Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
04:12:21 (3619830): wrapper (7.7.26015): starting
04:12:21 (3619830): wrapper: running run_atlas (--nthreads 12)
[2025-11-26 04:12:21] Arguments: --nthreads 12
[2025-11-26 04:12:21] Threads: 12
[2025-11-26 04:12:21] Checking for CVMFS
[2025-11-26 04:12:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 04:12:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 04:12:22] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 04:12:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 04:12:22] 2.11.0.0 7129 7022 132468 153307 0 90 5250436 6144001 12243 130560 0 34757638 99.998 378150 225 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-11-26 04:12:22] CVMFS is ok
[2025-11-26 04:12:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 04:12:22] Checking for apptainer binary...
[2025-11-26 04:12:22] apptainer is not installed, using version from CVMFS
[2025-11-26 04:12:22] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 04:12:22] radiat0r
[2025-11-26 04:12:22] apptainer works
[2025-11-26 04:12:22] Set ATHENA_PROC_NUMBER=12
[2025-11-26 04:12:22] Set ATHENA_CORE_NUMBER=12
[2025-11-26 04:12:22] Starting ATLAS job with PandaID=6895351014
[2025-11-26 04:12:22] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/37 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 08:18:06]  *** The last 200 lines of the pilot log: ***
[2025-11-26 08:18:06] 2025-11-26 08:17:25,253 | INFO     | time since job start (14688s) is within the limit (172800.0s)
[2025-11-26 08:18:06] 2025-11-26 08:17:25,949 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-26 08:18:06] 2025-11-26 08:17:25,981 | INFO     | monitor loop #1017: job 0:6895351014 is in state 'finished'
[2025-11-26 08:18:06] 2025-11-26 08:17:25,981 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 08:18:06] 2025-11-26 08:17:26,009 | INFO     | found 128 cores (64 cores per socket, 2 sockets) HT, CPU MHz: 2808.08013671875
[2025-11-26 08:18:06] 2025-11-26 08:17:26,081 | INFO     | using path: /var/lib/boinc/slots/37/PanDA_Pilot-6895351014/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 08:18:06] 2025-11-26 08:17:26,082 | INFO     | extracted standard info from prmon json
[2025-11-26 08:18:06] 2025-11-26 08:17:26,082 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 08:18:06] 2025-11-26 08:17:26,082 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 08:18:06] 2025-11-26 08:17:26,085 | INFO     | fitting pss+swap vs Time
[2025-11-26 08:18:06] 2025-11-26 08:17:26,085 | INFO     | sum of square deviations: 4340281160.497927
[2025-11-26 08:18:06] 2025-11-26 08:17:26,086 | INFO     | sum of deviations: 86456298736.97105
[2025-11-26 08:18:06] 2025-11-26 08:17:26,086 | INFO     | mean x: 1764137707.954357
[2025-11-26 08:18:06] 2025-11-26 08:17:26,086 | INFO     | mean y: 3420764.3609958505
[2025-11-26 08:18:06] 2025-11-26 08:17:26,086 | INFO     | intersect: -35137348013.52154
[2025-11-26 08:18:06] 2025-11-26 08:17:26,086 | INFO     | chi2: 5.286634449743973
[2025-11-26 08:18:06] 2025-11-26 08:17:26,087 | INFO     | sum of square deviations: 4075769600.8474545
[2025-11-26 08:18:06] 2025-11-26 08:17:26,088 | INFO     | sum of deviations: 170893089169.661
[2025-11-26 08:18:06] 2025-11-26 08:17:26,088 | INFO     | mean x: 1764137555.4745762
[2025-11-26 08:18:06] 2025-11-26 08:17:26,088 | INFO     | mean y: 3469282.1101694917
