Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:39:26 (1274420): wrapper (7.7.26015): starting
17:39:26 (1274420): wrapper: running run_atlas (--nthreads 8)
[2025-11-24 17:39:26] Arguments: --nthreads 8
[2025-11-24 17:39:26] Threads: 8
[2025-11-24 17:39:26] Checking for CVMFS
[2025-11-24 17:39:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 17:39:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 17:39:27] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 17:39:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 17:39:29] 2.13.3.0 12601 27782 381252 153261 3 685 29553150 32935936 31433 16776704 0 130162077 99.478 168422470 34199 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-24 17:39:29] CVMFS is ok
[2025-11-24 17:39:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 17:39:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 17:39:29] Further information can be found at the LHC@home message board.
[2025-11-24 17:39:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 17:39:29] Checking for apptainer binary...
[2025-11-24 17:39:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 17:39:29] Running /usr/bin/apptainer --version
[2025-11-24 17:39:29] apptainer version 1.4.4-1.el9
[2025-11-24 17:39:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 17:39:29] c6-12-27-4.aglt2.org
[2025-11-24 17:39:29] apptainer works
[2025-11-24 17:39:29] Set ATHENA_PROC_NUMBER=8
[2025-11-24 17:39:29] Set ATHENA_CORE_NUMBER=8
[2025-11-24 17:39:29] Starting ATLAS job with PandaID=6895356797
[2025-11-24 17:39:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 08:37:27]  *** The last 200 lines of the pilot log: ***
[2025-11-26 08:37:27] 2025-11-26 13:36:19,142 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 08:37:27] 2025-11-26 13:36:19,580 | INFO     | time since job start (140151s) is within the limit (172800.0s)
[2025-11-26 08:37:27] 2025-11-26 13:36:21,587 | INFO     | time since job start (140153s) is within the limit (172800.0s)
[2025-11-26 08:37:27] 2025-11-26 13:36:21,654 | INFO     | monitor loop #6695: job 0:6895356797 is in state 'finished'
[2025-11-26 08:37:27] 2025-11-26 13:36:21,654 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 08:37:27] 2025-11-26 13:36:23,594 | INFO     | time since job start (140155s) is within the limit (172800.0s)
[2025-11-26 08:37:27] 2025-11-26 13:36:24,167 | INFO     | monitor loop #6696: job 0:6895356797 is in state 'finished'
[2025-11-26 08:37:27] 2025-11-26 13:36:24,167 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 08:37:27] 2025-11-26 13:36:25,601 | INFO     | time since job start (140157s) is within the limit (172800.0s)
[2025-11-26 08:37:27] 2025-11-26 13:36:26,672 | INFO     | monitor loop #6697: job 0:6895356797 is in state 'finished'
[2025-11-26 08:37:27] 2025-11-26 13:36:26,672 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 08:37:27] 2025-11-26 13:36:27,608 | INFO     | time since job start (140159s) is within the limit (172800.0s)
[2025-11-26 08:37:27] 2025-11-26 13:36:29,200 | INFO     | monitor loop #6698: job 0:6895356797 is in state 'finished'
[2025-11-26 08:37:27] 2025-11-26 13:36:29,200 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 08:37:27] 2025-11-26 13:36:29,617 | INFO     | time since job start (140161s) is within the limit (172800.0s)
[2025-11-26 08:37:27] 2025-11-26 13:36:30,185 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-26 08:37:27] 2025-11-26 13:36:30,205 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2641.394468750001
[2025-11-26 08:37:27] 2025-11-26 13:36:30,290 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6895356797/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 08:37:27] 2025-11-26 13:36:30,292 | INFO     | extracted standard info from prmon json
