Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
09:21:32 (847359): wrapper (7.7.26015): starting
09:21:32 (847359): wrapper: running run_atlas (--nthreads 8)
[2025-11-24 09:21:32] Arguments: --nthreads 8
[2025-11-24 09:21:32] Threads: 8
[2025-11-24 09:21:32] Checking for CVMFS
[2025-11-24 09:21:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 09:21:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 09:21:32] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 09:21:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 09:21:32] 2.13.2.0 540105 2382 46780 153240 3 80 2921851 4096001 0 130560 0 855887 99.981 77840 557 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch DIRECT 1
[2025-11-24 09:21:32] CVMFS is ok
[2025-11-24 09:21:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 09:21:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 09:21:32] Small home clusters do not require a local http proxy but it is suggested if
[2025-11-24 09:21:32] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-11-24 09:21:32] Further information can be found at the LHC@home message board.
[2025-11-24 09:21:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 09:21:32] Checking for apptainer binary...
[2025-11-24 09:21:32] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 09:21:32] Running /usr/bin/apptainer --version
[2025-11-24 09:21:33] apptainer version 1.4.3
[2025-11-24 09:21:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 09:21:33] lab01ubuntu
[2025-11-24 09:21:33] apptainer works
[2025-11-24 09:21:33] Set ATHENA_PROC_NUMBER=8
[2025-11-24 09:21:33] Set ATHENA_CORE_NUMBER=8
[2025-11-24 09:21:33] Starting ATLAS job with PandaID=6895356982
[2025-11-24 09:21:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 19:09:26]  *** The last 200 lines of the pilot log: ***
[2025-11-24 19:09:26] 2025-11-24 19:08:46,122 | INFO     | monitor loop #2658: job 0:6895356982 is in state 'finished'
[2025-11-24 19:09:26] 2025-11-24 19:08:46,122 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 19:09:26] 2025-11-24 19:08:46,527 | INFO     | time since job start (35206s) is within the limit (172800.0s)
[2025-11-24 19:09:26] 2025-11-24 19:08:48,534 | INFO     | time since job start (35208s) is within the limit (172800.0s)
[2025-11-24 19:09:26] 2025-11-24 19:08:48,626 | INFO     | monitor loop #2659: job 0:6895356982 is in state 'finished'
[2025-11-24 19:09:26] 2025-11-24 19:08:48,627 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 19:09:26] 2025-11-24 19:08:50,540 | INFO     | time since job start (35210s) is within the limit (172800.0s)
[2025-11-24 19:09:26] 2025-11-24 19:08:51,131 | INFO     | monitor loop #2660: job 0:6895356982 is in state 'finished'
[2025-11-24 19:09:26] 2025-11-24 19:08:51,131 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 19:09:26] 2025-11-24 19:08:52,547 | INFO     | time since job start (35212s) is within the limit (172800.0s)
[2025-11-24 19:09:26] 2025-11-24 19:08:52,688 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-24 19:09:26] 2025-11-24 19:08:52,690 | INFO     | found 8 cores (8 cores per socket, 1 socket) , CPU MHz: 2893.0279999999993
[2025-11-24 19:09:26] 2025-11-24 19:08:52,693 | INFO     | using path: /var/lib/boinc-client/slots/3/PanDA_Pilot-6895356982/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 19:09:26] 2025-11-24 19:08:52,695 | INFO     | extracted standard info from prmon json
[2025-11-24 19:09:26] 2025-11-24 19:08:52,695 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 19:09:26] 2025-11-24 19:08:52,695 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 19:09:26] 2025-11-24 19:08:52,715 | INFO     | fitting pss+swap vs Time
