Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
06:05:49 (3738370): wrapper (7.7.26015): starting
06:05:49 (3738370): wrapper: running run_atlas (--nthreads 12)
[2025-11-26 06:05:49] Arguments: --nthreads 12
[2025-11-26 06:05:49] Threads: 12
[2025-11-26 06:05:49] Checking for CVMFS
[2025-11-26 06:05:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 06:05:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 06:05:49] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 06:05:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 06:05:50] 2.11.0.0 7129 7135 132604 153311 3 90 5272309 6144000 12243 130560 0 35088901 99.998 383501 225 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-11-26 06:05:50] CVMFS is ok
[2025-11-26 06:05:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 06:05:50] Checking for apptainer binary...
[2025-11-26 06:05:50] apptainer is not installed, using version from CVMFS
[2025-11-26 06:05:50] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 06:05:50] radiat0r
[2025-11-26 06:05:50] apptainer works
[2025-11-26 06:05:50] Set ATHENA_PROC_NUMBER=12
[2025-11-26 06:05:50] Set ATHENA_CORE_NUMBER=12
[2025-11-26 06:05:50] Starting ATLAS job with PandaID=6895351006
[2025-11-26 06:05:50] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 09:52:30]  *** The last 200 lines of the pilot log: ***
[2025-11-26 09:52:30] 2025-11-26 09:51:24,271 | INFO     | .. there are 3 such processes running
[2025-11-26 09:52:30] 2025-11-26 09:51:24,689 | INFO     | monitor loop #942: job 0:6895351006 is in state 'finished'
[2025-11-26 09:52:30] 2025-11-26 09:51:24,689 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 09:52:30] 2025-11-26 09:51:24,959 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-26 09:52:30] 2025-11-26 09:51:25,016 | INFO     | found 128 cores (64 cores per socket, 2 sockets) HT, CPU MHz: 2852.39476953125
[2025-11-26 09:52:30] 2025-11-26 09:51:25,107 | INFO     | using path: /var/lib/boinc/slots/4/PanDA_Pilot-6895351006/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 09:52:30] 2025-11-26 09:51:25,108 | INFO     | extracted standard info from prmon json
[2025-11-26 09:52:30] 2025-11-26 09:51:25,108 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 09:52:30] 2025-11-26 09:51:25,108 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 09:52:30] 2025-11-26 09:51:25,112 | INFO     | fitting pss+swap vs Time
[2025-11-26 09:52:30] 2025-11-26 09:51:25,112 | INFO     | sum of square deviations: 3346954479.113127
[2025-11-26 09:52:30] 2025-11-26 09:51:25,113 | INFO     | sum of deviations: 123415119245.81453
[2025-11-26 09:52:30] 2025-11-26 09:51:25,113 | INFO     | mean x: 1764143902.9366515
[2025-11-26 09:52:30] 2025-11-26 09:51:25,113 | INFO     | mean y: 3386677.3438914027
[2025-11-26 09:52:30] 2025-11-26 09:51:25,113 | INFO     | intersect: -65047402482.29691
[2025-11-26 09:52:30] 2025-11-26 09:51:25,113 | INFO     | chi2: 4.525766918784802
[2025-11-26 09:52:30] 2025-11-26 09:51:25,114 | INFO     | sum of square deviations: 3124948329.625002
[2025-11-26 09:52:30] 2025-11-26 09:51:25,114 | INFO     | sum of deviations: 192555035198.8751
[2025-11-26 09:52:30] 2025-11-26 09:51:25,114 | INFO     | mean x: 1764143750.4583333
[2025-11-26 09:52:30] 2025-11-26 09:51:25,115 | INFO     | mean y: 3434020.8194444445
[2025-11-26 09:52:30] 2025-11-26 09:51:25,115 | INFO     | intersect: -108700687178.5681
[2025-11-26 09:52:30] 2025-11-26 09:51:25,115 | INFO     | chi2: 2.311311336556849
[2025-11-26 09:52:30] 2025-11-26 09:51:25,115 | INFO     | current chi2=2.311311336556849 (change=48.92995202728091 %)
[2025-11-26 09:52:30] 2025-11-26 09:51:25,115 | INFO     | sum of square deviations: 2912923004.616109
[2025-11-26 09:52:30] 2025-11-26 09:51:25,116 | INFO     | sum of deviations: 186549823317.93842
[2025-11-26 09:52:30] 2025-11-26 09:51:25,116 | INFO     | mean x: 1764143597.957346
[2025-11-26 09:52:30] 2025-11-26 09:51:25,116 | INFO     | mean y: 3429670.104265403
[2025-11-26 09:52:30] 2025-11-26 09:51:25,116 | INFO     | intersect: -112976101881.15515
[2025-11-26 09:52:30] 2025-11-26 09:51:25,116 | INFO     | chi2: 2.2955076318502043
[2025-11-26 09:52:30] 2025-11-26 09:51:25,116 | INFO     | current chi2=2.2955076318502043 (change=0.683754908163403 %)
[2025-11-26 09:52:30] 2025-11-26 09:51:25,116 | INFO     | right removable region: 210
[2025-11-26 09:52:30] 2025-11-26 09:51:25,116 | INFO     | sum of square deviations: 3124848657.439818
[2025-11-26 09:52:30] 2025-11-26 09:51:25,117 | INFO     | sum of deviations: 55624363671.467636
[2025-11-26 09:52:30] 2025-11-26 09:51:25,117 | INFO     | mean x: 1764144055.449074
[2025-11-26 09:52:30] 2025-11-26 09:51:25,117 | INFO     | mean y: 3432920.087962963
[2025-11-26 09:52:30] 2025-11-26 09:51:25,117 | INFO     | intersect: -31399492874.58213
[2025-11-26 09:52:30] 2025-11-26 09:51:25,117 | INFO     | chi2: 2.3448799502826
[2025-11-26 09:52:30] 2025-11-26 09:51:25,117 | INFO     | current chi2=2.3448799502826 (change=48.188229920770745 %)
[2025-11-26 09:52:30] 2025-11-26 09:51:25,118 | INFO     | sum of square deviations: 2912829432.4265337
[2025-11-26 09:52:30] 2025-11-26 09:51:25,118 | INFO     | sum of deviations: 40357889598.7867
[2025-11-26 09:52:30] 2025-11-26 09:51:25,118 | INFO     | mean x: 1764144207.9478674
[2025-11-26 09:52:30] 2025-11-26 09:51:25,118 | INFO     | mean y: 3443887.5260663508
[2025-11-26 09:52:30] 2025-11-26 09:51:25,119 | INFO     | intersect: -24439160402.347588
[2025-11-26 09:52:30] 2025-11-26 09:51:25,119 | INFO     | chi2: 2.3041796687464964
[2025-11-26 09:52:30] 2025-11-26 09:51:25,119 | INFO     | current chi2=2.3041796687464964 (change=1.7357085394157763 %)
[2025-11-26 09:52:30] 2025-11-26 09:51:25,119 | INFO     | left removable region: 20
[2025-11-26 09:52:30] 2025-11-26 09:51:25,119 | INFO     | sum of square deviations: 2126833415.4157908
[2025-11-26 09:52:30] 2025-11-26 09:51:25,120 | INFO     | sum of deviations: 80988033289.17899
[2025-11-26 09:52:30] 2025-11-26 09:51:25,120 | INFO     | mean x: 1764144177.4789474
[2025-11-26 09:52:30] 2025-11-26 09:51:25,120 | INFO     | mean y: 3510071.294736842
[2025-11-26 09:52:30] 2025-11-26 09:51:25,120 | INFO     | intersect: -67173621121.48589
[2025-11-26 09:52:30] 2025-11-26 09:51:25,120 | INFO     | chi2: 0.0161198116673379
[2025-11-26 09:52:30] 2025-11-26 09:51:25,120 | INFO     | current memory leak: 38.08 B/s (using 190 data points, chi2=0.02)
[2025-11-26 09:52:30] 2025-11-26 09:51:25,120 | INFO     | could have reported an average CPU frequency of 2868 MHz (11 samples)
[2025-11-26 09:52:30] 2025-11-26 09:51:25,120 | INFO     | ..............................
[2025-11-26 09:52:30] 2025-11-26 09:51:25,120 | INFO     | . Timing measurements:
[2025-11-26 09:52:30] 2025-11-26 09:51:25,120 | INFO     | . get job = 0 s
[2025-11-26 09:52:30] 2025-11-26 09:51:25,120 | INFO     | . initial setup = 1 s
[2025-11-26 09:52:30] 2025-11-26 09:51:25,121 | INFO     | . payload setup = 7 s
[2025-11-26 09:52:30] 2025-11-26 09:51:25,121 | INFO     | . stage-in = 0 s
[2025-11-26 09:52:30] 2025-11-26 09:51:25,121 | INFO     | . payload execution = 13483 s
[2025-11-26 09:52:30] 2025-11-26 09:51:25,121 | INFO     | . stage-out = 2 s
[2025-11-26 09:52:30] 2025-11-26 09:51:25,121 | INFO     | . log creation = 0 s
[2025-11-26 09:52:30] 2025-11-26 09:51:25,121 | INFO     | ..............................
[2025-11-26 09:52:30] 2025-11-26 09:51:25,177 | INFO     | 
[2025-11-26 09:52:30] 2025-11-26 09:51:25,177 | INFO     | job summary report
[2025-11-26 09:52:30] 2025-11-26 09:51:25,177 | INFO     | --------------------------------------------------
[2025-11-26 09:52:30] 2025-11-26 09:51:25,177 | INFO     | PanDA job id: 6895351006
[2025-11-26 09:52:30] 2025-11-26 09:51:25,177 | INFO     | task id: 47556137
[2025-11-26 09:52:30] 2025-11-26 09:51:25,177 | INFO     | errors: (none)
[2025-11-26 09:52:30] 2025-11-26 09:51:25,177 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 09:52:30] 2025-11-26 09:51:25,177 | INFO     | pilot state: finished 
[2025-11-26 09:52:30] 2025-11-26 09:51:25,177 | INFO     | transexitcode: 0
[2025-11-26 09:52:30] 2025-11-26 09:51:25,178 | INFO     | exeerrorcode: 0
[2025-11-26 09:52:30] 2025-11-26 09:51:25,178 | INFO     | exeerrordiag: 
[2025-11-26 09:52:30] 2025-11-26 09:51:25,178 | INFO     | exitcode: 0
[2025-11-26 09:52:30] 2025-11-26 09:51:25,178 | INFO     | exitmsg: OK
[2025-11-26 09:52:30] 2025-11-26 09:51:25,178 | INFO     | cpuconsumptiontime: 156619 s
[2025-11-26 09:52:30] 2025-11-26 09:51:25,178 | INFO     | nevents: 1000
[2025-11-26 09:52:30] 2025-11-26 09:51:25,178 | INFO     | neventsw: 0
[2025-11-26 09:52:30] 2025-11-26 09:51:25,178 | INFO     | pid: 3751650
[2025-11-26 09:52:30] 2025-11-26 09:51:25,178 | INFO     | pgrp: 3751650
[2025-11-26 09:52:30] 2025-11-26 09:51:25,178 | INFO     | corecount: 12
[2025-11-26 09:52:30] 2025-11-26 09:51:25,178 | INFO     | event service: False
[2025-11-26 09:52:30] 2025-11-26 09:51:25,178 | INFO     | sizes: {0: 2283385, 1: 2284241, 7: 2284503, 12: 2284531, 13495: 2315741, 13498: 2324735, 13500: 2324919, 13506: 2325193}
[2025-11-26 09:52:30] 2025-11-26 09:51:25,178 | INFO     | --------------------------------------------------
[2025-11-26 09:52:30] 2025-11-26 09:51:25,178 | INFO     | 
[2025-11-26 09:52:30] 2025-11-26 09:51:25,178 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2025-11-26 09:52:30] 2025-11-26 09:51:25,209 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 09:52:30] 2025-11-26 09:51:25,209 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 09:52:30] 2025-11-26 09:51:25,209 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 09:52:30] 2025-11-26 09:51:25,209 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 09:52:30] 2025-11-26 09:51:25,209 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 09:52:30] 2025-11-26 09:51:25,209 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 09:52:30] 2025-11-26 09:51:25,210 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 09:52:30] 2025-11-26 09:51:25,210 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 09:52:30] 2025-11-26 09:51:25,210 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 09:52:30] 2025-11-26 09:51:25,210 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 09:52:30] 2025-11-26 09:51:25,210 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 09:52:30] 2025-11-26 09:51:25,210 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 09:52:30] 2025-11-26 09:51:25,210 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 09:52:30] 2025-11-26 09:51:25,210 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 09:52:30] 2025-11-26 09:51:25,210 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 09:52:30] 2025-11-26 09:51:25,210 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 09:52:30] 2025-11-26 09:51:25,210 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 09:52:30] 2025-11-26 09:51:25,210 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 09:52:30] 2025-11-26 09:51:25,210 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 09:52:30] 2025-11-26 09:51:25,210 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 09:52:30] 2025-11-26 09:51:25,210 | INFO     | job 6895351006 has completed (purged errors)
[2025-11-26 09:52:30] 2025-11-26 09:51:25,210 | INFO     | overall cleanup function is called
[2025-11-26 09:52:30] 2025-11-26 09:51:26,228 | INFO     | --- collectZombieJob: --- 10, [3751650]
[2025-11-26 09:52:30] 2025-11-26 09:51:26,229 | INFO     | zombie collector waiting for pid 3751650
[2025-11-26 09:52:30] 2025-11-26 09:51:26,229 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 09:52:30] 2025-11-26 09:51:26,229 | INFO     | collected zombie processes
[2025-11-26 09:52:30] 2025-11-26 09:51:26,229 | INFO     | will attempt to kill all subprocesses of pid=3751650
[2025-11-26 09:52:30] 2025-11-26 09:51:26,739 | INFO     | process IDs to be killed: [3751650] (in reverse order)
[2025-11-26 09:52:30] 2025-11-26 09:51:26,932 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 09:52:30] 2025-11-26 09:51:26,933 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 09:52:30] 2025-11-26 09:51:26,953 | INFO     | did not find any defunct processes belonging to 3751650
[2025-11-26 09:52:30] 2025-11-26 09:51:26,967 | INFO     | did not find any defunct processes belonging to 3751650
[2025-11-26 09:52:30] 2025-11-26 09:51:26,969 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 09:52:30] 2025-11-26 09:51:26,970 | INFO     | ready for new job
[2025-11-26 09:52:30] 2025-11-26 09:51:26,970 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 09:52:30] 2025-11-26 09:51:26,971 | INFO     | ***************************************
[2025-11-26 09:52:30] 2025-11-26 09:51:26,972 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 09:52:30] 2025-11-26 09:51:26,972 | INFO     | ***************************************
[2025-11-26 09:52:30] 2025-11-26 09:51:26,972 | INFO     | 
[2025-11-26 09:52:30] 2025-11-26 09:51:27,015 | INFO     | architecture information:
[2025-11-26 09:52:30] 2025-11-26 09:51:27,016 | INFO     | executing command: cat /etc/os-release
[2025-11-26 09:52:30] 2025-11-26 09:51:27,033 | INFO     | cat /etc/os-release:
[2025-11-26 09:52:30] NAME="CentOS Linux"
[2025-11-26 09:52:30] VERSION="7 (Core)"
[2025-11-26 09:52:30] ID="centos"
[2025-11-26 09:52:30] ID_LIKE="rhel fedora"
[2025-11-26 09:52:30] VERSION_ID="7"
[2025-11-26 09:52:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 09:52:30] ANSI_COLOR="0;31"
[2025-11-26 09:52:30] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 09:52:30] HOME_URL="https://www.centos.org/"
[2025-11-26 09:52:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 09:52:30] 
[2025-11-26 09:52:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 09:52:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 09:52:30] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 09:52:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 09:52:30] 
[2025-11-26 09:52:30] 2025-11-26 09:51:27,034 | INFO     | ***************************************
[2025-11-26 09:52:30] 2025-11-26 09:51:27,537 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2025-11-26 09:52:30] 2025-11-26 09:51:27,562 | INFO     | sufficient remaining disk space (269736738816 B)
[2025-11-26 09:52:30] 2025-11-26 09:51:27,563 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 09:52:30] 2025-11-26 09:51:27,563 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 09:52:30] 2025-11-26 09:51:27,563 | INFO     | update_server=False
[2025-11-26 09:52:30] 2025-11-26 09:51:27,563 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 09:52:30] 2025-11-26 09:51:27,563 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 09:52:30] 2025-11-26 09:51:28,127 | INFO     | all job control threads have been joined
[2025-11-26 09:52:30] 2025-11-26 09:51:28,197 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 09:52:30] 2025-11-26 09:51:28,197 | INFO     | aborting loop
[2025-11-26 09:52:30] 2025-11-26 09:51:28,421 | INFO     | all payload control threads have been joined
[2025-11-26 09:52:30] 2025-11-26 09:51:28,569 | INFO     | [job] retrieve thread has finished
[2025-11-26 09:52:30] 2025-11-26 09:51:28,620 | INFO     | all data control threads have been joined
[2025-11-26 09:52:30] 2025-11-26 09:51:28,641 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 09:52:30] 2025-11-26 09:51:28,641 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 09:52:30] 2025-11-26 09:51:28,778 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 09:52:30] 2025-11-26 09:51:28,817 | INFO     | [data] copytool_in thread has finished
[2025-11-26 09:52:30] 2025-11-26 09:51:28,874 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 09:52:30] 2025-11-26 09:51:29,129 | INFO     | [job] control thread has finished
[2025-11-26 09:52:30] 2025-11-26 09:51:29,203 | INFO     | [job] job monitor thread has finished
[2025-11-26 09:52:30] 2025-11-26 09:51:29,427 | INFO     | [payload] control thread has finished
[2025-11-26 09:52:30] 2025-11-26 09:51:29,487 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 09:52:30] 2025-11-26 09:51:29,565 | INFO     | [data] copytool_out thread has finished
[2025-11-26 09:52:30] 2025-11-26 09:51:29,626 | INFO     | [data] control thread has finished
[2025-11-26 09:52:30] 2025-11-26 09:51:29,635 | INFO     | [payload] validate_post thread has finished
[2025-11-26 09:52:30] 2025-11-26 09:51:29,739 | INFO     | [job] validate thread has finished
[2025-11-26 09:52:30] 2025-11-26 09:51:29,912 | INFO     | [payload] failed_post thread has finished
[2025-11-26 09:52:30] 2025-11-26 09:51:30,188 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 09:52:30] 2025-11-26 09:51:31,193 | INFO     | [job] queue monitor thread has finished
[2025-11-26 09:52:30] 2025-11-26 09:51:33,493 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 09:52:30] 2025-11-26 09:51:56,951 | INFO     | PID=3743082 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 09:52:30] 2025-11-26 09:51:56,951 | INFO     | .. there are 3 such processes running
[2025-11-26 09:52:30] 2025-11-26 09:51:56,952 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 09:52:30] 2025-11-26 09:51:56,952 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 09:52:30] 2025-11-26 09:51:56,952 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 09:52:30] 2025-11-26 09:52:24,250 | INFO     | [monitor] cgroup control has ended
[2025-11-26 09:52:30] 2025-11-26 09:52:25,030 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139956575029056)>', '<ExcThread(monitor, started 139955871414016)>']
[2025-11-26 09:52:30] 2025-11-26 09:52:25,087 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 09:52:30] 2025-11-26 09:52:25,087 | INFO     | [monitor] control thread has ended
[2025-11-26 09:52:30] 2025-11-26 09:52:30,056 | INFO     | all workflow threads have been joined
[2025-11-26 09:52:30] 2025-11-26 09:52:30,056 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 09:52:30] 2025-11-26 09:52:30,056 | INFO     | traces error code: 0
[2025-11-26 09:52:30] 2025-11-26 09:52:30,057 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 09:52:30] 2025-11-26 09:52:30,212 [wrapper] ==== pilot stdout END ====
[2025-11-26 09:52:30] 2025-11-26 09:52:30,217 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 09:52:30] 2025-11-26 09:52:30,219 [wrapper] pilotpid: 3743082
[2025-11-26 09:52:30] 2025-11-26 09:52:30,222 [wrapper] Pilot exit status: 0
[2025-11-26 09:52:30] 2025-11-26 09:52:30,232 [wrapper] pandaids: 6895351006
[2025-11-26 09:52:30] 2025-11-26 09:52:30,351 [wrapper] cleanup supervisor_pilot 3945402 3743083
[2025-11-26 09:52:30] 2025-11-26 09:52:30,353 [wrapper] Test setup, not cleaning
[2025-11-26 09:52:30] 2025-11-26 09:52:30,356 [wrapper] apfmon messages muted
[2025-11-26 09:52:30] 2025-11-26 09:52:30,358 [wrapper] ==== wrapper stdout END ====
[2025-11-26 09:52:30] 2025-11-26 09:52:30,360 [wrapper] ==== wrapper stderr END ====
[2025-11-26 09:52:30]  *** Error codes and diagnostics ***
[2025-11-26 09:52:30]     "exeErrorCode": 0,
[2025-11-26 09:52:30]     "exeErrorDiag": "",
[2025-11-26 09:52:30]     "pilotErrorCode": 0,
[2025-11-26 09:52:30]     "pilotErrorDiag": "",
[2025-11-26 09:52:30]  *** Listing of results directory ***
[2025-11-26 09:52:30] total 1324624
[2025-11-26 09:52:30] -rwx------ 1 boinc boinc     36292 Nov 22 22:51 runpilot2-wrapper.sh
[2025-11-26 09:52:30] -rw-r--r-- 1 boinc boinc      5112 Nov 22 22:51 queuedata.json
[2025-11-26 09:52:30] -rw-r--r-- 1 boinc boinc    576529 Nov 22 22:51 pilot3.tar.gz
[2025-11-26 09:52:30] -rw-r--r-- 1 boinc boinc       100 Nov 26 06:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 09:52:30] -rwxr-xr-x 1 boinc boinc      7986 Nov 26 06:05 run_atlas
[2025-11-26 09:52:30] -rw-r--r-- 1 boinc boinc       105 Nov 26 06:05 job.xml