[2025-11-26 08:18:06] 2025-11-26 08:17:26,088 | INFO     | intersect: -73965117291.71863
[2025-11-26 08:18:06] 2025-11-26 08:17:26,088 | INFO     | chi2: 2.6643765043059493
[2025-11-26 08:18:06] 2025-11-26 08:17:26,088 | INFO     | current chi2=2.6643765043059493 (change=49.60165054659713 %)
[2025-11-26 08:18:06] 2025-11-26 08:17:26,088 | INFO     | sum of square deviations: 3822192171.9307523
[2025-11-26 08:18:06] 2025-11-26 08:17:26,089 | INFO     | sum of deviations: 174657073495.98276
[2025-11-26 08:18:06] 2025-11-26 08:17:26,089 | INFO     | mean x: 1764137402.982684
[2025-11-26 08:18:06] 2025-11-26 08:17:26,089 | INFO     | mean y: 3471449.9956709957
[2025-11-26 08:18:06] 2025-11-26 08:17:26,089 | INFO     | intersect: -80609711296.9395
[2025-11-26 08:18:06] 2025-11-26 08:17:26,090 | INFO     | chi2: 2.561013839808925
[2025-11-26 08:18:06] 2025-11-26 08:17:26,090 | INFO     | current chi2=2.561013839808925 (change=3.879431616739522 %)
[2025-11-26 08:18:06] 2025-11-26 08:17:26,090 | INFO     | right removable region: 230
[2025-11-26 08:18:06] 2025-11-26 08:17:26,090 | INFO     | sum of square deviations: 4075643758.792389
[2025-11-26 08:18:06] 2025-11-26 08:17:26,091 | INFO     | sum of deviations: 5626433519.6102295
[2025-11-26 08:18:06] 2025-11-26 08:17:26,091 | INFO     | mean x: 1764137860.470339
[2025-11-26 08:18:06] 2025-11-26 08:17:26,091 | INFO     | mean y: 3467113.372881356
[2025-11-26 08:18:06] 2025-11-26 08:17:26,091 | INFO     | intersect: -2431928367.390334
[2025-11-26 08:18:06] 2025-11-26 08:17:26,091 | INFO     | chi2: 2.8637886701855457
[2025-11-26 08:18:06] 2025-11-26 08:17:26,091 | INFO     | current chi2=2.8637886701855457 (change=45.82964459885747 %)
[2025-11-26 08:18:06] 2025-11-26 08:17:26,092 | INFO     | sum of square deviations: 3822041138.7879024
[2025-11-26 08:18:06] 2025-11-26 08:17:26,093 | INFO     | sum of deviations: -7345982999.848465
[2025-11-26 08:18:06] 2025-11-26 08:17:26,093 | INFO     | mean x: 1764138012.969697
[2025-11-26 08:18:06] 2025-11-26 08:17:26,093 | INFO     | mean y: 3474887.4502164503
[2025-11-26 08:18:06] 2025-11-26 08:17:26,093 | INFO     | intersect: 3394157347.9670286
[2025-11-26 08:18:06] 2025-11-26 08:17:26,093 | INFO     | chi2: 2.825810013393463
[2025-11-26 08:18:06] 2025-11-26 08:17:26,093 | INFO     | current chi2=2.825810013393463 (change=1.3261682744775345 %)
[2025-11-26 08:18:06] 2025-11-26 08:17:26,093 | INFO     | left removable region: 20
[2025-11-26 08:18:06] 2025-11-26 08:17:26,093 | INFO     | sum of square deviations: 2871616632.5
[2025-11-26 08:18:06] 2025-11-26 08:17:26,094 | INFO     | sum of deviations: 65109951860.00001
[2025-11-26 08:18:06] 2025-11-26 08:17:26,094 | INFO     | mean x: 1764137982.5
[2025-11-26 08:18:06] 2025-11-26 08:17:26,094 | INFO     | mean y: 3540160.1428571427
[2025-11-26 08:18:06] 2025-11-26 08:17:26,094 | INFO     | intersect: -39995858720.26202
[2025-11-26 08:18:06] 2025-11-26 08:17:26,094 | INFO     | chi2: 0.022188243853376123
[2025-11-26 08:18:06] 2025-11-26 08:17:26,094 | INFO     | current memory leak: 22.67 B/s (using 210 data points, chi2=0.02)
[2025-11-26 08:18:06] 2025-11-26 08:17:26,095 | INFO     | could have reported an average CPU frequency of 2846 MHz (12 samples)
[2025-11-26 08:18:06] 2025-11-26 08:17:26,095 | INFO     | ..............................
[2025-11-26 08:18:06] 2025-11-26 08:17:26,095 | INFO     | . Timing measurements:
[2025-11-26 08:18:06] 2025-11-26 08:17:26,095 | INFO     | . get job = 0 s
[2025-11-26 08:18:06] 2025-11-26 08:17:26,095 | INFO     | . initial setup = 3 s
[2025-11-26 08:18:06] 2025-11-26 08:17:26,095 | INFO     | . payload setup = 7 s
[2025-11-26 08:18:06] 2025-11-26 08:17:26,095 | INFO     | . stage-in = 0 s
[2025-11-26 08:18:06] 2025-11-26 08:17:26,095 | INFO     | . payload execution = 14650 s
[2025-11-26 08:18:06] 2025-11-26 08:17:26,095 | INFO     | . stage-out = 4 s
[2025-11-26 08:18:06] 2025-11-26 08:17:26,095 | INFO     | . log creation = 0 s
[2025-11-26 08:18:06] 2025-11-26 08:17:26,095 | INFO     | ..............................
[2025-11-26 08:18:06] 2025-11-26 08:17:26,154 | INFO     | 
[2025-11-26 08:18:06] 2025-11-26 08:17:26,154 | INFO     | job summary report
[2025-11-26 08:18:06] 2025-11-26 08:17:26,154 | INFO     | --------------------------------------------------
[2025-11-26 08:18:06] 2025-11-26 08:17:26,154 | INFO     | PanDA job id: 6895351014
[2025-11-26 08:18:06] 2025-11-26 08:17:26,154 | INFO     | task id: 47556137
[2025-11-26 08:18:06] 2025-11-26 08:17:26,154 | INFO     | errors: (none)
[2025-11-26 08:18:06] 2025-11-26 08:17:26,155 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 08:18:06] 2025-11-26 08:17:26,155 | INFO     | pilot state: finished 
[2025-11-26 08:18:06] 2025-11-26 08:17:26,155 | INFO     | transexitcode: 0
[2025-11-26 08:18:06] 2025-11-26 08:17:26,155 | INFO     | exeerrorcode: 0
[2025-11-26 08:18:06] 2025-11-26 08:17:26,155 | INFO     | exeerrordiag: 
[2025-11-26 08:18:06] 2025-11-26 08:17:26,155 | INFO     | exitcode: 0
[2025-11-26 08:18:06] 2025-11-26 08:17:26,155 | INFO     | exitmsg: OK
[2025-11-26 08:18:06] 2025-11-26 08:17:26,155 | INFO     | cpuconsumptiontime: 170840 s
[2025-11-26 08:18:06] 2025-11-26 08:17:26,155 | INFO     | nevents: 1000
[2025-11-26 08:18:06] 2025-11-26 08:17:26,155 | INFO     | neventsw: 0
[2025-11-26 08:18:06] 2025-11-26 08:17:26,155 | INFO     | pid: 3633070
[2025-11-26 08:18:06] 2025-11-26 08:17:26,155 | INFO     | pgrp: 3633070
[2025-11-26 08:18:06] 2025-11-26 08:17:26,155 | INFO     | corecount: 12
[2025-11-26 08:18:06] 2025-11-26 08:17:26,155 | INFO     | event service: False
[2025-11-26 08:18:06] 2025-11-26 08:17:26,156 | INFO     | sizes: {0: 2284258, 6: 2284520, 11: 2284548, 14661: 2316732, 14665: 2325728, 14666: 2325784, 14671: 2326158}
[2025-11-26 08:18:06] 2025-11-26 08:17:26,156 | INFO     | --------------------------------------------------
[2025-11-26 08:18:06] 2025-11-26 08:17:26,156 | INFO     | 
[2025-11-26 08:18:06] 2025-11-26 08:17:26,156 | INFO     | executing command: ls -lF /var/lib/boinc/slots/37
[2025-11-26 08:18:06] 2025-11-26 08:17:26,180 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 08:18:06] 2025-11-26 08:17:26,181 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 08:18:06] 2025-11-26 08:17:26,181 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 08:18:06] 2025-11-26 08:17:26,181 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 08:18:06] 2025-11-26 08:17:26,181 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 08:18:06] 2025-11-26 08:17:26,181 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 08:18:06] 2025-11-26 08:17:26,181 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 08:18:06] 2025-11-26 08:17:26,181 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 08:18:06] 2025-11-26 08:17:26,181 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 08:18:06] 2025-11-26 08:17:26,181 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 08:18:06] 2025-11-26 08:17:26,181 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 08:18:06] 2025-11-26 08:17:26,181 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 08:18:06] 2025-11-26 08:17:26,181 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 08:18:06] 2025-11-26 08:17:26,181 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 08:18:06] 2025-11-26 08:17:26,181 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 08:18:06] 2025-11-26 08:17:26,181 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 08:18:06] 2025-11-26 08:17:26,181 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 08:18:06] 2025-11-26 08:17:26,182 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 08:18:06] 2025-11-26 08:17:26,182 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 08:18:06] 2025-11-26 08:17:26,182 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 08:18:06] 2025-11-26 08:17:26,182 | INFO     | job 6895351014 has completed (purged errors)
[2025-11-26 08:18:06] 2025-11-26 08:17:26,182 | INFO     | overall cleanup function is called
[2025-11-26 08:18:06] 2025-11-26 08:17:27,201 | INFO     | --- collectZombieJob: --- 10, [3633070]
[2025-11-26 08:18:06] 2025-11-26 08:17:27,201 | INFO     | zombie collector waiting for pid 3633070
[2025-11-26 08:18:06] 2025-11-26 08:17:27,201 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 08:18:06] 2025-11-26 08:17:27,201 | INFO     | collected zombie processes
[2025-11-26 08:18:06] 2025-11-26 08:17:27,201 | INFO     | will attempt to kill all subprocesses of pid=3633070
[2025-11-26 08:18:06] 2025-11-26 08:17:27,753 | INFO     | process IDs to be killed: [3633070] (in reverse order)
[2025-11-26 08:18:06] 2025-11-26 08:17:27,981 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 08:18:06] 2025-11-26 08:17:27,981 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 08:18:06] 2025-11-26 08:17:28,002 | INFO     | did not find any defunct processes belonging to 3633070
[2025-11-26 08:18:06] 2025-11-26 08:17:28,017 | INFO     | did not find any defunct processes belonging to 3633070
[2025-11-26 08:18:06] 2025-11-26 08:17:28,019 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 08:18:06] 2025-11-26 08:17:28,019 | INFO     | ready for new job
[2025-11-26 08:18:06] 2025-11-26 08:17:28,019 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 08:18:06] 2025-11-26 08:17:28,021 | INFO     | ***************************************
[2025-11-26 08:18:06] 2025-11-26 08:17:28,021 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 08:18:06] 2025-11-26 08:17:28,021 | INFO     | ***************************************
[2025-11-26 08:18:06] 2025-11-26 08:17:28,021 | INFO     | 
[2025-11-26 08:18:06] 2025-11-26 08:17:28,062 | INFO     | architecture information:
[2025-11-26 08:18:06] 2025-11-26 08:17:28,062 | INFO     | executing command: cat /etc/os-release
[2025-11-26 08:18:06] 2025-11-26 08:17:28,082 | INFO     | cat /etc/os-release:
[2025-11-26 08:18:06] NAME="CentOS Linux"
[2025-11-26 08:18:06] VERSION="7 (Core)"
[2025-11-26 08:18:06] ID="centos"
[2025-11-26 08:18:06] ID_LIKE="rhel fedora"
[2025-11-26 08:18:06] VERSION_ID="7"
[2025-11-26 08:18:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 08:18:06] ANSI_COLOR="0;31"
[2025-11-26 08:18:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 08:18:06] HOME_URL="https://www.centos.org/"
[2025-11-26 08:18:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 08:18:06] 
[2025-11-26 08:18:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 08:18:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 08:18:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 08:18:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 08:18:06] 
[2025-11-26 08:18:06] 2025-11-26 08:17:28,082 | INFO     | ***************************************
[2025-11-26 08:18:06] 2025-11-26 08:17:28,585 | INFO     | executing command: df -mP /var/lib/boinc/slots/37
[2025-11-26 08:18:06] 2025-11-26 08:17:28,609 | INFO     | sufficient remaining disk space (294033293312 B)
[2025-11-26 08:18:06] 2025-11-26 08:17:28,610 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 08:18:06] 2025-11-26 08:17:28,610 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 08:18:06] 2025-11-26 08:17:28,610 | INFO     | update_server=False
[2025-11-26 08:18:06] 2025-11-26 08:17:28,610 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 08:18:06] 2025-11-26 08:17:28,610 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 08:18:06] 2025-11-26 08:17:28,678 | INFO     | all data control threads have been joined
[2025-11-26 08:18:06] 2025-11-26 08:17:29,489 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 08:18:06] 2025-11-26 08:17:29,489 | INFO     | aborting loop
[2025-11-26 08:18:06] 2025-11-26 08:17:29,616 | INFO     | [job] retrieve thread has finished
[2025-11-26 08:18:06] 2025-11-26 08:17:29,667 | INFO     | all job control threads have been joined
[2025-11-26 08:18:06] 2025-11-26 08:17:29,684 | INFO     | [data] control thread has finished
[2025-11-26 08:18:06] 2025-11-26 08:17:29,780 | INFO     | [payload] validate_post thread has finished
[2025-11-26 08:18:06] 2025-11-26 08:17:29,873 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 08:18:06] 2025-11-26 08:17:29,930 | INFO     | [data] copytool_in thread has finished
[2025-11-26 08:18:06] 2025-11-26 08:17:29,944 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 08:18:06] 2025-11-26 08:17:29,944 | INFO     | [job] validate thread has finished
[2025-11-26 08:18:06] 2025-11-26 08:17:30,009 | INFO     | all payload control threads have been joined
[2025-11-26 08:18:06] 2025-11-26 08:17:30,360 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 08:18:06] 2025-11-26 08:17:30,495 | INFO     | [job] job monitor thread has finished
[2025-11-26 08:18:06] 2025-11-26 08:17:30,603 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 08:18:06] 2025-11-26 08:17:30,616 | INFO     | [data] copytool_out thread has finished
[2025-11-26 08:18:06] 2025-11-26 08:17:30,673 | INFO     | [job] control thread has finished
[2025-11-26 08:18:06] 2025-11-26 08:17:30,813 | INFO     | [payload] failed_post thread has finished
[2025-11-26 08:18:06] 2025-11-26 08:17:31,014 | INFO     | [payload] control thread has finished
[2025-11-26 08:18:06] 2025-11-26 08:17:31,165 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 08:18:06] 2025-11-26 08:17:31,183 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 08:18:06] 2025-11-26 08:17:32,171 | INFO     | [job] queue monitor thread has finished
[2025-11-26 08:18:06] 2025-11-26 08:17:35,189 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 08:18:06] 2025-11-26 08:17:59,147 | INFO     | PID=3624869 has CPU usage=9.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 08:18:06] 2025-11-26 08:17:59,148 | INFO     | .. there are 3 such processes running
[2025-11-26 08:18:06] 2025-11-26 08:17:59,148 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 08:18:06] 2025-11-26 08:17:59,148 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 08:18:06] 2025-11-26 08:17:59,148 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 08:18:06] 2025-11-26 08:18:01,006 | INFO     | [monitor] cgroup control has ended
[2025-11-26 08:18:06] 2025-11-26 08:18:01,092 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139628296849216)>', '<ExcThread(monitor, started 139627616782080)>']
[2025-11-26 08:18:06] 2025-11-26 08:18:01,157 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 08:18:06] 2025-11-26 08:18:01,157 | INFO     | [monitor] control thread has ended
[2025-11-26 08:18:06] 2025-11-26 08:18:06,117 | INFO     | all workflow threads have been joined
[2025-11-26 08:18:06] 2025-11-26 08:18:06,117 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 08:18:06] 2025-11-26 08:18:06,117 | INFO     | traces error code: 0
[2025-11-26 08:18:06] 2025-11-26 08:18:06,118 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 08:18:06] 2025-11-26 08:18:06,226 [wrapper] ==== pilot stdout END ====
[2025-11-26 08:18:06] 2025-11-26 08:18:06,230 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 08:18:06] 2025-11-26 08:18:06,233 [wrapper] pilotpid: 3624869
[2025-11-26 08:18:06] 2025-11-26 08:18:06,236 [wrapper] Pilot exit status: 0
[2025-11-26 08:18:06] 2025-11-26 08:18:06,249 [wrapper] pandaids: 6895351014
[2025-11-26 08:18:06] 2025-11-26 08:18:06,376 [wrapper] cleanup supervisor_pilot 3841580 3624870
[2025-11-26 08:18:06] 2025-11-26 08:18:06,379 [wrapper] Test setup, not cleaning
[2025-11-26 08:18:06] 2025-11-26 08:18:06,382 [wrapper] apfmon messages muted
[2025-11-26 08:18:06] 2025-11-26 08:18:06,384 [wrapper] ==== wrapper stdout END ====
[2025-11-26 08:18:06] 2025-11-26 08:18:06,387 [wrapper] ==== wrapper stderr END ====
[2025-11-26 08:18:06]  *** Error codes and diagnostics ***
[2025-11-26 08:18:06]     "exeErrorCode": 0,
[2025-11-26 08:18:06]     "exeErrorDiag": "",
[2025-11-26 08:18:06]     "pilotErrorCode": 0,
[2025-11-26 08:18:06]     "pilotErrorDiag": "",
[2025-11-26 08:18:06]  *** Listing of results directory ***
[2025-11-26 08:18:06] total 1314044
[2025-11-26 08:18:06] -rw-r--r-- 1 boinc boinc    576529 Nov 22 22:51 pilot3.tar.gz
[2025-11-26 08:18:06] -rwx------ 1 boinc boinc     36292 Nov 22 22:52 runpilot2-wrapper.sh
[2025-11-26 08:18:06] -rw-r--r-- 1 boinc boinc      5112 Nov 22 22:52 queuedata.json
[2025-11-26 08:18:06] -rw-r--r-- 1 boinc boinc       100 Nov 26 04:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 08:18:06] -rwxr-xr-x 1 boinc boinc      7986 Nov 26 04:12 run_atlas
[2025-11-26 08:18:06] -rw-r--r-- 1 boinc boinc       105 Nov 26 04:12 job.xml
