4096 Nov 27 00:57 pilot3
[2025-11-27 09:12:19] -rw-r--r-- 1 boinc boinc       531 Nov 27 09:08 boinc_task_state.xml
[2025-11-27 09:12:19] -rw------- 1 boinc boinc        95 Nov 27 09:11 pilot_heartbeat.json
[2025-11-27 09:12:19] -rw------- 1 boinc boinc 920502816 Nov 27 09:11 HITS.47556137._007132.pool.root.1
[2025-11-27 09:12:19] -rw------- 1 boinc boinc      1024 Nov 27 09:11 memory_monitor_summary.json
[2025-11-27 09:12:19] -rw------- 1 boinc boinc   1516240 Nov 27 09:11 agis_ddmendpoints.agis.ALL.json
[2025-11-27 09:12:19] -rw------- 1 boinc boinc   1180839 Nov 27 09:11 log.47556137._007132.job.log.tgz.1
[2025-11-27 09:12:19] -rw------- 1 boinc boinc      8578 Nov 27 09:11 heartbeat.json
[2025-11-27 09:12:19] -rw-r--r-- 1 boinc boinc        28 Nov 27 09:12 wrapper_checkpoint.txt
[2025-11-27 09:12:19] -rw-r--r-- 1 boinc boinc      8192 Nov 27 09:12 boinc_mmap_file
[2025-11-27 09:12:19] -rw------- 1 boinc boinc      4814 Nov 27 09:12 pilotlog.txt
[2025-11-27 09:12:19] -rw------- 1 boinc boinc   4170581 Nov 27 09:12 log.47556137._007132.job.log.1
[2025-11-27 09:12:19] -rw------- 1 boinc boinc       353 Nov 27 09:12 output.list
[2025-11-27 09:12:19] -rw-r--r-- 1 boinc boinc       620 Nov 27 09:12 runtime_log
[2025-11-27 09:12:19] -rw------- 1 boinc boinc   5376000 Nov 27 09:12 result.tar.gz
[2025-11-27 09:12:19] -rw-r--r-- 1 boinc boinc      8918 Nov 27 09:12 runtime_log.err
[2025-11-27 09:12:19] -rw------- 1 boinc boinc       670 Nov 27 09:12 6DyLDmrvNh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm4rKKDmXE2vQm.diag
[2025-11-27 09:12:19] -rw-r--r-- 1 boinc boinc      9379 Nov 27 09:12 stderr.txt
[2025-11-27 09:12:19] HITS file was successfully produced:
[2025-11-27 09:12:19] -rw------- 1 boinc boinc 920502816 Nov 27 09:11 shared/HITS.pool.root.1
[2025-11-27 09:12:19]  *** Contents of shared directory: ***
[2025-11-27 09:12:19] total 1306928
[2025-11-27 09:12:19] -rw-r--r-- 2 boinc boinc 411794415 Nov 27 00:57 ATLAS.root_0
[2025-11-27 09:12:19] -rw-r--r-- 2 boinc boinc    590096 Nov 27 00:57 input.tar.gz
[2025-11-27 09:12:19] -rw-r--r-- 2 boinc boinc     15847 Nov 27 00:57 start_atlas.sh
[2025-11-27 09:12:19] -rw------- 1 boinc boinc 920502816 Nov 27 09:11 HITS.pool.root.1
[2025-11-27 09:12:19] -rw------- 1 boinc boinc   5376000 Nov 27 09:12 result.tar.gz
09:12:21 (1520654): run_atlas exited; CPU time 87686.307940
09:12:21 (1520654): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN