Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:20:09 (1476874): wrapper (7.7.26015): starting
00:20:09 (1476874): wrapper: running run_atlas (--nthreads 9)
[2025-11-24 00:20:09] Arguments: --nthreads 9
[2025-11-24 00:20:09] Threads: 9
[2025-11-24 00:20:09] Checking for CVMFS
[2025-11-24 00:20:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 00:20:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 00:20:11] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 00:20:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 00:20:14] 2.13.3.0 12130 25045 341144 153235 2 66 28626737 40960000 16944 16776704 0 86132363 99.665 73507838 36524 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-24 00:20:14] CVMFS is ok
[2025-11-24 00:20:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 00:20:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 00:20:14] Further information can be found at the LHC@home message board.
[2025-11-24 00:20:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 00:20:14] Checking for apptainer binary...
[2025-11-24 00:20:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 00:20:14] Running /usr/bin/apptainer --version
[2025-11-24 00:20:14] apptainer version 1.4.4-1.el9
[2025-11-24 00:20:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 00:20:16] c6-5-7-4.aglt2.org
[2025-11-24 00:20:16] apptainer works
[2025-11-24 00:20:16] Set ATHENA_PROC_NUMBER=9
[2025-11-24 00:20:16] Set ATHENA_CORE_NUMBER=9
[2025-11-24 00:20:16] Starting ATLAS job with PandaID=6895351153
[2025-11-24 00:20:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 23:54:55]  *** The last 200 lines of the pilot log: ***
[2025-11-24 23:54:55] 2025-11-25 04:54:20,813 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 23:54:55] 2025-11-25 04:54:20,813 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 23:54:55] 2025-11-25 04:54:20,838 | INFO     | fitting pss+swap vs Time
[2025-11-24 23:54:55] 2025-11-25 04:54:20,840 | INFO     | sum of square deviations: 825462823158.7827
[2025-11-24 23:54:55] 2025-11-25 04:54:20,877 | INFO     | sum of deviations: 5569209022224.432
[2025-11-24 23:54:55] 2025-11-25 04:54:20,877 | INFO     | mean x: 1764004180.0858586
[2025-11-24 23:54:55] 2025-11-25 04:54:20,877 | INFO     | mean y: 3067635.046897547
[2025-11-24 23:54:55] 2025-11-25 04:54:20,877 | INFO     | intersect: -11898265434.54193
[2025-11-24 23:54:55] 2025-11-25 04:54:20,879 | INFO     | chi2: 11.514662375118679
[2025-11-24 23:54:55] 2025-11-25 04:54:20,889 | INFO     | sum of square deviations: 816563615596.3634
[2025-11-24 23:54:55] 2025-11-25 04:54:20,927 | INFO     | sum of deviations: 6050132723104.974
[2025-11-24 23:54:55] 2025-11-25 04:54:20,927 | INFO     | mean x: 1764004027.6169443
[2025-11-24 23:54:55] 2025-11-25 04:54:20,927 | INFO     | mean y: 3075871.8979000724
[2025-11-24 23:54:55] 2025-11-25 04:54:20,927 | INFO     | intersect: -13066889881.327333
[2025-11-24 23:54:55] 2025-11-25 04:54:20,929 | INFO     | chi2: 8.459958355195088
[2025-11-24 23:54:55] 2025-11-25 04:54:20,929 | INFO     | current chi2=8.459958355195088 (change=26.52881969448198 %)
[2025-11-24 23:54:55] 2025-11-25 04:54:20,930 | INFO     | sum of square deviations: 807728641793.7557
[2025-11-24 23:54:55] 2025-11-25 04:54:20,960 | INFO     | sum of deviations: 6251072594856.707
[2025-11-24 23:54:55] 2025-11-25 04:54:20,960 | INFO     | mean x: 1764003875.1482558
