Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:31:47 (1556388): wrapper (7.7.26015): starting
22:31:47 (1556388): wrapper: running run_atlas (--nthreads 12)
[2025-11-23 22:31:47] Arguments: --nthreads 12
[2025-11-23 22:31:47] Threads: 12
[2025-11-23 22:31:47] Checking for CVMFS
[2025-11-23 22:31:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 22:31:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 22:31:48] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 22:31:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 22:31:50] 2.11.5.0 4091557 24862 192968 153236 2 132 28276444 45568000 17637 130560 0 192116902 99.754 136831718 22944 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-11-23 22:31:50] CVMFS is ok
[2025-11-23 22:31:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 22:31:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 22:31:50] Further information can be found at the LHC@home message board.
[2025-11-23 22:31:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 22:31:50] Checking for apptainer binary...
[2025-11-23 22:31:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 22:31:50] Running /usr/bin/apptainer --version
[2025-11-23 22:31:51] apptainer version 1.4.1-1.el9
[2025-11-23 22:31:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 22:31:52] wns0073.triumf.lcg
[2025-11-23 22:31:52] apptainer works
[2025-11-23 22:31:52] Set ATHENA_PROC_NUMBER=12
[2025-11-23 22:31:52] Set ATHENA_CORE_NUMBER=12
[2025-11-23 22:31:52] Starting ATLAS job with PandaID=6895369827
[2025-11-23 22:31:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 22:41:56]  *** The last 200 lines of the pilot log: ***
[2025-11-23 22:41:56] 2025-11-24 06:41:17,013 | WARNING  | wrong length of table data, x=[1763966126.0, 1763966187.0, 1763966248.0, 1763966309.0], y=[7858.0, 49994.0, 751653.0, 739688.0] (must be same and length>=4)
[2025-11-23 22:41:56] 2025-11-24 06:41:17,014 | INFO     | could have reported an average CPU frequency of 1352 MHz (4 samples)
[2025-11-23 22:41:56] 2025-11-24 06:41:17,014 | INFO     | ..............................
[2025-11-23 22:41:56] 2025-11-24 06:41:17,014 | INFO     | . Timing measurements:
[2025-11-23 22:41:56] 2025-11-24 06:41:17,014 | INFO     | . get job = 1 s
[2025-11-23 22:41:56] 2025-11-24 06:41:17,015 | INFO     | . initial setup = 5 s
[2025-11-23 22:41:56] 2025-11-24 06:41:17,015 | INFO     | . payload setup = 41 s
[2025-11-23 22:41:56] 2025-11-24 06:41:17,015 | INFO     | . stage-in = 0 s
[2025-11-23 22:41:56] 2025-11-24 06:41:17,015 | INFO     | . payload execution = 244 s
[2025-11-23 22:41:56] 2025-11-24 06:41:17,033 | INFO     | . stage-out = 1 s
[2025-11-23 22:41:56] 2025-11-24 06:41:17,033 | INFO     | . log creation = 0 s
[2025-11-23 22:41:56] 2025-11-24 06:41:17,033 | INFO     | ..............................
[2025-11-23 22:41:56] 2025-11-24 06:41:17,034 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-23 22:41:56] 2025-11-24 06:41:17,034 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6895369827/pilotlog.txt
[2025-11-23 22:41:56] 2025-11-24 06:41:17,169 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-11-23 22:41:56] - Log from pilotlog.txt -
[2025-11-23 22:41:56] 2025-11-24 06:41:16,990 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6895369827/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 22:41:56] 2025-11-24 06:41:17,011 | INFO     | extracted standard info from prmon json
[2025-11-23 22:41:56] 2025-11-24 06:41:17,011 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 22:41:56] 2025-11-24 06:41:17,012 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 22:41:56] 2025-11-24 06:41:17,012 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-23 22:41:56] 2025-11-24 06:41:17,012 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-23 22:41:56] 2025-11-24 06:41:17,013 | WARNING  | wrong length of table data, x=[1763966126.0, 1763966187.0, 1763966248.0, 1763966309.0], y=[7858.0, 49994.0, 751653.0, 739688.0] (must be same and length>=4)
[2025-11-23 22:41:56] 2025-11-24 06:41:17,014 | INFO     | could have reported an average CPU frequency of 1352 MHz (4 samples)
[2025-11-23 22:41:56] 2025-11-24 06:41:17,014 | INFO     | ..............................
[2025-11-23 22:41:56] 2025-11-24 06:41:17,014 | INFO     | . Timing measurements:
[2025-11-23 22:41:56] 2025-11-24 06:41:17,014 | INFO     | . get job = 1 s
[2025-11-23 22:41:56] 2025-11-24 06:41:17,015 | INFO     | . initial setup = 5 s
[2025-11-23 22:41:56] 2025-11-24 06:41:17,015 | INFO     | . payload setup = 41 s
[2025-11-23 22:41:56] 2025-11-24 06:41:17,015 | INFO     | . stage-in = 0 s
[2025-11-23 22:41:56] 2025-11-24 06:41:17,015 | INFO     | . payload execution = 244 s
[2025-11-23 22:41:56] 2025-11-24 06:41:17,033 | INFO     | . stage-out = 1 s
[2025-11-23 22:41:56] 2025-11-24 06:41:17,033 | INFO     | . log creation = 0 s
[2025-11-23 22:41:56] 2025-11-24 06:41:17,033 | INFO     | ..............................
[2025-11-23 22:41:56] 2025-11-24 06:41:17,034 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-23 22:41:56] 2025-11-24 06:41:17,034 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6895369827/pilotlog.txt
[2025-11-23 22:41:56] 2025-11-24 06:41:17,169 | WARNING  | 
[2025-11-23 22:41:56] [begin log extracts]
[2025-11-23 22:41:56] - Log from pilotlog.txt -
[2025-11-23 22:41:56] 2025-11-24 06:41:16,990 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6895369827/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 22:41:56] 2025-11-24 06:41:17,011 | INFO     | extracted standard info from prmon json
[2025-11-23 22:41:56] 2025-11-24 06:41:17,011 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 22:41:56] 2025-11-24 06:41:17,012 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 22:41:56] 2025-11-24 06:41:17,012 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-23 22:41:56] 2025-11-24 06:41:17,012 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-23 22:41:56] 2025-11-24 06:41:17,013 | WARNING  | wrong length of table data, x=[1763966126.0, 1763966187.0, 1763966248.0, 1763966309.0], y=[7858.0, 49994.0, 751653.0, 739688.0] (must be same and length>=4)
[2025-11-23 22:41:56] 2025-11-24 06:41:17,014 | INFO     | could have reported an average CPU frequency of 1352 MHz (4 samples)
[2025-11-23 22:41:56] 2025-11-24 06:41:17,014 | INFO     | ..............................
[2025-11-23 22:41:56] 2025-11-24 06:41:17,014 | INFO     | . Timing measurements:
[2025-11-23 22:41:56] 2025-11-24 06:41:17,014 | INFO     | . get job = 1 s
[2025-11-23 22:41:56] 2025-11-24 06:41:17,015 | INFO     | . initial setup = 5 s
[2025-11-23 22:41:56] 2025-11-24 06:41:17,015 | INFO     | . payload setup = 41 s
[2025-11-23 22:41:56] 2025-11-24 06:41:17,015 | INFO     | . stage-in = 0 s
[2025-11-23 22:41:56] 2025-11-24 06:41:17,015 | INFO     | . payload execution = 244 s
[2025-11-23 22:41:56] 2025-11-24 06:41:17,033 | INFO     | . stage-out = 1 s
[2025-11-23 22:41:56] 2025-11-24 06:41:17,033 | INFO     | . log creation = 0 s
[2025-11-23 22:41:56] 2025-11-24 06:41:17,033 | INFO     | ..............................
[2025-11-23 22:41:56] 2025-11-24 06:41:17,034 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-23 22:41:56] 2025-11-24 06:41:17,034 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6895369827/pilotlog.txt
[2025-11-23 22:41:56] [end log extracts]
[2025-11-23 22:41:56] 2025-11-24 06:41:17,169 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2025-11-23 22:41:56] 2025-11-24 06:41:17,171 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-11-23 22:41:56] 2025-11-24 06:41:17,776 | INFO     | time since job start (507s) is within the limit (172800.0s)
[2025-11-23 22:41:56] 2025-11-24 06:41:17,977 | INFO     | 
[2025-11-23 22:41:56] 2025-11-24 06:41:17,977 | INFO     | job summary report
[2025-11-23 22:41:56] 2025-11-24 06:41:17,978 | INFO     | --------------------------------------------------
[2025-11-23 22:41:56] 2025-11-24 06:41:17,978 | INFO     | PanDA job id: 6895369827
[2025-11-23 22:41:56] 2025-11-24 06:41:17,978 | INFO     | task id: 47556137
[2025-11-23 22:41:56] 2025-11-24 06:41:17,978 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-11-23 22:38:36,963 CRITICAL Transform executor raised TransformValidationExceptio
[2025-11-23 22:41:56] 2025-11-24 06:41:17,978 | INFO     | error 2/2: 1165: Local output file is missing
[2025-11-23 22:41:56] 2025-11-24 06:41:17,978 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 22:41:56] 2025-11-24 06:41:17,978 | INFO     | pilot state: failed 
[2025-11-23 22:41:56] 2025-11-24 06:41:17,978 | INFO     | transexitcode: 65
[2025-11-23 22:41:56] 2025-11-24 06:41:17,978 | INFO     | exeerrorcode: 65
[2025-11-23 22:41:56] 2025-11-24 06:41:17,978 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFL
[2025-11-23 22:41:56] 2025-11-24 06:41:17,979 | INFO     | exitcode: 65
[2025-11-23 22:41:56] 2025-11-24 06:41:17,979 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 
[2025-11-23 22:41:56] 2025-11-24 06:41:17,979 | INFO     | cpuconsumptiontime: 80 s
[2025-11-23 22:41:56] 2025-11-24 06:41:17,979 | INFO     | nevents: 0
[2025-11-23 22:41:56] 2025-11-24 06:41:17,979 | INFO     | neventsw: 0
[2025-11-23 22:41:56] 2025-11-24 06:41:17,979 | INFO     | pid: 1567058
[2025-11-23 22:41:56] 2025-11-24 06:41:17,979 | INFO     | pgrp: 1567058
[2025-11-23 22:41:56] 2025-11-24 06:41:17,979 | INFO     | corecount: 12
[2025-11-23 22:41:56] 2025-11-24 06:41:17,979 | INFO     | event service: False
[2025-11-23 22:41:56] 2025-11-24 06:41:17,979 | INFO     | sizes: {0: 2297979, 1: 2298661, 2: 2298689, 3: 2298860, 4: 2298888, 5: 2298916, 16: 2299100, 26: 2299128, 31: 2299418, 37: 2299446, 291: 2325207, 295: 2329553, 441
[2025-11-23 22:41:56] 2025-11-24 06:41:17,980 | INFO     | --------------------------------------------------
[2025-11-23 22:41:56] 2025-11-24 06:41:17,980 | INFO     | 
[2025-11-23 22:41:56] 2025-11-24 06:41:17,980 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-11-23 22:41:56] 2025-11-24 06:41:18,076 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 22:41:56] 2025-11-24 06:41:18,077 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 22:41:56] 2025-11-24 06:41:18,077 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 22:41:56] 2025-11-24 06:41:18,077 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 22:41:56] 2025-11-24 06:41:18,077 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 22:41:56] 2025-11-24 06:41:18,077 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 22:41:56] 2025-11-24 06:41:18,078 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 22:41:56] 2025-11-24 06:41:18,078 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 22:41:56] 2025-11-24 06:41:18,078 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 22:41:56] 2025-11-24 06:41:18,078 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 22:41:56] 2025-11-24 06:41:18,078 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 22:41:56] 2025-11-24 06:41:18,078 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 22:41:56] 2025-11-24 06:41:18,078 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 22:41:56] 2025-11-24 06:41:18,079 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 