Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
00:51:22 (27136): wrapper (7.7.26015): starting
00:51:22 (27136): wrapper: running run_atlas (--nthreads 8)
[2025-11-24 00:51:22] Arguments: --nthreads 8
[2025-11-24 00:51:22] Threads: 8
[2025-11-24 00:51:22] Checking for CVMFS
[2025-11-24 00:51:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 00:51:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 00:51:22] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 00:51:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 00:51:22] 2.11.2.0 2857 64359 85940 153235 2 82 15546616 20275200 1 130560 0 16947011 99.847 3683105 29465 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-24 00:51:22] CVMFS is ok
[2025-11-24 00:51:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 00:51:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 00:51:22] Further information can be found at the LHC@home message board.
[2025-11-24 00:51:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 00:51:22] Checking for apptainer binary...
[2025-11-24 00:51:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 00:51:22] Running /usr/bin/apptainer --version
[2025-11-24 00:51:22] apptainer version 1.3.2-1.el7
[2025-11-24 00:51:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 00:51:24] c-204-10.aglt2.org
[2025-11-24 00:51:24] apptainer works
[2025-11-24 00:51:24] Set ATHENA_PROC_NUMBER=8
[2025-11-24 00:51:24] Set ATHENA_CORE_NUMBER=8
[2025-11-24 00:51:24] Starting ATLAS job with PandaID=6895356983
[2025-11-24 00:51:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 13:53:06]  *** The last 200 lines of the pilot log: ***
[2025-11-24 13:53:06] 2025-11-24 18:52:10,090 | INFO     | monitor loop #3446: job 0:6895356983 is in state 'finished'
[2025-11-24 13:53:06] 2025-11-24 18:52:10,090 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 13:53:06] 2025-11-24 18:52:11,060 | INFO     | time since job start (46829s) is within the limit (172800.0s)
[2025-11-24 13:53:06] 2025-11-24 18:52:11,348 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-24 13:53:06] 2025-11-24 18:52:11,351 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1679.125
[2025-11-24 13:53:06] 2025-11-24 18:52:11,353 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895356983/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 13:53:06] 2025-11-24 18:52:11,354 | INFO     | extracted standard info from prmon json
[2025-11-24 13:53:06] 2025-11-24 18:52:11,354 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 13:53:06] 2025-11-24 18:52:11,354 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 13:53:06] 2025-11-24 18:52:11,369 | INFO     | fitting pss+swap vs Time
[2025-11-24 13:53:06] 2025-11-24 18:52:11,370 | INFO     | sum of square deviations: 139914400400.8971
[2025-11-24 13:53:06] 2025-11-24 18:52:11,382 | INFO     | sum of deviations: 972911027010.7211
[2025-11-24 13:53:06] 2025-11-24 18:52:11,382 | INFO     | mean x: 1763986898.5945241
[2025-11-24 13:53:06] 2025-11-24 18:52:11,382 | INFO     | mean y: 2878244.83833116
[2025-11-24 13:53:06] 2025-11-24 18:52:11,382 | INFO     | intersect: -12263209450.406878
[2025-11-24 13:53:06] 2025-11-24 18:52:11,383 | INFO     | chi2: 5.22209379451791
[2025-11-24 13:53:06] 2025-11-24 18:52:11,384 | INFO     | sum of square deviations: 137196060601.6182
[2025-11-24 13:53:06] 2025-11-24 18:52:11,396 | INFO     | sum of deviations: 1197626204344.2573
[2025-11-24 13:53:06] 2025-11-24 18:52:11,396 | INFO     | mean x: 1763986746.0984251
[2025-11-24 13:53:06] 2025-11-24 18:52:11,396 | INFO     | mean y: 2890843.7965879263
[2025-11-24 13:53:06] 2025-11-24 18:52:11,396 | INFO     | intersect: -15395486791.6799
[2025-11-24 13:53:06] 2025-11-24 18:52:11,397 | INFO     | chi2: 2.634547222001167
[2025-11-24 13:53:06] 2025-11-24 18:52:11,397 | INFO     | current chi2=2.634547222001167 (change=49.549982714464406 %)
[2025-11-24 13:53:06] 2025-11-24 18:52:11,398 | INFO     | sum of square deviations: 134513163327.31544
[2025-11-24 13:53:06] 2025-11-24 18:52:11,410 | INFO     | sum of deviations: 1236487730988.712
[2025-11-24 13:53:06] 2025-11-24 18:52:11,410 | INFO     | mean x: 1763986593.602378
[2025-11-24 13:53:06] 2025-11-24 18:52:11,410 | INFO     | mean y: 2893047.0488771466
[2025-11-24 13:53:06] 2025-11-24 18:52:11,410 | INFO     | intersect: -16212232124.830774
[2025-11-24 13:53:06] 2025-11-24 18:52:11,411 | INFO     | chi2: 2.4558608597259957
[2025-11-24 13:53:06] 2025-11-24 18:52:11,411 | INFO     | current chi2=2.4558608597259957 (change=6.782431561027163 %)
[2025-11-24 13:53:06] 2025-11-24 18:52:11,411 | INFO     | right removable region: 756
[2025-11-24 13:53:06] 2025-11-24 18:52:11,412 | INFO     | sum of square deviations: 137195828984.81374
[2025-11-24 13:53:06] 2025-11-24 18:52:11,424 | INFO     | sum of deviations: 763076841736.3258
[2025-11-24 13:53:06] 2025-11-24 18:52:11,424 | INFO     | mean x: 1763987051.097113
[2025-11-24 13:53:06] 2025-11-24 18:52:11,424 | INFO     | mean y: 2889995.7388451444
[2025-11-24 13:53:06] 2025-11-24 18:52:11,424 | INFO     | intersect: -9808324221.01373
[2025-11-24 13:53:06] 2025-11-24 18:52:11,425 | INFO     | chi2: 2.932825162968416
[2025-11-24 13:53:06] 2025-11-24 18:52:11,425 | INFO     | current chi2=2.932825162968416 (change=43.8381369931107 %)
[2025-11-24 13:53:06] 2025-11-24 18:52:11,426 | INFO     | sum of square deviations: 134512792936.11356
[2025-11-24 13:53:06] 2025-11-24 18:52:11,438 | INFO     | sum of deviations: 717588179955.3394
[2025-11-24 13:53:06] 2025-11-24 18:52:11,438 | INFO     | mean x: 1763987203.5970938
[2025-11-24 13:53:06] 2025-11-24 18:52:11,438 | INFO     | mean y: 2892580.0634081904
[2025-11-24 13:53:06] 2025-11-24 18:52:11,438 | INFO     | intersect: -9407486457.229668
[2025-11-24 13:53:06] 2025-11-24 18:52:11,439 | INFO     | chi2: 2.892038248130848
[2025-11-24 13:53:06] 2025-11-24 18:52:11,439 | INFO     | current chi2=2.892038248130848 (change=1.3907039312321574 %)
[2025-11-24 13:53:06] 2025-11-24 18:52:11,439 | INFO     | left removable region: 20
[2025-11-24 13:53:06] 2025-11-24 18:52:11,440 | INFO     | sum of square deviations: 123625989034.52039
[2025-11-24 13:53:06] 2025-11-24 18:52:11,451 | INFO     | sum of deviations: 925492623147.1399
[2025-11-24 13:53:06] 2025-11-24 18:52:11,451 | INFO     | mean x: 1763987173.107337
[2025-11-24 13:53:06] 2025-11-24 18:52:11,452 | INFO     | mean y: 2910769.7703804346
[2025-11-24 13:53:06] 2025-11-24 18:52:11,452 | INFO     | intersect: -13202703428.237406
[2025-11-24 13:53:06] 2025-11-24 18:52:11,452 | INFO     | chi2: 0.10025657409093583
[2025-11-24 13:53:06] 2025-11-24 18:52:11,453 | INFO     | current memory leak: 7.49 B/s (using 736 data points, chi2=0.10)
[2025-11-24 13:53:06] 2025-11-24 18:52:11,453 | INFO     | could have reported an average CPU frequency of 2173 MHz (29 samples)
[2025-11-24 13:53:06] 2025-11-24 18:52:11,453 | INFO     | ..............................
[2025-11-24 13:53:06] 2025-11-24 18:52:11,453 | INFO     | . Timing measurements:
[2025-11-24 13:53:06] 2025-11-24 18:52:11,454 | INFO     | . get job = 0 s
[2025-11-24 13:53:06] 2025-11-24 18:52:11,454 | INFO     | . initial setup = 2 s
[2025-11-24 13:53:06] 2025-11-24 18:52:11,454 | INFO     | . payload setup = 9 s
[2025-11-24 13:53:06] 2025-11-24 18:52:11,454 | INFO     | . stage-in = 0 s
[2025-11-24 13:53:06] 2025-11-24 18:52:11,454 | INFO     | . payload execution = 46787 s
[2025-11-24 13:53:06] 2025-11-24 18:52:11,454 | INFO     | . stage-out = 3 s
[2025-11-24 13:53:06] 2025-11-24 18:52:11,454 | INFO     | . log creation = 0 s
[2025-11-24 13:53:06] 2025-11-24 18:52:11,454 | INFO     | ..............................
[2025-11-24 13:53:06] 2025-11-24 18:52:11,748 | INFO     | 
[2025-11-24 13:53:06] 2025-11-24 18:52:11,749 | INFO     | job summary report
[2025-11-24 13:53:06] 2025-11-24 18:52:11,749 | INFO     | --------------------------------------------------
[2025-11-24 13:53:06] 2025-11-24 18:52:11,749 | INFO     | PanDA job id: 6895356983
[2025-11-24 13:53:06] 2025-11-24 18:52:11,749 | INFO     | task id: 47556137
[2025-11-24 13:53:06] 2025-11-24 18:52:11,749 | INFO     | errors: (none)
[2025-11-24 13:53:06] 2025-11-24 18:52:11,750 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 13:53:06] 2025-11-24 18:52:11,750 | INFO     | pilot state: finished 
[2025-11-24 13:53:06] 2025-11-24 18:52:11,750 | INFO     | transexitcode: 0
[2025-11-24 13:53:06] 2025-11-24 18:52:11,750 | INFO     | exeerrorcode: 0
[2025-11-24 13:53:06] 2025-11-24 18:52:11,750 | INFO     | exeerrordiag: 
[2025-11-24 13:53:06] 2025-11-24 18:52:11,750 | INFO     | exitcode: 0
[2025-11-24 13:53:06] 2025-11-24 18:52:11,751 | INFO     | exitmsg: OK
[2025-11-24 13:53:06] 2025-11-24 18:52:11,751 | INFO     | cpuconsumptiontime: 363108 s
[2025-11-24 13:53:06] 2025-11-24 18:52:11,751 | INFO     | nevents: 1000
[2025-11-24 13:53:06] 2025-11-24 18:52:11,751 | INFO     | neventsw: 0
[2025-11-24 13:53:06] 2025-11-24 18:52:11,751 | INFO     | pid: 4955
[2025-11-24 13:53:06] 2025-11-24 18:52:11,751 | INFO     | pgrp: 4955
[2025-11-24 13:53:06] 2025-11-24 18:52:11,752 | INFO     | corecount: 8
[2025-11-24 13:53:06] 2025-11-24 18:52:11,752 | INFO     | event service: False
[2025-11-24 13:53:06] 2025-11-24 18:52:11,752 | INFO     | sizes: {0: 2298636, 1: 2298835, 7: 2299097, 11: 2299125, 46800: 2345747, 46801: 2345746, 46805: 2355771, 46812: 2355961}
[2025-11-24 13:53:06] 2025-11-24 18:52:11,752 | INFO     | --------------------------------------------------
[2025-11-24 13:53:06] 2025-11-24 18:52:11,752 | INFO     | 
[2025-11-24 13:53:06] 2025-11-24 18:52:11,752 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-24 13:53:06] 2025-11-24 18:52:11,784 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 13:53:06] 2025-11-24 18:52:11,785 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 13:53:06] 2025-11-24 18:52:11,785 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 13:53:06] 2025-11-24 18:52:11,785 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 13:53:06] 2025-11-24 18:52:11,785 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 13:53:06] 2025-11-24 18:52:11,786 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 13:53:06] 2025-11-24 18:52:11,786 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 