Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:08:26 (244057): wrapper (7.7.26015): starting
08:08:26 (244057): wrapper: running run_atlas (--nthreads 8)
[2025-11-24 08:08:26] Arguments: --nthreads 8
[2025-11-24 08:08:26] Threads: 8
[2025-11-24 08:08:26] Checking for CVMFS
[2025-11-24 08:08:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 08:08:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 08:08:27] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 08:08:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 08:08:27] 2.13.2.0 11163 34464 271336 153246 0 95 23309047 40960001 12211 16776704 0 29766673 99.653 22741904 36845 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-24 08:08:27] CVMFS is ok
[2025-11-24 08:08:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 08:08:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 08:08:27] Further information can be found at the LHC@home message board.
[2025-11-24 08:08:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 08:08:27] Checking for apptainer binary...
[2025-11-24 08:08:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 08:08:27] Running /usr/bin/apptainer --version
[2025-11-24 08:08:27] apptainer version 1.4.4-1.el9
[2025-11-24 08:08:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 08:08:28] c-210-35-1.aglt2.org
[2025-11-24 08:08:28] apptainer works
[2025-11-24 08:08:28] Set ATHENA_PROC_NUMBER=8
[2025-11-24 08:08:28] Set ATHENA_CORE_NUMBER=8
[2025-11-24 08:08:28] Starting ATLAS job with PandaID=6895356820
[2025-11-24 08:08:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 02:13:32]  *** The last 200 lines of the pilot log: ***
[2025-11-25 02:13:32] 2025-11-25 07:12:27,558 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 02:13:32] 2025-11-25 07:12:27,558 | INFO     | PID=248981 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-25 02:13:32] 2025-11-25 07:12:27,558 | INFO     | .. there are 13 such processes running
[2025-11-25 02:13:32] 2025-11-25 07:12:28,563 | INFO     | time since job start (65004s) is within the limit (172800.0s)
[2025-11-25 02:13:32] 2025-11-25 07:12:30,067 | INFO     | monitor loop #4231: job 0:6895356820 is in state 'finished'
[2025-11-25 02:13:32] 2025-11-25 07:12:30,067 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 02:13:32] 2025-11-25 07:12:30,572 | INFO     | time since job start (65006s) is within the limit (172800.0s)
[2025-11-25 02:13:32] 2025-11-25 07:12:32,585 | INFO     | monitor loop #4232: job 0:6895356820 is in state 'finished'
[2025-11-25 02:13:32] 2025-11-25 07:12:32,586 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 02:13:32] 2025-11-25 07:12:32,585 | INFO     | time since job start (65008s) is within the limit (172800.0s)
[2025-11-25 02:13:32] 2025-11-25 07:12:34,605 | INFO     | time since job start (65010s) is within the limit (172800.0s)
[2025-11-25 02:13:32] 2025-11-25 07:12:35,106 | INFO     | monitor loop #4233: job 0:6895356820 is in state 'finished'
[2025-11-25 02:13:32] 2025-11-25 07:12:35,106 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 02:13:32] 2025-11-25 07:12:36,626 | INFO     | time since job start (65012s) is within the limit (172800.0s)
[2025-11-25 02:13:32] 2025-11-25 07:12:36,815 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-25 02:13:32] 2025-11-25 07:12:36,918 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2627.7920178571426
[2025-11-25 02:13:32] 2025-11-25 07:12:37,032 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895356820/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 02:13:32] 2025-11-25 07:12:37,033 | INFO     | extracted standard info from prmon json