[2025-11-24 23:54:55] 2025-11-25 04:54:20,960 | INFO     | mean y: 3079336.771075581
[2025-11-24 23:54:55] 2025-11-25 04:54:20,960 | INFO     | intersect: -13648679076.39151
[2025-11-24 23:54:55] 2025-11-25 04:54:20,961 | INFO     | chi2: 7.695898017758925
[2025-11-24 23:54:55] 2025-11-25 04:54:20,962 | INFO     | current chi2=7.695898017758925 (change=9.031490526983141 %)
[2025-11-24 23:54:55] 2025-11-25 04:54:20,962 | INFO     | right removable region: 1375
[2025-11-24 23:54:55] 2025-11-25 04:54:20,963 | INFO     | sum of square deviations: 816556440914.5968
[2025-11-24 23:54:55] 2025-11-25 04:54:20,991 | INFO     | sum of deviations: 4953540374915.668
[2025-11-24 23:54:55] 2025-11-25 04:54:20,991 | INFO     | mean x: 1764004332.6162202
[2025-11-24 23:54:55] 2025-11-25 04:54:20,992 | INFO     | mean y: 3078178.0861694426
[2025-11-24 23:54:55] 2025-11-25 04:54:20,992 | INFO     | intersect: -10698039644.649275
[2025-11-24 23:54:55] 2025-11-25 04:54:20,993 | INFO     | chi2: 6.995167346251762
[2025-11-24 23:54:55] 2025-11-25 04:54:20,993 | INFO     | current chi2=6.995167346251762 (change=39.249913559192265 %)
[2025-11-24 23:54:55] 2025-11-25 04:54:20,995 | INFO     | sum of square deviations: 807714208417.0531
[2025-11-24 23:54:55] 2025-11-25 04:54:21,024 | INFO     | sum of deviations: 4488992967347.435
[2025-11-24 23:54:55] 2025-11-25 04:54:21,024 | INFO     | mean x: 1764004485.1475291
[2025-11-24 23:54:55] 2025-11-25 04:54:21,024 | INFO     | mean y: 3086189.6875
[2025-11-24 23:54:55] 2025-11-25 04:54:21,024 | INFO     | intersect: -9800633548.900927
[2025-11-24 23:54:55] 2025-11-25 04:54:21,025 | INFO     | chi2: 4.551253514793049
[2025-11-24 23:54:55] 2025-11-25 04:54:21,026 | INFO     | current chi2=4.551253514793049 (change=34.937174630543204 %)
[2025-11-24 23:54:55] 2025-11-25 04:54:21,027 | INFO     | sum of square deviations: 798938828666.1229
[2025-11-24 23:54:55] 2025-11-25 04:54:21,054 | INFO     | sum of deviations: 4326076666020.378
[2025-11-24 23:54:55] 2025-11-25 04:54:21,055 | INFO     | mean x: 1764004637.654267
[2025-11-24 23:54:55] 2025-11-25 04:54:21,055 | INFO     | mean y: 3089018.492341357
[2025-11-24 23:54:55] 2025-11-25 04:54:21,055 | INFO     | intersect: -9548605088.613008
[2025-11-24 23:54:55] 2025-11-25 04:54:21,056 | INFO     | chi2: 4.271671214571736
[2025-11-24 23:54:55] 2025-11-25 04:54:21,056 | INFO     | current chi2=4.271671214571736 (change=6.142973563493663 %)
[2025-11-24 23:54:55] 2025-11-25 04:54:21,056 | INFO     | left removable region: 30
[2025-11-24 23:54:55] 2025-11-25 04:54:21,058 | INFO     | sum of square deviations: 754339676323.9602
[2025-11-24 23:54:55] 2025-11-25 04:54:21,085 | INFO     | sum of deviations: 4772874570178.853
[2025-11-24 23:54:55] 2025-11-25 04:54:21,085 | INFO     | mean x: 1764004759.7412639
[2025-11-24 23:54:55] 2025-11-25 04:54:21,085 | INFO     | mean y: 3105490.988104089
[2025-11-24 23:54:55] 2025-11-25 04:54:21,085 | INFO     | intersect: -11158144173.715645
[2025-11-24 23:54:55] 2025-11-25 04:54:21,086 | INFO     | chi2: 0.34042828556480603
[2025-11-24 23:54:55] 2025-11-25 04:54:21,087 | INFO     | current memory leak: 6.33 B/s (using 1345 data points, chi2=0.34)
[2025-11-24 23:54:55] 2025-11-25 04:54:21,088 | INFO     | could have reported an average CPU frequency of 2783 MHz (49 samples)
[2025-11-24 23:54:55] 2025-11-25 04:54:21,088 | INFO     | ..............................