[2025-11-26 08:37:27] 2025-11-26 13:36:30,293 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 08:37:27] 2025-11-26 13:36:30,293 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 08:37:27] 2025-11-26 13:36:30,388 | INFO     | fitting pss+swap vs Time
[2025-11-26 08:37:27] 2025-11-26 13:36:30,396 | INFO     | sum of square deviations: 3748087378756.8076
[2025-11-26 08:37:27] 2025-11-26 13:36:30,671 | INFO     | sum of deviations: 10061225595215.822
[2025-11-26 08:37:27] 2025-11-26 13:36:30,672 | INFO     | mean x: 1764094128.5202615
[2025-11-26 08:37:27] 2025-11-26 13:36:30,672 | INFO     | mean y: 2904750.88540305
[2025-11-26 08:37:27] 2025-11-26 13:36:30,676 | INFO     | intersect: -4732563557.253428
[2025-11-26 08:37:27] 2025-11-26 13:36:30,679 | INFO     | chi2: 18.670472291406654
[2025-11-26 08:37:27] 2025-11-26 13:36:30,688 | INFO     | sum of square deviations: 3723645628576.9185
[2025-11-26 08:37:27] 2025-11-26 13:36:30,902 | INFO     | sum of deviations: 10846161512375.486
[2025-11-26 08:37:27] 2025-11-26 13:36:30,902 | INFO     | mean x: 1764093976.030131
[2025-11-26 08:37:27] 2025-11-26 13:36:30,902 | INFO     | mean y: 2909647.586899563
[2025-11-26 08:37:27] 2025-11-26 13:36:30,902 | INFO     | intersect: -5135508476.896079
[2025-11-26 08:37:27] 2025-11-26 13:36:30,905 | INFO     | chi2: 15.418941237651117
[2025-11-26 08:37:27] 2025-11-26 13:36:30,905 | INFO     | current chi2=15.418941237651117 (change=17.415365840810036 %)
[2025-11-26 08:37:27] 2025-11-26 13:36:30,905 | INFO     | right removable region: 2289
[2025-11-26 08:37:27] 2025-11-26 13:36:30,908 | INFO     | sum of square deviations: 3723639300436.9224
[2025-11-26 08:37:27] 2025-11-26 13:36:31,010 | INFO     | sum of deviations: 9184244153476.248
[2025-11-26 08:37:27] 2025-11-26 13:36:31,011 | INFO     | mean x: 1764094281.030131
[2025-11-26 08:37:27] 2025-11-26 13:36:31,011 | INFO     | mean y: 2910220.793449782
[2025-11-26 08:37:27] 2025-11-26 13:36:31,011 | INFO     | intersect: -4348175176.98683
[2025-11-26 08:37:27] 2025-11-26 13:36:31,014 | INFO     | chi2: 15.007473677266493
[2025-11-26 08:37:27] 2025-11-26 13:36:31,014 | INFO     | current chi2=15.007473677266493 (change=19.619207039696086 %)
[2025-11-26 08:37:27] 2025-11-26 13:36:31,014 | INFO     | left removable region: 10
[2025-11-26 08:37:27] 2025-11-26 13:36:31,017 | INFO     | sum of square deviations: 3670235722411.585
[2025-11-26 08:37:27] 2025-11-26 13:36:31,118 | INFO     | sum of deviations: 9474784334797.316
[2025-11-26 08:37:27] 2025-11-26 13:36:31,119 | INFO     | mean x: 1764094250.5519965
[2025-11-26 08:37:27] 2025-11-26 13:36:31,119 | INFO     | mean y: 2920127.697674419
[2025-11-26 08:37:27] 2025-11-26 13:36:31,119 | INFO     | intersect: -4551123218.393896
[2025-11-26 08:37:27] 2025-11-26 13:36:31,122 | INFO     | chi2: 9.249016868721545
[2025-11-26 08:37:27] 2025-11-26 13:36:31,122 | INFO     | current memory leak: 2.58 B/s (using 2279 data points, chi2=9.25)
[2025-11-26 08:37:27] 2025-11-26 13:36:31,125 | INFO     | could have reported an average CPU frequency of 2639 MHz (79 samples)
[2025-11-26 08:37:27] 2025-11-26 13:36:31,125 | INFO     | ..............................
[2025-11-26 08:37:27] 2025-11-26 13:36:31,125 | INFO     | . Timing measurements:
[2025-11-26 08:37:27] 2025-11-26 13:36:31,125 | INFO     | . get job = 0 s
[2025-11-26 08:37:27] 2025-11-26 13:36:31,125 | INFO     | . initial setup = 4 s
[2025-11-26 08:37:27] 2025-11-26 13:36:31,126 | INFO     | . payload setup = 40 s
[2025-11-26 08:37:27] 2025-11-26 13:36:31,126 | INFO     | . stage-in = 0 s
[2025-11-26 08:37:27] 2025-11-26 13:36:31,126 | INFO     | . payload execution = 140006 s
[2025-11-26 08:37:27] 2025-11-26 13:36:31,126 | INFO     | . stage-out = 12 s
[2025-11-26 08:37:27] 2025-11-26 13:36:31,126 | INFO     | . log creation = 4 s
[2025-11-26 08:37:27] 2025-11-26 13:36:31,126 | INFO     | ..............................