[2025-11-25 02:13:32] 2025-11-25 07:12:37,033 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 02:13:32] 2025-11-25 07:12:37,033 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 02:13:32] 2025-11-25 07:12:37,210 | INFO     | fitting pss+swap vs Time
[2025-11-25 02:13:32] 2025-11-25 07:12:37,293 | INFO     | sum of square deviations: 373425220947.04974
[2025-11-25 02:13:32] 2025-11-25 07:12:37,918 | INFO     | monitor loop #4234: job 0:6895356820 is in state 'finished'
[2025-11-25 02:13:32] 2025-11-25 07:12:37,925 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 02:13:32] 2025-11-25 07:12:37,969 | INFO     | sum of deviations: -513371542630.6323
[2025-11-25 02:13:32] 2025-11-25 07:12:37,969 | INFO     | mean x: 1764022256.580827
[2025-11-25 02:13:32] 2025-11-25 07:12:37,969 | INFO     | mean y: 2826378.44924812
[2025-11-25 02:13:32] 2025-11-25 07:12:37,970 | INFO     | intersect: 2427940635.0572095
[2025-11-25 02:13:32] 2025-11-25 07:12:37,971 | INFO     | chi2: 36.859361211574196
[2025-11-25 02:13:32] 2025-11-25 07:12:38,217 | INFO     | sum of square deviations: 368185915567.3662
[2025-11-25 02:13:32] 2025-11-25 07:12:38,703 | INFO     | sum of deviations: -76412689750.72496
[2025-11-25 02:13:32] 2025-11-25 07:12:38,703 | INFO     | mean x: 1764022104.104816
[2025-11-25 02:13:32] 2025-11-25 07:12:38,703 | INFO     | mean y: 2839094.474976393
[2025-11-25 02:13:32] 2025-11-25 07:12:38,703 | INFO     | intersect: 368941294.6274954
[2025-11-25 02:13:32] 2025-11-25 07:12:38,705 | INFO     | chi2: 31.412438143522863
[2025-11-25 02:13:32] 2025-11-25 07:12:38,705 | INFO     | current chi2=31.412438143522863 (change=14.777584008539321 %)
[2025-11-25 02:13:32] 2025-11-25 07:12:38,705 | INFO     | right removable region: 1058
[2025-11-25 02:13:32] 2025-11-25 07:12:38,739 | INFO     | sum of square deviations: 368182617907.36615
[2025-11-25 02:13:32] 2025-11-25 07:12:38,942 | INFO     | time since job start (65014s) is within the limit (172800.0s)
[2025-11-25 02:13:32] 2025-11-25 07:12:39,011 | INFO     | sum of deviations: -854269881910.4817
[2025-11-25 02:13:32] 2025-11-25 07:12:39,012 | INFO     | mean x: 1764022409.104816
[2025-11-25 02:13:32] 2025-11-25 07:12:39,012 | INFO     | mean y: 2836290.0944287064
[2025-11-25 02:13:32] 2025-11-25 07:12:39,012 | INFO     | intersect: 4095781317.424751
[2025-11-25 02:13:32] 2025-11-25 07:12:39,014 | INFO     | chi2: 34.197450850356525
[2025-11-25 02:13:32] 2025-11-25 07:12:39,014 | INFO     | current chi2=34.197450850356525 (change=7.2218027489358825 %)
[2025-11-25 02:13:32] 2025-11-25 07:12:39,014 | INFO     | left removable region: 10
[2025-11-25 02:13:32] 2025-11-25 07:12:39,016 | INFO     | sum of square deviations: 356826353997.8762
[2025-11-25 02:13:32] 2025-11-25 07:12:39,131 | INFO     | sum of deviations: -416330645308.4415
[2025-11-25 02:13:32] 2025-11-25 07:12:39,132 | INFO     | mean x: 1764022378.6517177
[2025-11-25 02:13:32] 2025-11-25 07:12:39,132 | INFO     | mean y: 2854125.439885496
[2025-11-25 02:13:32] 2025-11-25 07:12:39,132 | INFO     | intersect: 2061044522.5734243
[2025-11-25 02:13:32] 2025-11-25 07:12:39,133 | INFO     | chi2: 27.5697721674856
[2025-11-25 02:13:32] 2025-11-25 07:12:39,167 | INFO     | current memory leak: -1.17 B/s (using 1048 data points, chi2=27.57)
[2025-11-25 02:13:32] 2025-11-25 07:12:39,168 | INFO     | could have reported an average CPU frequency of 2827 MHz (39 samples)
[2025-11-25 02:13:32] 2025-11-25 07:12:39,169 | INFO     | ..............................