[2025-11-24 23:54:55] 2025-11-25 04:54:21,088 | INFO     | . Timing measurements:
[2025-11-24 23:54:55] 2025-11-25 04:54:21,088 | INFO     | . get job = 0 s
[2025-11-24 23:54:55] 2025-11-25 04:54:21,088 | INFO     | . initial setup = 6 s
[2025-11-24 23:54:55] 2025-11-25 04:54:21,089 | INFO     | . payload setup = 73 s
[2025-11-24 23:54:55] 2025-11-25 04:54:21,089 | INFO     | . stage-in = 0 s
[2025-11-24 23:54:55] 2025-11-25 04:54:21,089 | INFO     | . payload execution = 84548 s
[2025-11-24 23:54:55] 2025-11-25 04:54:21,089 | INFO     | . stage-out = 3 s
[2025-11-24 23:54:55] 2025-11-25 04:54:21,089 | INFO     | . log creation = 0 s
[2025-11-24 23:54:55] 2025-11-25 04:54:21,089 | INFO     | ..............................
[2025-11-24 23:54:55] 2025-11-25 04:54:21,202 | INFO     | 
[2025-11-24 23:54:55] 2025-11-25 04:54:21,202 | INFO     | job summary report
[2025-11-24 23:54:55] 2025-11-25 04:54:21,202 | INFO     | --------------------------------------------------
[2025-11-24 23:54:55] 2025-11-25 04:54:21,203 | INFO     | PanDA job id: 6895351153
[2025-11-24 23:54:55] 2025-11-25 04:54:21,203 | INFO     | task id: 47556149
[2025-11-24 23:54:55] 2025-11-25 04:54:21,203 | INFO     | errors: (none)
[2025-11-24 23:54:55] 2025-11-25 04:54:21,203 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 23:54:55] 2025-11-25 04:54:21,203 | INFO     | pilot state: finished 
[2025-11-24 23:54:55] 2025-11-25 04:54:21,203 | INFO     | transexitcode: 0
[2025-11-24 23:54:55] 2025-11-25 04:54:21,203 | INFO     | exeerrorcode: 0
[2025-11-24 23:54:55] 2025-11-25 04:54:21,203 | INFO     | exeerrordiag: 
[2025-11-24 23:54:55] 2025-11-25 04:54:21,203 | INFO     | exitcode: 0
[2025-11-24 23:54:55] 2025-11-25 04:54:21,204 | INFO     | exitmsg: OK
[2025-11-24 23:54:55] 2025-11-25 04:54:21,204 | INFO     | cpuconsumptiontime: 245671 s
[2025-11-24 23:54:55] 2025-11-25 04:54:21,204 | INFO     | nevents: 1000
[2025-11-24 23:54:55] 2025-11-25 04:54:21,204 | INFO     | neventsw: 0
[2025-11-24 23:54:55] 2025-11-25 04:54:21,204 | INFO     | pid: 1509590
[2025-11-24 23:54:55] 2025-11-25 04:54:21,204 | INFO     | pgrp: 1509590
[2025-11-24 23:54:55] 2025-11-25 04:54:21,204 | INFO     | corecount: 9
[2025-11-24 23:54:55] 2025-11-25 04:54:21,204 | INFO     | event service: False
[2025-11-24 23:54:55] 2025-11-25 04:54:21,204 | INFO     | sizes: {0: 2297877, 1: 2298478, 2: 2298590, 3: 2298618, 4: 2298789, 15: 2298817, 26: 2298973, 37: 2299001, 45: 2299291, 50: 2299319, 84626: 2363209, 84627: 2363488
[2025-11-24 23:54:55] 2025-11-25 04:54:21,204 | INFO     | --------------------------------------------------
[2025-11-24 23:54:55] 2025-11-25 04:54:21,204 | INFO     | 
[2025-11-24 23:54:55] 2025-11-25 04:54:21,209 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-24 23:54:55] 2025-11-25 04:54:21,254 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 23:54:55] 2025-11-25 04:54:21,254 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 23:54:55] 2025-11-25 04:54:21,254 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 23:54:55] 2025-11-25 04:54:21,255 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 23:54:55] 2025-11-25 04:54:21,255 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 23:54:55] 2025-11-25 04:54:21,255 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 23:54:55] 2025-11-25 04:54:21,255 