[2025-11-24 19:09:26] 2025-11-24 19:08:52,717 | INFO     | sum of square deviations: 59257690123.99819
[2025-11-24 19:09:26] 2025-11-24 19:08:52,733 | INFO     | sum of deviations: 581567925287.0756
[2025-11-24 19:09:26] 2025-11-24 19:08:52,734 | INFO     | mean x: 1763993722.5017362
[2025-11-24 19:09:26] 2025-11-24 19:08:52,734 | INFO     | mean y: 2854662.425347222
[2025-11-24 19:09:26] 2025-11-24 19:08:52,735 | INFO     | intersect: -17309365359.449894
[2025-11-24 19:09:26] 2025-11-24 19:08:52,736 | INFO     | chi2: 13.515510519231336
[2025-11-24 19:09:26] 2025-11-24 19:08:52,738 | INFO     | sum of square deviations: 57727875698.99838
[2025-11-24 19:09:26] 2025-11-24 19:08:52,753 | INFO     | sum of deviations: 765550885497.7645
[2025-11-24 19:09:26] 2025-11-24 19:08:52,754 | INFO     | mean x: 1763993570.0017514
[2025-11-24 19:09:26] 2025-11-24 19:08:52,754 | INFO     | mean y: 2873004.234676007
[2025-11-24 19:09:26] 2025-11-24 19:08:52,754 | INFO     | intersect: -23390103494.1303
[2025-11-24 19:09:26] 2025-11-24 19:08:52,754 | INFO     | chi2: 10.561229373684409
[2025-11-24 19:09:26] 2025-11-24 19:08:52,755 | INFO     | current chi2=10.561229373684409 (change=21.85845026973458 %)
[2025-11-24 19:09:26] 2025-11-24 19:08:52,755 | INFO     | right removable region: 570
[2025-11-24 19:09:26] 2025-11-24 19:08:52,755 | INFO     | sum of square deviations: 57727875088.99838
[2025-11-24 19:09:26] 2025-11-24 19:08:52,762 | INFO     | sum of deviations: 374215895981.30536
[2025-11-24 19:09:26] 2025-11-24 19:08:52,762 | INFO     | mean x: 1763993875.0017514
[2025-11-24 19:09:26] 2025-11-24 19:08:52,762 | INFO     | mean y: 2875321.695271454
[2025-11-24 19:09:26] 2025-11-24 19:08:52,762 | INFO     | intersect: -11432060528.994268
[2025-11-24 19:09:26] 2025-11-24 19:08:52,763 | INFO     | chi2: 10.020282426771153
[2025-11-24 19:09:26] 2025-11-24 19:08:52,763 | INFO     | current chi2=10.020282426771153 (change=25.860866206176915 %)
[2025-11-24 19:09:26] 2025-11-24 19:08:52,763 | INFO     | sum of square deviations: 56224618691.4981
[2025-11-24 19:09:26] 2025-11-24 19:08:52,770 | INFO     | sum of deviations: 212632088107.78748
[2025-11-24 19:09:26] 2025-11-24 19:08:52,770 | INFO     | mean x: 1763994027.5017667
[2025-11-24 19:09:26] 2025-11-24 19:08:52,770 | INFO     | mean y: 2891710.7120141345
[2025-11-24 19:09:26] 2025-11-24 19:08:52,770 | INFO     | intersect: -6668238164.537523
[2025-11-24 19:09:26] 2025-11-24 19:08:52,770 | INFO     | chi2: 8.03360281427357
[2025-11-24 19:09:26] 2025-11-24 19:08:52,771 | INFO     | current chi2=8.03360281427357 (change=19.8265830031874 %)
[2025-11-24 19:09:26] 2025-11-24 19:08:52,771 | INFO     | left removable region: 20
[2025-11-24 19:09:26] 2025-11-24 19:08:52,771 | INFO     | sum of square deviations: 51589964107.49794
[2025-11-24 19:09:26] 2025-11-24 19:08:52,777 | INFO     | sum of deviations: 276385073122.15717
[2025-11-24 19:09:26] 2025-11-24 19:08:52,777 | INFO     | mean x: 1763994149.5018182
[2025-11-24 19:09:26] 2025-11-24 19:08:52,777 | INFO     | mean y: 2932893.3436363637
[2025-11-24 19:09:26] 2025-11-24 19:08:52,777 | INFO     | intersect: -9447386765.364162
[2025-11-24 19:09:26] 2025-11-24 19:08:52,778 | INFO     | chi2: 2.7156233738254034
[2025-11-24 19:09:26] 2025-11-24 19:08:52,778 | INFO     | current memory leak: 5.36 B/s (using 550 data points, chi2=2.72)
[2025-11-24 19:09:26] 2025-11-24 19:08:52,779 | INFO     | could have reported an average CPU frequency of 2893 MHz (23 samples)
[2025-11-24 19:09:26] 2025-11-24 19:08:52,779 | INFO     | ..............................
