Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:21:39 (4129941): wrapper (7.7.26015): starting
06:21:39 (4129941): wrapper: running run_atlas (--nthreads 8)
[2025-11-24 06:21:39] Arguments: --nthreads 8
[2025-11-24 06:21:39] Threads: 8
[2025-11-24 06:21:39] Checking for CVMFS
[2025-11-24 06:21:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 06:21:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 06:21:40] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 06:21:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 06:21:40] 2.13.3.0 9428 25408 322664 153244 3 88 16744810 18491393 27667 16776704 0 126840256 99.321 207567606 33499 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-24 06:21:40] CVMFS is ok
[2025-11-24 06:21:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 06:21:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 06:21:40] Further information can be found at the LHC@home message board.
[2025-11-24 06:21:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 06:21:40] Checking for apptainer binary...
[2025-11-24 06:21:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 06:21:40] Running /usr/bin/apptainer --version
[2025-11-24 06:21:40] apptainer version 1.4.4-1.el9
[2025-11-24 06:21:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 06:21:41] c-8-38.aglt2.org
[2025-11-24 06:21:41] apptainer works
[2025-11-24 06:21:41] Set ATHENA_PROC_NUMBER=8
[2025-11-24 06:21:41] Set ATHENA_CORE_NUMBER=8
[2025-11-24 06:21:41] Starting ATLAS job with PandaID=6895351468
[2025-11-24 06:21:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 02:41:35]  *** The last 200 lines of the pilot log: ***
[2025-11-25 02:41:35] 2025-11-25 07:40:33,377 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 02:41:35] 2025-11-25 07:40:33,377 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 02:41:35] 2025-11-25 07:40:33,420 | INFO     | fitting pss+swap vs Time
[2025-11-25 02:41:35] 2025-11-25 07:40:33,438 | INFO     | sum of square deviations: 531815798860.47815
[2025-11-25 02:41:35] 2025-11-25 07:40:33,485 | INFO     | sum of deviations: 2768089121272.6885
[2025-11-25 02:41:35] 2025-11-25 07:40:33,486 | INFO     | mean x: 1764019882.2013366
[2025-11-25 02:41:35] 2025-11-25 07:40:33,486 | INFO     | mean y: 2961067.320802005
[2025-11-25 02:41:35] 2025-11-25 07:40:33,486 | INFO     | intersect: -9178722245.00835
[2025-11-25 02:41:35] 2025-11-25 07:40:33,488 | INFO     | chi2: 10.787072061753511
[2025-11-25 02:41:35] 2025-11-25 07:40:33,489 | INFO     | sum of square deviations: 525179685103.23175
[2025-11-25 02:41:35] 2025-11-25 07:40:33,525 | INFO     | sum of deviations: 3190335581676.1606
[2025-11-25 02:41:35] 2025-11-25 07:40:33,525 | INFO     | mean x: 1764019729.7063758
[2025-11-25 02:41:35] 2025-11-25 07:40:33,525 | INFO     | mean y: 2970770.2290268457
[2025-11-25 02:41:35] 2025-11-25 07:40:33,526 | INFO     | intersect: -10713009055.522963
[2025-11-25 02:41:35] 2025-11-25 07:40:33,527 | INFO     | chi2: 7.459352518713207
[2025-11-25 02:41:35] 2025-11-25 07:40:33,527 | INFO     | current chi2=7.459352518713207 (change=30.849145384307008 %)
[2025-11-25 02:41:35] 2025-11-25 07:40:33,528 | INFO     | sum of square deviations: 518599014245.9241
[2025-11-25 02:41:35] 2025-11-25 07:40:33,563 | INFO     | sum of deviations: 3578981625637.998
[2025-11-25 02:41:35] 2025-11-25 07:40:33,563 | INFO     | mean x: 1764019577.2114575
[2025-11-25 02:41:35] 2025-11-25 07:40:33,563 | INFO     | mean y: 2979772.5299073295
[2025-11-25 02:41:35] 2025-11-25 07:40:33,563 | INFO     | intersect: -12170960942.119526
[2025-11-25 02:41:35] 2025-11-25 07:40:33,565 | INFO     | chi2: 4.445240840138473
[2025-11-25 02:41:35] 2025-11-25 07:40:33,565 | INFO     | current chi2=4.445240840138473 (change=40.40714889145218 %)
[2025-11-25 02:41:35] 2025-11-25 07:40:33,566 | INFO     | sum of square deviations: 512073119534.6193
[2025-11-25 02:41:35] 2025-11-25 07:40:33,600 | INFO     | sum of deviations: 3682606322411.981
[2025-11-25 02:41:35] 2025-11-25 07:40:33,601 | INFO     | mean x: 1764019424.711506
[2025-11-25 02:41:35] 2025-11-25 07:40:33,601 | INFO     | mean y: 2982191.560067682
[2025-11-25 02:41:35] 2025-11-25 07:40:33,601 | INFO     | intersect: -12683075401.55082
[2025-11-25 02:41:35] 2025-11-25 07:40:33,602 | INFO     | chi2: 4.082090369455258
[2025-11-25 02:41:35] 2025-11-25 07:40:33,603 | INFO     | current chi2=4.082090369455258 (change=8.169421719609277 %)
[2025-11-25 02:41:35] 2025-11-25 07:40:33,603 | INFO     | right removable region: 1181
[2025-11-25 02:41:35] 2025-11-25 07:40:33,604 | INFO     | sum of square deviations: 525178807923.232
[2025-11-25 02:41:35] 2025-11-25 07:40:33,638 | INFO     | sum of deviations: 2328962999518.638
[2025-11-25 02:41:35] 2025-11-25 07:40:33,639 | INFO     | mean x: 1764020034.7063758
[2025-11-25 02:41:35] 2025-11-25 07:40:33,639 | INFO     | mean y: 2971154.3246644298
[2025-11-25 02:41:35] 2025-11-25 07:40:33,639 | INFO     | intersect: -7819769080.542675
[2025-11-25 02:41:35] 2025-11-25 07:40:33,641 | INFO     | chi2: 7.534675694029023
[2025-11-25 02:41:35] 2025-11-25 07:40:33,641 | INFO     | current chi2=7.534675694029023 (change=30.15087272158066 %)
[2025-11-25 02:41:35] 2025-11-25 07:40:33,642 | INFO     | sum of square deviations: 518597550495.6019
[2025-11-25 02:41:35] 2025-11-25 07:40:33,690 | INFO     | sum of deviations: 2194354543276.9495
[2025-11-25 02:41:35] 2025-11-25 07:40:33,691 | INFO     | mean x: 1764020187.2080877
[2025-11-25 02:41:35] 2025-11-25 07:40:33,691 | INFO     | mean y: 2974270.2552653747
[2025-11-25 02:41:35] 2025-11-25 07:40:33,691 | INFO     | intersect: -7461167641.971429
[2025-11-25 02:41:35] 2025-11-25 07:40:33,697 | INFO     | chi2: 7.233409053330571
[2025-11-25 02:41:35] 2025-11-25 07:40:33,697 | INFO     | current chi2=7.233409053330571 (change=3.9984022263518963 %)
[2025-11-25 02:41:35] 2025-11-25 07:40:33,697 | INFO     | left removable region: 20
[2025-11-25 02:41:35] 2025-11-25 07:40:33,699 | INFO     | sum of square deviations: 485261620576.7354
[2025-11-25 02:41:35] 2025-11-25 07:40:33,754 | INFO     | sum of deviations: 2978537391851.492
[2025-11-25 02:41:35] 2025-11-25 07:40:33,754 | INFO     | mean x: 1764020004.216193
[2025-11-25 02:41:35] 2025-11-25 07:40:33,754 | INFO     | mean y: 2998628.069767442
[2025-11-25 02:41:35] 2025-11-25 07:40:33,755 | INFO     | intersect: -10824561845.984043
[2025-11-25 02:41:35] 2025-11-25 07:40:33,756 | INFO     | chi2: 0.4515634494061083
[2025-11-25 02:41:35] 2025-11-25 07:40:33,756 | INFO     | current memory leak: 6.14 B/s (using 1161 data points, chi2=0.45)
[2025-11-25 02:41:35] 2025-11-25 07:40:33,758 | INFO     | could have reported an average CPU frequency of 2600 MHz (43 samples)
[2025-11-25 02:41:35] 2025-11-25 07:40:33,758 | INFO     | ..............................
