Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:38:44 (1325126): wrapper (7.7.26015): starting
06:38:44 (1325126): wrapper: running run_atlas (--nthreads 12)
[2025-11-24 06:38:44] Arguments: --nthreads 12
[2025-11-24 06:38:44] Threads: 12
[2025-11-24 06:38:44] Checking for CVMFS
[2025-11-24 06:38:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 06:38:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 06:38:44] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 06:38:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 06:38:45] 2.13.3.0 8990 3768 75712 153235 3 56 3468531 4097024 1044 130560 0 2905229 99.990 140907 8960 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2025-11-24 06:38:45] CVMFS is ok
[2025-11-24 06:38:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 06:38:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 06:38:45] Further information can be found at the LHC@home message board.
[2025-11-24 06:38:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 06:38:45] Checking for apptainer binary...
[2025-11-24 06:38:45] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2025-11-24 06:38:45] apptainer is not installed, using version from CVMFS
[2025-11-24 06:38:45] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 06:38:45] pckelar2.cern.ch
[2025-11-24 06:38:45] apptainer works
[2025-11-24 06:38:45] Set ATHENA_PROC_NUMBER=12
[2025-11-24 06:38:45] Set ATHENA_CORE_NUMBER=12
[2025-11-24 06:38:45] Starting ATLAS job with PandaID=6895356832
[2025-11-24 06:38:45] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 19:00:15]  *** The last 200 lines of the pilot log: ***
[2025-11-24 19:00:15] 2025-11-24 17:59:40,415 | INFO     | sum of square deviations: 119638620346.30241
[2025-11-24 19:00:15] 2025-11-24 17:59:40,424 | INFO     | sum of deviations: 1491211769161.0454
[2025-11-24 19:00:15] 2025-11-24 17:59:40,425 | INFO     | time since job start (44444s) is within the limit (172800.0s)
[2025-11-24 19:00:15] 2025-11-24 17:59:40,425 | INFO     | mean x: 1763984938.2664835
[2025-11-24 19:00:15] 2025-11-24 17:59:40,425 | INFO     | mean y: 3543107.3296703296
[2025-11-24 19:00:15] 2025-11-24 17:59:40,425 | INFO     | intersect: -21983296033.34
[2025-11-24 19:00:15] 2025-11-24 17:59:40,426 | INFO     | chi2: 6.667977970762632
[2025-11-24 19:00:15] 2025-11-24 17:59:40,427 | INFO     | sum of square deviations: 117190595793.34454
[2025-11-24 19:00:15] 2025-11-24 17:59:40,436 | INFO     | sum of deviations: 1747988084288.9868
[2025-11-24 19:00:15] 2025-11-24 17:59:40,436 | INFO     | mean x: 1763984785.7717843
[2025-11-24 19:00:15] 2025-11-24 17:59:40,436 | INFO     | mean y: 3559093.048409405
[2025-11-24 19:00:15] 2025-11-24 17:59:40,437 | INFO     | intersect: -26307633929.926674
[2025-11-24 19:00:15] 2025-11-24 17:59:40,437 | INFO     | chi2: 4.196941962789332
[2025-11-24 19:00:15] 2025-11-24 17:59:40,437 | INFO     | current chi2=4.196941962789332 (change=37.05825092416558 %)
[2025-11-24 19:00:15] 2025-11-24 17:59:40,438 | INFO     | sum of square deviations: 114776199777.84633
[2025-11-24 19:00:15] 2025-11-24 17:59:40,447 | INFO     | sum of deviations: 1938220625834.7656
[2025-11-24 19:00:15] 2025-11-24 17:59:40,447 | INFO     | mean x: 1763984633.2771587
[2025-11-24 19:00:15] 2025-11-24 17:59:40,448 | INFO     | mean y: 3571105.4735376043
[2025-11-24 19:00:15] 2025-11-24 17:59:40,448 | INFO     | intersect: -29784759632.87597