[2025-11-25 02:13:32] 2025-11-25 07:12:39,169 | INFO     | . Timing measurements:
[2025-11-25 02:13:32] 2025-11-25 07:12:39,169 | INFO     | . get job = 0 s
[2025-11-25 02:13:32] 2025-11-25 07:12:39,169 | INFO     | . initial setup = 3 s
[2025-11-25 02:13:32] 2025-11-25 07:12:39,169 | INFO     | . payload setup = 24 s
[2025-11-25 02:13:32] 2025-11-25 07:12:39,169 | INFO     | . stage-in = 0 s
[2025-11-25 02:13:32] 2025-11-25 07:12:39,169 | INFO     | . payload execution = 64860 s
[2025-11-25 02:13:32] 2025-11-25 07:12:39,169 | INFO     | . stage-out = 26 s
[2025-11-25 02:13:32] 2025-11-25 07:12:39,169 | INFO     | . log creation = 6 s
[2025-11-25 02:13:32] 2025-11-25 07:12:39,170 | INFO     | ..............................
[2025-11-25 02:13:32] 2025-11-25 07:12:39,728 | INFO     | 
[2025-11-25 02:13:32] 2025-11-25 07:12:39,728 | INFO     | job summary report
[2025-11-25 02:13:32] 2025-11-25 07:12:39,728 | INFO     | --------------------------------------------------
[2025-11-25 02:13:32] 2025-11-25 07:12:39,728 | INFO     | PanDA job id: 6895356820
[2025-11-25 02:13:32] 2025-11-25 07:12:39,728 | INFO     | task id: 47556137
[2025-11-25 02:13:32] 2025-11-25 07:12:39,728 | INFO     | errors: (none)
[2025-11-25 02:13:32] 2025-11-25 07:12:39,728 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 02:13:32] 2025-11-25 07:12:39,728 | INFO     | pilot state: finished 
[2025-11-25 02:13:32] 2025-11-25 07:12:39,729 | INFO     | transexitcode: 0
[2025-11-25 02:13:32] 2025-11-25 07:12:39,729 | INFO     | exeerrorcode: 0
[2025-11-25 02:13:32] 2025-11-25 07:12:39,729 | INFO     | exeerrordiag: 
[2025-11-25 02:13:32] 2025-11-25 07:12:39,729 | INFO     | exitcode: 0
[2025-11-25 02:13:32] 2025-11-25 07:12:39,729 | INFO     | exitmsg: OK
[2025-11-25 02:13:32] 2025-11-25 07:12:39,729 | INFO     | cpuconsumptiontime: 235097 s
[2025-11-25 02:13:32] 2025-11-25 07:12:39,729 | INFO     | nevents: 1000
[2025-11-25 02:13:32] 2025-11-25 07:12:39,729 | INFO     | neventsw: 0
[2025-11-25 02:13:32] 2025-11-25 07:12:39,729 | INFO     | pid: 257797
[2025-11-25 02:13:32] 2025-11-25 07:12:39,729 | INFO     | pgrp: 257797
[2025-11-25 02:13:32] 2025-11-25 07:12:39,729 | INFO     | corecount: 8
[2025-11-25 02:13:32] 2025-11-25 07:12:39,729 | INFO     | event service: False
[2025-11-25 02:13:32] 2025-11-25 07:12:39,729 | INFO     | sizes: {0: 2284139, 1: 2284338, 12: 2284338, 19: 2284628, 23: 2284656, 64891: 2340867, 64892: 2340994, 64920: 2350044, 64921: 2350100, 64972: 2350346}
[2025-11-25 02:13:32] 2025-11-25 07:12:39,729 | INFO     | --------------------------------------------------
[2025-11-25 02:13:32] 2025-11-25 07:12:39,729 | INFO     | 
[2025-11-25 02:13:32] 2025-11-25 07:12:39,730 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-25 02:13:32] 2025-11-25 07:12:39,912 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 02:13:32] 2025-11-25 07:12:39,913 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 02:13:32] 2025-11-25 07:12:39,913 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 02:13:32] 2025-11-25 07:12:39,913 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 02:13:32] 2025-11-25 07:12:39,913 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 02:13:32] 2025-11-25 07:12:39,914 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 02:13:32] 2025-11-25 07:12:39,914 