[2025-11-24 19:09:26] 2025-11-24 19:08:52,779 | INFO     | . Timing measurements:
[2025-11-24 19:09:26] 2025-11-24 19:08:52,779 | INFO     | . get job = 0 s
[2025-11-24 19:09:26] 2025-11-24 19:08:52,779 | INFO     | . initial setup = 4 s
[2025-11-24 19:09:26] 2025-11-24 19:08:52,779 | INFO     | . payload setup = 17 s
[2025-11-24 19:09:26] 2025-11-24 19:08:52,779 | INFO     | . stage-in = 0 s
[2025-11-24 19:09:26] 2025-11-24 19:08:52,779 | INFO     | . payload execution = 35131 s
[2025-11-24 19:09:26] 2025-11-24 19:08:52,780 | INFO     | . stage-out = 4 s
[2025-11-24 19:09:26] 2025-11-24 19:08:52,780 | INFO     | . log creation = 0 s
[2025-11-24 19:09:26] 2025-11-24 19:08:52,780 | INFO     | ..............................
[2025-11-24 19:09:26] 2025-11-24 19:08:52,853 | INFO     | 
[2025-11-24 19:09:26] 2025-11-24 19:08:52,853 | INFO     | job summary report
[2025-11-24 19:09:26] 2025-11-24 19:08:52,853 | INFO     | --------------------------------------------------
[2025-11-24 19:09:26] 2025-11-24 19:08:52,854 | INFO     | PanDA job id: 6895356982
[2025-11-24 19:09:26] 2025-11-24 19:08:52,854 | INFO     | task id: 47556137
[2025-11-24 19:09:26] 2025-11-24 19:08:52,854 | INFO     | errors: (none)
[2025-11-24 19:09:26] 2025-11-24 19:08:52,855 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 19:09:26] 2025-11-24 19:08:52,855 | INFO     | pilot state: finished 
[2025-11-24 19:09:26] 2025-11-24 19:08:52,855 | INFO     | transexitcode: 0
[2025-11-24 19:09:26] 2025-11-24 19:08:52,856 | INFO     | exeerrorcode: 0
[2025-11-24 19:09:26] 2025-11-24 19:08:52,856 | INFO     | exeerrordiag: 
[2025-11-24 19:09:26] 2025-11-24 19:08:52,856 | INFO     | exitcode: 0
[2025-11-24 19:09:26] 2025-11-24 19:08:52,856 | INFO     | exitmsg: OK
[2025-11-24 19:09:26] 2025-11-24 19:08:52,857 | INFO     | cpuconsumptiontime: 268071 s
[2025-11-24 19:09:26] 2025-11-24 19:08:52,857 | INFO     | nevents: 1000
[2025-11-24 19:09:26] 2025-11-24 19:08:52,857 | INFO     | neventsw: 0
[2025-11-24 19:09:26] 2025-11-24 19:08:52,858 | INFO     | pid: 857510
[2025-11-24 19:09:26] 2025-11-24 19:08:52,858 | INFO     | pgrp: 857510
[2025-11-24 19:09:26] 2025-11-24 19:08:52,858 | INFO     | corecount: 8
[2025-11-24 19:09:26] 2025-11-24 19:08:52,858 | INFO     | event service: False
[2025-11-24 19:09:26] 2025-11-24 19:08:52,859 | INFO     | sizes: {0: 2297979, 1: 2298671, 2: 2298870, 13: 2298870, 19: 2299188, 23: 2299216, 35152: 2340784, 35157: 2350583, 35158: 2350667, 35174: 2350913}
[2025-11-24 19:09:26] 2025-11-24 19:08:52,859 | INFO     | --------------------------------------------------
[2025-11-24 19:09:26] 2025-11-24 19:08:52,859 | INFO     | 
[2025-11-24 19:09:26] 2025-11-24 19:08:52,860 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/3
[2025-11-24 19:09:26] 2025-11-24 19:08:52,905 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 19:09:26] 2025-11-24 19:08:52,906 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 19:09:26] 2025-11-24 19:08:52,906 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 19:09:26] 2025-11-24 19:08:52,906 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 19:09:26] 2025-11-24 19:08:52,907 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 19:09:26] 2025-11-24 19:08:52,907 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 