[2025-11-24 19:00:15] 2025-11-24 17:59:40,448 | INFO     | chi2: 2.762354767535296
[2025-11-24 19:00:15] 2025-11-24 17:59:40,448 | INFO     | current chi2=2.762354767535296 (change=34.18172583688992 %)
[2025-11-24 19:00:15] 2025-11-24 17:59:40,449 | INFO     | sum of square deviations: 112395156183.8693
[2025-11-24 19:00:15] 2025-11-24 17:59:40,458 | INFO     | sum of deviations: 1975438694244.9648
[2025-11-24 19:00:15] 2025-11-24 17:59:40,458 | INFO     | mean x: 1763984480.7812061
[2025-11-24 19:00:15] 2025-11-24 17:59:40,458 | INFO     | mean y: 3573478.92286115
[2025-11-24 19:00:15] 2025-11-24 17:59:40,459 | INFO     | intersect: -30999926295.410973
[2025-11-24 19:00:15] 2025-11-24 17:59:40,459 | INFO     | chi2: 2.5526025565368915
[2025-11-24 19:00:15] 2025-11-24 17:59:40,459 | INFO     | current chi2=2.5526025565368915 (change=7.593239415281743 %)
[2025-11-24 19:00:15] 2025-11-24 17:59:40,459 | INFO     | right removable region: 712
[2025-11-24 19:00:15] 2025-11-24 17:59:40,460 | INFO     | sum of square deviations: 117190299577.8887
[2025-11-24 19:00:15] 2025-11-24 17:59:40,466 | INFO     | monitor loop #3283: job 0:6895356832 is in state 'finished'
[2025-11-24 19:00:15] 2025-11-24 17:59:40,470 | INFO     | sum of deviations: 1234717728192.9072
[2025-11-24 19:00:15] 2025-11-24 17:59:40,471 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 19:00:15] 2025-11-24 17:59:40,471 | INFO     | mean x: 1763985090.770401
[2025-11-24 19:00:15] 2025-11-24 17:59:40,471 | INFO     | mean y: 3559059.836791148
[2025-11-24 19:00:15] 2025-11-24 17:59:40,471 | INFO     | intersect: -18581798872.409122
[2025-11-24 19:00:15] 2025-11-24 17:59:40,472 | INFO     | chi2: 4.356211825517644
[2025-11-24 19:00:15] 2025-11-24 17:59:40,472 | INFO     | current chi2=4.356211825517644 (change=34.669672806081365 %)
[2025-11-24 19:00:15] 2025-11-24 17:59:40,473 | INFO     | sum of square deviations: 114775784005.12122
[2025-11-24 19:00:15] 2025-11-24 17:59:40,482 | INFO     | sum of deviations: 1161664051915.431
[2025-11-24 19:00:15] 2025-11-24 17:59:40,482 | INFO     | mean x: 1763985243.2688022
[2025-11-24 19:00:15] 2025-11-24 17:59:40,482 | INFO     | mean y: 3563672.1532033426
[2025-11-24 19:00:15] 2025-11-24 17:59:40,482 | INFO     | intersect: -17850012872.557934
[2025-11-24 19:00:15] 2025-11-24 17:59:40,483 | INFO     | chi2: 4.28388766158914
[2025-11-24 19:00:15] 2025-11-24 17:59:40,483 | INFO     | current chi2=4.28388766158914 (change=1.66025360623756 %)
[2025-11-24 19:00:15] 2025-11-24 17:59:40,483 | INFO     | left removable region: 20
[2025-11-24 19:00:15] 2025-11-24 17:59:40,484 | INFO     | sum of square deviations: 102753550834.91763
[2025-11-24 19:00:15] 2025-11-24 17:59:40,492 | INFO     | sum of deviations: 1544088654363.4055
[2025-11-24 19:00:15] 2025-11-24 17:59:40,492 | INFO     | mean x: 1763985060.284682
[2025-11-24 19:00:15] 2025-11-24 17:59:40,493 | INFO     | mean y: 3601052.5664739884
[2025-11-24 19:00:15] 2025-11-24 17:59:40,493 | INFO     | intersect: -26503992076.045322
[2025-11-24 19:00:15] 2025-11-24 17:59:40,493 | INFO     | chi2: 0.13028864145404462
[2025-11-24 19:00:15] 2025-11-24 17:59:40,493 | INFO     | current memory leak: 15.03 B/s (using 692 data points, chi2=0.13)
[2025-11-24 19:00:15] 2025-11-24 17:59:40,494 | INFO     | could have reported an average CPU frequency of 2802 MHz (28 samples)
[2025-11-24 19:00:15] 2025-11-24 17:59:40,494 | INFO     | ..............................
