Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:13:04 (927403): wrapper (7.7.26015): starting
00:13:04 (927403): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 00:13:04] Arguments: --nthreads 8
[2025-11-25 00:13:04] Threads: 8
[2025-11-25 00:13:04] Checking for CVMFS
[2025-11-25 00:13:05] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 00:13:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 00:13:05] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 00:13:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 00:13:07] 2.13.2.0 10847 33963 264916 153271 3 57 33149362 40960000 15093 16776704 0 34179516 99.694 27672576 42949 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-25 00:13:07] CVMFS is ok
[2025-11-25 00:13:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 00:13:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 00:13:07] Further information can be found at the LHC@home message board.
[2025-11-25 00:13:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 00:13:07] Checking for apptainer binary...
[2025-11-25 00:13:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 00:13:07] Running /usr/bin/apptainer --version
[2025-11-25 00:13:07] apptainer version 1.4.4-1.el9
[2025-11-25 00:13:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 00:13:09] c-210-35-4.aglt2.org
[2025-11-25 00:13:09] apptainer works
[2025-11-25 00:13:09] Set ATHENA_PROC_NUMBER=8
[2025-11-25 00:13:09] Set ATHENA_CORE_NUMBER=8
[2025-11-25 00:13:09] Starting ATLAS job with PandaID=6894052273
[2025-11-25 00:13:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 12:39:41]  *** The last 200 lines of the pilot log: ***
[2025-11-25 12:39:41] 2025-11-25 15:40:42,306 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-25 12:39:41] 2025-11-25 15:40:42,388 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2919.0191071428585
[2025-11-25 12:39:41] 2025-11-25 15:40:42,455 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6894052273/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 12:39:41] 2025-11-25 15:40:42,456 | INFO     | extracted standard info from prmon json
[2025-11-25 12:39:41] 2025-11-25 15:40:42,456 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 12:39:41] 2025-11-25 15:40:42,456 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 12:39:41] 2025-11-25 15:40:42,457 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-25 12:39:41] 2025-11-25 15:40:42,457 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-25 12:39:41] 2025-11-25 15:40:42,582 | INFO     | fitting pss+swap vs Time
[2025-11-25 12:39:41] 2025-11-25 15:40:42,583 | INFO     | sum of square deviations: 71769799474.92513
[2025-11-25 12:39:41] 2025-11-25 15:40:42,591 | INFO     | sum of deviations: 121711317093.51157
[2025-11-25 12:39:41] 2025-11-25 15:40:42,591 | INFO     | mean x: 1764066497.4136808
[2025-11-25 12:39:41] 2025-11-25 15:40:42,591 | INFO     | mean y: 2580153.9153094464
[2025-11-25 12:39:41] 2025-11-25 15:40:42,591 | INFO     | intersect: -2989024370.711667
[2025-11-25 12:39:41] 2025-11-25 15:40:42,592 | INFO     | chi2: 4.029383598803098
[2025-11-25 12:39:41] 2025-11-25 15:40:42,593 | INFO     | sum of square deviations: 70030860106.82109
[2025-11-25 12:39:41] 2025-11-25 15:40:42,600 | INFO     | sum of deviations: 160097164147.3118
[2025-11-25 12:39:41] 2025-11-25 15:40:42,600 | INFO     | mean x: 1764066344.9277503
[2025-11-25 12:39:41] 2025-11-25 15:40:42,600 | INFO     | mean y: 2583497.052545156
[2025-11-25 12:39:41] 2025-11-25 15:40:42,600 | INFO     | intersect: -4030238872.39795
[2025-11-25 12:39:41] 2025-11-25 15:40:42,601 | INFO     | chi2: 3.352366477514566
[2025-11-25 12:39:41] 2025-11-25 15:40:42,601 | INFO     | current chi2=3.352366477514566 (change=16.802002209212233 %)
[2025-11-25 12:39:41] 2025-11-25 15:40:42,601 | INFO     | right removable region: 608
[2025-11-25 12:39:41] 2025-11-25 15:40:42,602 | INFO     | sum of square deviations: 70030180563.9638
[2025-11-25 12:39:41] 2025-11-25 15:40:42,609 | INFO     | sum of deviations: -35839215163.98195
[2025-11-25 12:39:41] 2025-11-25 15:40:42,609 | INFO     | mean x: 1764066649.9293923
[2025-11-25 12:39:41] 2025-11-25 15:40:42,609 | INFO     | mean y: 2593947.5353037766
[2025-11-25 12:39:41] 2025-11-25 15:40:42,609 | INFO     | intersect: 905387053.6115937
[2025-11-25 12:39:41] 2025-11-25 15:40:42,610 | INFO     | chi2: 1.629155541252946
[2025-11-25 12:39:41] 2025-11-25 15:40:42,610 | INFO     | current chi2=1.629155541252946 (change=59.568120003841884 %)
[2025-11-25 12:39:41] 2025-11-25 15:40:42,611 | INFO     | sum of square deviations: 68318924673.08601
[2025-11-25 12:39:41] 2025-11-25 15:40:42,618 | INFO     | sum of deviations: -113386346632.5495
[2025-11-25 12:39:41] 2025-11-25 15:40:42,618 | INFO     | mean x: 1764066802.4437087
[2025-11-25 12:39:41] 2025-11-25 15:40:42,618 | INFO     | mean y: 2600850.263245033
[2025-11-25 12:39:41] 2025-11-25 15:40:42,618 | INFO     | intersect: 2930356093.806373
[2025-11-25 12:39:41] 2025-11-25 15:40:42,619 | INFO     | chi2: 1.0431515014140273
[2025-11-25 12:39:41] 2025-11-25 15:40:42,619 | INFO     | current chi2=1.0431515014140273 (change=35.96980306670021 %)
[2025-11-25 12:39:41] 2025-11-25 15:40:42,620 | INFO     | sum of square deviations: 66635836389.78288
[2025-11-25 12:39:41] 2025-11-25 15:40:42,627 | INFO     | sum of deviations: -131202860886.83315
[2025-11-25 12:39:41] 2025-11-25 15:40:42,627 | INFO     | mean x: 1764066954.9549248
[2025-11-25 12:39:41] 2025-11-25 15:40:42,627 | INFO     | mean y: 2602460.265442404
[2025-11-25 12:39:41] 2025-11-25 15:40:42,627 | INFO     | intersect: 3475968201.968628
[2025-11-25 12:39:41] 2025-11-25 15:40:42,628 | INFO     | chi2: 0.9969386424130644
[2025-11-25 12:39:41] 2025-11-25 15:40:42,628 | INFO     | current chi2=0.9969386424130644 (change=4.430119588412598 %)
[2025-11-25 12:39:41] 2025-11-25 15:40:42,628 | INFO     | left removable region: 30
[2025-11-25 12:39:41] 2025-11-25 15:40:42,629 | INFO     | sum of square deviations: 59869334348.493065
[2025-11-25 12:39:41] 2025-11-25 15:40:42,635 | INFO     | sum of deviations: -72568093378.39276
[2025-11-25 12:39:41] 2025-11-25 15:40:42,635 | INFO     | mean x: 1764067229.4965398
[2025-11-25 12:39:41] 2025-11-25 15:40:42,636 | INFO     | mean y: 2604221.053633218
[2025-11-25 12:39:41] 2025-11-25 15:40:42,636 | INFO     | intersect: 2140844053.3308012
[2025-11-25 12:39:41] 2025-11-25 15:40:42,636 | INFO     | chi2: 0.261698440772881
[2025-11-25 12:39:41] 2025-11-25 15:40:42,637 | INFO     | current memory leak: -1.21 B/s (using 578 data points, chi2=0.26)
[2025-11-25 12:39:41] 2025-11-25 15:40:42,637 | INFO     | could have reported an average CPU frequency of 2806 MHz (24 samples)
[2025-11-25 12:39:41] 2025-11-25 15:40:42,638 | INFO     | ..............................