13:53:06] 2025-11-24 18:52:11,786 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 13:53:06] 2025-11-24 18:52:11,786 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 13:53:06] 2025-11-24 18:52:11,786 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 13:53:06] 2025-11-24 18:52:11,786 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 13:53:06] 2025-11-24 18:52:11,787 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 13:53:06] 2025-11-24 18:52:11,787 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 13:53:06] 2025-11-24 18:52:11,787 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 13:53:06] 2025-11-24 18:52:11,787 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 13:53:06] 2025-11-24 18:52:11,787 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 13:53:06] 2025-11-24 18:52:11,787 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 13:53:06] 2025-11-24 18:52:11,788 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 13:53:06] 2025-11-24 18:52:11,788 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 13:53:06] 2025-11-24 18:52:11,788 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 13:53:06] 2025-11-24 18:52:11,788 | INFO     | job 6895356983 has completed (purged errors)
[2025-11-24 13:53:06] 2025-11-24 18:52:11,788 | INFO     | overall cleanup function is called
[2025-11-24 13:53:06] 2025-11-24 18:52:12,176 | INFO     | PID=30888 has CPU usage=14.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-24 13:53:06] 2025-11-24 18:52:12,803 | INFO     | --- collectZombieJob: --- 10, [4955]
[2025-11-24 13:53:06] 2025-11-24 18:52:12,803 | INFO     | zombie collector waiting for pid 4955
[2025-11-24 13:53:06] 2025-11-24 18:52:12,803 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 13:53:06] 2025-11-24 18:52:12,803 | INFO     | collected zombie processes
[2025-11-24 13:53:06] 2025-11-24 18:52:12,803 | INFO     | will attempt to kill all subprocesses of pid=4955
[2025-11-24 13:53:06] 2025-11-24 18:52:12,892 | INFO     | process IDs to be killed: [4955] (in reverse order)
[2025-11-24 13:53:06] 2025-11-24 18:52:12,951 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 13:53:06] 2025-11-24 18:52:12,951 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 13:53:06] 2025-11-24 18:52:12,955 | INFO     | did not find any defunct processes belonging to 4955
[2025-11-24 13:53:06] 2025-11-24 18:52:12,959 | INFO     | did not find any defunct processes belonging to 4955
[2025-11-24 13:53:06] 2025-11-24 18:52:12,961 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 13:53:06] 2025-11-24 18:52:12,961 | INFO     | ready for new job
[2025-11-24 13:53:06] 2025-11-24 18:52:12,962 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 13:53:06] 2025-11-24 18:52:12,965 | INFO     | ***************************************
[2025-11-24 13:53:06] 2025-11-24 18:52:12,965 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 13:53:06] 2025-11-24 18:52:12,965 | INFO     | ***************************************
[2025-11-24 13:53:06] 2025-11-24 18:52:12,965 | INFO     | 
[2025-11-24 13:53:06] 2025-11-24 18:52:12,966 | INFO     | architecture information:
[2025-11-24 13:53:06] 2025-11-24 18:52:12,967 | INFO     | executing command: cat /etc/os-release
[2025-11-24 13:53:06] 2025-11-24 18:52:12,985 | INFO     | cat /etc/os-release:
[2025-11-24 13:53:06] NAME="CentOS Linux"
[2025-11-24 13:53:06] VERSION="7 (Core)"
[2025-11-24 13:53:06] ID="centos"
[2025-11-24 13:53:06] ID_LIKE="rhel fedora"
[2025-11-24 13:53:06] VERSION_ID="7"
[2025-11-24 13:53:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 13:53:06] ANSI_COLOR="0;31"
[2025-11-24 13:53:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 13:53:06] HOME_URL="https://www.centos.org/"
[2025-11-24 13:53:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 13:53:06] 
[2025-11-24 13:53:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 13:53:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 13:53:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 13:53:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 13:53:06] 
[2025-11-24 13:53:06] 2025-11-24 18:52:12,986 | INFO     | ***************************************
[2025-11-24 13:53:06] 2025-11-24 18:52:13,489 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-24 13:53:06] 2025-11-24 18:52:13,509 | INFO     | sufficient remaining disk space (17437818880 B)
[2025-11-24 13:53:06] 2025-11-24 18:52:13,510 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 13:53:06] 2025-11-24 18:52:13,510 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 13:53:06] 2025-11-24 18:52:13,510 | INFO     | update_server=False
[2025-11-24 13:53:06] 2025-11-24 18:52:13,511 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 13:53:06] 2025-11-24 18:52:13,511 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 13:53:06] 2025-11-24 18:52:13,511 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 13:53:06] 2025-11-24 18:52:13,599 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 13:53:06] 2025-11-24 18:52:13,599 | INFO     | aborting loop
[2025-11-24 13:53:06] 2025-11-24 18:52:13,706 | INFO     | all job control threads have been joined
[2025-11-24 13:53:06] 2025-11-24 18:52:13,854 | INFO     | all data control threads have been joined
[2025-11-24 13:53:06] 2025-11-24 18:52:14,516 | INFO     | [job] retrieve thread has finished
[2025-11-24 13:53:06] 2025-11-24 18:52:14,517 | INFO     | [job] queue monitor thread has finished
[2025-11-24 13:53:06] 2025-11-24 18:52:14,605 | INFO     | [job] job monitor thread has finished
[2025-11-24 13:53:06] 2025-11-24 18:52:14,650 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 13:53:06] 2025-11-24 18:52:14,712 | INFO     | [job] control thread has finished
[2025-11-24 13:53:06] 2025-11-24 18:52:14,799 | INFO     | all payload control threads have been joined
[2025-11-24 13:53:06] 2025-11-24 18:52:14,857 | INFO     | [data] control thread has finished
[2025-11-24 13:53:06] 2025-11-24 18:52:15,088 | INFO     | [data] copytool_in thread has finished
[2025-11-24 13:53:06] 2025-11-24 18:52:15,107 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 13:53:06] 2025-11-24 18:52:15,151 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 13:53:06] 2025-11-24 18:52:15,234 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 13:53:06] 2025-11-24 18:52:15,291 | INFO     | [payload] failed_post thread has finished
[2025-11-24 13:53:06] 2025-11-24 18:52:15,362 | INFO     | [job] validate thread has finished
[2025-11-24 13:53:06] 2025-11-24 18:52:15,386 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 13:53:06] 2025-11-24 18:52:15,514 | INFO     | [data] copytool_out thread has finished