[2025-11-24 19:00:15] 2025-11-24 17:59:40,494 | INFO     | . Timing measurements:
[2025-11-24 19:00:15] 2025-11-24 17:59:40,494 | INFO     | . get job = 0 s
[2025-11-24 19:00:15] 2025-11-24 17:59:40,495 | INFO     | . initial setup = 1 s
[2025-11-24 19:00:15] 2025-11-24 17:59:40,495 | INFO     | . payload setup = 7 s
[2025-11-24 19:00:15] 2025-11-24 17:59:40,495 | INFO     | . stage-in = 0 s
[2025-11-24 19:00:15] 2025-11-24 17:59:40,495 | INFO     | . payload execution = 44406 s
[2025-11-24 19:00:15] 2025-11-24 17:59:40,495 | INFO     | . stage-out = 2 s
[2025-11-24 19:00:15] 2025-11-24 17:59:40,495 | INFO     | . log creation = 0 s
[2025-11-24 19:00:15] 2025-11-24 17:59:40,495 | INFO     | ..............................
[2025-11-24 19:00:15] 2025-11-24 17:59:40,566 | INFO     | 
[2025-11-24 19:00:15] 2025-11-24 17:59:40,566 | INFO     | job summary report
[2025-11-24 19:00:15] 2025-11-24 17:59:40,566 | INFO     | --------------------------------------------------
[2025-11-24 19:00:15] 2025-11-24 17:59:40,567 | INFO     | PanDA job id: 6895356832
[2025-11-24 19:00:15] 2025-11-24 17:59:40,567 | INFO     | task id: 47556137
[2025-11-24 19:00:15] 2025-11-24 17:59:40,567 | INFO     | errors: (none)
[2025-11-24 19:00:15] 2025-11-24 17:59:40,567 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 19:00:15] 2025-11-24 17:59:40,567 | INFO     | pilot state: finished 
[2025-11-24 19:00:15] 2025-11-24 17:59:40,567 | INFO     | transexitcode: 0
[2025-11-24 19:00:15] 2025-11-24 17:59:40,568 | INFO     | exeerrorcode: 0
[2025-11-24 19:00:15] 2025-11-24 17:59:40,568 | INFO     | exeerrordiag: 
[2025-11-24 19:00:15] 2025-11-24 17:59:40,568 | INFO     | exitcode: 0
[2025-11-24 19:00:15] 2025-11-24 17:59:40,568 | INFO     | exitmsg: OK
[2025-11-24 19:00:15] 2025-11-24 17:59:40,568 | INFO     | cpuconsumptiontime: 511057 s
[2025-11-24 19:00:15] 2025-11-24 17:59:40,568 | INFO     | nevents: 1000
[2025-11-24 19:00:15] 2025-11-24 17:59:40,568 | INFO     | neventsw: 0
[2025-11-24 19:00:15] 2025-11-24 17:59:40,569 | INFO     | pid: 1336805
[2025-11-24 19:00:15] 2025-11-24 17:59:40,569 | INFO     | pgrp: 1336805
[2025-11-24 19:00:15] 2025-11-24 17:59:40,569 | INFO     | corecount: 12
[2025-11-24 19:00:15] 2025-11-24 17:59:40,569 | INFO     | event service: False
[2025-11-24 19:00:15] 2025-11-24 17:59:40,569 | INFO     | sizes: {0: 2298807, 1: 2298807, 4: 2299097, 11: 2299125, 44418: 2344820, 44419: 2344819, 44421: 2354788, 44423: 2354844, 44428: 2355090}
[2025-11-24 19:00:15] 2025-11-24 17:59:40,569 | INFO     | --------------------------------------------------
[2025-11-24 19:00:15] 2025-11-24 17:59:40,570 | INFO     | 
[2025-11-24 19:00:15] 2025-11-24 17:59:40,570 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-11-24 19:00:15] 2025-11-24 17:59:40,589 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 19:00:15] 2025-11-24 17:59:40,589 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 19:00:15] 2025-11-24 17:59:40,589 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 19:00:15] 2025-11-24 17:59:40,589 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 19:00:15] 2025-11-24 17:59:40,589 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 19:00:15] 2025-11-24 17:59:40,589 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 