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 23:54:55] 2025-11-25 04:54:21,255 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 23:54:55] 2025-11-25 04:54:21,255 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 23:54:55] 2025-11-25 04:54:21,255 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 23:54:55] 2025-11-25 04:54:21,255 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 23:54:55] 2025-11-25 04:54:21,255 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 23:54:55] 2025-11-25 04:54:21,255 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 23:54:55] 2025-11-25 04:54:21,255 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 23:54:55] 2025-11-25 04:54:21,255 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 23:54:55] 2025-11-25 04:54:21,255 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 23:54:55] 2025-11-25 04:54:21,256 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 23:54:55] 2025-11-25 04:54:21,256 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 23:54:55] 2025-11-25 04:54:21,256 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 23:54:55] 2025-11-25 04:54:21,256 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 23:54:55] 2025-11-25 04:54:21,256 | INFO     | job 6895351153 has completed (purged errors)
[2025-11-24 23:54:55] 2025-11-25 04:54:21,256 | INFO     | overall cleanup function is called
[2025-11-24 23:54:55] 2025-11-25 04:54:22,287 | INFO     | --- collectZombieJob: --- 10, [1509590]
[2025-11-24 23:54:55] 2025-11-25 04:54:22,287 | INFO     | zombie collector waiting for pid 1509590
[2025-11-24 23:54:55] 2025-11-25 04:54:22,287 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 23:54:55] 2025-11-25 04:54:22,287 | INFO     | collected zombie processes
[2025-11-24 23:54:55] 2025-11-25 04:54:22,287 | INFO     | will attempt to kill all subprocesses of pid=1509590
[2025-11-24 23:54:55] 2025-11-25 04:54:22,589 | INFO     | process IDs to be killed: [1509590] (in reverse order)
[2025-11-24 23:54:55] 2025-11-25 04:54:22,686 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 23:54:55] 2025-11-25 04:54:22,686 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 23:54:55] 2025-11-25 04:54:22,698 | INFO     | did not find any defunct processes belonging to 1509590
[2025-11-24 23:54:55] 2025-11-25 04:54:22,712 | INFO     | did not find any defunct processes belonging to 1509590
[2025-11-24 23:54:55] 2025-11-25 04:54:22,713 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 23:54:55] 2025-11-25 04:54:22,714 | INFO     | ready for new job
[2025-11-24 23:54:55] 2025-11-25 04:54:22,714 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 23:54:55] 2025-11-25 04:54:22,722 | INFO     | ***************************************
[2025-11-24 23:54:55] 2025-11-25 04:54:22,722 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 23:54:55] 2025-11-25 04:54:22,722 | INFO     | ***************************************
[2025-11-24 23:54:55] 2025-11-25 04:54:22,722 | INFO     | 
[2025-11-24 23:54:55] 2025-11-25 04:54:22,726 | INFO     | architecture information:
[2025-11-24 23:54:55] 2025-11-25 04:54:22,727 | INFO     | executing command: cat /etc/os-release
[2025-11-24 23:54:55] 2025-11-25 04:54:22,774 | INFO     | cat /etc/os-release:
[2025-11-24 23:54:55] NAME="CentOS Linux"
[2025-11-24 23:54:55] VERSION="7 (Core)"
[2025-11-24 23:54:55] ID="centos"