[2025-11-25 02:41:35] 2025-11-25 07:40:33,758 | INFO     | . Timing measurements:
[2025-11-25 02:41:35] 2025-11-25 07:40:33,758 | INFO     | . get job = 0 s
[2025-11-25 02:41:35] 2025-11-25 07:40:33,758 | INFO     | . initial setup = 5 s
[2025-11-25 02:41:35] 2025-11-25 07:40:33,758 | INFO     | . payload setup = 14 s
[2025-11-25 02:41:35] 2025-11-25 07:40:33,758 | INFO     | . stage-in = 0 s
[2025-11-25 02:41:35] 2025-11-25 07:40:33,759 | INFO     | . payload execution = 73003 s
[2025-11-25 02:41:35] 2025-11-25 07:40:33,759 | INFO     | . stage-out = 9 s
[2025-11-25 02:41:35] 2025-11-25 07:40:33,759 | INFO     | . log creation = 2 s
[2025-11-25 02:41:35] 2025-11-25 07:40:33,759 | INFO     | ..............................
[2025-11-25 02:41:35] 2025-11-25 07:40:34,023 | INFO     | 
[2025-11-25 02:41:35] 2025-11-25 07:40:34,023 | INFO     | job summary report
[2025-11-25 02:41:35] 2025-11-25 07:40:34,023 | INFO     | --------------------------------------------------
[2025-11-25 02:41:35] 2025-11-25 07:40:34,023 | INFO     | PanDA job id: 6895351468
[2025-11-25 02:41:35] 2025-11-25 07:40:34,023 | INFO     | task id: 47556149
[2025-11-25 02:41:35] 2025-11-25 07:40:34,023 | INFO     | errors: (none)
[2025-11-25 02:41:35] 2025-11-25 07:40:34,023 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 02:41:35] 2025-11-25 07:40:34,024 | INFO     | pilot state: finished 
[2025-11-25 02:41:35] 2025-11-25 07:40:34,024 | INFO     | transexitcode: 0
[2025-11-25 02:41:35] 2025-11-25 07:40:34,024 | INFO     | exeerrorcode: 0
[2025-11-25 02:41:35] 2025-11-25 07:40:34,024 | INFO     | exeerrordiag: 
[2025-11-25 02:41:35] 2025-11-25 07:40:34,024 | INFO     | exitcode: 0
[2025-11-25 02:41:35] 2025-11-25 07:40:34,024 | INFO     | exitmsg: OK
[2025-11-25 02:41:35] 2025-11-25 07:40:34,024 | INFO     | cpuconsumptiontime: 299590 s
[2025-11-25 02:41:35] 2025-11-25 07:40:34,024 | INFO     | nevents: 1000
[2025-11-25 02:41:35] 2025-11-25 07:40:34,024 | INFO     | neventsw: 0
[2025-11-25 02:41:35] 2025-11-25 07:40:34,025 | INFO     | pid: 4140316
[2025-11-25 02:41:35] 2025-11-25 07:40:34,025 | INFO     | pgrp: 4140316
[2025-11-25 02:41:35] 2025-11-25 07:40:34,025 | INFO     | corecount: 8
[2025-11-25 02:41:35] 2025-11-25 07:40:34,025 | INFO     | event service: False
[2025-11-25 02:41:35] 2025-11-25 07:40:34,025 | INFO     | sizes: {0: 2298528, 1: 2298783, 2: 2298783, 12: 2298811, 16: 2299101, 23: 2299129, 73022: 2359542, 73023: 2359541, 73033: 2369410, 73037: 2369466, 73060: 2369712}
[2025-11-25 02:41:35] 2025-11-25 07:40:34,025 | INFO     | --------------------------------------------------
[2025-11-25 02:41:35] 2025-11-25 07:40:34,025 | INFO     | 
[2025-11-25 02:41:35] 2025-11-25 07:40:34,025 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-25 02:41:35] 2025-11-25 07:40:34,076 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 02:41:35] 2025-11-25 07:40:34,076 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 02:41:35] 2025-11-25 07:40:34,076 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 02:41:35] 2025-11-25 07:40:34,076 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 02:41:35] 2025-11-25 07:40:34,076 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 02:41:35] 2025-11-25 07:40:34,077 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 02:41:35] 2025-11-25 07:40:34,077 