19:00:15] 2025-11-24 17:59:40,589 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 19:00:15] 2025-11-24 17:59:40,590 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 19:00:15] 2025-11-24 17:59:40,590 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 19:00:15] 2025-11-24 17:59:40,590 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 19:00:15] 2025-11-24 17:59:40,590 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 19:00:15] 2025-11-24 17:59:40,590 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 19:00:15] 2025-11-24 17:59:40,590 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 19:00:15] 2025-11-24 17:59:40,590 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 19:00:15] 2025-11-24 17:59:40,590 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 19:00:15] 2025-11-24 17:59:40,590 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 19:00:15] 2025-11-24 17:59:40,590 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 19:00:15] 2025-11-24 17:59:40,590 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 19:00:15] 2025-11-24 17:59:40,591 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 19:00:15] 2025-11-24 17:59:40,591 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 19:00:15] 2025-11-24 17:59:40,591 | INFO     | job 6895356832 has completed (purged errors)
[2025-11-24 19:00:15] 2025-11-24 17:59:40,591 | INFO     | overall cleanup function is called
[2025-11-24 19:00:15] 2025-11-24 17:59:41,607 | INFO     | --- collectZombieJob: --- 10, [1336805]
[2025-11-24 19:00:15] 2025-11-24 17:59:41,607 | INFO     | zombie collector waiting for pid 1336805
[2025-11-24 19:00:15] 2025-11-24 17:59:41,608 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 19:00:15] 2025-11-24 17:59:41,608 | INFO     | collected zombie processes
[2025-11-24 19:00:15] 2025-11-24 17:59:41,608 | INFO     | will attempt to kill all subprocesses of pid=1336805
[2025-11-24 19:00:15] 2025-11-24 17:59:41,751 | INFO     | process IDs to be killed: [1336805] (in reverse order)
[2025-11-24 19:00:15] 2025-11-24 17:59:41,791 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 19:00:15] 2025-11-24 17:59:41,791 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 19:00:15] 2025-11-24 17:59:41,794 | INFO     | did not find any defunct processes belonging to 1336805
[2025-11-24 19:00:15] 2025-11-24 17:59:41,797 | INFO     | did not find any defunct processes belonging to 1336805
[2025-11-24 19:00:15] 2025-11-24 17:59:41,798 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 19:00:15] 2025-11-24 17:59:41,798 | INFO     | ready for new job
[2025-11-24 19:00:15] 2025-11-24 17:59:41,798 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 19:00:15] 2025-11-24 17:59:41,800 | INFO     | ***************************************
[2025-11-24 19:00:15] 2025-11-24 17:59:41,800 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 19:00:15] 2025-11-24 17:59:41,800 | INFO     | ***************************************
[2025-11-24 19:00:15] 2025-11-24 17:59:41,801 | INFO     | 
[2025-11-24 19:00:15] 2025-11-24 17:59:41,801 | INFO     | architecture information:
[2025-11-24 19:00:15] 2025-11-24 17:59:41,802 | INFO     | executing command: cat /etc/os-release
[2025-11-24 19:00:15] 2025-11-24 17:59:41,811 | INFO     | cat /etc/os-release:
[2025-11-24 19:00:15] NAME="CentOS Linux"
[2025-11-24 19:00:15] VERSION="7 (Core)"
[2025-11-24 19:00:15] ID="centos"
[2025-11-24 19:00:15] ID_LIKE="rhel fedora"
[2025-11-24 19:00:15] VERSION_ID="7"
[2025-11-24 19:00:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 19:00:15] ANSI_COLOR="0;31"
[2025-11-24 19:00:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 19:00:15] HOME_URL="https://www.centos.org/"
[2025-11-24 19:00:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 19:00:15] 
[2025-11-24 19:00:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 19:00:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 19:00:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 19:00:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 19:00:15] 
[2025-11-24 19:00:15] 2025-11-24 17:59:41,811 | INFO     | ***************************************
[2025-11-24 19:00:15] 2025-11-24 17:59:42,314 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-11-24 19:00:15] 2025-11-24 17:59:42,331 | INFO     | sufficient remaining disk space (230871269376 B)
[2025-11-24 19:00:15] 2025-11-24 17:59:42,331 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 19:00:15] 2025-11-24 17:59:42,332 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 19:00:15] 2025-11-24 17:59:42,332 | INFO     | update_server=False
[2025-11-24 19:00:15] 2025-11-24 17:59:42,332 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 19:00:15] 2025-11-24 17:59:42,332 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-24 19:00:15] 2025-11-24 17:59:42,333 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 19:00:15] 2025-11-24 17:59:42,333 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 19:00:15] 2025-11-24 17:59:42,333 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 19:00:15] 2025-11-24 17:59:42,334 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 19:00:15] 2025-11-24 17:59:42,334 | INFO     | aborting loop
[2025-11-24 19:00:15] 2025-11-24 17:59:42,334 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 19:00:15] 2025-11-24 17:59:42,335 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 19:00:15] 2025-11-24 17:59:42,615 | INFO     | all payload control threads have been joined
[2025-11-24 19:00:15] 2025-11-24 17:59:43,338 | INFO     | [job] retrieve thread has finished
[2025-11-24 19:00:15] 2025-11-24 17:59:43,339 | INFO     | [job] queue monitor thread has finished
[2025-11-24 19:00:15] 2025-11-24 17:59:43,340 | INFO     | [job] job monitor thread has finished
[2025-11-24 19:00:15] 2025-11-24 17:59:43,371 | INFO     | all data control threads have been joined
[2025-11-24 19:00:15] 2025-11-24 17:59:43,546 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 19:00:15] 2025-11-24 17:59:43,621 | INFO     | [payload] control thread has finished
[2025-11-24 19:00:15] 2025-11-24 17:59:43,857 | INFO     | [data] copytool_in thread has finished
[2025-11-24 19:00:15] 2025-11-24 17:59:43,895 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 19:00:15] 2025-11-24 17:59:44,017 | INFO     | all job control threads have been joined
[2025-11-24 19:00:15] 2025-11-24 17:59:44,034 | INFO     | [payload] failed_post thread has finished