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 02:13:32] 2025-11-25 07:12:39,914 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 02:13:32] 2025-11-25 07:12:39,914 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 02:13:32] 2025-11-25 07:12:39,914 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 02:13:32] 2025-11-25 07:12:39,914 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 02:13:32] 2025-11-25 07:12:39,914 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 02:13:32] 2025-11-25 07:12:39,914 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 02:13:32] 2025-11-25 07:12:39,914 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 02:13:32] 2025-11-25 07:12:39,914 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 02:13:32] 2025-11-25 07:12:39,914 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 02:13:32] 2025-11-25 07:12:39,915 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 02:13:32] 2025-11-25 07:12:39,915 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 02:13:32] 2025-11-25 07:12:39,915 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 02:13:32] 2025-11-25 07:12:39,915 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 02:13:32] 2025-11-25 07:12:39,915 | INFO     | job 6895356820 has completed (purged errors)
[2025-11-25 02:13:32] 2025-11-25 07:12:39,916 | INFO     | overall cleanup function is called
[2025-11-25 02:13:32] 2025-11-25 07:12:40,953 | INFO     | --- collectZombieJob: --- 10, [257797]
[2025-11-25 02:13:32] 2025-11-25 07:12:40,953 | INFO     | zombie collector waiting for pid 257797
[2025-11-25 02:13:32] 2025-11-25 07:12:40,953 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 02:13:32] 2025-11-25 07:12:41,044 | INFO     | collected zombie processes
[2025-11-25 02:13:32] 2025-11-25 07:12:41,044 | INFO     | will attempt to kill all subprocesses of pid=257797
[2025-11-25 02:13:32] 2025-11-25 07:12:43,898 | INFO     | process IDs to be killed: [257797] (in reverse order)
[2025-11-25 02:13:32] 2025-11-25 07:12:44,023 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 02:13:32] 2025-11-25 07:12:44,024 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 02:13:32] 2025-11-25 07:12:44,045 | INFO     | did not find any defunct processes belonging to 257797
[2025-11-25 02:13:32] 2025-11-25 07:12:44,064 | INFO     | did not find any defunct processes belonging to 257797
[2025-11-25 02:13:32] 2025-11-25 07:12:44,073 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 02:13:32] 2025-11-25 07:12:44,073 | INFO     | ready for new job
[2025-11-25 02:13:32] 2025-11-25 07:12:44,073 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 02:13:32] 2025-11-25 07:12:44,086 | INFO     | ***************************************
[2025-11-25 02:13:32] 2025-11-25 07:12:44,087 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 02:13:32] 2025-11-25 07:12:44,087 | INFO     | ***************************************
[2025-11-25 02:13:32] 2025-11-25 07:12:44,087 | INFO     | 
[2025-11-25 02:13:32] 2025-11-25 07:12:44,097 | INFO     | architecture information:
[2025-11-25 02:13:32] 2025-11-25 07:12:44,098 | INFO     | executing command: cat /etc/os-release
[2025-11-25 02:13:32] 2025-11-25 07:12:44,233 | INFO     | cat /etc/os-release:
[2025-11-25 02:13:32] NAME="CentOS Linux"
[2025-11-25 02:13:32] VERSION="7 (Core)"
[2025-11-25 02:13:32] ID="centos"