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 02:41:35] 2025-11-25 07:40:34,077 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 02:41:35] 2025-11-25 07:40:34,077 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 02:41:35] 2025-11-25 07:40:34,077 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 02:41:35] 2025-11-25 07:40:34,077 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 02:41:35] 2025-11-25 07:40:34,077 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 02:41:35] 2025-11-25 07:40:34,077 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 02:41:35] 2025-11-25 07:40:34,077 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 02:41:35] 2025-11-25 07:40:34,077 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 02:41:35] 2025-11-25 07:40:34,078 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 02:41:35] 2025-11-25 07:40:34,078 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 02:41:35] 2025-11-25 07:40:34,078 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 02:41:35] 2025-11-25 07:40:34,078 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 02:41:35] 2025-11-25 07:40:34,078 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 02:41:35] 2025-11-25 07:40:34,078 | INFO     | job 6895351468 has completed (purged errors)
[2025-11-25 02:41:35] 2025-11-25 07:40:34,078 | INFO     | overall cleanup function is called
[2025-11-25 02:41:35] 2025-11-25 07:40:35,097 | INFO     | --- collectZombieJob: --- 10, [4140316]
[2025-11-25 02:41:35] 2025-11-25 07:40:35,097 | INFO     | zombie collector waiting for pid 4140316
[2025-11-25 02:41:35] 2025-11-25 07:40:35,097 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 02:41:35] 2025-11-25 07:40:35,097 | INFO     | collected zombie processes
[2025-11-25 02:41:35] 2025-11-25 07:40:35,098 | INFO     | will attempt to kill all subprocesses of pid=4140316
[2025-11-25 02:41:35] 2025-11-25 07:40:36,026 | INFO     | process IDs to be killed: [4140316] (in reverse order)
[2025-11-25 02:41:35] 2025-11-25 07:40:36,890 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 02:41:35] 2025-11-25 07:40:36,891 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 02:41:35] 2025-11-25 07:40:36,926 | INFO     | did not find any defunct processes belonging to 4140316
[2025-11-25 02:41:35] 2025-11-25 07:40:36,943 | INFO     | did not find any defunct processes belonging to 4140316
[2025-11-25 02:41:35] 2025-11-25 07:40:36,945 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 02:41:35] 2025-11-25 07:40:36,945 | INFO     | ready for new job
[2025-11-25 02:41:35] 2025-11-25 07:40:36,946 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 02:41:35] 2025-11-25 07:40:36,966 | INFO     | ***************************************
[2025-11-25 02:41:35] 2025-11-25 07:40:36,967 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 02:41:35] 2025-11-25 07:40:36,967 | INFO     | ***************************************
[2025-11-25 02:41:35] 2025-11-25 07:40:36,967 | INFO     | 
[2025-11-25 02:41:35] 2025-11-25 07:40:36,969 | INFO     | architecture information:
[2025-11-25 02:41:35] 2025-11-25 07:40:36,981 | INFO     | executing command: cat /etc/os-release
[2025-11-25 02:41:35] 2025-11-25 07:40:37,085 | INFO     | cat /etc/os-release:
[2025-11-25 02:41:35] NAME="CentOS Linux"
[2025-11-25 02:41:35] VERSION="7 (Core)"
[2025-11-25 02:41:35] ID="centos"