[2025-11-24 13:53:06] 2025-11-24 18:52:15,804 | INFO     | [payload] control thread has finished
[2025-11-24 13:53:06] 2025-11-24 18:52:16,013 | INFO     | [payload] validate_post thread has finished
[2025-11-24 13:53:06] 2025-11-24 18:52:19,158 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 13:53:06] 2025-11-24 18:52:44,399 | INFO     | PID=30888 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-24 13:53:06] 2025-11-24 18:52:44,400 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 13:53:06] 2025-11-24 18:52:44,400 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 13:53:06] 2025-11-24 18:52:44,400 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 13:53:06] 2025-11-24 18:53:00,118 | INFO     | [monitor] cgroup control has ended
[2025-11-24 13:53:06] 2025-11-24 18:53:01,075 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140483724298048)>', '<ExcThread(monitor, started 140482969577216)>']
[2025-11-24 13:53:06] 2025-11-24 18:53:01,479 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 13:53:06] 2025-11-24 18:53:01,479 | INFO     | [monitor] control thread has ended
[2025-11-24 13:53:06] 2025-11-24 18:53:06,100 | INFO     | all workflow threads have been joined
[2025-11-24 13:53:06] 2025-11-24 18:53:06,101 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 13:53:06] 2025-11-24 18:53:06,101 | INFO     | traces error code: 0
[2025-11-24 13:53:06] 2025-11-24 18:53:06,101 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 13:53:06] 2025-11-24 18:53:06,211 [wrapper] ==== pilot stdout END ====
[2025-11-24 13:53:06] 2025-11-24 18:53:06,216 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 13:53:06] 2025-11-24 18:53:06,221 [wrapper] pilotpid: 30888
[2025-11-24 13:53:06] 2025-11-24 18:53:06,226 [wrapper] Pilot exit status: 0
[2025-11-24 13:53:06] 2025-11-24 18:53:06,244 [wrapper] pandaids: 6895356983
[2025-11-24 13:53:06] 2025-11-24 18:53:06,296 [wrapper] cleanup supervisor_pilot 25236 30889
[2025-11-24 13:53:06] 2025-11-24 18:53:06,301 [wrapper] Test setup, not cleaning
[2025-11-24 13:53:06] 2025-11-24 18:53:06,307 [wrapper] apfmon messages muted
[2025-11-24 13:53:06] 2025-11-24 18:53:06,312 [wrapper] ==== wrapper stdout END ====
[2025-11-24 13:53:06] 2025-11-24 18:53:06,316 [wrapper] ==== wrapper stderr END ====
[2025-11-24 13:53:06]  *** Error codes and diagnostics ***
[2025-11-24 13:53:06]     "exeErrorCode": 0,
[2025-11-24 13:53:06]     "exeErrorDiag": "",
[2025-11-24 13:53:06]     "pilotErrorCode": 0,
[2025-11-24 13:53:06]     "pilotErrorDiag": "",
[2025-11-24 13:53:06]  *** Listing of results directory ***
[2025-11-24 13:53:06] total 1344824
[2025-11-24 13:53:06] -rw-r--r-- 1 boincer umatlas    576529 Nov 23 06:44 pilot3.tar.gz
[2025-11-24 13:53:06] -rwx------ 1 boincer umatlas     36292 Nov 23 06:47 runpilot2-wrapper.sh
[2025-11-24 13:53:06] -rw-r--r-- 1 boincer umatlas      5112 Nov 23 06:47 queuedata.json
[2025-11-24 13:53:06] -rw-r--r-- 1 boincer umatlas       100 Nov 24 00:51 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 13:53:06] -rwxr-xr-x 1 boincer umatlas      7986 Nov 24 00:51 run_atlas
[2025-11-24 13:53:06] -rw-r--r-- 1 boincer umatlas       105 Nov 24 00:51 job.xml
[2025-11-24 13:53:06] -rw-r--r-- 2 boincer umatlas 413414833 Nov 24 00:51 EVNT.47483658._000713.pool.root.1