[2025-11-24 19:00:15] 2025-11-24 17:59:44,282 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 19:00:15] 2025-11-24 17:59:44,340 | INFO     | [data] copytool_out thread has finished
[2025-11-24 19:00:15] 2025-11-24 17:59:44,377 | INFO     | [data] control thread has finished
[2025-11-24 19:00:15] 2025-11-24 17:59:44,445 | INFO     | [job] validate thread has finished
[2025-11-24 19:00:15] 2025-11-24 17:59:44,872 | INFO     | [payload] validate_post thread has finished
[2025-11-24 19:00:15] 2025-11-24 17:59:45,023 | INFO     | [job] control thread has finished
[2025-11-24 19:00:15] 2025-11-24 17:59:45,585 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 19:00:15] 2025-11-24 17:59:49,592 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 19:00:15] 2025-11-24 17:59:52,591 | INFO     | job.realtimelogging is not enabled
[2025-11-24 19:00:15] 2025-11-24 17:59:53,597 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 19:00:15] 2025-11-24 18:00:10,181 | INFO     | [monitor] cgroup control has ended
[2025-11-24 19:00:15] 2025-11-24 18:00:10,673 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139932501108544)>', '<ExcThread(monitor, started 139931955480320)>']
[2025-11-24 19:00:15] 2025-11-24 18:00:11,472 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 19:00:15] 2025-11-24 18:00:11,473 | INFO     | [monitor] control thread has ended
[2025-11-24 19:00:15] 2025-11-24 18:00:15,683 | INFO     | all workflow threads have been joined
[2025-11-24 19:00:15] 2025-11-24 18:00:15,683 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 19:00:15] 2025-11-24 18:00:15,684 | INFO     | traces error code: 0
[2025-11-24 19:00:15] 2025-11-24 18:00:15,684 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 19:00:15] 2025-11-24 18:00:15,811 [wrapper] ==== pilot stdout END ====
[2025-11-24 19:00:15] 2025-11-24 18:00:15,814 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 19:00:15] 2025-11-24 18:00:15,816 [wrapper] pilotpid: 1329303
[2025-11-24 19:00:15] 2025-11-24 18:00:15,819 [wrapper] Pilot exit status: 0
[2025-11-24 19:00:15] 2025-11-24 18:00:15,829 [wrapper] pandaids: 6895356832
[2025-11-24 19:00:15] 2025-11-24 18:00:15,866 [wrapper] cleanup supervisor_pilot 1582686 1329304
[2025-11-24 19:00:15] 2025-11-24 18:00:15,869 [wrapper] Test setup, not cleaning
[2025-11-24 19:00:15] 2025-11-24 18:00:15,871 [wrapper] apfmon messages muted
[2025-11-24 19:00:15] 2025-11-24 18:00:15,874 [wrapper] ==== wrapper stdout END ====
[2025-11-24 19:00:15] 2025-11-24 18:00:15,877 [wrapper] ==== wrapper stderr END ====
[2025-11-24 19:00:15]  *** Error codes and diagnostics ***
[2025-11-24 19:00:15]     "exeErrorCode": 0,
[2025-11-24 19:00:15]     "exeErrorDiag": "",
[2025-11-24 19:00:15]     "pilotErrorCode": 0,
[2025-11-24 19:00:15]     "pilotErrorDiag": "",
[2025-11-24 19:00:15]  *** Listing of results directory ***
[2025-11-24 19:00:15] total 1330236
[2025-11-24 19:00:15] -rw-r--r-- 1 boinc boinc    576529 Nov 23 12:12 pilot3.tar.gz
[2025-11-24 19:00:15] -rwx------ 1 boinc boinc     36292 Nov 23 12:30 runpilot2-wrapper.sh
[2025-11-24 19:00:15] -rw-r--r-- 1 boinc boinc      5112 Nov 23 12:30 queuedata.json
[2025-11-24 19:00:15] -rw-r--r-- 1 boinc boinc       100 Nov 24 06:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 19:00:15] -rwxr-xr-x 1 boinc boinc      7986 Nov 24 06:38 run_atlas