[2025-11-25 02:41:35] ID_LIKE="rhel fedora"
[2025-11-25 02:41:35] VERSION_ID="7"
[2025-11-25 02:41:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 02:41:35] ANSI_COLOR="0;31"
[2025-11-25 02:41:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 02:41:35] HOME_URL="https://www.centos.org/"
[2025-11-25 02:41:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 02:41:35] 
[2025-11-25 02:41:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 02:41:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 02:41:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 02:41:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 02:41:35] 
[2025-11-25 02:41:35] 2025-11-25 07:40:37,085 | INFO     | ***************************************
[2025-11-25 02:41:35] 2025-11-25 07:40:37,589 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-25 02:41:35] 2025-11-25 07:40:37,675 | INFO     | sufficient remaining disk space (91238694912 B)
[2025-11-25 02:41:35] 2025-11-25 07:40:37,675 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 02:41:35] 2025-11-25 07:40:37,676 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 02:41:35] 2025-11-25 07:40:37,676 | INFO     | update_server=False
[2025-11-25 02:41:35] 2025-11-25 07:40:37,676 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 02:41:35] 2025-11-25 07:40:37,937 | INFO     | all data control threads have been joined
[2025-11-25 02:41:35] 2025-11-25 07:40:38,011 | INFO     | all payload control threads have been joined
[2025-11-25 02:41:35] 2025-11-25 07:40:38,411 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 02:41:35] 2025-11-25 07:40:38,411 | INFO     | aborting loop
[2025-11-25 02:41:35] 2025-11-25 07:40:38,500 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 02:41:35] 2025-11-25 07:40:38,637 | INFO     | all job control threads have been joined
[2025-11-25 02:41:35] 2025-11-25 07:40:38,682 | INFO     | [job] retrieve thread has finished
[2025-11-25 02:41:35] 2025-11-25 07:40:38,962 | INFO     | [data] control thread has finished
[2025-11-25 02:41:35] 2025-11-25 07:40:39,028 | INFO     | [payload] control thread has finished
[2025-11-25 02:41:35] 2025-11-25 07:40:39,042 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 02:41:35] 2025-11-25 07:40:39,100 | INFO     | [payload] validate_post thread has finished
[2025-11-25 02:41:35] 2025-11-25 07:40:39,295 | INFO     | [payload] failed_post thread has finished
[2025-11-25 02:41:35] 2025-11-25 07:40:39,343 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 02:41:35] 2025-11-25 07:40:39,416 | INFO     | [job] job monitor thread has finished
[2025-11-25 02:41:35] 2025-11-25 07:40:39,581 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 02:41:35] 2025-11-25 07:40:39,643 | INFO     | [job] control thread has finished
[2025-11-25 02:41:35] 2025-11-25 07:40:39,782 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 02:41:35] 2025-11-25 07:40:40,038 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 02:41:35] 2025-11-25 07:40:40,075 | INFO     | [job] queue monitor thread has finished
[2025-11-25 02:41:35] 2025-11-25 07:40:40,073 | INFO     | [job] validate thread has finished
[2025-11-25 02:41:35] 2025-11-25 07:40:40,145 | INFO     | [data] copytool_in thread has finished
[2025-11-25 02:41:35] 2025-11-25 07:40:40,212 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 02:41:35] 2025-11-25 07:40:40,508 | INFO     | [data] copytool_out thread has finished
[2025-11-25 02:41:35] 2025-11-25 07:40:44,224 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 02:41:35] 2025-11-25 07:41:06,783 | INFO     | PID=4133708 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-25 02:41:35] 2025-11-25 07:41:06,784 | INFO     | .. there are 43 such processes running
[2025-11-25 02:41:35] 2025-11-25 07:41:06,785 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 02:41:35] 2025-11-25 07:41:06,785 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 02:41:35] 2025-11-25 07:41:06,785 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 02:41:35] 2025-11-25 07:41:27,919 | INFO     | [monitor] cgroup control has ended
[2025-11-25 02:41:35] 2025-11-25 07:41:29,759 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139673709967168)>', '<ExcThread(monitor, started 139672990766848)>']
[2025-11-25 02:41:35] 2025-11-25 07:41:30,035 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 02:41:35] 2025-11-25 07:41:30,035 | INFO     | [monitor] control thread has ended
[2025-11-25 02:41:35] 2025-11-25 07:41:34,788 | INFO     | all workflow threads have been joined
[2025-11-25 02:41:35] 2025-11-25 07:41:34,788 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 02:41:35] 2025-11-25 07:41:34,788 | INFO     | traces error code: 0
[2025-11-25 02:41:35] 2025-11-25 07:41:34,789 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 02:41:35] 2025-11-25 07:41:35,255 [wrapper] ==== pilot stdout END ====
[2025-11-25 02:41:35] 2025-11-25 07:41:35,258 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 02:41:35] 2025-11-25 07:41:35,260 [wrapper] pilotpid: 4133708
[2025-11-25 02:41:35] 2025-11-25 07:41:35,263 [wrapper] Pilot exit status: 0
[2025-11-25 02:41:35] 2025-11-25 07:41:35,277 [wrapper] pandaids: 6895351468
[2025-11-25 02:41:35] 2025-11-25 07:41:35,364 [wrapper] cleanup supervisor_pilot 3126132 4133709
[2025-11-25 02:41:35] 2025-11-25 07:41:35,367 [wrapper] Test setup, not cleaning
[2025-11-25 02:41:35] 2025-11-25 07:41:35,371 [wrapper] apfmon messages muted
[2025-11-25 02:41:35] 2025-11-25 07:41:35,374 [wrapper] ==== wrapper stdout END ====
[2025-11-25 02:41:35] 2025-11-25 07:41:35,376 [wrapper] ==== wrapper stderr END ====
[2025-11-25 02:41:35]  *** Error codes and diagnostics ***
[2025-11-25 02:41:35]     "exeErrorCode": 0,
[2025-11-25 02:41:35]     "exeErrorDiag": "",
[2025-11-25 02:41:35]     "pilotErrorCode": 0,
[2025-11-25 02:41:35]     "pilotErrorDiag": "",
[2025-11-25 02:41:35]  *** Listing of results directory ***
[2025-11-25 02:41:35] total 1330880
[2025-11-25 02:41:35] -rw-r--r--. 1 boincer umatlas    576529 Nov 22 19:28 pilot3.tar.gz
[2025-11-25 02:41:35] -rw-r--r--. 1 boincer umatlas      5112 Nov 22 19:37 queuedata.json
[2025-11-25 02:41:35] -rwx------. 1 boincer umatlas     36292 Nov 22 19:38 runpilot2-wrapper.sh
[2025-11-25 02:41:35] -rw-r--r--. 1 boincer umatlas       100 Nov 24 06:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 02:41:35] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 24 06:21 run_atlas
[2025-11-25 02:41:35] -rw-r--r--. 1 boincer umatlas       105 Nov 24 06:21 job.xml
[2025-11-25 02:41:35] -rw-r--r--. 2 boincer umatlas 411951066 Nov 24 06:21 EVNT.47483658._001125.pool.root.1
[2025-11-25 02:41:35] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 06:21 start_atlas.sh
[2025-11-25 02:41:35] drwxrwx--x. 2 boincer umatlas      4096 Nov 24 06:21 shared
[2025-11-25 02:41:35] -rw-r--r--. 2 boincer umatlas    590102 Nov 24 06:21 input.tar.gz
[2025-11-25 02:41:35] -rw-r--r--. 1 boincer umatlas         0 Nov 24 06:21 boinc_lockfile
[2025-11-25 02:41:35] -rw-r--r--. 1 boincer umatlas      2784 Nov 24 06:21 pandaJob.out
[2025-11-25 02:41:35] -rw-------. 1 boincer umatlas        57 Nov 24 06:21 setup.sh.local
[2025-11-25 02:41:35] -rw-------. 1 boincer umatlas    989803 Nov 24 06:22 agis_schedconf.cvmfs.json
[2025-11-25 02:41:35] drwx------. 5 boincer umatlas      4096 Nov 24 06:22 pilot3
[2025-11-25 02:41:35] -rw-r--r--. 1 boincer umatlas       533 Nov 25 02:24 boinc_task_state.xml
[2025-11-25 02:41:35] -rw-------. 1 boincer umatlas 922975060 Nov 25 02:39 HITS.47556149._001120.pool.root.1
[2025-11-25 02:41:35] -rw-------. 1 boincer umatlas      1064 Nov 25 02:39 memory_monitor_summary.json
[2025-11-25 02:41:35] -rw-r--r--. 1 boincer umatlas      6662 Nov 25 02:39 init_data.xml
[2025-11-25 02:41:35] -rw-------. 1 boincer umatlas   1516227 Nov 25 02:40 agis_ddmendpoints.agis.ALL.json
[2025-11-25 02:41:35] -rw-------. 1 boincer umatlas   2309213 Nov 25 02:40 log.47556149._001120.job.log.tgz.1
[2025-11-25 02:41:35] -rw-------. 1 boincer umatlas        95 Nov 25 02:40 pilot_heartbeat.json
[2025-11-25 02:41:35] -rw-------. 1 boincer umatlas      8621 Nov 25 02:40 heartbeat.json
[2025-11-25 02:41:35] -rw-r--r--. 1 boincer umatlas      8192 Nov 25 02:41 boinc_mmap_file
[2025-11-25 02:41:35] -rw-------. 1 boincer umatlas      4824 Nov 25 02:41 pilotlog.txt
[2025-11-25 02:41:35] -rw-r--r--. 1 boincer umatlas        29 Nov 25 02:41 wrapper_checkpoint.txt
[2025-11-25 02:41:35] -rw-------. 1 boincer umatlas   9681943 Nov 25 02:41 log.47556149._001120.job.log.1
[2025-11-25 02:41:35] -rw-------. 1 boincer umatlas       353 Nov 25 02:41 output.list
[2025-11-25 02:41:35] -rw-r--r--. 1 boincer umatlas       620 Nov 25 02:41 runtime_log
[2025-11-25 02:41:35] -rw-------. 1 boincer umatlas  12011520 Nov 25 02:41 result.tar.gz
[2025-11-25 02:41:35] -rw-r--r--. 1 boincer umatlas      9333 Nov 25 02:41 runtime_log.err
[2025-11-25 02:41:35] -rw-------. 1 boincer umatlas       659 Nov 25 02:41 OlXKDm3IDh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm8MIKDmIeKnym.diag
[2025-11-25 02:41:35] -rw-r--r--. 1 boincer umatlas     21167 Nov 25 02:41 stderr.txt
[2025-11-25 02:41:35] HITS file was successfully produced:
[2025-11-25 02:41:35] -rw-------. 1 boincer umatlas 922975060 Nov 25 02:39 shared/HITS.pool.root.1
[2025-11-25 02:41:35]  *** Contents of shared directory: ***
[2025-11-25 02:41:35] total 1315972
[2025-11-25 02:41:35] -rw-r--r--. 2 boincer umatlas 411951066 Nov 24 06:21 ATLAS.root_0
[2025-11-25 02:41:35] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 06:21 start_atlas.sh
[2025-11-25 02:41:35] -rw-r--r--. 2 boincer umatlas    590102 Nov 24 06:21 input.tar.gz
[2025-11-25 02:41:35] -rw-------. 1 boincer umatlas 922975060 Nov 25 02:39 HITS.pool.root.1
[2025-11-25 02:41:35] -rw-------. 1 boincer umatlas  12011520 Nov 25 02:41 result.tar.gz
02:41:36 (4129941): run_atlas exited; CPU time 301984.065834
02:41:36 (4129941): called boinc_finish(0)

</stderr_txt>
]]>

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