Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
01:04:22 (1876429): wrapper (7.7.26015): starting
01:04:22 (1876429): wrapper: running run_atlas (--nthreads 8)
[2025-11-24 01:04:22] Arguments: --nthreads 8
[2025-11-24 01:04:22] Threads: 8
[2025-11-24 01:04:22] Checking for CVMFS
[2025-11-24 01:04:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 01:04:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 01:04:23] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 01:04:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 01:04:25] 2.13.2.0 6051 31142 219204 153235 2 348 38420745 40960001 12149 16776704 0 33347601 99.779 17404865 37449 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-24 01:04:25] CVMFS is ok
[2025-11-24 01:04:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 01:04:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 01:04:25] Further information can be found at the LHC@home message board.
[2025-11-24 01:04:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 01:04:25] Checking for apptainer binary...
[2025-11-24 01:04:25] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 01:04:25] Running /usr/bin/apptainer --version
[2025-11-24 01:04:25] apptainer version 1.4.4-1.el9
[2025-11-24 01:04:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 01:04:25] c-210-37-3.aglt2.org
[2025-11-24 01:04:25] apptainer works
[2025-11-24 01:04:25] Set ATHENA_PROC_NUMBER=8
[2025-11-24 01:04:25] Set ATHENA_CORE_NUMBER=8
[2025-11-24 01:04:25] Starting ATLAS job with PandaID=6895356443
[2025-11-24 01:04:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 19:34:23]  *** The last 200 lines of the pilot log: ***
[2025-11-24 19:34:23] 2025-11-25 00:33:29,866 | INFO     | time since job start (66488s) is within the limit (172800.0s)
[2025-11-24 19:34:23] 2025-11-25 00:33:31,873 | INFO     | time since job start (66490s) is within the limit (172800.0s)
[2025-11-24 19:34:23] 2025-11-25 00:33:32,331 | INFO     | monitor loop #4470: job 0:6895356443 is in state 'finished'
[2025-11-24 19:34:23] 2025-11-25 00:33:32,334 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 19:34:23] 2025-11-25 00:33:33,401 | INFO     | PID=1880961 has CPU usage=12.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-11-24 19:34:23] 2025-11-25 00:33:33,401 | INFO     | .. there are 10 such processes running
[2025-11-24 19:34:23] 2025-11-25 00:33:34,402 | INFO     | time since job start (66493s) is within the limit (172800.0s)
[2025-11-24 19:34:23] 2025-11-25 00:33:34,853 | INFO     | monitor loop #4471: job 0:6895356443 is in state 'finished'
[2025-11-24 19:34:23] 2025-11-25 00:33:34,853 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 19:34:23] 2025-11-25 00:33:36,409 | INFO     | time since job start (66495s) is within the limit (172800.0s)
[2025-11-24 19:34:23] 2025-11-25 00:33:37,358 | INFO     | monitor loop #4472: job 0:6895356443 is in state 'finished'
[2025-11-24 19:34:23] 2025-11-25 00:33:37,358 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 19:34:23] 2025-11-25 00:33:38,417 | INFO     | time since job start (66497s) is within the limit (172800.0s)
[2025-11-24 19:34:23] 2025-11-25 00:33:39,865 | INFO     | monitor loop #4473: job 0:6895356443 is in state 'finished'
[2025-11-24 19:34:23] 2025-11-25 00:33:39,865 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 19:34:23] 2025-11-25 00:33:40,426 | INFO     | time since job start (66499s) is within the limit (172800.0s)
[2025-11-24 19:34:23] 2025-11-25 00:33:41,545 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-24 19:34:23] 2025-11-25 00:33:41,549 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2815.1538571428578
[2025-11-24 19:34:23] 2025-11-25 00:33:41,561 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6895356443/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 19:34:23] 2025-11-25 00:33:41,563 | INFO     | extracted standard info from prmon json
[2025-11-24 19:34:23] 2025-11-25 00:33:41,563 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 19:34:23] 2025-11-25 00:33:41,563 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 19:34:23] 2025-11-25 00:33:41,583 | INFO     | fitting pss+swap vs Time
[2025-11-24 19:34:23] 2025-11-25 00:33:41,585 | INFO     | sum of square deviations: 399318329301.86725
[2025-11-24 19:34:23] 2025-11-25 00:33:41,612 | INFO     | sum of deviations: 3994897501274.5674
[2025-11-24 19:34:23] 2025-11-25 00:33:41,612 | INFO     | mean x: 1763997608.3860295
[2025-11-24 19:34:23] 2025-11-25 00:33:41,613 | INFO     | mean y: 2876247.0772058824
[2025-11-24 19:34:23] 2025-11-25 00:33:41,613 | INFO     | intersect: -17644672389.91122
[2025-11-24 19:34:23] 2025-11-25 00:33:41,614 | INFO     | chi2: 18.73763394475751
[2025-11-24 19:34:23] 2025-11-25 00:33:41,616 | INFO     | sum of square deviations: 393838663270.0297
[2025-11-24 19:34:23] 2025-11-25 00:33:41,641 | INFO     | sum of deviations: 4361455428455.869
[2025-11-24 19:34:23] 2025-11-25 00:33:41,641 | INFO     | mean x: 1763997455.8993537
[2025-11-24 19:34:23] 2025-11-25 00:33:41,642 | INFO     | mean y: 2886450.0997229917
[2025-11-24 19:34:23] 2025-11-25 00:33:41,642 | INFO     | intersect: -19532006889.053158
[2025-11-24 19:34:23] 2025-11-25 00:33:41,643 | INFO     | chi2: 15.604364060617828
[2025-11-24 19:34:23] 2025-11-25 00:33:41,643 | INFO     | current chi2=15.604364060617828 (change=16.72180112695776 %)
[2025-11-24 19:34:23] 2025-11-25 00:33:41,643 | INFO     | right removable region: 1082
[2025-11-24 19:34:23] 2025-11-25 00:33:41,644 | INFO     | sum of square deviations: 393836814120.8275
[2025-11-24 19:34:23] 2025-11-25 00:33:41,818 | INFO     | sum of deviations: 3561778062444.0723
[2025-11-24 19:34:23] 2025-11-25 00:33:41,818 | INFO     | mean x: 1763997760.8984303
[2025-11-24 19:34:23] 2025-11-25 00:33:41,818 | INFO     | mean y: 2888295.627885503
[2025-11-24 19:34:23] 2025-11-25 00:33:41,819 | INFO     | intersect: -15950339797.063583
[2025-11-24 19:34:23] 2025-11-25 00:33:41,824 | INFO     | chi2: 14.461835311769855
[2025-11-24 19:34:23] 2025-11-25 00:33:41,824 | INFO     | current chi2=14.461835311769855 (change=22.819309233991913 %)
[2025-11-24 19:34:23] 2025-11-25 00:33:41,824 | INFO     | left removable region: 10
[2025-11-24 19:34:23] 2025-11-25 00:33:41,826 | INFO     | sum of square deviations: 381956619032.4697
[2025-11-24 19:34:23] 2025-11-25 00:33:42,031 | INFO     | sum of deviations: 3583396921515.922
[2025-11-24 19:34:23] 2025-11-25 00:33:42,057 | INFO     | mean x: 1763997730.4281716
[2025-11-24 19:34:23] 2025-11-25 00:33:42,057 | INFO     | mean y: 2910485.154850746
[2025-11-24 19:34:23] 2025-11-25 00:33:42,058 | INFO     | intersect: -16546361662.004965
[2025-11-24 19:34:23] 2025-11-25 00:33:42,059 | INFO     | chi2: 7.877189972897631
[2025-11-24 19:34:23] 2025-11-25 00:33:42,059 | INFO     | current memory leak: 9.38 B/s (using 1072 data points, chi2=7.88)
[2025-11-24 19:34:23] 2025-11-25 00:33:42,061 | INFO     | could have reported an average CPU frequency of 2785 MHz (40 samples)
[2025-11-24 19:34:23] 2025-11-25 00:33:42,061 | INFO     | ..............................
[2025-11-24 19:34:23] 2025-11-25 00:33:42,098 | INFO     | . Timing measurements:
[2025-11-24 19:34:23] 2025-11-25 00:33:42,098 | INFO     | . get job = 0 s
[2025-11-24 19:34:23] 2025-11-25 00:33:42,098 | INFO     | . initial setup = 3 s
[2025-11-24 19:34:23] 2025-11-25 00:33:42,098 | INFO     | . payload setup = 39 s
[2025-11-24 19:34:23] 2025-11-25 00:33:42,099 | INFO     | . stage-in = 0 s
[2025-11-24 19:34:23] 2025-11-25 00:33:42,099 | INFO     | . payload execution = 66371 s
[2025-11-24 19:34:23] 2025-11-25 00:33:42,099 | INFO     | . stage-out = 4 s
[2025-11-24 19:34:23] 2025-11-25 00:33:42,099 | INFO     | . log creation = 1 s
[2025-11-24 19:34:23] 2025-11-25 00:33:42,099 | INFO     | ..............................
[2025-11-24 19:34:23] 2025-11-25 00:33:42,450 | INFO     | time since job start (66501s) is within the limit (172800.0s)
[2025-11-24 19:34:23] 2025-11-25 00:33:42,802 | INFO     | 
[2025-11-24 19:34:23] 2025-11-25 00:33:42,802 | INFO     | job summary report
[2025-11-24 19:34:23] 2025-11-25 00:33:42,802 | INFO     | --------------------------------------------------
[2025-11-24 19:34:23] 2025-11-25 00:33:42,803 | INFO     | PanDA job id: 6895356443
[2025-11-24 19:34:23] 2025-11-25 00:33:42,803 | INFO     | task id: 47556137
[2025-11-24 19:34:23] 2025-11-25 00:33:42,803 | INFO     | errors: (none)
[2025-11-24 19:34:23] 2025-11-25 00:33:42,803 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 19:34:23] 2025-11-25 00:33:42,803 | INFO     | pilot state: finished 
[2025-11-24 19:34:23] 2025-11-25 00:33:42,803 | INFO     | transexitcode: 0
[2025-11-24 19:34:23] 2025-11-25 00:33:42,803 | INFO     | exeerrorcode: 0
[2025-11-24 19:34:23] 2025-11-25 00:33:42,803 | INFO     | exeerrordiag: 
[2025-11-24 19:34:23] 2025-11-25 00:33:42,803 | INFO     | exitcode: 0
[2025-11-24 19:34:23] 2025-11-25 00:33:42,804 | INFO     | exitmsg: OK
[2025-11-24 19:34:23] 2025-11-25 00:33:42,804 | INFO     | cpuconsumptiontime: 233232 s
[2025-11-24 19:34:23] 2025-11-25 00:33:42,804 | INFO     | nevents: 1000
[2025-11-24 19:34:23] 2025-11-25 00:33:42,804 | INFO     | neventsw: 0
[2025-11-24 19:34:23] 2025-11-25 00:33:42,804 | INFO     | pid: 1887634
[2025-11-24 19:34:23] 2025-11-25 00:33:42,804 | INFO     | pgrp: 1887634
[2025-11-24 19:34:23] 2025-11-25 00:33:42,804 | INFO     | corecount: 8
[2025-11-24 19:34:23] 2025-11-25 00:33:42,804 | INFO     | event service: False
[2025-11-24 19:34:23] 2025-11-25 00:33:42,804 | INFO     | sizes: {0: 2298636, 1: 2298835, 12: 2298835, 23: 2298863, 27: 2299153, 34: 2299181, 66411: 2355704, 66417: 2365489, 66419: 2365545, 66437: 2365791}
[2025-11-24 19:34:23] 2025-11-25 00:33:42,804 | INFO     | --------------------------------------------------
[2025-11-24 19:34:23] 2025-11-25 00:33:42,805 | INFO     | 
[2025-11-24 19:34:23] 2025-11-25 00:33:42,805 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-24 19:34:23] 2025-11-25 00:33:42,828 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 19:34:23] 2025-11-25 00:33:42,829 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 19:34:23] 2025-11-25 00:33:42,829 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 19:34:23] 2025-11-25 00:33:42,829 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 19:34:23] 2025-11-25 00:33:42,829 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 19:34:23] 2025-11-25 00:33:42,829 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 19:34:23] 2025-11-25 00:33:42,829 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 19:34:23] 2025-11-25 00:33:42,829 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 19:34:23] 2025-11-25 00:33:42,829 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 19:34:23] 2025-11-25 00:33:42,829 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 19:34:23] 2025-11-25 00:33:42,829 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 19:34:23] 2025-11-25 00:33:42,829 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 19:34:23] 2025-11-25 00:33:42,830 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 19:34:23] 2025-11-25 00:33:42,830 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 19:34:23] 2025-11-25 00:33:42,830 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 19:34:23] 2025-11-25 00:33:42,830 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 19:34:23] 2025-11-25 00:33:42,830 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 19:34:23] 2025-11-25 00:33:42,830 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 19:34:23] 2025-11-25 00:33:42,830 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 19:34:23] 2025-11-25 00:33:42,830 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 19:34:23] 2025-11-25 00:33:42,830 | INFO     | job 6895356443 has completed (purged errors)
[2025-11-24 19:34:23] 2025-11-25 00:33:42,830 | INFO     | overall cleanup function is called
[2025-11-24 19:34:23] 2025-11-25 00:33:43,846 | INFO     | --- collectZombieJob: --- 10, [1887634]
[2025-11-24 19:34:23] 2025-11-25 00:33:43,846 | INFO     | zombie collector waiting for pid 1887634
[2025-11-24 19:34:23] 2025-11-25 00:33:43,846 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 19:34:23] 2025-11-25 00:33:43,846 | INFO     | collected zombie processes
[2025-11-24 19:34:23] 2025-11-25 00:33:43,846 | INFO     | will attempt to kill all subprocesses of pid=1887634
[2025-11-24 19:34:23] 2025-11-25 00:33:44,252 | INFO     | process IDs to be killed: [1887634] (in reverse order)
[2025-11-24 19:34:23] 2025-11-25 00:33:44,380 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 19:34:23] 2025-11-25 00:33:44,381 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 19:34:23] 2025-11-25 00:33:44,397 | INFO     | did not find any defunct processes belonging to 1887634
[2025-11-24 19:34:23] 2025-11-25 00:33:44,412 | INFO     | did not find any defunct processes belonging to 1887634
[2025-11-24 19:34:23] 2025-11-25 00:33:44,413 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 19:34:23] 2025-11-25 00:33:44,414 | INFO     | ready for new job
[2025-11-24 19:34:23] 2025-11-25 00:33:44,414 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 19:34:23] 2025-11-25 00:33:44,419 | INFO     | ***************************************
[2025-11-24 19:34:23] 2025-11-25 00:33:44,420 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 19:34:23] 2025-11-25 00:33:44,420 | INFO     | ***************************************
[2025-11-24 19:34:23] 2025-11-25 00:33:44,420 | INFO     | 
[2025-11-24 19:34:23] 2025-11-25 00:33:44,423 | INFO     | architecture information:
[2025-11-24 19:34:23] 2025-11-25 00:33:44,424 | INFO     | executing command: cat /etc/os-release
[2025-11-24 19:34:23] 2025-11-25 00:33:44,551 | INFO     | cat /etc/os-release:
[2025-11-24 19:34:23] NAME="CentOS Linux"