19:09:26] 2025-11-24 19:08:52,907 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 19:09:26] 2025-11-24 19:08:52,907 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 19:09:26] 2025-11-24 19:08:52,908 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 19:09:26] 2025-11-24 19:08:52,908 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 19:09:26] 2025-11-24 19:08:52,908 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 19:09:26] 2025-11-24 19:08:52,909 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 19:09:26] 2025-11-24 19:08:52,909 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 19:09:26] 2025-11-24 19:08:52,909 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 19:09:26] 2025-11-24 19:08:52,910 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 19:09:26] 2025-11-24 19:08:52,910 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 19:09:26] 2025-11-24 19:08:52,910 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 19:09:26] 2025-11-24 19:08:52,910 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 19:09:26] 2025-11-24 19:08:52,911 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 19:09:26] 2025-11-24 19:08:52,911 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 19:09:26] 2025-11-24 19:08:52,912 | INFO     | job 6895356982 has completed (purged errors)
[2025-11-24 19:09:26] 2025-11-24 19:08:52,912 | INFO     | overall cleanup function is called
[2025-11-24 19:09:26] 2025-11-24 19:08:53,938 | INFO     | --- collectZombieJob: --- 10, [857510]
[2025-11-24 19:09:26] 2025-11-24 19:08:53,938 | INFO     | zombie collector waiting for pid 857510
[2025-11-24 19:09:26] 2025-11-24 19:08:53,939 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 19:09:26] 2025-11-24 19:08:53,939 | INFO     | collected zombie processes
[2025-11-24 19:09:26] 2025-11-24 19:08:53,939 | INFO     | will attempt to kill all subprocesses of pid=857510
[2025-11-24 19:09:26] 2025-11-24 19:08:54,113 | INFO     | process IDs to be killed: [857510] (in reverse order)
[2025-11-24 19:09:26] 2025-11-24 19:08:54,197 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 19:09:26] 2025-11-24 19:08:54,197 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 19:09:26] 2025-11-24 19:08:54,199 | INFO     | did not find any defunct processes belonging to 857510
[2025-11-24 19:09:26] 2025-11-24 19:08:54,201 | INFO     | did not find any defunct processes belonging to 857510
[2025-11-24 19:09:26] 2025-11-24 19:08:54,203 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 19:09:26] 2025-11-24 19:08:54,203 | INFO     | ready for new job
[2025-11-24 19:09:26] 2025-11-24 19:08:54,203 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 19:09:26] 2025-11-24 19:08:54,206 | INFO     | ***************************************
[2025-11-24 19:09:26] 2025-11-24 19:08:54,206 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 19:09:26] 2025-11-24 19:08:54,207 | INFO     | ***************************************
[2025-11-24 19:09:26] 2025-11-24 19:08:54,207 | INFO     | 
[2025-11-24 19:09:26] 2025-11-24 19:08:54,207 | INFO     | pilot is running in a VM
[2025-11-24 19:09:26] 2025-11-24 19:08:54,207 | INFO     | architecture information:
[2025-11-24 19:09:26] 2025-11-24 19:08:54,208 | INFO     | executing command: cat /etc/os-release
[2025-11-24 19:09:26] 2025-11-24 19:08:54,233 | INFO     | cat /etc/os-release:
[2025-11-24 19:09:26] NAME="CentOS Linux"
[2025-11-24 19:09:26] VERSION="7 (Core)"
[2025-11-24 19:09:26] ID="centos"
[2025-11-24 19:09:26] ID_LIKE="rhel fedora"
[2025-11-24 19:09:26] VERSION_ID="7"
[2025-11-24 19:09:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 19:09:26] ANSI_COLOR="0;31"
[2025-11-24 19:09:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 19:09:26] HOME_URL="https://www.centos.org/"
[2025-11-24 19:09:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 19:09:26] 
[2025-11-24 19:09:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 19:09:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 19:09:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 19:09:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 19:09:26] 
[2025-11-24 19:09:26] 2025-11-24 19:08:54,233 | INFO     | ***************************************
[2025-11-24 19:09:26] 2025-11-24 19:08:54,736 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/3
[2025-11-24 19:09:26] 2025-11-24 19:08:54,806 | INFO     | sufficient remaining disk space (14379122688 B)
[2025-11-24 19:09:26] 2025-11-24 19:08:54,807 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 19:09:26] 2025-11-24 19:08:54,807 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 19:09:26] 2025-11-24 19:08:54,808 | INFO     | update_server=False
[2025-11-24 19:09:26] 2025-11-24 19:08:54,808 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 19:09:26] 2025-11-24 19:08:54,808 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 19:09:26] 2025-11-24 19:08:54,809 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 19:09:26] 2025-11-24 19:08:54,810 | INFO     | aborting loop
[2025-11-24 19:09:26] 2025-11-24 19:08:55,147 | INFO     | all payload control threads have been joined
[2025-11-24 19:09:26] 2025-11-24 19:08:55,485 | INFO     | all job control threads have been joined
[2025-11-24 19:09:26] 2025-11-24 19:08:55,814 | INFO     | [job] retrieve thread has finished
[2025-11-24 19:09:26] 2025-11-24 19:08:55,815 | INFO     | [job] queue monitor thread has finished
[2025-11-24 19:09:26] 2025-11-24 19:08:55,816 | INFO     | [job] job monitor thread has finished
[2025-11-24 19:09:26] 2025-11-24 19:08:55,857 | INFO     | all data control threads have been joined
[2025-11-24 19:09:26] 2025-11-24 19:08:56,153 | INFO     | [payload] control thread has finished
[2025-11-24 19:09:26] 2025-11-24 19:08:56,172 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 19:09:26] 2025-11-24 19:08:56,257 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 19:09:26] 2025-11-24 19:08:56,371 | INFO     | [payload] validate_post thread has finished
[2025-11-24 19:09:26] 2025-11-24 19:08:56,466 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 19:09:26] 2025-11-24 19:08:56,491 | INFO     | [job] control thread has finished
[2025-11-24 19:09:26] 2025-11-24 19:08:56,525 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 19:09:26] 2025-11-24 19:08:56,726 | INFO     | [job] validate thread has finished
[2025-11-24 19:09:26] 2025-11-24 19:08:56,759 | INFO     | [data] copytool_in thread has finished
[2025-11-24 19:09:26] 2025-11-24 19:08:56,769 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 19:09:26] 2025-11-24 19:08:56,863 | INFO     | [data] control thread has finished
[2025-11-24 19:09:26] 2025-11-24 19:08:57,068 | INFO     | [payload] failed_post thread has finished
[2025-11-24 19:09:26] 2025-11-24 19:08:57,227 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 19:09:26] 2025-11-24 19:08:57,315 | INFO     | [monitor] cgroup control has ended
[2025-11-24 19:09:26] 2025-11-24 19:08:58,263 | INFO     | [data] copytool_out thread has finished
[2025-11-24 19:09:26] 2025-11-24 19:09:00,776 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 19:09:26] 2025-11-24 19:09:01,493 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 126876483106624)>', '<ExcThread(monitor, started 126875993097984)>']
[2025-11-24 19:09:26] 2025-11-24 19:09:06,520 | INFO     | all workflow threads have been joined
[2025-11-24 19:09:26] 2025-11-24 19:09:06,520 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 19:09:26] 2025-11-24 19:09:06,521 | INFO     | traces error code: 0
[2025-11-24 19:09:26] 2025-11-24 19:09:06,522 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 19:09:26] 2025-11-24 19:09:25,765 | INFO     | PID=851088 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-24 19:09:26] 2025-11-24 19:09:25,766 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 19:09:26] 2025-11-24 19:09:25,766 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 19:09:26] 2025-11-24 19:09:25,766 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 19:09:26] 2025-11-24 19:09:25,766 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 19:09:26] 2025-11-24 19:09:25,766 | INFO     | [monitor] control thread has ended
[2025-11-24 19:09:26] 2025-11-24 19:09:25,962 [wrapper] ==== pilot stdout END ====
[2025-11-24 19:09:26] 2025-11-24 19:09:25,971 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 19:09:26] 2025-11-24 19:09:25,979 [wrapper] pilotpid: 851088
[2025-11-24 19:09:26] 2025-11-24 19:09:25,987 [wrapper] Pilot exit status: 0
[2025-11-24 19:09:26] 2025-11-24 19:09:26,014 [wrapper] pandaids: 6895356982
[2025-11-24 19:09:26] 2025-11-24 19:09:26,081 [wrapper] cleanup supervisor_pilot  921171 851089
[2025-11-24 19:09:26] 2025-11-24 19:09:26,089 [wrapper] Test setup, not cleaning
[2025-11-24 19:09:26] 2025-11-24 19:09:26,097 [wrapper] apfmon messages muted
[2025-11-24 19:09:26] 2025-11-24 19:09:26,105 [wrapper] ==== wrapper stdout END ====
[2025-11-24 19:09:26] 2025-11-24 19:09:26,113 [wrapper] ==== wrapper stderr END ====
[2025-11-24 19:09:26]  *** Error codes and diagnostics ***
[2025-11-24 19:09:26]     "exeErrorCode": 0,
[2025-11-24 19:09:26]     "exeErrorDiag": "",
[2025-11-24 19:09:26]     "pilotErrorCode": 0,
[2025-11-24 19:09:26]     "pilotErrorDiag": "",
[2025-11-24 19:09:26]  *** Listing of results directory ***
[2025-11-24 19:09:26] total 1315368
[2025-11-24 19:09:26] -rw-r--r-- 1 boinc boinc    576529 Nov 23 11:44 pilot3.tar.gz
[2025-11-24 19:09:26] -rwx------ 1 boinc boinc     36292 Nov 23 11:47 runpilot2-wrapper.sh
[2025-11-24 19:09:26] -rw-r--r-- 1 boinc boinc      5112 Nov 23 11:47 queuedata.json
[2025-11-24 19:09:26] -rw-r--r-- 1 boinc boinc       100 Nov 24 09:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 19:09:26] -rwxr-xr-x 1 boinc boinc      7986 Nov 24 09:21 run_atlas
[2025-11-24 19:09:26] -rw-r--r-- 1 boinc boinc       105 Nov 24 09:21 job.xml
[2025-11-24 19:09:26] -rw-r--r-- 2 boinc boinc 413414833 Nov 24 09:21 EVNT.47483658._000713.pool.root.1
[2025-11-24 19:09:26] -rw-r--r-- 1 boinc boinc      6316 Nov 24 09:21 init_data.xml
[2025-11-24 19:09:26] -rw-r--r-- 2 boinc boinc     15847 Nov 24 09:21 start_atlas.sh
[2025-11-24 19:09:26] drwxrwx--x 2 boinc boinc      4096 Nov 24 09:21 shared
[2025-11-24 19:09:26] -rw-r--r-- 2 boinc boinc    590102 Nov 24 09:21 input.tar.gz
[2025-11-24 19:09:26] -rw-r--r-- 1 boinc boinc         0 Nov 24 09:21 boinc_lockfile
[2025-11-24 19:09:26] -rw-r--r-- 1 boinc boinc      2786 Nov 24 09:21 pandaJob.out
[2025-11-24 19:09:26] -rw------- 1 boinc boinc    989824 Nov 24 09:21 agis_schedconf.cvmfs.json
[2025-11-24 19:09:26] drwx------ 5 boinc boinc      4096 Nov 24 09:22 pilot3
[2025-11-24 19:09:26] -rw-r--r-- 1 boinc boinc       532 Nov 24 18:56 boinc_task_state.xml
[2025-11-24 19:09:26] -rw------- 1 boinc boinc 915926464 Nov 24 19:08 HITS.47556137._007087.pool.root.1
[2025-11-24 19:09:26] -rw------- 1 boinc boinc      1033 Nov 24 19:08 memory_monitor_summary.json
[2025-11-24 19:09:26] -rw------- 1 boinc boinc   1516227 Nov 24 19:08 agis_ddmendpoints.agis.ALL.json
[2025-11-24 19:09:26] -rw------- 1 boinc boinc   1853666 Nov 24 19:08 log.47556137._007087.job.log.tgz.1
[2025-11-24 19:09:26] -rw------- 1 boinc boinc      8592 Nov 24 19:08 heartbeat.json
[2025-11-24 19:09:26] -rw-r--r-- 1 boinc boinc        29 Nov 24 19:09 wrapper_checkpoint.txt
[2025-11-24 19:09:26] -rw-r--r-- 1 boinc boinc      8192 Nov 24 19:09 boinc_mmap_file
[2025-11-24 19:09:26] -rw------- 1 boinc boinc       746 Nov 24 19:09 pilotlog.txt
[2025-11-24 19:09:26] -rw------- 1 boinc boinc        95 Nov 24 19:09 pilot_heartbeat.json
[2025-11-24 19:09:26] -rw------- 1 boinc boinc   4991387 Nov 24 19:09 log.47556137._007087.job.log.1
[2025-11-24 19:09:26] -rw------- 1 boinc boinc       353 Nov 24 19:09 output.list
[2025-11-24 19:09:26] -rw-r--r-- 1 boinc boinc       620 Nov 24 19:09 runtime_log
[2025-11-24 19:09:26] -rw------- 1 boinc boinc   6860800 Nov 24 19:09 result.tar.gz
[2025-11-24 19:09:26] -rw-r--r-- 1 boinc boinc      8904 Nov 24 19:09 runtime_log.err
[2025-11-24 19:09:26] -rw------- 1 boinc boinc       656 Nov 24 19:09 d3uKDmwjNh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmZrKKDmf8oWem.diag
[2025-11-24 19:09:26] -rw-r--r-- 1 boinc boinc     21738 Nov 24 19:09 stderr.txt
[2025-11-24 19:09:26] HITS file was successfully produced:
[2025-11-24 19:09:26] -rw------- 1 boinc boinc 915926464 Nov 24 19:08 shared/HITS.pool.root.1
[2025-11-24 19:09:26]  *** Contents of shared directory: ***
[2025-11-24 19:09:26] total 1305492
[2025-11-24 19:09:26] -rw-r--r-- 2 boinc boinc 413414833 Nov 24 09:21 ATLAS.root_0
[2025-11-24 19:09:26] -rw-r--r-- 2 boinc boinc     15847 Nov 24 09:21 start_atlas.sh
[2025-11-24 19:09:26] -rw-r--r-- 2 boinc boinc    590102 Nov 24 09:21 input.tar.gz
[2025-11-24 19:09:26] -rw------- 1 boinc boinc 915926464 Nov 24 19:08 HITS.pool.root.1
[2025-11-24 19:09:26] -rw------- 1 boinc boinc   6860800 Nov 24 19:09 result.tar.gz
19:09:27 (847359): run_atlas exited; CPU time 267721.522044
19:09:27 (847359): called boinc_finish(0)

</stderr_txt>
]]>

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