[2025-11-25 12:39:41] 2025-11-25 15:40:42,638 | INFO     | . Timing measurements:
[2025-11-25 12:39:41] 2025-11-25 15:40:42,638 | INFO     | . get job = 0 s
[2025-11-25 12:39:41] 2025-11-25 15:40:42,638 | INFO     | . initial setup = 5 s
[2025-11-25 12:39:41] 2025-11-25 15:40:42,638 | INFO     | . payload setup = 43 s
[2025-11-25 12:39:41] 2025-11-25 15:40:42,638 | INFO     | . stage-in = 0 s
[2025-11-25 12:39:41] 2025-11-25 15:40:42,638 | INFO     | . payload execution = 37442 s
[2025-11-25 12:39:41] 2025-11-25 15:40:42,638 | INFO     | . stage-out = 4 s
[2025-11-25 12:39:41] 2025-11-25 15:40:42,638 | INFO     | . log creation = 0 s
[2025-11-25 12:39:41] 2025-11-25 15:40:42,638 | INFO     | ..............................
[2025-11-25 12:39:41] 2025-11-25 15:40:42,723 | INFO     | 
[2025-11-25 12:39:41] 2025-11-25 15:40:42,723 | INFO     | job summary report
[2025-11-25 12:39:41] 2025-11-25 15:40:42,723 | INFO     | --------------------------------------------------
[2025-11-25 12:39:41] 2025-11-25 15:40:42,723 | INFO     | PanDA job id: 6894052273
[2025-11-25 12:39:41] 2025-11-25 15:40:42,724 | INFO     | task id: 47523650
[2025-11-25 12:39:41] 2025-11-25 15:40:42,724 | INFO     | errors: (none)
[2025-11-25 12:39:41] 2025-11-25 15:40:42,724 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 12:39:41] 2025-11-25 15:40:42,724 | INFO     | pilot state: finished 
[2025-11-25 12:39:41] 2025-11-25 15:40:42,724 | INFO     | transexitcode: 0
[2025-11-25 12:39:41] 2025-11-25 15:40:42,724 | INFO     | exeerrorcode: 0
[2025-11-25 12:39:41] 2025-11-25 15:40:42,724 | INFO     | exeerrordiag: 
[2025-11-25 12:39:41] 2025-11-25 15:40:42,724 | INFO     | exitcode: 0
[2025-11-25 12:39:41] 2025-11-25 15:40:42,724 | INFO     | exitmsg: OK
[2025-11-25 12:39:41] 2025-11-25 15:40:42,724 | INFO     | cpuconsumptiontime: 109746 s
[2025-11-25 12:39:41] 2025-11-25 15:40:42,724 | INFO     | nevents: 400
[2025-11-25 12:39:41] 2025-11-25 15:40:42,724 | INFO     | neventsw: 0
[2025-11-25 12:39:41] 2025-11-25 15:40:42,724 | INFO     | pid: 939348
[2025-11-25 12:39:41] 2025-11-25 15:40:42,724 | INFO     | pgrp: 939348
[2025-11-25 12:39:41] 2025-11-25 15:40:42,724 | INFO     | corecount: 8
[2025-11-25 12:39:41] 2025-11-25 15:40:42,724 | INFO     | event service: False
[2025-11-25 12:39:41] 2025-11-25 15:40:42,725 | INFO     | sizes: {0: 2283131, 1: 2283816, 2: 2283844, 3: 2284043, 15: 2284043, 26: 2284071, 36: 2284489, 37: 2284517, 37488: 2326540, 37493: 2335543, 37494: 2335599, 37519: 
[2025-11-25 12:39:41] 2025-11-25 15:40:42,725 | INFO     | --------------------------------------------------
[2025-11-25 12:39:41] 2025-11-25 15:40:42,725 | INFO     | 
[2025-11-25 12:39:41] 2025-11-25 15:40:42,725 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-25 12:39:41] 2025-11-25 15:40:42,840 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 12:39:41] 2025-11-25 15:40:42,840 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 12:39:41] 2025-11-25 15:40:42,840 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 12:39:41] 2025-11-25 15:40:42,840 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 12:39:41] 2025-11-25 15:40:42,840 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 12:39:41] 2025-11-25 15:40:42,840 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 12:39:41] 2025-11-25 15:40:42,840 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 12:39:41] 2025-11-25 15:40:42,841 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 12:39:41] 2025-11-25 15:40:42,841 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 12:39:41] 2025-11-25 15:40:42,841 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 12:39:41] 2025-11-25 15:40:42,841 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 12:39:41] 2025-11-25 15:40:42,841 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 12:39:41] 2025-11-25 15:40:42,841 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 12:39:41] 2025-11-25 15:40:42,841 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 12:39:41] 2025-11-25 15:40:42,841 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 12:39:41] 2025-11-25 15:40:42,841 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 12:39:41] 2025-11-25 15:40:42,841 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 12:39:41] 2025-11-25 15:40:42,841 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 12:39:41] 2025-11-25 15:40:42,841 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 12:39:41] 2025-11-25 15:40:42,841 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 12:39:41] 2025-11-25 15:40:42,842 | INFO     | job 6894052273 has completed (purged errors)
[2025-11-25 12:39:41] 2025-11-25 15:40:42,842 | INFO     | overall cleanup function is called
[2025-11-25 12:39:41] 2025-11-25 15:40:43,881 | INFO     | --- collectZombieJob: --- 10, [939348]
[2025-11-25 12:39:41] 2025-11-25 15:40:43,881 | INFO     | zombie collector waiting for pid 939348
[2025-11-25 12:39:41] 2025-11-25 15:40:43,882 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 12:39:41] 2025-11-25 15:40:43,882 | INFO     | collected zombie processes
[2025-11-25 12:39:41] 2025-11-25 15:40:43,882 | INFO     | will attempt to kill all subprocesses of pid=939348
[2025-11-25 12:39:41] 2025-11-25 15:40:45,249 | INFO     | process IDs to be killed: [939348] (in reverse order)
[2025-11-25 12:39:41] 2025-11-25 15:40:45,388 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 12:39:41] 2025-11-25 15:40:45,389 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 12:39:41] 2025-11-25 15:40:45,403 | INFO     | did not find any defunct processes belonging to 939348
[2025-11-25 12:39:41] 2025-11-25 15:40:45,415 | INFO     | did not find any defunct processes belonging to 939348
[2025-11-25 12:39:41] 2025-11-25 15:40:45,417 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 12:39:41] 2025-11-25 15:40:45,418 | INFO     | ready for new job
[2025-11-25 12:39:41] 2025-11-25 15:40:45,418 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 12:39:41] 2025-11-25 15:40:45,424 | INFO     | ***************************************
[2025-11-25 12:39:41] 2025-11-25 15:40:45,424 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 12:39:41] 2025-11-25 15:40:45,424 | INFO     | ***************************************
[2025-11-25 12:39:41] 2025-11-25 15:40:45,425 | INFO     | 
[2025-11-25 12:39:41] 2025-11-25 15:40:45,429 | INFO     | architecture information:
[2025-11-25 12:39:41] 2025-11-25 15:40:45,437 | INFO     | executing command: cat /etc/os-release
[2025-11-25 12:39:41] 2025-11-25 15:40:45,499 | INFO     | cat /etc/os-release:
[2025-11-25 12:39:41] NAME="CentOS Linux"
[2025-11-25 12:39:41] VERSION="7 (Core)"
[2025-11-25 12:39:41] ID="centos"
[2025-11-25 12:39:41] ID_LIKE="rhel fedora"
[2025-11-25 12:39:41] VERSION_ID="7"
[2025-11-25 12:39:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 12:39:41] ANSI_COLOR="0;31"
[2025-11-25 12:39:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 12:39:41] HOME_URL="https://www.centos.org/"
[2025-11-25 12:39:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 12:39:41] 
[2025-11-25 12:39:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 12:39:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 12:39:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 12:39:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 12:39:41] 
[2025-11-25 12:39:41] 2025-11-25 15:40:45,499 | INFO     | ***************************************
[2025-11-25 12:39:41] 2025-11-25 15:40:46,002 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-25 12:39:41] 2025-11-25 15:40:46,062 | INFO     | sufficient remaining disk space (69767004160 B)
[2025-11-25 12:39:41] 2025-11-25 15:40:46,062 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 12:39:41] 2025-11-25 15:40:46,062 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 12:39:41] 2025-11-25 15:40:46,062 | INFO     | update_server=False
[2025-11-25 12:39:41] 2025-11-25 15:40:46,063 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 12:39:41] 2025-11-25 15:40:46,098 | INFO     | all job control threads have been joined
[2025-11-25 12:39:41] 2025-11-25 15:40:46,659 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 12:39:41] 2025-11-25 15:40:46,659 | INFO     | aborting loop
[2025-11-25 12:39:41] 2025-11-25 15:40:46,803 | INFO     | all data control threads have been joined
[2025-11-25 12:39:41] 2025-11-25 15:40:46,980 | INFO     | all payload control threads have been joined
[2025-11-25 12:39:41] 2025-11-25 15:40:47,068 | INFO     | [job] retrieve thread has finished
[2025-11-25 12:39:41] 2025-11-25 15:40:47,104 | INFO     | [job] control thread has finished
[2025-11-25 12:39:41] 2025-11-25 15:40:47,152 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 12:39:41] 2025-11-25 15:40:47,384 | INFO     | [payload] validate_post thread has finished
[2025-11-25 12:39:41] 2025-11-25 15:40:47,563 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 12:39:41] 2025-11-25 15:40:47,665 | INFO     | [job] job monitor thread has finished
[2025-11-25 12:39:41] 2025-11-25 15:40:47,690 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 12:39:41] 2025-11-25 15:40:47,746 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 12:39:41] 2025-11-25 15:40:47,809 | INFO     | [data] control thread has finished
[2025-11-25 12:39:41] 2025-11-25 15:40:47,986 | INFO     | [payload] control thread has finished
[2025-11-25 12:39:41] 2025-11-25 15:40:47,994 | INFO     | [job] validate thread has finished
[2025-11-25 12:39:41] 2025-11-25 15:40:48,046 | INFO     | [payload] failed_post thread has finished
[2025-11-25 12:39:41] 2025-11-25 15:40:48,325 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 12:39:41] 2025-11-25 15:40:48,396 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 12:39:41] 2025-11-25 15:40:48,479 | INFO     | [data] copytool_in thread has finished
[2025-11-25 12:39:41] 2025-11-25 15:40:48,752 | INFO     | [job] queue monitor thread has finished
[2025-11-25 12:39:41] 2025-11-25 15:40:49,569 | INFO     | [data] copytool_out thread has finished
[2025-11-25 12:39:41] 2025-11-25 15:40:51,161 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 12:39:41] 2025-11-25 15:40:56,843 | INFO     | job.realtimelogging is not enabled
[2025-11-25 12:39:41] 2025-11-25 15:40:57,849 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 12:39:41] 2025-11-25 15:41:15,537 | INFO     | PID=932606 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-25 12:39:41] 2025-11-25 15:41:15,537 | INFO     | .. there are 11 such processes running
[2025-11-25 12:39:41] 2025-11-25 15:41:15,537 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 12:39:41] 2025-11-25 15:41:15,537 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 12:39:41] 2025-11-25 15:41:15,537 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 12:39:41] 2025-11-25 15:41:26,322 | INFO     | [monitor] cgroup control has ended
[2025-11-25 12:39:41] 2025-11-25 15:41:26,746 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140233795180352)>', '<ExcThread(monitor, started 140233165240064)>']
[2025-11-25 12:39:41] 2025-11-25 15:41:27,638 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 12:39:41] 2025-11-25 15:41:27,638 | INFO     | [monitor] control thread has ended
[2025-11-25 12:39:41] 2025-11-25 15:41:31,772 | INFO     | all workflow threads have been joined
[2025-11-25 12:39:41] 2025-11-25 15:41:31,772 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 12:39:41] 2025-11-25 15:41:31,773 | INFO     | traces error code: 0
[2025-11-25 12:39:41] 2025-11-25 15:41:31,773 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 12:39:41] 2025-11-25 15:41:32,143 [wrapper] ==== pilot stdout END ====
[2025-11-25 12:39:41] 2025-11-25 15:41:32,161 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 12:39:41] 2025-11-25 15:41:32,200 [wrapper] pilotpid: 932606
[2025-11-25 12:39:41] 2025-11-25 15:41:32,225 [wrapper] Pilot exit status: 0
[2025-11-25 12:39:41] 2025-11-25 15:41:32,259 [wrapper] pandaids: 6894052273
[2025-11-25 12:39:41] 2025-11-25 15:41:32,313 [wrapper] cleanup supervisor_pilot 1961273 932607
[2025-11-25 12:39:41] 2025-11-25 15:41:32,316 [wrapper] Test setup, not cleaning
[2025-11-25 12:39:41] 2025-11-25 15:41:32,318 [wrapper] apfmon messages muted
[2025-11-25 12:39:41] 2025-11-25 15:41:32,321 [wrapper] ==== wrapper stdout END ====
[2025-11-25 12:39:41] 2025-11-25 15:41:32,323 [wrapper] ==== wrapper stderr END ====
[2025-11-25 12:39:41]  *** Error codes and diagnostics ***
[2025-11-25 12:39:41]     "exeErrorCode": 0,
[2025-11-25 12:39:41]     "exeErrorDiag": "",
[2025-11-25 12:39:41]     "pilotErrorCode": 0,
[2025-11-25 12:39:41]     "pilotErrorDiag": "",
[2025-11-25 12:39:41]  *** Listing of results directory ***
[2025-11-25 12:39:41] total 627896
[2025-11-25 12:39:41] -rw-r--r--. 1 boincer umatlas    576529 Nov 23 06:12 pilot3.tar.gz
[2025-11-25 12:39:41] -rw-r--r--. 1 boincer umatlas      5112 Nov 23 06:39 queuedata.json
[2025-11-25 12:39:41] -rwx------. 1 boincer umatlas     36292 Nov 23 06:41 runpilot2-wrapper.sh
[2025-11-25 12:39:41] -rw-r--r--. 1 boincer umatlas       100 Nov 25 00:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 12:39:41] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 00:13 run_atlas
[2025-11-25 12:39:41] -rw-r--r--. 1 boincer umatlas       105 Nov 25 00:13 job.xml
[2025-11-25 12:39:41] -rw-r--r--. 2 boincer umatlas 294329666 Nov 25 00:13 EVNT.47523648._000005.pool.root.1
[2025-11-25 12:39:41] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 00:13 start_atlas.sh
[2025-11-25 12:39:41] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 00:13 shared
[2025-11-25 12:39:41] -rw-r--r--. 2 boincer umatlas    589957 Nov 25 00:13 input.tar.gz
[2025-11-25 12:39:41] -rw-r--r--. 1 boincer umatlas         0 Nov 25 00:13 boinc_lockfile
[2025-11-25 12:39:41] -rw-r--r--. 1 boincer umatlas      2625 Nov 25 00:13 pandaJob.out
[2025-11-25 12:39:41] -rw-------. 1 boincer umatlas        57 Nov 25 00:13 setup.sh.local
[2025-11-25 12:39:41] -rw-------. 1 boincer umatlas    991801 Nov 25 00:14 agis_schedconf.cvmfs.json
[2025-11-25 12:39:41] drwx------. 5 boincer umatlas      4096 Nov 25 00:14 pilot3
[2025-11-25 12:39:41] -rw-------. 1 boincer umatlas 333410848 Nov 25 10:39 HITS.47523650._000121.pool.root.1
[2025-11-25 12:39:41] -rw-r--r--. 1 boincer umatlas       532 Nov 25 10:39 boinc_task_state.xml
[2025-11-25 12:39:41] -rw-------. 1 boincer umatlas      1042 Nov 25 10:40 memory_monitor_summary.json
[2025-11-25 12:39:41] -rw-------. 1 boincer umatlas   1516240 Nov 25 10:40 agis_ddmendpoints.agis.ALL.json
[2025-11-25 12:39:41] -rw-------. 1 boincer umatlas    778663 Nov 25 10:40 log.47523650._000121.job.log.tgz.1
[2025-11-25 12:39:41] -rw-------. 1 boincer umatlas        95 Nov 25 10:40 pilot_heartbeat.json
[2025-11-25 12:39:41] -rw-------. 1 boincer umatlas      7821 Nov 25 10:40 heartbeat.json
[2025-11-25 12:39:41] -rw-------. 1 boincer umatlas      4895 Nov 25 10:41 pilotlog.txt
[2025-11-25 12:39:41] -rw-------. 1 boincer umatlas   4876700 Nov 25 10:41 log.47523650._000121.job.log.1
[2025-11-25 12:39:41] -rw-------. 1 boincer umatlas       357 Nov 25 10:41 output.list
[2025-11-25 12:39:41] -rw-r--r--. 1 boincer umatlas       620 Nov 25 10:41 runtime_log
[2025-11-25 12:39:41] -rw-------. 1 boincer umatlas   5672960 Nov 25 10:41 result.tar.gz
[2025-11-25 12:39:41] -rw-r--r--. 1 boincer umatlas      9353 Nov 25 10:41 runtime_log.err
[2025-11-25 12:39:41] -rw-------. 1 boincer umatlas       661 Nov 25 10:41 f2fMDm0dNh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmDrKKDmhEKspm.diag
[2025-11-25 12:39:41] -rw-r--r--. 1 boincer umatlas      6844 Nov 25 12:39 init_data.xml
[2025-11-25 12:39:41] -rw-r--r--. 1 boincer umatlas      8192 Nov 25 12:39 boinc_mmap_file
[2025-11-25 12:39:41] -rw-r--r--. 1 boincer umatlas        29 Nov 25 12:39 wrapper_checkpoint.txt
[2025-11-25 12:39:41] -rw-r--r--. 1 boincer umatlas     21285 Nov 25 12:39 stderr.txt
[2025-11-25 12:39:41] HITS file was successfully produced:
[2025-11-25 12:39:41] -rw-------. 1 boincer umatlas 333410848 Nov 25 10:39 shared/HITS.pool.root.1
[2025-11-25 12:39:41]  *** Contents of shared directory: ***
[2025-11-25 12:39:41] total 619172
[2025-11-25 12:39:41] -rw-r--r--. 2 boincer umatlas 294329666 Nov 25 00:13 ATLAS.root_0
[2025-11-25 12:39:41] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 00:13 start_atlas.sh
[2025-11-25 12:39:41] -rw-r--r--. 2 boincer umatlas    589957 Nov 25 00:13 input.tar.gz
[2025-11-25 12:39:41] -rw-------. 1 boincer umatlas 333410848 Nov 25 10:39 HITS.pool.root.1
[2025-11-25 12:39:41] -rw-------. 1 boincer umatlas   5672960 Nov 25 10:41 result.tar.gz
12:39:43 (927403): run_atlas exited; CPU time 110669.894155
12:39:43 (927403): called boinc_finish(0)

</stderr_txt>
]]>

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