[2025-11-24 19:00:15] -rw-r--r-- 1 boinc boinc       105 Nov 24 06:38 job.xml
[2025-11-24 19:00:15] -rw-r--r-- 1 boinc boinc      6295 Nov 24 06:38 init_data.xml
[2025-11-24 19:00:15] -rw-r--r-- 2 boinc boinc 411092856 Nov 24 06:38 EVNT.47483658._000707.pool.root.1
[2025-11-24 19:00:15] -rw-r--r-- 2 boinc boinc     15847 Nov 24 06:38 start_atlas.sh
[2025-11-24 19:00:15] drwxrwx--x 2 boinc boinc        68 Nov 24 06:38 shared
[2025-11-24 19:00:15] -rw-r--r-- 2 boinc boinc    590110 Nov 24 06:38 input.tar.gz
[2025-11-24 19:00:15] -rw-r--r-- 1 boinc boinc         0 Nov 24 06:38 boinc_lockfile
[2025-11-24 19:00:15] -rw-r--r-- 1 boinc boinc      2786 Nov 24 06:38 pandaJob.out
[2025-11-24 19:00:15] -rw------- 1 boinc boinc    989786 Nov 24 06:38 agis_schedconf.cvmfs.json
[2025-11-24 19:00:15] drwx------ 5 boinc boinc      4096 Nov 24 06:38 pilot3
[2025-11-24 19:00:15] -rw-r--r-- 1 boinc boinc       532 Nov 24 18:43 boinc_task_state.xml
[2025-11-24 19:00:15] -rw------- 1 boinc boinc 929676886 Nov 24 18:58 HITS.47556137._007026.pool.root.1
[2025-11-24 19:00:15] -rw------- 1 boinc boinc        95 Nov 24 18:59 pilot_heartbeat.json
[2025-11-24 19:00:15] -rw------- 1 boinc boinc      1033 Nov 24 18:59 memory_monitor_summary.json
[2025-11-24 19:00:15] -rw------- 1 boinc boinc   1516227 Nov 24 18:59 agis_ddmendpoints.agis.ALL.json
[2025-11-24 19:00:15] -rw------- 1 boinc boinc   2429556 Nov 24 18:59 log.47556137._007026.job.log.tgz.1
[2025-11-24 19:00:15] -rw------- 1 boinc boinc      8607 Nov 24 18:59 heartbeat.json
[2025-11-24 19:00:15] -rw-r--r-- 1 boinc boinc      8192 Nov 24 18:59 boinc_mmap_file
[2025-11-24 19:00:15] -rw-r--r-- 1 boinc boinc        29 Nov 24 18:59 wrapper_checkpoint.txt
[2025-11-24 19:00:15] -rw------- 1 boinc boinc      4625 Nov 24 19:00 pilotlog.txt
[2025-11-24 19:00:15] -rw------- 1 boinc boinc   6313627 Nov 24 19:00 log.47556137._007026.job.log.1
[2025-11-24 19:00:15] -rw------- 1 boinc boinc       353 Nov 24 19:00 output.list
[2025-11-24 19:00:15] -rw-r--r-- 1 boinc boinc       620 Nov 24 19:00 runtime_log
[2025-11-24 19:00:15] -rw------- 1 boinc boinc   8765440 Nov 24 19:00 result.tar.gz
[2025-11-24 19:00:15] -rw-r--r-- 1 boinc boinc      8842 Nov 24 19:00 runtime_log.err
[2025-11-24 19:00:15] -rw------- 1 boinc boinc       666 Nov 24 19:00 bY3MDmuTNh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmfqKKDmd2ft4m.diag
[2025-11-24 19:00:15] -rw-r--r-- 1 boinc boinc     21246 Nov 24 19:00 stderr.txt
[2025-11-24 19:00:16] HITS file was successfully produced:
[2025-11-24 19:00:16] -rw------- 1 boinc boinc 929676886 Nov 24 18:58 shared/HITS.pool.root.1
[2025-11-24 19:00:16]  *** Contents of shared directory: ***
[2025-11-24 19:00:16] total 1318504
[2025-11-24 19:00:16] -rw-r--r-- 2 boinc boinc 411092856 Nov 24 06:38 ATLAS.root_0
[2025-11-24 19:00:16] -rw-r--r-- 2 boinc boinc     15847 Nov 24 06:38 start_atlas.sh
[2025-11-24 19:00:16] -rw-r--r-- 2 boinc boinc    590110 Nov 24 06:38 input.tar.gz
[2025-11-24 19:00:16] -rw------- 1 boinc boinc 929676886 Nov 24 18:58 HITS.pool.root.1
[2025-11-24 19:00:16] -rw------- 1 boinc boinc   8765440 Nov 24 19:00 result.tar.gz
19:00:17 (1325126): run_atlas exited; CPU time 509828.114203
19:00:17 (1325126): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN