Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:21:44 (4142932): wrapper (7.7.26015): starting
23:21:44 (4142932): wrapper: running run_atlas (--nthreads 10)
[2025-11-24 23:21:44] Arguments: --nthreads 10
[2025-11-24 23:21:44] Threads: 10
[2025-11-24 23:21:44] Checking for CVMFS
[2025-11-24 23:21:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 23:21:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 23:21:45] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 23:21:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 23:21:46] 2.13.3.0 11393 28124 329832 153270 0 158 29519864 32935937 20646 16776704 0 86587932 99.371 137789423 40703 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-24 23:21:46] CVMFS is ok
[2025-11-24 23:21:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 23:21:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 23:21:46] Further information can be found at the LHC@home message board.
[2025-11-24 23:21:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 23:21:46] Checking for apptainer binary...
[2025-11-24 23:21:46] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 23:21:46] Running /usr/bin/apptainer --version
[2025-11-24 23:21:46] apptainer version 1.4.4-1.el9
[2025-11-24 23:22:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 23:22:07] c6-5-37-2.aglt2.org
[2025-11-24 23:22:07] apptainer works
[2025-11-24 23:22:07] Set ATHENA_PROC_NUMBER=10
[2025-11-24 23:22:07] Set ATHENA_CORE_NUMBER=10
[2025-11-24 23:22:07] Starting ATLAS job with PandaID=6895357017
[2025-11-24 23:22:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 19:29:32]  *** The last 200 lines of the pilot log: ***
[2025-11-25 19:29:32] 2025-11-26 00:28:58,160 | INFO     | monitor loop #4895: job 0:6895357017 is in state 'finished'
[2025-11-25 19:29:32] 2025-11-26 00:28:58,160 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 19:29:32] 2025-11-26 00:28:58,876 | INFO     | time since job start (72349s) is within the limit (172800.0s)
[2025-11-25 19:29:32] 2025-11-26 00:29:00,345 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-25 19:29:32] 2025-11-26 00:29:00,351 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 3218.3929821428574
[2025-11-25 19:29:32] 2025-11-26 00:29:00,360 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6895357017/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 19:29:32] 2025-11-26 00:29:00,360 | INFO     | extracted standard info from prmon json
[2025-11-25 19:29:32] 2025-11-26 00:29:00,360 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 19:29:32] 2025-11-26 00:29:00,360 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 19:29:32] 2025-11-26 00:29:00,375 | INFO     | fitting pss+swap vs Time
[2025-11-25 19:29:32] 2025-11-26 00:29:00,377 | INFO     | sum of square deviations: 514463978535.5805
[2025-11-25 19:29:32] 2025-11-26 00:29:00,398 | INFO     | sum of deviations: 5731116275407.922
[2025-11-25 19:29:32] 2025-11-26 00:29:00,399 | INFO     | mean x: 1764080810.0346284
[2025-11-25 19:29:32] 2025-11-26 00:29:00,399 | INFO     | mean y: 3151558.465371622
[2025-11-25 19:29:32] 2025-11-26 00:29:00,399 | INFO     | intersect: -19648665990.16603
[2025-11-25 19:29:32] 2025-11-26 00:29:00,400 | INFO     | chi2: 6.13837547912351
[2025-11-25 19:29:32] 2025-11-26 00:29:00,401 | INFO     | sum of square deviations: 507973092516.76996
[2025-11-25 19:29:32] 2025-11-26 00:29:00,422 | INFO     | sum of deviations: 6085776398872.189
[2025-11-25 19:29:32] 2025-11-26 00:29:00,423 | INFO     | mean x: 1764080657.5581
[2025-11-25 19:29:32] 2025-11-26 00:29:00,423 | INFO     | mean y: 3159886.048346056
[2025-11-25 19:29:32] 2025-11-26 00:29:00,423 | INFO     | intersect: -21131424976.08112
[2025-11-25 19:29:32] 2025-11-26 00:29:00,424 | INFO     | chi2: 3.805972628547036
[2025-11-25 19:29:32] 2025-11-26 00:29:00,424 | INFO     | current chi2=3.805972628547036 (change=37.99707037324335 %)
[2025-11-25 19:29:32] 2025-11-26 00:29:00,425 | INFO     | sum of square deviations: 501536901160.47327
[2025-11-25 19:29:32] 2025-11-26 00:29:00,446 | INFO     | sum of deviations: 6091223280404.942
[2025-11-25 19:29:32] 2025-11-26 00:29:00,446 | INFO     | mean x: 1764080505.080068
[2025-11-25 19:29:32] 2025-11-26 00:29:00,446 | INFO     | mean y: 3160011.2879045997
[2025-11-25 19:29:32] 2025-11-26 00:29:00,447 | INFO     | intersect: -21421800377.84623
[2025-11-25 19:29:32] 2025-11-26 00:29:00,448 | INFO     | chi2: 3.6667807274360786
[2025-11-25 19:29:32] 2025-11-26 00:29:00,448 | INFO     | current chi2=3.6667807274360786 (change=3.6571965879874186 %)
[2025-11-25 19:29:32] 2025-11-26 00:29:00,448 | INFO     | right removable region: 1173
[2025-11-25 19:29:32] 2025-11-26 00:29:00,449 | INFO     | sum of square deviations: 507969095186.77014
[2025-11-25 19:29:32] 2025-11-26 00:29:00,470 | INFO     | sum of deviations: 5267348329518.43
[2025-11-25 19:29:32] 2025-11-26 00:29:00,470 | INFO     | mean x: 1764080962.5581
[2025-11-25 19:29:32] 2025-11-26 00:29:00,470 | INFO     | mean y: 3162446.409669211
[2025-11-25 19:29:32] 2025-11-26 00:29:00,470 | INFO     | intersect: -18289345895.75469
[2025-11-25 19:29:32] 2025-11-26 00:29:00,471 | INFO     | chi2: 2.926670416369417
[2025-11-25 19:29:32] 2025-11-26 00:29:00,472 | INFO     | current chi2=2.926670416369417 (change=52.32174332894813 %)
[2025-11-25 19:29:32] 2025-11-26 00:29:00,473 | INFO     | sum of square deviations: 501530703234.46185
[2025-11-25 19:29:32] 2025-11-26 00:29:00,494 | INFO     | sum of deviations: 5127437260879.027
[2025-11-25 19:29:32] 2025-11-26 00:29:00,494 | INFO     | mean x: 1764081115.0621805
[2025-11-25 19:29:32] 2025-11-26 00:29:00,494 | INFO     | mean y: 3165756.7257240205
[2025-11-25 19:29:32] 2025-11-26 00:29:00,494 | INFO     | intersect: -18032051593.375923
[2025-11-25 19:29:32] 2025-11-26 00:29:00,495 | INFO     | chi2: 2.6857193564271595
[2025-11-25 19:29:32] 2025-11-26 00:29:00,496 | INFO     | current chi2=2.6857193564271595 (change=8.232941386039672 %)
[2025-11-25 19:29:32] 2025-11-26 00:29:00,496 | INFO     | left removable region: 20
[2025-11-25 19:29:32] 2025-11-26 00:29:00,497 | INFO     | sum of square deviations: 475091697237.7593
[2025-11-25 19:29:32] 2025-11-26 00:29:00,517 | INFO     | sum of deviations: 5320410861828.112
[2025-11-25 19:29:32] 2025-11-26 00:29:00,517 | INFO     | mean x: 1764081084.5750217
[2025-11-25 19:29:32] 2025-11-26 00:29:00,517 | INFO     | mean y: 3177976.420641804
[2025-11-25 19:29:32] 2025-11-26 00:29:00,517 | INFO     | intersect: -19752242331.043556
[2025-11-25 19:29:32] 2025-11-26 00:29:00,519 | INFO     | chi2: 0.18794008024974512
[2025-11-25 19:29:32] 2025-11-26 00:29:00,519 | INFO     | current memory leak: 11.20 B/s (using 1153 data points, chi2=0.19)
[2025-11-25 19:29:32] 2025-11-26 00:29:00,520 | INFO     | could have reported an average CPU frequency of 2863 MHz (43 samples)
[2025-11-25 19:29:32] 2025-11-26 00:29:00,520 | INFO     | ..............................
[2025-11-25 19:29:32] 2025-11-26 00:29:00,520 | INFO     | . Timing measurements:
[2025-11-25 19:29:32] 2025-11-26 00:29:00,520 | INFO     | . get job = 0 s
[2025-11-25 19:29:32] 2025-11-26 00:29:00,520 | INFO     | . initial setup = 3 s
[2025-11-25 19:29:32] 2025-11-26 00:29:00,520 | INFO     | . payload setup = 39 s
[2025-11-25 19:29:32] 2025-11-26 00:29:00,520 | INFO     | . stage-in = 0 s
[2025-11-25 19:29:32] 2025-11-26 00:29:00,520 | INFO     | . payload execution = 72227 s
[2025-11-25 19:29:32] 2025-11-26 00:29:00,520 | INFO     | . stage-out = 3 s
[2025-11-25 19:29:32] 2025-11-26 00:29:00,521 | INFO     | . log creation = 0 s
[2025-11-25 19:29:32] 2025-11-26 00:29:00,521 | INFO     | ..............................
[2025-11-25 19:29:32] 2025-11-26 00:29:00,595 | INFO     | 
[2025-11-25 19:29:32] 2025-11-26 00:29:00,595 | INFO     | job summary report
[2025-11-25 19:29:32] 2025-11-26 00:29:00,595 | INFO     | --------------------------------------------------
[2025-11-25 19:29:32] 2025-11-26 00:29:00,595 | INFO     | PanDA job id: 6895357017
[2025-11-25 19:29:32] 2025-11-26 00:29:00,595 | INFO     | task id: 47556137
[2025-11-25 19:29:32] 2025-11-26 00:29:00,595 | INFO     | errors: (none)
[2025-11-25 19:29:32] 2025-11-26 00:29:00,596 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 19:29:32] 2025-11-26 00:29:00,596 | INFO     | pilot state: finished 
[2025-11-25 19:29:32] 2025-11-26 00:29:00,596 | INFO     | transexitcode: 0
[2025-11-25 19:29:32] 2025-11-26 00:29:00,596 | INFO     | exeerrorcode: 0
[2025-11-25 19:29:32] 2025-11-26 00:29:00,596 | INFO     | exeerrordiag: 
[2025-11-25 19:29:32] 2025-11-26 00:29:00,596 | INFO     | exitcode: 0
[2025-11-25 19:29:32] 2025-11-26 00:29:00,596 | INFO     | exitmsg: OK
[2025-11-25 19:29:32] 2025-11-26 00:29:00,596 | INFO     | cpuconsumptiontime: 257903 s
[2025-11-25 19:29:32] 2025-11-26 00:29:00,596 | INFO     | nevents: 1000
[2025-11-25 19:29:32] 2025-11-26 00:29:00,596 | INFO     | neventsw: 0
[2025-11-25 19:29:32] 2025-11-26 00:29:00,596 | INFO     | pid: 4160110
[2025-11-25 19:29:32] 2025-11-26 00:29:00,596 | INFO     | pgrp: 4160110
[2025-11-25 19:29:32] 2025-11-26 00:29:00,596 | INFO     | corecount: 10
[2025-11-25 19:29:32] 2025-11-26 00:29:00,597 | INFO     | event service: False
[2025-11-25 19:29:32] 2025-11-26 00:29:00,597 | INFO     | sizes: {0: 2283481, 1: 2284166, 2: 2284194, 3: 2284365, 14: 2284393, 24: 2284421, 35: 2284577, 38: 2284867, 46: 2284895, 72270: 2344035, 72274: 2353370, 72278: 235
[2025-11-25 19:29:32] 2025-11-26 00:29:00,597 | INFO     | --------------------------------------------------
[2025-11-25 19:29:32] 2025-11-26 00:29:00,597 | INFO     | 
[2025-11-25 19:29:32] 2025-11-26 00:29:00,597 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-25 19:29:32] 2025-11-26 00:29:00,695 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 19:29:32] 2025-11-26 00:29:00,696 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 19:29:32] 2025-11-26 00:29:00,696 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 19:29:32] 2025-11-26 00:29:00,696 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 19:29:32] 2025-11-26 00:29:00,696 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 19:29:32] 2025-11-26 00:29:00,696 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 19:29:32] 2025-11-26 00:29:00,696 