[2025-11-24 23:54:55] ID_LIKE="rhel fedora"
[2025-11-24 23:54:55] VERSION_ID="7"
[2025-11-24 23:54:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 23:54:55] ANSI_COLOR="0;31"
[2025-11-24 23:54:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 23:54:55] HOME_URL="https://www.centos.org/"
[2025-11-24 23:54:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 23:54:55] 
[2025-11-24 23:54:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 23:54:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 23:54:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 23:54:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 23:54:55] 
[2025-11-24 23:54:55] 2025-11-25 04:54:22,774 | INFO     | ***************************************
[2025-11-24 23:54:55] 2025-11-25 04:54:23,278 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-24 23:54:55] 2025-11-25 04:54:23,328 | INFO     | sufficient remaining disk space (71451017216 B)
[2025-11-24 23:54:55] 2025-11-25 04:54:23,328 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 23:54:55] 2025-11-25 04:54:23,329 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 23:54:55] 2025-11-25 04:54:23,329 | INFO     | update_server=False
[2025-11-24 23:54:55] 2025-11-25 04:54:23,329 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 23:54:55] 2025-11-25 04:54:23,329 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 23:54:55] 2025-11-25 04:54:23,329 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 23:54:55] 2025-11-25 04:54:23,717 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 23:54:55] 2025-11-25 04:54:23,717 | INFO     | aborting loop
[2025-11-24 23:54:55] 2025-11-25 04:54:24,268 | INFO     | all payload control threads have been joined
[2025-11-24 23:54:55] 2025-11-25 04:54:24,272 | INFO     | all data control threads have been joined
[2025-11-24 23:54:55] 2025-11-25 04:54:24,335 | INFO     | [job] retrieve thread has finished
[2025-11-24 23:54:55] 2025-11-25 04:54:24,464 | INFO     | [payload] validate_post thread has finished
[2025-11-24 23:54:55] 2025-11-25 04:54:24,723 | INFO     | [job] job monitor thread has finished
[2025-11-24 23:54:55] 2025-11-25 04:54:24,906 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 23:54:55] 2025-11-25 04:54:24,937 | INFO     | [payload] failed_post thread has finished
[2025-11-24 23:54:55] 2025-11-25 04:54:25,002 | INFO     | all job control threads have been joined
[2025-11-24 23:54:55] 2025-11-25 04:54:25,278 | INFO     | [data] control thread has finished
[2025-11-24 23:54:55] 2025-11-25 04:54:25,283 | INFO     | [payload] control thread has finished
[2025-11-24 23:54:55] 2025-11-25 04:54:25,336 | INFO     | [data] copytool_out thread has finished
[2025-11-24 23:54:55] 2025-11-25 04:54:25,352 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 23:54:55] 2025-11-25 04:54:25,466 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 23:54:55] 2025-11-25 04:54:25,492 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 23:54:55] 2025-11-25 04:54:25,672 | INFO     | [data] copytool_in thread has finished
[2025-11-24 23:54:55] 2025-11-25 04:54:25,760 | INFO     | [job] validate thread has finished
[2025-11-24 23:54:55] 2025-11-25 04:54:26,009 | INFO     | [job] control thread has finished
[2025-11-24 23:54:55] 2025-11-25 04:54:26,229 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 23:54:55] 2025-11-25 04:54:27,235 | INFO     | [job] queue monitor thread has finished
[2025-11-24 23:54:55] 2025-11-25 04:54:27,337 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 23:54:55] 2025-11-25 04:54:28,125 | INFO     | [monitor] cgroup control has ended
[2025-11-24 23:54:55] 2025-11-25 04:54:30,196 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140313184180032)>', '<ExcThread(monitor, started 140312911517440)>']
[2025-11-24 23:54:55] 2025-11-25 04:54:35,222 | INFO     | all workflow threads have been joined
[2025-11-24 23:54:55] 2025-11-25 04:54:35,222 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 23:54:55] 2025-11-25 04:54:35,222 | INFO     | traces error code: 0
[2025-11-24 23:54:55] 2025-11-25 04:54:35,222 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 23:54:55] 2025-11-25 04:54:54,459 | INFO     | PID=1488617 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-24 23:54:55] 2025-11-25 04:54:54,459 | INFO     | .. there are 17 such processes running
[2025-11-24 23:54:55] 2025-11-25 04:54:54,460 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 23:54:55] 2025-11-25 04:54:54,460 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 23:54:55] 2025-11-25 04:54:54,461 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 23:54:55] 2025-11-25 04:54:54,461 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 23:54:55] 2025-11-25 04:54:54,461 | INFO     | [monitor] control thread has ended
[2025-11-24 23:54:55] 2025-11-25 04:54:54,664 [wrapper] ==== pilot stdout END ====
[2025-11-24 23:54:55] 2025-11-25 04:54:54,684 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 23:54:55] 2025-11-25 04:54:54,721 [wrapper] pilotpid: 1488617
[2025-11-24 23:54:55] 2025-11-25 04:54:54,743 [wrapper] Pilot exit status: 0
[2025-11-24 23:54:55] 2025-11-25 04:54:54,815 [wrapper] pandaids: 6895351153
[2025-11-24 23:54:55] 2025-11-25 04:54:54,950 [wrapper] cleanup supervisor_pilot  500753 1488619
[2025-11-24 23:54:55] 2025-11-25 04:54:54,953 [wrapper] Test setup, not cleaning
[2025-11-24 23:54:55] 2025-11-25 04:54:54,956 [wrapper] apfmon messages muted
[2025-11-24 23:54:55] 2025-11-25 04:54:54,958 [wrapper] ==== wrapper stdout END ====
[2025-11-24 23:54:55] 2025-11-25 04:54:54,972 [wrapper] ==== wrapper stderr END ====
[2025-11-24 23:54:55]  *** Error codes and diagnostics ***
[2025-11-24 23:54:55]     "exeErrorCode": 0,
[2025-11-24 23:54:55]     "exeErrorDiag": "",
[2025-11-24 23:54:55]     "pilotErrorCode": 0,
[2025-11-24 23:54:55]     "pilotErrorDiag": "",
[2025-11-24 23:54:55]  *** Listing of results directory ***
[2025-11-24 23:54:55] total 1340420
[2025-11-24 23:54:55] -rw-r--r--. 1 boincer umatlas    576529 Nov 22 18:08 pilot3.tar.gz
[2025-11-24 23:54:55] -rwx------. 1 boincer umatlas     36292 Nov 22 18:23 runpilot2-wrapper.sh
[2025-11-24 23:54:55] -rw-r--r--. 1 boincer umatlas      5112 Nov 22 18:23 queuedata.json
[2025-11-24 23:54:55] -rw-r--r--. 1 boincer umatlas       100 Nov 24 00:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 23:54:55] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 24 00:20 run_atlas
[2025-11-24 23:54:55] -rw-r--r--. 1 boincer umatlas       105 Nov 24 00:20 job.xml
[2025-11-24 23:54:55] -rw-r--r--. 2 boincer umatlas 411993921 Nov 24 00:20 EVNT.47483658._001122.pool.root.1