[2025-11-26 09:52:30] -rw-r--r-- 2 boinc boinc 409351747 Nov 26 06:05 EVNT.47483658._000533.pool.root.1
[2025-11-26 09:52:30] -rw-r--r-- 2 boinc boinc     15847 Nov 26 06:05 start_atlas.sh
[2025-11-26 09:52:30] drwxrwx--x 2 boinc boinc      4096 Nov 26 06:05 shared
[2025-11-26 09:52:30] -rw-r--r-- 2 boinc boinc    590094 Nov 26 06:05 input.tar.gz
[2025-11-26 09:52:30] -rw-r--r-- 1 boinc boinc      9414 Nov 26 06:05 init_data.xml
[2025-11-26 09:52:30] -rw-r--r-- 1 boinc boinc         0 Nov 26 06:05 boinc_setup_complete
[2025-11-26 09:52:30] -rw-r--r-- 1 boinc boinc         0 Nov 26 06:05 boinc_lockfile
[2025-11-26 09:52:30] -rw-r--r-- 1 boinc boinc      2784 Nov 26 06:05 pandaJob.out
[2025-11-26 09:52:30] -rw------- 1 boinc boinc    991877 Nov 26 06:06 agis_schedconf.cvmfs.json
[2025-11-26 09:52:30] drwx------ 5 boinc boinc      4096 Nov 26 06:06 pilot3
[2025-11-26 09:52:30] -rw-r--r-- 1 boinc boinc       532 Nov 26 09:45 boinc_task_state.xml
[2025-11-26 09:52:30] -rw------- 1 boinc boinc 935333753 Nov 26 09:50 HITS.47556137._005283.pool.root.1
[2025-11-26 09:52:30] -rw------- 1 boinc boinc      1035 Nov 26 09:51 memory_monitor_summary.json
[2025-11-26 09:52:30] -rw------- 1 boinc boinc   1516240 Nov 26 09:51 agis_ddmendpoints.agis.ALL.json
[2025-11-26 09:52:30] -rw------- 1 boinc boinc   2005560 Nov 26 09:51 log.47556137._005283.job.log.tgz.1
[2025-11-26 09:52:30] -rw------- 1 boinc boinc        95 Nov 26 09:51 pilot_heartbeat.json
[2025-11-26 09:52:30] -rw------- 1 boinc boinc      8555 Nov 26 09:51 heartbeat.json
[2025-11-26 09:52:30] -rw-r--r-- 1 boinc boinc      8192 Nov 26 09:52 boinc_mmap_file
[2025-11-26 09:52:30] -rw-r--r-- 1 boinc boinc        29 Nov 26 09:52 wrapper_checkpoint.txt
[2025-11-26 09:52:30] -rw------- 1 boinc boinc      4824 Nov 26 09:52 pilotlog.txt
[2025-11-26 09:52:30] -rw------- 1 boinc boinc   1899837 Nov 26 09:52 log.47556137._005283.job.log.1
[2025-11-26 09:52:30] -rw------- 1 boinc boinc       353 Nov 26 09:52 output.list
[2025-11-26 09:52:30] -rw-r--r-- 1 boinc boinc       620 Nov 26 09:52 runtime_log
[2025-11-26 09:52:30] -rw------- 1 boinc boinc   3921920 Nov 26 09:52 result.tar.gz
[2025-11-26 09:52:30] -rw-r--r-- 1 boinc boinc      8773 Nov 26 09:52 runtime_log.err
[2025-11-26 09:52:30] -rw------- 1 boinc boinc       651 Nov 26 09:52 MqtNDmFdBh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmkLIKDm7qyh9m.diag
[2025-11-26 09:52:30] -rw-r--r-- 1 boinc boinc     21012 Nov 26 09:52 stderr.txt
[2025-11-26 09:52:30] HITS file was successfully produced:
[2025-11-26 09:52:30] -rw------- 1 boinc boinc 935333753 Nov 26 09:50 shared/HITS.pool.root.1
[2025-11-26 09:52:30]  *** Contents of shared directory: ***
[2025-11-26 09:52:30] total 1317608
[2025-11-26 09:52:30] -rw-r--r-- 2 boinc boinc 409351747 Nov 26 06:05 ATLAS.root_0
[2025-11-26 09:52:30] -rw-r--r-- 2 boinc boinc     15847 Nov 26 06:05 start_atlas.sh
[2025-11-26 09:52:30] -rw-r--r-- 2 boinc boinc    590094 Nov 26 06:05 input.tar.gz
[2025-11-26 09:52:30] -rw------- 1 boinc boinc 935333753 Nov 26 09:50 HITS.pool.root.1
[2025-11-26 09:52:30] -rw------- 1 boinc boinc   3921920 Nov 26 09:52 result.tar.gz
09:52:31 (3738370): run_atlas exited; CPU time 156721.997021
09:52:31 (3738370): called boinc_finish(0)

</stderr_txt>
]]>

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