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 19:29:32] 2025-11-26 00:29:00,696 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 19:29:32] 2025-11-26 00:29:00,696 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 19:29:32] 2025-11-26 00:29:00,696 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 19:29:32] 2025-11-26 00:29:00,696 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 19:29:32] 2025-11-26 00:29:00,696 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 19:29:32] 2025-11-26 00:29:00,696 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 19:29:32] 2025-11-26 00:29:00,696 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 19:29:32] 2025-11-26 00:29:00,697 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 19:29:32] 2025-11-26 00:29:00,697 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 19:29:32] 2025-11-26 00:29:00,697 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 19:29:32] 2025-11-26 00:29:00,697 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 19:29:32] 2025-11-26 00:29:00,697 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 19:29:32] 2025-11-26 00:29:00,697 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 19:29:32] 2025-11-26 00:29:00,697 | INFO     | job 6895357017 has completed (purged errors)
[2025-11-25 19:29:32] 2025-11-26 00:29:00,697 | INFO     | overall cleanup function is called
[2025-11-25 19:29:32] 2025-11-26 00:29:01,712 | INFO     | --- collectZombieJob: --- 10, [4160110]
[2025-11-25 19:29:32] 2025-11-26 00:29:01,713 | INFO     | zombie collector waiting for pid 4160110
[2025-11-25 19:29:32] 2025-11-26 00:29:01,713 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 19:29:32] 2025-11-26 00:29:01,713 | INFO     | collected zombie processes
[2025-11-25 19:29:32] 2025-11-26 00:29:01,713 | INFO     | will attempt to kill all subprocesses of pid=4160110
[2025-11-25 19:29:32] 2025-11-26 00:29:01,900 | INFO     | process IDs to be killed: [4160110] (in reverse order)
[2025-11-25 19:29:32] 2025-11-26 00:29:01,978 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 19:29:32] 2025-11-26 00:29:01,979 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 19:29:32] 2025-11-26 00:29:01,986 | INFO     | did not find any defunct processes belonging to 4160110
[2025-11-25 19:29:32] 2025-11-26 00:29:01,994 | INFO     | did not find any defunct processes belonging to 4160110
[2025-11-25 19:29:32] 2025-11-26 00:29:01,995 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 19:29:32] 2025-11-26 00:29:01,995 | INFO     | ready for new job
[2025-11-25 19:29:32] 2025-11-26 00:29:01,995 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 19:29:32] 2025-11-26 00:29:01,999 | INFO     | ***************************************
[2025-11-25 19:29:32] 2025-11-26 00:29:01,999 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 19:29:32] 2025-11-26 00:29:01,999 | INFO     | ***************************************
[2025-11-25 19:29:32] 2025-11-26 00:29:01,999 | INFO     | 
[2025-11-25 19:29:32] 2025-11-26 00:29:02,001 | INFO     | architecture information:
[2025-11-25 19:29:32] 2025-11-26 00:29:02,001 | INFO     | executing command: cat /etc/os-release
[2025-11-25 19:29:32] 2025-11-26 00:29:02,010 | INFO     | cat /etc/os-release:
[2025-11-25 19:29:32] NAME="CentOS Linux"
[2025-11-25 19:29:32] VERSION="7 (Core)"
[2025-11-25 19:29:32] ID="centos"
[2025-11-25 19:29:32] ID_LIKE="rhel fedora"
[2025-11-25 19:29:32] VERSION_ID="7"
[2025-11-25 19:29:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 19:29:32] ANSI_COLOR="0;31"
[2025-11-25 19:29:32] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 19:29:32] HOME_URL="https://www.centos.org/"
[2025-11-25 19:29:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 19:29:32] 
[2025-11-25 19:29:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 19:29:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 19:29:32] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 19:29:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 19:29:32] 
[2025-11-25 19:29:32] 2025-11-26 00:29:02,011 | INFO     | ***************************************
[2025-11-25 19:29:32] 2025-11-26 00:29:02,513 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-25 19:29:32] 2025-11-26 00:29:02,523 | INFO     | sufficient remaining disk space (72130494464 B)
[2025-11-25 19:29:32] 2025-11-26 00:29:02,523 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 19:29:32] 2025-11-26 00:29:02,524 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 19:29:32] 2025-11-26 00:29:02,524 | INFO     | update_server=False
[2025-11-25 19:29:32] 2025-11-26 00:29:02,524 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 19:29:32] 2025-11-26 00:29:02,524 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 19:29:32] 2025-11-26 00:29:02,524 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 19:29:32] 2025-11-26 00:29:02,524 | INFO     | aborting loop
[2025-11-25 19:29:32] 2025-11-26 00:29:02,577 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 19:29:32] 2025-11-26 00:29:03,419 | INFO     | all payload control threads have been joined
[2025-11-25 19:29:32] 2025-11-26 00:29:03,505 | INFO     | all data control threads have been joined
[2025-11-25 19:29:32] 2025-11-26 00:29:03,529 | INFO     | [job] retrieve thread has finished
[2025-11-25 19:29:32] 2025-11-26 00:29:03,530 | INFO     | [job] job monitor thread has finished
[2025-11-25 19:29:32] 2025-11-26 00:29:03,530 | INFO     | [job] queue monitor thread has finished
[2025-11-25 19:29:32] 2025-11-26 00:29:03,588 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 19:29:32] 2025-11-26 00:29:03,665 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 19:29:32] 2025-11-26 00:29:03,682 | INFO     | [payload] failed_post thread has finished
[2025-11-25 19:29:32] 2025-11-26 00:29:03,698 | INFO     | all job control threads have been joined
[2025-11-25 19:29:32] 2025-11-26 00:29:03,796 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 19:29:32] 2025-11-26 00:29:03,906 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 19:29:32] 2025-11-26 00:29:03,930 | INFO     | [data] copytool_in thread has finished
[2025-11-25 19:29:32] 2025-11-26 00:29:04,050 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 19:29:32] 2025-11-26 00:29:04,361 | INFO     | [payload] validate_post thread has finished
[2025-11-25 19:29:32] 2025-11-26 00:29:04,424 | INFO     | [payload] control thread has finished
[2025-11-25 19:29:32] 2025-11-26 00:29:04,511 | INFO     | [data] control thread has finished
[2025-11-25 19:29:32] 2025-11-26 00:29:04,600 | INFO     | [job] validate thread has finished
[2025-11-25 19:29:32] 2025-11-26 00:29:04,702 | INFO     | [job] control thread has finished
[2025-11-25 19:29:32] 2025-11-26 00:29:05,670 | INFO     | [data] copytool_out thread has finished
[2025-11-25 19:29:32] 2025-11-26 00:29:06,583 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 19:29:32] 2025-11-26 00:29:14,117 | INFO     | [monitor] cgroup control has ended
[2025-11-25 19:29:32] 2025-11-26 00:29:14,222 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140663780398912)>', '<ExcThread(monitor, started 140662922012416)>']
[2025-11-25 19:29:32] 2025-11-26 00:29:19,246 | INFO     | all workflow threads have been joined
[2025-11-25 19:29:32] 2025-11-26 00:29:19,247 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 19:29:32] 2025-11-26 00:29:19,247 | INFO     | traces error code: 0
[2025-11-25 19:29:32] 2025-11-26 00:29:19,247 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 19:29:32] 2025-11-26 00:29:32,321 | INFO     | PID=4147567 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-25 19:29:32] 2025-11-26 00:29:32,322 | INFO     | .. there are 23 such processes running
[2025-11-25 19:29:32] 2025-11-26 00:29:32,322 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 19:29:32] 2025-11-26 00:29:32,322 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 19:29:32] 2025-11-26 00:29:32,322 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 19:29:32] 2025-11-26 00:29:32,322 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 19:29:32] 2025-11-26 00:29:32,322 | INFO     | [monitor] control thread has ended
[2025-11-25 19:29:32] 2025-11-26 00:29:32,470 [wrapper] ==== pilot stdout END ====
[2025-11-25 19:29:32] 2025-11-26 00:29:32,473 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 19:29:32] 2025-11-26 00:29:32,476 [wrapper] pilotpid: 4147567
[2025-11-25 19:29:32] 2025-11-26 00:29:32,478 [wrapper] Pilot exit status: 0
[2025-11-25 19:29:32] 2025-11-26 00:29:32,489 [wrapper] pandaids: 6895357017
[2025-11-25 19:29:32] 2025-11-26 00:29:32,546 [wrapper] cleanup supervisor_pilot 2895182 4147568
[2025-11-25 19:29:32] 2025-11-26 00:29:32,550 [wrapper] Test setup, not cleaning
[2025-11-25 19:29:32] 2025-11-26 00:29:32,553 [wrapper] apfmon messages muted
[2025-11-25 19:29:32] 2025-11-26 00:29:32,556 [wrapper] ==== wrapper stdout END ====
[2025-11-25 19:29:32] 2025-11-26 00:29:32,560 [wrapper] ==== wrapper stderr END ====
[2025-11-25 19:29:32]  *** Error codes and diagnostics ***
[2025-11-25 19:29:32]     "exeErrorCode": 0,
[2025-11-25 19:29:32]     "exeErrorDiag": "",
[2025-11-25 19:29:32]     "pilotErrorCode": 0,
[2025-11-25 19:29:32]     "pilotErrorDiag": "",
[2025-11-25 19:29:32]  *** Listing of results directory ***
[2025-11-25 19:29:32] total 1329560
[2025-11-25 19:29:32] -rw-r--r--. 1 boincer umatlas    576529 Nov 23 06:44 pilot3.tar.gz
[2025-11-25 19:29:32] -rw-r--r--. 1 boincer umatlas      5112 Nov 23 06:56 queuedata.json
[2025-11-25 19:29:32] -rwx------. 1 boincer umatlas     36292 Nov 23 06:56 runpilot2-wrapper.sh
[2025-11-25 19:29:32] -rw-r--r--. 1 boincer umatlas       100 Nov 24 23:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 19:29:32] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 24 23:21 run_atlas
[2025-11-25 19:29:32] -rw-r--r--. 1 boincer umatlas       105 Nov 24 23:21 job.xml
[2025-11-25 19:29:32] -rw-r--r--. 2 boincer umatlas 409355451 Nov 24 23:21 EVNT.47483658._000717.pool.root.1