22:41:56] 2025-11-24 06:41:18,079 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 22:41:56] 2025-11-24 06:41:18,079 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 22:41:56] 2025-11-24 06:41:18,079 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 22:41:56] 2025-11-24 06:41:18,079 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 22:41:56] 2025-11-24 06:41:18,079 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 22:41:56] 2025-11-24 06:41:18,079 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 22:41:56] 2025-11-24 06:41:18,079 | INFO     | job 6895369827 has completed (purged errors)
[2025-11-23 22:41:56] 2025-11-24 06:41:18,080 | INFO     | overall cleanup function is called
[2025-11-23 22:41:56] 2025-11-24 06:41:19,095 | INFO     | --- collectZombieJob: --- 10, [1567058]
[2025-11-23 22:41:56] 2025-11-24 06:41:19,095 | INFO     | zombie collector waiting for pid 1567058
[2025-11-23 22:41:56] 2025-11-24 06:41:19,095 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 22:41:56] 2025-11-24 06:41:19,096 | INFO     | collected zombie processes
[2025-11-23 22:41:56] 2025-11-24 06:41:19,096 | INFO     | will attempt to kill all subprocesses of pid=1567058
[2025-11-23 22:41:56] 2025-11-24 06:41:20,643 | INFO     | process IDs to be killed: [1567058] (in reverse order)
[2025-11-23 22:41:56] 2025-11-24 06:41:20,855 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 22:41:56] 2025-11-24 06:41:20,855 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 22:41:56] 2025-11-24 06:41:20,907 | INFO     | did not find any defunct processes belonging to 1567058
[2025-11-23 22:41:56] 2025-11-24 06:41:20,948 | INFO     | did not find any defunct processes belonging to 1567058
[2025-11-23 22:41:56] 2025-11-24 06:41:20,949 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 22:41:56] 2025-11-24 06:41:20,950 | INFO     | ready for new job
[2025-11-23 22:41:56] 2025-11-24 06:41:20,950 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 22:41:56] 2025-11-24 06:41:20,952 | INFO     | ***************************************
[2025-11-23 22:41:56] 2025-11-24 06:41:20,972 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 22:41:56] 2025-11-24 06:41:20,972 | INFO     | ***************************************
[2025-11-23 22:41:56] 2025-11-24 06:41:20,972 | INFO     | 
[2025-11-23 22:41:56] 2025-11-24 06:41:20,976 | INFO     | architecture information:
[2025-11-23 22:41:56] 2025-11-24 06:41:20,988 | INFO     | executing command: cat /etc/os-release
[2025-11-23 22:41:56] 2025-11-24 06:41:21,072 | INFO     | cat /etc/os-release:
[2025-11-23 22:41:56] NAME="CentOS Linux"
[2025-11-23 22:41:56] VERSION="7 (Core)"
[2025-11-23 22:41:56] ID="centos"
[2025-11-23 22:41:56] ID_LIKE="rhel fedora"
[2025-11-23 22:41:56] VERSION_ID="7"
[2025-11-23 22:41:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 22:41:56] ANSI_COLOR="0;31"
[2025-11-23 22:41:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 22:41:56] HOME_URL="https://www.centos.org/"
[2025-11-23 22:41:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 22:41:56] 
[2025-11-23 22:41:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 22:41:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 22:41:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 22:41:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 22:41:56] 
[2025-11-23 22:41:56] 2025-11-24 06:41:21,073 | INFO     | ***************************************
[2025-11-23 22:41:56] 2025-11-24 06:41:21,576 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-11-23 22:41:56] 2025-11-24 06:41:21,760 | INFO     | sufficient remaining disk space (632713904128 B)
[2025-11-23 22:41:56] 2025-11-24 06:41:21,761 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 22:41:56] 2025-11-24 06:41:21,761 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 22:41:56] 2025-11-24 06:41:21,761 | INFO     | update_server=False
[2025-11-23 22:41:56] 2025-11-24 06:41:21,762 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 22:41:56] 2025-11-24 06:41:21,763 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 22:41:56] 2025-11-24 06:41:21,891 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 22:41:56] 2025-11-24 06:41:22,031 | INFO     | all data control threads have been joined
[2025-11-23 22:41:56] 2025-11-24 06:41:22,236 | INFO     | all job control threads have been joined
[2025-11-23 22:41:56] 2025-11-24 06:41:22,614 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 22:41:56] 2025-11-24 06:41:22,729 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 22:41:56] 2025-11-24 06:41:22,729 | INFO     | aborting loop
[2025-11-23 22:41:56] 2025-11-24 06:41:22,767 | INFO     | [job] retrieve thread has finished
[2025-11-23 22:41:56] 2025-11-24 06:41:22,850 | INFO     | all payload control threads have been joined
[2025-11-23 22:41:56] 2025-11-24 06:41:23,033 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 22:41:56] 2025-11-24 06:41:23,041 | INFO     | [data] control thread has finished
[2025-11-23 22:41:56] 2025-11-24 06:41:23,091 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 22:41:56] 2025-11-24 06:41:23,238 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 22:41:56] 2025-11-24 06:41:23,242 | INFO     | [job] control thread has finished
[2025-11-23 22:41:56] 2025-11-24 06:41:23,375 | INFO     | [payload] validate_post thread has finished
[2025-11-23 22:41:56] 2025-11-24 06:41:23,413 | INFO     | [job] validate thread has finished
[2025-11-23 22:41:56] 2025-11-24 06:41:23,620 | INFO     | [job] queue monitor thread has finished
[2025-11-23 22:41:56] 2025-11-24 06:41:23,735 | INFO     | [job] job monitor thread has finished
[2025-11-23 22:41:56] 2025-11-24 06:41:23,856 | INFO     | [payload] control thread has finished
[2025-11-23 22:41:56] 2025-11-24 06:41:23,902 | INFO     | [data] copytool_out thread has finished
[2025-11-23 22:41:56] 2025-11-24 06:41:24,113 | INFO     | [data] copytool_in thread has finished
[2025-11-23 22:41:56] 2025-11-24 06:41:24,221 | INFO     | [payload] failed_post thread has finished
[2025-11-23 22:41:56] 2025-11-24 06:41:24,238 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 22:41:56] 2025-11-24 06:41:25,772 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 22:41:56] 2025-11-24 06:41:49,910 | INFO     | [monitor] cgroup control has ended
[2025-11-23 22:41:56] 2025-11-24 06:41:50,196 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140083350689600)>', '<ExcThread(monitor, started 140082791028480)>']
[2025-11-23 22:41:56] 2025-11-24 06:41:52,569 | INFO     | PID=1560184 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-23 22:41:56] 2025-11-24 06:41:52,569 | INFO     | .. there are 28 such processes running
[2025-11-23 22:41:56] 2025-11-24 06:41:52,571 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 22:41:56] 2025-11-24 06:41:52,571 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 22:41:56] 2025-11-24 06:41:52,571 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 22:41:56] 2025-11-24 06:41:52,571 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 22:41:56] 2025-11-24 06:41:52,571 | INFO     | [monitor] control thread has ended
[2025-11-23 22:41:56] 2025-11-24 06:41:55,222 | INFO     | all workflow threads have been joined
[2025-11-23 22:41:56] 2025-11-24 06:41:55,222 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 22:41:56] 2025-11-24 06:41:55,223 | INFO     | traces error code: 0
[2025-11-23 22:41:56] 2025-11-24 06:41:55,223 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 22:41:56] 2025-11-24 06:41:55,823 [wrapper] ==== pilot stdout END ====
[2025-11-23 22:41:56] 2025-11-24 06:41:55,849 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 22:41:56] 2025-11-24 06:41:55,852 [wrapper] pilotpid: 1560184
[2025-11-23 22:41:56] 2025-11-24 06:41:55,856 [wrapper] Pilot exit status: 0
[2025-11-23 22:41:56] 2025-11-24 06:41:55,920 [wrapper] pandaids: 6895369827
[2025-11-23 22:41:56] 2025-11-24 06:41:56,105 [wrapper] cleanup supervisor_pilot 1560190 1560185
[2025-11-23 22:41:56] 2025-11-24 06:41:56,111 [wrapper] Test setup, not cleaning
[2025-11-23 22:41:56] 2025-11-24 06:41:56,116 [wrapper] apfmon messages muted
[2025-11-23 22:41:56] 2025-11-24 06:41:56,120 [wrapper] ==== wrapper stdout END ====
[2025-11-23 22:41:56] 2025-11-24 06:41:56,124 [wrapper] ==== wrapper stderr END ====
[2025-11-23 22:41:56]  *** Error codes and diagnostics ***
[2025-11-23 22:41:56]     "exeErrorCode": 65,
[2025-11-23 22:41:56]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 cannot be opened - STOP\"",
[2025-11-23 22:41:56]     "pilotErrorCode": 1305,
[2025-11-23 22:41:56]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 canno",
[2025-11-23 22:41:56]  *** Listing of results directory ***
[2025-11-23 22:41:56] total 403604
[2025-11-23 22:41:56] -rw-r--r--. 1 boinc boinc    576529 Nov 23 12:16 pilot3.tar.gz
[2025-11-23 22:41:56] -rwx------. 1 boinc boinc     36292 Nov 23 12:27 runpilot2-wrapper.sh
[2025-11-23 22:41:56] -rw-r--r--. 1 boinc boinc      5112 Nov 23 12:27 queuedata.json
[2025-11-23 22:41:56] -rw-r--r--. 1 boinc boinc       100 Nov 23 22:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 22:41:56] -rwxr-xr-x. 1 boinc boinc      7986 Nov 23 22:31 run_atlas
[2025-11-23 22:41:56] -rw-r--r--. 1 boinc boinc       105 Nov 23 22:31 job.xml
[2025-11-23 22:41:56] -rw-r--r--. 2 boinc boinc 409022161 Nov 23 22:31 EVNT.47483658._000890.pool.root.1
[2025-11-23 22:41:56] -rw-r--r--. 1 boinc boinc      6593 Nov 23 22:31 init_data.xml
[2025-11-23 22:41:56] -rw-r--r--. 2 boinc boinc    590102 Nov 23 22:31 input.tar.gz
[2025-11-23 22:41:56] -rw-r--r--. 2 boinc boinc     15847 Nov 23 22:31 start_atlas.sh
[2025-11-23 22:41:56] drwxrwx--x. 2 boinc boinc      4096 Nov 23 22:31 shared
[2025-11-23 22:41:56] -rw-r--r--. 1 boinc boinc         0 Nov 23 22:31 boinc_lockfile
[2025-11-23 22:41:56] -rw-r--r--. 1 boinc boinc      2786 Nov 23 22:31 pandaJob.out
[2025-11-23 22:41:56] -rw-------. 1 boinc boinc    989786 Nov 23 22:32 agis_schedconf.cvmfs.json
[2025-11-23 22:41:56] -rw-------. 1 boinc boinc   1526164 Nov 23 22:32 agis_ddmendpoints.agis.ALL.json
[2025-11-23 22:41:56] drwx------. 5 boinc boinc      4096 Nov 23 22:32 pilot3
[2025-11-23 22:41:56] -rw-r--r--. 1 boinc boinc       524 Nov 23 22:37 boinc_task_state.xml
[2025-11-23 22:41:56] -rw-------. 1 boinc boinc      1002 Nov 23 22:38 memory_monitor_summary.json
[2025-11-23 22:41:56] -rw-------. 1 boinc boinc     51261 Nov 23 22:38 log.47556137._008770.job.log.tgz.1
[2025-11-23 22:41:56] -rw-------. 1 boinc boinc     10340 Nov 23 22:41 heartbeat.json
[2025-11-23 22:41:56] -rw-------. 1 boinc boinc        95 Nov 23 22:41 pilot_heartbeat.json
[2025-11-23 22:41:56] -rw-r--r--. 1 boinc boinc        23 Nov 23 22:41 wrapper_checkpoint.txt
[2025-11-23 22:41:56] -rw-r--r--. 1 boinc boinc      8192 Nov 23 22:41 boinc_mmap_file
[2025-11-23 22:41:56] -rw-------. 1 boinc boinc      4822 Nov 23 22:41 pilotlog.txt
[2025-11-23 22:41:56] -rw-------. 1 boinc boinc    123098 Nov 23 22:41 log.47556137._008770.job.log.1
[2025-11-23 22:41:56] -rw-------. 1 boinc boinc       186 Nov 23 22:41 output.list
[2025-11-23 22:41:56] -rw-r--r--. 1 boinc boinc       620 Nov 23 22:41 runtime_log
[2025-11-23 22:41:56] -rw-------. 1 boinc boinc    194560 Nov 23 22:41 result.tar.gz
[2025-11-23 22:41:56] -rw-r--r--. 1 boinc boinc      8636 Nov 23 22:41 runtime_log.err
[2025-11-23 22:41:56] -rw-------. 1 boinc boinc       644 Nov 23 22:41 fX3LDmFrVh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmUkIKDmgWsu5m.diag
[2025-11-23 22:41:56] -rw-r--r--. 1 boinc boinc     22696 Nov 23 22:41 stderr.txt
[2025-11-23 22:41:56] No HITS result produced
[2025-11-23 22:41:56]  *** Contents of shared directory: ***
[2025-11-23 22:41:56] total 400228
[2025-11-23 22:41:56] -rw-r--r--. 2 boinc boinc 409022161 Nov 23 22:31 ATLAS.root_0
[2025-11-23 22:41:56] -rw-r--r--. 2 boinc boinc    590102 Nov 23 22:31 input.tar.gz
[2025-11-23 22:41:56] -rw-r--r--. 2 boinc boinc     15847 Nov 23 22:31 start_atlas.sh
[2025-11-23 22:41:56] -rw-------. 1 boinc boinc    194560 Nov 23 22:41 result.tar.gz
22:41:57 (1556388): run_atlas exited; CPU time 89.514328
22:41:57 (1556388): called boinc_finish(0)

</stderr_txt>
]]>

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