[2025-11-24 19:34:23] VERSION="7 (Core)"
[2025-11-24 19:34:23] ID="centos"
[2025-11-24 19:34:23] ID_LIKE="rhel fedora"
[2025-11-24 19:34:23] VERSION_ID="7"
[2025-11-24 19:34:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 19:34:23] ANSI_COLOR="0;31"
[2025-11-24 19:34:23] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 19:34:23] HOME_URL="https://www.centos.org/"
[2025-11-24 19:34:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 19:34:23] 
[2025-11-24 19:34:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 19:34:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 19:34:23] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 19:34:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 19:34:23] 
[2025-11-24 19:34:23] 2025-11-25 00:33:44,552 | INFO     | ***************************************
[2025-11-24 19:34:23] 2025-11-25 00:33:45,055 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-24 19:34:23] 2025-11-25 00:33:45,106 | INFO     | sufficient remaining disk space (71805435904 B)
[2025-11-24 19:34:23] 2025-11-25 00:33:45,106 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 19:34:23] 2025-11-25 00:33:45,106 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 19:34:23] 2025-11-25 00:33:45,107 | INFO     | update_server=False
[2025-11-24 19:34:23] 2025-11-25 00:33:45,107 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 19:34:23] 2025-11-25 00:33:45,107 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 19:34:23] 2025-11-25 00:33:45,339 | INFO     | all payload control threads have been joined
[2025-11-24 19:34:23] 2025-11-25 00:33:45,632 | INFO     | all data control threads have been joined
[2025-11-24 19:34:23] 2025-11-25 00:33:45,915 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 19:34:23] 2025-11-25 00:33:45,915 | INFO     | aborting loop
[2025-11-24 19:34:23] 2025-11-25 00:33:46,112 | INFO     | [job] retrieve thread has finished
[2025-11-24 19:34:23] 2025-11-25 00:33:46,124 | INFO     | [payload] failed_post thread has finished
[2025-11-24 19:34:23] 2025-11-25 00:33:46,217 | INFO     | [payload] validate_post thread has finished
[2025-11-24 19:34:23] 2025-11-25 00:33:46,345 | INFO     | [payload] control thread has finished
[2025-11-24 19:34:23] 2025-11-25 00:33:46,489 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 19:34:23] 2025-11-25 00:33:46,638 | INFO     | [data] control thread has finished
[2025-11-24 19:34:23] 2025-11-25 00:33:46,733 | INFO     | all job control threads have been joined
[2025-11-24 19:34:23] 2025-11-25 00:33:46,761 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 19:34:23] 2025-11-25 00:33:46,762 | INFO     | [data] copytool_in thread has finished
[2025-11-24 19:34:23] 2025-11-25 00:33:46,921 | INFO     | [job] job monitor thread has finished
[2025-11-24 19:34:23] 2025-11-25 00:33:47,095 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 19:34:23] 2025-11-25 00:33:47,114 | INFO     | [data] copytool_out thread has finished
[2025-11-24 19:34:23] 2025-11-25 00:33:47,516 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 19:34:23] 2025-11-25 00:33:47,517 | INFO     | [job] validate thread has finished
[2025-11-24 19:34:23] 2025-11-25 00:33:47,529 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 19:34:23] 2025-11-25 00:33:47,739 | INFO     | [job] control thread has finished
[2025-11-24 19:34:23] 2025-11-25 00:33:47,960 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 19:34:23] 2025-11-25 00:33:48,521 | INFO     | [job] queue monitor thread has finished
[2025-11-24 19:34:23] 2025-11-25 00:33:51,968 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 19:34:23] 2025-11-25 00:34:16,353 | INFO     | [monitor] cgroup control has ended
[2025-11-24 19:34:23] 2025-11-25 00:34:16,694 | INFO     | PID=1880961 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-24 19:34:23] 2025-11-25 00:34:16,695 | INFO     | .. there are 10 such processes running
[2025-11-24 19:34:23] 2025-11-25 00:34:16,695 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 19:34:23] 2025-11-25 00:34:16,695 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 19:34:23] 2025-11-25 00:34:16,696 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 19:34:23] 2025-11-25 00:34:17,549 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140029498746688)>', '<ExcThread(monitor, started 140029003290368)>']
[2025-11-24 19:34:23] 2025-11-25 00:34:17,701 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 19:34:23] 2025-11-25 00:34:17,701 | INFO     | [monitor] control thread has ended
[2025-11-24 19:34:23] 2025-11-25 00:34:22,576 | INFO     | all workflow threads have been joined
[2025-11-24 19:34:23] 2025-11-25 00:34:22,576 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 19:34:23] 2025-11-25 00:34:22,577 | INFO     | traces error code: 0
[2025-11-24 19:34:23] 2025-11-25 00:34:22,577 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 19:34:23] 2025-11-25 00:34:23,027 [wrapper] ==== pilot stdout END ====
[2025-11-24 19:34:23] 2025-11-25 00:34:23,044 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 19:34:23] 2025-11-25 00:34:23,067 [wrapper] pilotpid: 1880961
[2025-11-24 19:34:23] 2025-11-25 00:34:23,082 [wrapper] Pilot exit status: 0
[2025-11-24 19:34:23] 2025-11-25 00:34:23,171 [wrapper] pandaids: 6895356443
[2025-11-24 19:34:23] 2025-11-25 00:34:23,462 [wrapper] cleanup supervisor_pilot 3325702 1880962
[2025-11-24 19:34:23] 2025-11-25 00:34:23,475 [wrapper] Test setup, not cleaning
[2025-11-24 19:34:23] 2025-11-25 00:34:23,492 [wrapper] apfmon messages muted
[2025-11-24 19:34:23] 2025-11-25 00:34:23,510 [wrapper] ==== wrapper stdout END ====
[2025-11-24 19:34:23] 2025-11-25 00:34:23,527 [wrapper] ==== wrapper stderr END ====
[2025-11-24 19:34:23]  *** Error codes and diagnostics ***
[2025-11-24 19:34:23]     "exeErrorCode": 0,
[2025-11-24 19:34:23]     "exeErrorDiag": "",
[2025-11-24 19:34:23]     "pilotErrorCode": 0,
[2025-11-24 19:34:23]     "pilotErrorDiag": "",
[2025-11-24 19:34:24]  *** Listing of results directory ***
[2025-11-24 19:34:24] total 1311348
[2025-11-24 19:34:24] -rw-r--r--. 1 boincer umatlas    576529 Nov 23 06:12 pilot3.tar.gz
[2025-11-24 19:34:24] -rw-r--r--. 1 boincer umatlas      5112 Nov 23 06:18 queuedata.json
[2025-11-24 19:34:24] -rwx------. 1 boincer umatlas     36292 Nov 23 06:18 runpilot2-wrapper.sh
[2025-11-24 19:34:24] -rw-r--r--. 1 boincer umatlas       100 Nov 24 01:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 19:34:24] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 24 01:04 run_atlas
[2025-11-24 19:34:24] -rw-r--r--. 1 boincer umatlas       105 Nov 24 01:04 job.xml
[2025-11-24 19:34:24] -rw-r--r--. 2 boincer umatlas 410123858 Nov 24 01:04 EVNT.47483658._000702.pool.root.1
[2025-11-24 19:34:24] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 01:04 start_atlas.sh
[2025-11-24 19:34:24] drwxrwx--x. 2 boincer umatlas      4096 Nov 24 01:04 shared
[2025-11-24 19:34:24] -rw-r--r--. 2 boincer umatlas    590099 Nov 24 01:04 input.tar.gz
[2025-11-24 19:34:24] -rw-r--r--. 1 boincer umatlas         0 Nov 24 01:04 boinc_lockfile
[2025-11-24 19:34:24] -rw-r--r--. 1 boincer umatlas      2786 Nov 24 01:04 pandaJob.out
[2025-11-24 19:34:24] -rw-------. 1 boincer umatlas        57 Nov 24 01:04 setup.sh.local
[2025-11-24 19:34:24] -rw-------. 1 boincer umatlas    989786 Nov 24 01:05 agis_schedconf.cvmfs.json
[2025-11-24 19:34:24] drwx------. 5 boincer umatlas      4096 Nov 24 01:05 pilot3
[2025-11-24 19:34:24] -rw-r--r--. 1 boincer umatlas       533 Nov 24 19:18 boinc_task_state.xml
[2025-11-24 19:34:24] -rw-r--r--. 1 boincer umatlas      6844 Nov 24 19:28 init_data.xml
[2025-11-24 19:34:24] -rw-------. 1 boincer umatlas 906150515 Nov 24 19:32 HITS.47556137._006973.pool.root.1
[2025-11-24 19:34:24] -rw-------. 1 boincer umatlas      1058 Nov 24 19:33 memory_monitor_summary.json
[2025-11-24 19:34:24] -rw-------. 1 boincer umatlas   1516227 Nov 24 19:33 agis_ddmendpoints.agis.ALL.json
[2025-11-24 19:34:24] -rw-------. 1 boincer umatlas   2271568 Nov 24 19:33 log.47556137._006973.job.log.tgz.1
[2025-11-24 19:34:24] -rw-------. 1 boincer umatlas      8633 Nov 24 19:33 heartbeat.json
[2025-11-24 19:34:24] -rw-------. 1 boincer umatlas        95 Nov 24 19:34 pilot_heartbeat.json
[2025-11-24 19:34:24] -rw-r--r--. 1 boincer umatlas        29 Nov 24 19:34 wrapper_checkpoint.txt
[2025-11-24 19:34:24] -rw-r--r--. 1 boincer umatlas      8192 Nov 24 19:34 boinc_mmap_file
[2025-11-24 19:34:24] -rw-------. 1 boincer umatlas      4824 Nov 24 19:34 pilotlog.txt
[2025-11-24 19:34:24] -rw-------. 1 boincer umatlas   9039380 Nov 24 19:34 log.47556137._006973.job.log.1
[2025-11-24 19:34:24] -rw-------. 1 boincer umatlas       353 Nov 24 19:34 output.list
[2025-11-24 19:34:24] -rw-r--r--. 1 boincer umatlas       620 Nov 24 19:34 runtime_log
[2025-11-24 19:34:24] -rw-------. 1 boincer umatlas  11335680 Nov 24 19:34 result.tar.gz
[2025-11-24 19:34:24] -rw-r--r--. 1 boincer umatlas      9353 Nov 24 19:34 runtime_log.err
[2025-11-24 19:34:24] -rw-------. 1 boincer umatlas       662 Nov 24 19:34 1i8LDm0HNh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmQpKKDm2nbTAn.diag
[2025-11-24 19:34:24] -rw-r--r--. 1 boincer umatlas     21868 Nov 24 19:34 stderr.txt
[2025-11-24 19:34:24] HITS file was successfully produced:
[2025-11-24 19:34:24] -rw-------. 1 boincer umatlas 906150515 Nov 24 19:32 shared/HITS.pool.root.1
[2025-11-24 19:34:24]  *** Contents of shared directory: ***
[2025-11-24 19:34:24] total 1297104
[2025-11-24 19:34:24] -rw-r--r--. 2 boincer umatlas 410123858 Nov 24 01:04 ATLAS.root_0
[2025-11-24 19:34:24] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 01:04 start_atlas.sh
[2025-11-24 19:34:24] -rw-r--r--. 2 boincer umatlas    590099 Nov 24 01:04 input.tar.gz
[2025-11-24 19:34:24] -rw-------. 1 boincer umatlas 906150515 Nov 24 19:32 HITS.pool.root.1
[2025-11-24 19:34:24] -rw-------. 1 boincer umatlas  11335680 Nov 24 19:34 result.tar.gz
19:34:25 (1876429): run_atlas exited; CPU time 233738.333171
19:34:25 (1876429): called boinc_finish(0)

</stderr_txt>
]]>

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