[2025-11-25 19:29:32] -rw-r--r--. 2 boincer umatlas    590098 Nov 24 23:21 input.tar.gz
[2025-11-25 19:29:32] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 23:21 start_atlas.sh
[2025-11-25 19:29:32] drwxrwx--x. 2 boincer umatlas      4096 Nov 24 23:21 shared
[2025-11-25 19:29:32] -rw-r--r--. 1 boincer umatlas         0 Nov 24 23:21 boinc_lockfile
[2025-11-25 19:29:32] -rw-r--r--. 1 boincer umatlas      2785 Nov 24 23:22 pandaJob.out
[2025-11-25 19:29:32] -rw-------. 1 boincer umatlas        57 Nov 24 23:22 setup.sh.local
[2025-11-25 19:29:32] -rw-------. 1 boincer umatlas    991801 Nov 24 23:23 agis_schedconf.cvmfs.json
[2025-11-25 19:29:32] drwx------. 5 boincer umatlas      4096 Nov 24 23:23 pilot3
[2025-11-25 19:29:32] -rw-r--r--. 1 boincer umatlas       533 Nov 25 19:20 boinc_task_state.xml
[2025-11-25 19:29:32] -rw-------. 1 boincer umatlas 923624203 Nov 25 19:28 HITS.47556137._007122.pool.root.1
[2025-11-25 19:29:32] -rw-------. 1 boincer umatlas        95 Nov 25 19:28 pilot_heartbeat.json
[2025-11-25 19:29:32] -rw-------. 1 boincer umatlas      1058 Nov 25 19:28 memory_monitor_summary.json
[2025-11-25 19:29:32] -rw-------. 1 boincer umatlas   1516240 Nov 25 19:28 agis_ddmendpoints.agis.ALL.json
[2025-11-25 19:29:32] -rw-------. 1 boincer umatlas   2532117 Nov 25 19:28 log.47556137._007122.job.log.tgz.1
[2025-11-25 19:29:32] -rw-------. 1 boincer umatlas      8632 Nov 25 19:29 heartbeat.json
[2025-11-25 19:29:32] -rw-r--r--. 1 boincer umatlas      6842 Nov 25 19:29 init_data.xml
[2025-11-25 19:29:32] -rw-r--r--. 1 boincer umatlas      8192 Nov 25 19:29 boinc_mmap_file
[2025-11-25 19:29:32] -rw-r--r--. 1 boincer umatlas        29 Nov 25 19:29 wrapper_checkpoint.txt
[2025-11-25 19:29:32] -rw-------. 1 boincer umatlas       823 Nov 25 19:29 pilotlog.txt
[2025-11-25 19:29:32] -rw-------. 1 boincer umatlas   9752297 Nov 25 19:29 log.47556137._007122.job.log.1
[2025-11-25 19:29:32] -rw-------. 1 boincer umatlas       353 Nov 25 19:29 output.list
[2025-11-25 19:29:32] -rw-r--r--. 1 boincer umatlas       620 Nov 25 19:29 runtime_log
[2025-11-25 19:29:32] -rw-------. 1 boincer umatlas  12308480 Nov 25 19:29 result.tar.gz
[2025-11-25 19:29:32] -rw-------. 1 boincer umatlas       661 Nov 25 19:29 EaqMDmzsNh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmorKKDmwluRJo.diag
[2025-11-25 19:29:32] -rw-r--r--. 1 boincer umatlas      9350 Nov 25 19:29 runtime_log.err
[2025-11-25 19:29:32] -rw-r--r--. 1 boincer umatlas     21386 Nov 25 19:29 stderr.txt
[2025-11-25 19:29:32] HITS file was successfully produced:
[2025-11-25 19:29:32] -rw-------. 1 boincer umatlas 923624203 Nov 25 19:28 shared/HITS.pool.root.1
[2025-11-25 19:29:32]  *** Contents of shared directory: ***
[2025-11-25 19:29:32] total 1314364
[2025-11-25 19:29:32] -rw-r--r--. 2 boincer umatlas 409355451 Nov 24 23:21 ATLAS.root_0
[2025-11-25 19:29:32] -rw-r--r--. 2 boincer umatlas    590098 Nov 24 23:21 input.tar.gz
[2025-11-25 19:29:32] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 23:21 start_atlas.sh
[2025-11-25 19:29:32] -rw-------. 1 boincer umatlas 923624203 Nov 25 19:28 HITS.pool.root.1
[2025-11-25 19:29:32] -rw-------. 1 boincer umatlas  12308480 Nov 25 19:29 result.tar.gz
19:29:34 (4142932): run_atlas exited; CPU time 258569.403712
19:29:34 (4142932): called boinc_finish(0)

</stderr_txt>
]]>

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