[2025-11-25 02:13:32] ID_LIKE="rhel fedora"
[2025-11-25 02:13:32] VERSION_ID="7"
[2025-11-25 02:13:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 02:13:32] ANSI_COLOR="0;31"
[2025-11-25 02:13:32] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 02:13:32] HOME_URL="https://www.centos.org/"
[2025-11-25 02:13:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 02:13:32] 
[2025-11-25 02:13:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 02:13:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 02:13:32] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 02:13:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 02:13:32] 
[2025-11-25 02:13:32] 2025-11-25 07:12:44,233 | INFO     | ***************************************
[2025-11-25 02:13:32] 2025-11-25 07:12:44,757 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-25 02:13:32] 2025-11-25 07:12:45,033 | INFO     | sufficient remaining disk space (69307727872 B)
[2025-11-25 02:13:32] 2025-11-25 07:12:45,034 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 02:13:32] 2025-11-25 07:12:45,034 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 02:13:32] 2025-11-25 07:12:45,034 | INFO     | update_server=False
[2025-11-25 02:13:32] 2025-11-25 07:12:45,034 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 02:13:32] 2025-11-25 07:12:45,048 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 02:13:32] 2025-11-25 07:12:45,062 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 02:13:32] 2025-11-25 07:12:45,062 | INFO     | aborting loop
[2025-11-25 02:13:32] 2025-11-25 07:12:45,069 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 02:13:32] 2025-11-25 07:12:45,455 | INFO     | all payload control threads have been joined
[2025-11-25 02:13:32] 2025-11-25 07:12:45,470 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 02:13:32] 2025-11-25 07:12:45,573 | INFO     | all data control threads have been joined
[2025-11-25 02:13:32] 2025-11-25 07:12:45,779 | INFO     | all job control threads have been joined
[2025-11-25 02:13:32] 2025-11-25 07:12:46,040 | INFO     | [job] retrieve thread has finished
[2025-11-25 02:13:32] 2025-11-25 07:12:46,054 | INFO     | [job] queue monitor thread has finished
[2025-11-25 02:13:32] 2025-11-25 07:12:46,102 | INFO     | [job] job monitor thread has finished
[2025-11-25 02:13:32] 2025-11-25 07:12:46,424 | INFO     | [payload] validate_post thread has finished
[2025-11-25 02:13:32] 2025-11-25 07:12:46,469 | INFO     | [payload] control thread has finished
[2025-11-25 02:13:32] 2025-11-25 07:12:46,610 | INFO     | [data] control thread has finished
[2025-11-25 02:13:32] 2025-11-25 07:12:46,732 | INFO     | [job] validate thread has finished
[2025-11-25 02:13:32] 2025-11-25 07:12:46,809 | INFO     | [job] control thread has finished
[2025-11-25 02:13:32] 2025-11-25 07:12:46,881 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 02:13:32] 2025-11-25 07:12:47,115 | INFO     | [data] copytool_out thread has finished
[2025-11-25 02:13:32] 2025-11-25 07:12:47,369 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 02:13:32] 2025-11-25 07:12:47,375 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 02:13:32] 2025-11-25 07:12:47,382 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 02:13:32] 2025-11-25 07:12:47,382 | INFO     | [data] copytool_in thread has finished
[2025-11-25 02:13:32] 2025-11-25 07:12:47,618 | INFO     | [payload] failed_post thread has finished
[2025-11-25 02:13:32] 2025-11-25 07:12:49,479 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 02:13:32] 2025-11-25 07:12:59,511 | INFO     | [monitor] cgroup control has ended
[2025-11-25 02:13:32] 2025-11-25 07:12:59,729 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140700378986304)>', '<ExcThread(monitor, started 140699865425664)>']
[2025-11-25 02:13:32] 2025-11-25 07:13:04,776 | INFO     | all workflow threads have been joined
[2025-11-25 02:13:32] 2025-11-25 07:13:04,776 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 02:13:32] 2025-11-25 07:13:04,776 | INFO     | traces error code: 0
[2025-11-25 02:13:32] 2025-11-25 07:13:04,777 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 02:13:32] 2025-11-25 07:13:23,246 | INFO     | PID=248981 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-25 02:13:32] 2025-11-25 07:13:23,247 | INFO     | .. there are 13 such processes running
[2025-11-25 02:13:32] 2025-11-25 07:13:23,462 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 02:13:32] 2025-11-25 07:13:23,463 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 02:13:32] 2025-11-25 07:13:23,463 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 02:13:32] 2025-11-25 07:13:23,463 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 02:13:32] 2025-11-25 07:13:23,463 | INFO     | [monitor] control thread has ended
[2025-11-25 02:13:32] 2025-11-25 07:13:30,298 [wrapper] ==== pilot stdout END ====
[2025-11-25 02:13:32] 2025-11-25 07:13:30,349 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 02:13:32] 2025-11-25 07:13:30,405 [wrapper] pilotpid: 248981
[2025-11-25 02:13:32] 2025-11-25 07:13:30,408 [wrapper] Pilot exit status: 0
[2025-11-25 02:13:32] 2025-11-25 07:13:30,590 [wrapper] pandaids: 6895356820
[2025-11-25 02:13:32] 2025-11-25 07:13:31,529 [wrapper] cleanup supervisor_pilot 1862747 248982
[2025-11-25 02:13:32] 2025-11-25 07:13:31,580 [wrapper] Test setup, not cleaning
[2025-11-25 02:13:32] 2025-11-25 07:13:31,600 [wrapper] apfmon messages muted
[2025-11-25 02:13:32] 2025-11-25 07:13:31,642 [wrapper] ==== wrapper stdout END ====
[2025-11-25 02:13:32] 2025-11-25 07:13:31,678 [wrapper] ==== wrapper stderr END ====
[2025-11-25 02:13:32]  *** Error codes and diagnostics ***
[2025-11-25 02:13:32]     "exeErrorCode": 0,
[2025-11-25 02:13:32]     "exeErrorDiag": "",
[2025-11-25 02:13:32]     "pilotErrorCode": 0,
[2025-11-25 02:13:32]     "pilotErrorDiag": "",
[2025-11-25 02:13:32]  *** Listing of results directory ***
[2025-11-25 02:13:32] total 1316652
[2025-11-25 02:13:32] -rw-r--r--. 1 boincer umatlas    576529 Nov 23 06:12 pilot3.tar.gz
[2025-11-25 02:13:32] -rwx------. 1 boincer umatlas     36292 Nov 23 06:30 runpilot2-wrapper.sh
[2025-11-25 02:13:32] -rw-r--r--. 1 boincer umatlas      5112 Nov 23 06:30 queuedata.json
[2025-11-25 02:13:32] -rw-r--r--. 1 boincer umatlas       100 Nov 24 08:08 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 02:13:32] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 24 08:08 run_atlas
[2025-11-25 02:13:32] -rw-r--r--. 1 boincer umatlas       105 Nov 24 08:08 job.xml
[2025-11-25 02:13:32] -rw-r--r--. 2 boincer umatlas 409183521 Nov 24 08:08 EVNT.47483658._000706.pool.root.1
[2025-11-25 02:13:32] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 08:08 start_atlas.sh
[2025-11-25 02:13:32] drwxrwx--x. 2 boincer umatlas      4096 Nov 24 08:08 shared
[2025-11-25 02:13:32] -rw-r--r--. 2 boincer umatlas    590108 Nov 24 08:08 input.tar.gz
[2025-11-25 02:13:32] -rw-r--r--. 1 boincer umatlas         0 Nov 24 08:08 boinc_lockfile
[2025-11-25 02:13:32] -rw-r--r--. 1 boincer umatlas      2786 Nov 24 08:08 pandaJob.out
[2025-11-25 02:13:32] -rw-------. 1 boincer umatlas        57 Nov 24 08:08 setup.sh.local
[2025-11-25 02:13:32] -rw-------. 1 boincer umatlas    988279 Nov 24 08:09 agis_schedconf.cvmfs.json
[2025-11-25 02:13:32] drwx------. 5 boincer umatlas      4096 Nov 24 08:09 pilot3
[2025-11-25 02:13:32] -rw-r--r--. 1 boincer umatlas       533 Nov 25 00:54 boinc_task_state.xml
[2025-11-25 02:13:32] -rw-------. 1 boincer umatlas 913404153 Nov 25 02:04 HITS.47556137._007014.pool.root.1
[2025-11-25 02:13:32] -rw-------. 1 boincer umatlas      1056 Nov 25 02:11 memory_monitor_summary.json
[2025-11-25 02:13:32] -rw-------. 1 boincer umatlas   1516227 Nov 25 02:11 agis_ddmendpoints.agis.ALL.json
[2025-11-25 02:13:32] -rw-------. 1 boincer umatlas   2224581 Nov 25 02:11 log.47556137._007014.job.log.tgz.1
[2025-11-25 02:13:32] -rw-------. 1 boincer umatlas      8629 Nov 25 02:12 heartbeat.json
[2025-11-25 02:13:32] -rw-r--r--. 1 boincer umatlas      6844 Nov 25 02:12 init_data.xml
[2025-11-25 02:13:32] -rw-------. 1 boincer umatlas        95 Nov 25 02:13 pilot_heartbeat.json
[2025-11-25 02:13:32] -rw-------. 1 boincer umatlas       822 Nov 25 02:13 pilotlog.txt
[2025-11-25 02:13:32] -rw-r--r--. 1 boincer umatlas        29 Nov 25 02:13 wrapper_checkpoint.txt
[2025-11-25 02:13:32] -rw-r--r--. 1 boincer umatlas      8192 Nov 25 02:13 boinc_mmap_file
[2025-11-25 02:13:32] -rw-------. 1 boincer umatlas   8649818 Nov 25 02:13 log.47556137._007014.job.log.1
[2025-11-25 02:13:32] -rw-------. 1 boincer umatlas       353 Nov 25 02:13 output.list
[2025-11-25 02:13:32] -rw-r--r--. 1 boincer umatlas       620 Nov 25 02:13 runtime_log
[2025-11-25 02:13:32] -rw-------. 1 boincer umatlas  10895360 Nov 25 02:13 result.tar.gz
[2025-11-25 02:13:32] -rw-------. 1 boincer umatlas       663 Nov 25 02:13 xBrMDmuTNh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmUqKKDmGKxAIm.diag
[2025-11-25 02:13:32] -rw-r--r--. 1 boincer umatlas      9353 Nov 25 02:13 runtime_log.err
[2025-11-25 02:13:32] -rw-r--r--. 1 boincer umatlas     21874 Nov 25 02:13 stderr.txt
[2025-11-25 02:13:32] HITS file was successfully produced:
[2025-11-25 02:13:32] -rw-------. 1 boincer umatlas 913404153 Nov 25 02:04 shared/HITS.pool.root.1
[2025-11-25 02:13:32]  *** Contents of shared directory: ***
[2025-11-25 02:13:32] total 1302836
[2025-11-25 02:13:32] -rw-r--r--. 2 boincer umatlas 409183521 Nov 24 08:08 ATLAS.root_0
[2025-11-25 02:13:32] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 08:08 start_atlas.sh
[2025-11-25 02:13:32] -rw-r--r--. 2 boincer umatlas    590108 Nov 24 08:08 input.tar.gz
[2025-11-25 02:13:32] -rw-------. 1 boincer umatlas 913404153 Nov 25 02:04 HITS.pool.root.1
[2025-11-25 02:13:32] -rw-------. 1 boincer umatlas  10895360 Nov 25 02:13 result.tar.gz
02:13:34 (244057): run_atlas exited; CPU time 235935.436776
02:13:34 (244057): called boinc_finish(0)

</stderr_txt>
]]>

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