[2025-11-24 13:53:06] -rw-r--r-- 2 boincer umatlas     15847 Nov 24 00:51 start_atlas.sh
[2025-11-24 13:53:06] drwxrwx--x 2 boincer umatlas      4096 Nov 24 00:51 shared
[2025-11-24 13:53:06] -rw-r--r-- 2 boincer umatlas    590100 Nov 24 00:51 input.tar.gz
[2025-11-24 13:53:06] -rw-r--r-- 1 boincer umatlas         0 Nov 24 00:51 boinc_lockfile
[2025-11-24 13:53:06] -rw-r--r-- 1 boincer umatlas      2786 Nov 24 00:51 pandaJob.out
[2025-11-24 13:53:06] -rw------- 1 boincer umatlas        57 Nov 24 00:51 setup.sh.local
[2025-11-24 13:53:06] -rw------- 1 boincer umatlas    989786 Nov 24 00:51 agis_schedconf.cvmfs.json
[2025-11-24 13:53:06] drwx------ 5 boincer umatlas      4096 Nov 24 00:51 pilot3
[2025-11-24 13:53:06] -rw-r--r-- 1 boincer umatlas       533 Nov 24 13:41 boinc_task_state.xml
[2025-11-24 13:53:06] -rw-r--r-- 1 boincer umatlas      5912 Nov 24 13:47 init_data.xml
[2025-11-24 13:53:06] -rw------- 1 boincer umatlas 942883172 Nov 24 13:51 HITS.47556137._007088.pool.root.1
[2025-11-24 13:53:06] -rw------- 1 boincer umatlas      1064 Nov 24 13:51 memory_monitor_summary.json
[2025-11-24 13:53:06] -rw------- 1 boincer umatlas   1516227 Nov 24 13:52 agis_ddmendpoints.agis.ALL.json
[2025-11-24 13:53:06] -rw------- 1 boincer umatlas   2000545 Nov 24 13:52 log.47556137._007088.job.log.tgz.1
[2025-11-24 13:53:06] -rw------- 1 boincer umatlas      8659 Nov 24 13:52 heartbeat.json
[2025-11-24 13:53:06] -rw------- 1 boincer umatlas        95 Nov 24 13:52 pilot_heartbeat.json
[2025-11-24 13:53:06] -rw-r--r-- 1 boincer umatlas      8192 Nov 24 13:53 boinc_mmap_file
[2025-11-24 13:53:06] -rw-r--r-- 1 boincer umatlas        29 Nov 24 13:53 wrapper_checkpoint.txt
[2025-11-24 13:53:06] -rw------- 1 boincer umatlas      4746 Nov 24 13:53 pilotlog.txt
[2025-11-24 13:53:06] -rw------- 1 boincer umatlas   6440573 Nov 24 13:53 log.47556137._007088.job.log.1
[2025-11-24 13:53:06] -rw------- 1 boincer umatlas       353 Nov 24 13:53 output.list
[2025-11-24 13:53:06] -rw-r--r-- 1 boincer umatlas       620 Nov 24 13:53 runtime_log
[2025-11-24 13:53:06] -rw------- 1 boincer umatlas   8458240 Nov 24 13:53 result.tar.gz
[2025-11-24 13:53:06] -rw-r--r-- 1 boincer umatlas      9343 Nov 24 13:53 runtime_log.err
[2025-11-24 13:53:06] -rw------- 1 boincer umatlas       668 Nov 24 13:53 4DwKDmwjNh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmarKKDmy3fyHn.diag
[2025-11-24 13:53:06] -rw-r--r-- 1 boincer umatlas     21403 Nov 24 13:53 stderr.txt
[2025-11-24 13:53:06] HITS file was successfully produced:
[2025-11-24 13:53:06] -rw------- 1 boincer umatlas 942883172 Nov 24 13:51 shared/HITS.pool.root.1
[2025-11-24 13:53:06]  *** Contents of shared directory: ***
[2025-11-24 13:53:06] total 1333380
[2025-11-24 13:53:06] -rw-r--r-- 2 boincer umatlas 413414833 Nov 24 00:51 ATLAS.root_0
[2025-11-24 13:53:06] -rw-r--r-- 2 boincer umatlas     15847 Nov 24 00:51 start_atlas.sh
[2025-11-24 13:53:06] -rw-r--r-- 2 boincer umatlas    590100 Nov 24 00:51 input.tar.gz
[2025-11-24 13:53:06] -rw------- 1 boincer umatlas 942883172 Nov 24 13:51 HITS.pool.root.1
[2025-11-24 13:53:06] -rw------- 1 boincer umatlas   8458240 Nov 24 13:53 result.tar.gz
13:53:08 (27136): run_atlas exited; CPU time 358848.791130
13:53:08 (27136): called boinc_finish(0)

</stderr_txt>
]]>

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