[2025-11-26 08:18:06] -rw-r--r-- 2 boinc boinc 407379611 Nov 26 04:12 EVNT.47483658._000534.pool.root.1
[2025-11-26 08:18:06] -rw-r--r-- 2 boinc boinc     15847 Nov 26 04:12 start_atlas.sh
[2025-11-26 08:18:06] drwxrwx--x 2 boinc boinc      4096 Nov 26 04:12 shared
[2025-11-26 08:18:06] -rw-r--r-- 2 boinc boinc    590097 Nov 26 04:12 input.tar.gz
[2025-11-26 08:18:06] -rw-r--r-- 1 boinc boinc      9415 Nov 26 04:12 init_data.xml
[2025-11-26 08:18:06] -rw-r--r-- 1 boinc boinc         0 Nov 26 04:12 boinc_setup_complete
[2025-11-26 08:18:06] -rw-r--r-- 1 boinc boinc         0 Nov 26 04:12 boinc_lockfile
[2025-11-26 08:18:06] -rw-r--r-- 1 boinc boinc      2781 Nov 26 04:12 pandaJob.out
[2025-11-26 08:18:06] -rw------- 1 boinc boinc    991877 Nov 26 04:12 agis_schedconf.cvmfs.json
[2025-11-26 08:18:06] drwx------ 5 boinc boinc      4096 Nov 26 04:12 pilot3
[2025-11-26 08:18:06] -rw-r--r-- 1 boinc boinc       533 Nov 26 08:10 boinc_task_state.xml
[2025-11-26 08:18:06] -rw------- 1 boinc boinc 926126531 Nov 26 08:16 HITS.47556137._005291.pool.root.1
[2025-11-26 08:18:06] -rw------- 1 boinc boinc        95 Nov 26 08:17 pilot_heartbeat.json
[2025-11-26 08:18:06] -rw------- 1 boinc boinc      1050 Nov 26 08:17 memory_monitor_summary.json
[2025-11-26 08:18:06] -rw------- 1 boinc boinc   1516240 Nov 26 08:17 agis_ddmendpoints.agis.ALL.json
[2025-11-26 08:18:06] -rw------- 1 boinc boinc   2013766 Nov 26 08:17 log.47556137._005291.job.log.tgz.1
[2025-11-26 08:18:06] -rw------- 1 boinc boinc      8566 Nov 26 08:17 heartbeat.json
[2025-11-26 08:18:06] -rw-r--r-- 1 boinc boinc        29 Nov 26 08:17 wrapper_checkpoint.txt
[2025-11-26 08:18:06] -rw-r--r-- 1 boinc boinc      8192 Nov 26 08:17 boinc_mmap_file
[2025-11-26 08:18:06] -rw------- 1 boinc boinc      4825 Nov 26 08:18 pilotlog.txt
[2025-11-26 08:18:06] -rw------- 1 boinc boinc   2060917 Nov 26 08:18 log.47556137._005291.job.log.1
[2025-11-26 08:18:06] -rw------- 1 boinc boinc       353 Nov 26 08:18 output.list
[2025-11-26 08:18:06] -rw-r--r-- 1 boinc boinc       620 Nov 26 08:18 runtime_log
[2025-11-26 08:18:06] -rw------- 1 boinc boinc   4096000 Nov 26 08:18 result.tar.gz
[2025-11-26 08:18:06] -rw------- 1 boinc boinc       652 Nov 26 08:18 UCiKDmWeBh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmYRKKDmSas0Fo.diag
[2025-11-26 08:18:06] -rw-r--r-- 1 boinc boinc      8789 Nov 26 08:18 runtime_log.err
[2025-11-26 08:18:06] -rw-r--r-- 1 boinc boinc     21021 Nov 26 08:18 stderr.txt
[2025-11-26 08:18:06] HITS file was successfully produced:
[2025-11-26 08:18:06] -rw------- 1 boinc boinc 926126531 Nov 26 08:16 shared/HITS.pool.root.1
[2025-11-26 08:18:06]  *** Contents of shared directory: ***
[2025-11-26 08:18:06] total 1306860
[2025-11-26 08:18:06] -rw-r--r-- 2 boinc boinc 407379611 Nov 26 04:12 ATLAS.root_0
[2025-11-26 08:18:06] -rw-r--r-- 2 boinc boinc     15847 Nov 26 04:12 start_atlas.sh
[2025-11-26 08:18:06] -rw-r--r-- 2 boinc boinc    590097 Nov 26 04:12 input.tar.gz
[2025-11-26 08:18:06] -rw------- 1 boinc boinc 926126531 Nov 26 08:16 HITS.pool.root.1
[2025-11-26 08:18:06] -rw------- 1 boinc boinc   4096000 Nov 26 08:18 result.tar.gz
08:18:07 (3619830): run_atlas exited; CPU time 170981.132709
08:18:07 (3619830): called boinc_finish(0)

</stderr_txt>
]]>

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