[2025-11-24 23:54:55] -rw-r--r--. 2 boincer umatlas    590101 Nov 24 00:20 input.tar.gz
[2025-11-24 23:54:55] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 00:20 start_atlas.sh
[2025-11-24 23:54:55] drwxrwx--x. 2 boincer umatlas      4096 Nov 24 00:20 shared
[2025-11-24 23:54:55] -rw-r--r--. 1 boincer umatlas         0 Nov 24 00:20 boinc_lockfile
[2025-11-24 23:54:55] -rw-r--r--. 1 boincer umatlas      2784 Nov 24 00:20 pandaJob.out
[2025-11-24 23:54:55] -rw-------. 1 boincer umatlas        57 Nov 24 00:20 setup.sh.local
[2025-11-24 23:54:55] -rw-------. 1 boincer umatlas    989786 Nov 24 00:21 agis_schedconf.cvmfs.json
[2025-11-24 23:54:55] drwx------. 5 boincer umatlas      4096 Nov 24 00:21 pilot3
[2025-11-24 23:54:55] -rw-r--r--. 1 boincer umatlas       532 Nov 24 23:43 boinc_task_state.xml
[2025-11-24 23:54:55] -rw-r--r--. 1 boincer umatlas      6840 Nov 24 23:48 init_data.xml
[2025-11-24 23:54:55] -rw-------. 1 boincer umatlas 930573856 Nov 24 23:53 HITS.47556149._001082.pool.root.1
[2025-11-24 23:54:55] -rw-------. 1 boincer umatlas      1056 Nov 24 23:53 memory_monitor_summary.json
[2025-11-24 23:54:55] -rw-------. 1 boincer umatlas   1516227 Nov 24 23:54 agis_ddmendpoints.agis.ALL.json
[2025-11-24 23:54:55] -rw-------. 1 boincer umatlas   2516921 Nov 24 23:54 log.47556149._001082.job.log.tgz.1
[2025-11-24 23:54:55] -rw-------. 1 boincer umatlas      8620 Nov 24 23:54 heartbeat.json
[2025-11-24 23:54:55] -rw-r--r--. 1 boincer umatlas        29 Nov 24 23:54 wrapper_checkpoint.txt
[2025-11-24 23:54:55] -rw-r--r--. 1 boincer umatlas      8192 Nov 24 23:54 boinc_mmap_file
[2025-11-24 23:54:55] -rw-------. 1 boincer umatlas        95 Nov 24 23:54 pilot_heartbeat.json
[2025-11-24 23:54:55] -rw-------. 1 boincer umatlas       823 Nov 24 23:54 pilotlog.txt
[2025-11-24 23:54:55] -rw-------. 1 boincer umatlas  10535349 Nov 24 23:54 log.47556149._001082.job.log.1
[2025-11-24 23:54:55] -rw-------. 1 boincer umatlas       353 Nov 24 23:54 output.list
[2025-11-24 23:54:55] -rw-r--r--. 1 boincer umatlas       620 Nov 24 23:54 runtime_log
[2025-11-24 23:54:55] -rw-------. 1 boincer umatlas  13076480 Nov 24 23:54 result.tar.gz
[2025-11-24 23:54:55] -rw-r--r--. 1 boincer umatlas      9343 Nov 24 23:54 runtime_log.err
[2025-11-24 23:54:55] -rw-------. 1 boincer umatlas       660 Nov 24 23:54 H3aLDmH8Bh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmHSKKDmZHBhqm.diag
[2025-11-24 23:54:55] -rw-r--r--. 1 boincer umatlas     21161 Nov 24 23:54 stderr.txt
[2025-11-24 23:54:55] HITS file was successfully produced:
[2025-11-24 23:54:55] -rw-------. 1 boincer umatlas 930573856 Nov 24 23:53 shared/HITS.pool.root.1
[2025-11-24 23:54:55]  *** Contents of shared directory: ***
[2025-11-24 23:54:55] total 1324476
[2025-11-24 23:54:55] -rw-r--r--. 2 boincer umatlas 411993921 Nov 24 00:20 ATLAS.root_0
[2025-11-24 23:54:55] -rw-r--r--. 2 boincer umatlas    590101 Nov 24 00:20 input.tar.gz
[2025-11-24 23:54:55] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 00:20 start_atlas.sh
[2025-11-24 23:54:55] -rw-------. 1 boincer umatlas 930573856 Nov 24 23:53 HITS.pool.root.1
[2025-11-24 23:54:55] -rw-------. 1 boincer umatlas  13076480 Nov 24 23:54 result.tar.gz
23:54:56 (1476874): run_atlas exited; CPU time 247249.980961
23:54:56 (1476874): called boinc_finish(0)

</stderr_txt>
]]>

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