[2025-11-26 08:37:27] 2025-11-26 13:36:31,301 | INFO     | 
[2025-11-26 08:37:27] 2025-11-26 13:36:31,301 | INFO     | job summary report
[2025-11-26 08:37:27] 2025-11-26 13:36:31,301 | INFO     | --------------------------------------------------
[2025-11-26 08:37:27] 2025-11-26 13:36:31,301 | INFO     | PanDA job id: 6895356797
[2025-11-26 08:37:27] 2025-11-26 13:36:31,301 | INFO     | task id: 47556137
[2025-11-26 08:37:27] 2025-11-26 13:36:31,302 | INFO     | errors: (none)
[2025-11-26 08:37:27] 2025-11-26 13:36:31,302 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 08:37:27] 2025-11-26 13:36:31,302 | INFO     | pilot state: finished 
[2025-11-26 08:37:27] 2025-11-26 13:36:31,302 | INFO     | transexitcode: 0
[2025-11-26 08:37:27] 2025-11-26 13:36:31,302 | INFO     | exeerrorcode: 0
[2025-11-26 08:37:27] 2025-11-26 13:36:31,302 | INFO     | exeerrordiag: 
[2025-11-26 08:37:27] 2025-11-26 13:36:31,302 | INFO     | exitcode: 0
[2025-11-26 08:37:27] 2025-11-26 13:36:31,302 | INFO     | exitmsg: OK
[2025-11-26 08:37:27] 2025-11-26 13:36:31,302 | INFO     | cpuconsumptiontime: 275042 s
[2025-11-26 08:37:27] 2025-11-26 13:36:31,302 | INFO     | nevents: 1000
[2025-11-26 08:37:27] 2025-11-26 13:36:31,302 | INFO     | neventsw: 0
[2025-11-26 08:37:27] 2025-11-26 13:36:31,302 | INFO     | pid: 1291247
[2025-11-26 08:37:27] 2025-11-26 13:36:31,302 | INFO     | pgrp: 1291247
[2025-11-26 08:37:27] 2025-11-26 13:36:31,303 | INFO     | corecount: 8
[2025-11-26 08:37:27] 2025-11-26 13:36:31,303 | INFO     | event service: False
[2025-11-26 08:37:27] 2025-11-26 13:36:31,303 | INFO     | sizes: {0: 2284133, 1: 2284332, 12: 2284332, 23: 2284360, 31: 2284650, 34: 2284678, 140051: 2371508, 140052: 2371507, 140066: 2380590, 140069: 2380646, 140101: 238
[2025-11-26 08:37:27] 2025-11-26 13:36:31,303 | INFO     | --------------------------------------------------
[2025-11-26 08:37:27] 2025-11-26 13:36:31,303 | INFO     | 
[2025-11-26 08:37:27] 2025-11-26 13:36:31,303 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-26 08:37:27] 2025-11-26 13:36:31,564 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 08:37:27] 2025-11-26 13:36:31,565 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 08:37:27] 2025-11-26 13:36:31,565 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 08:37:27] 2025-11-26 13:36:31,565 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 08:37:27] 2025-11-26 13:36:31,565 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 08:37:27] 2025-11-26 13:36:31,565 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 08:37:27] 2025-11-26 13:36:31,565 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 08:37:27] 2025-11-26 13:36:31,565 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 08:37:27] 2025-11-26 13:36:31,565 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 08:37:27] 2025-11-26 13:36:31,565 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 08:37:27] 2025-11-26 13:36:31,567 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 08:37:27] 2025-11-26 13:36:31,567 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 08:37:27] 2025-11-26 13:36:31,567 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 08:37:27] 2025-11-26 13:36:31,567 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 08:37:27] 2025-11-26 13:36:31,567 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 08:37:27] 2025-11-26 13:36:31,567 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 08:37:27] 2025-11-26 13:36:31,568 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 08:37:27] 2025-11-26 13:36:31,568 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 08:37:27] 2025-11-26 13:36:31,568 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 08:37:27] 2025-11-26 13:36:31,568 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 08:37:27] 2025-11-26 13:36:31,572 | INFO     | job 6895356797 has completed (purged errors)
[2025-11-26 08:37:27] 2025-11-26 13:36:31,572 | INFO     | overall cleanup function is called
[2025-11-26 08:37:27] 2025-11-26 13:36:32,617 | INFO     | --- collectZombieJob: --- 10, [1291247]
[2025-11-26 08:37:27] 2025-11-26 13:36:32,618 | INFO     | zombie collector waiting for pid 1291247
[2025-11-26 08:37:27] 2025-11-26 13:36:32,618 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 08:37:27] 2025-11-26 13:36:32,618 | INFO     | collected zombie processes
[2025-11-26 08:37:27] 2025-11-26 13:36:32,618 | INFO     | will attempt to kill all subprocesses of pid=1291247
[2025-11-26 08:37:27] 2025-11-26 13:36:34,587 | INFO     | process IDs to be killed: [1291247] (in reverse order)
[2025-11-26 08:37:27] 2025-11-26 13:36:35,413 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 08:37:27] 2025-11-26 13:36:35,413 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 08:37:27] 2025-11-26 13:36:35,580 | INFO     | did not find any defunct processes belonging to 1291247
[2025-11-26 08:37:27] 2025-11-26 13:36:35,658 | INFO     | did not find any defunct processes belonging to 1291247
[2025-11-26 08:37:27] 2025-11-26 13:36:35,660 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 08:37:27] 2025-11-26 13:36:35,660 | INFO     | ready for new job
[2025-11-26 08:37:27] 2025-11-26 13:36:35,660 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 08:37:27] 2025-11-26 13:36:35,669 | INFO     | ***************************************
[2025-11-26 08:37:27] 2025-11-26 13:36:35,669 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 08:37:27] 2025-11-26 13:36:35,669 | INFO     | ***************************************
[2025-11-26 08:37:27] 2025-11-26 13:36:35,669 | INFO     | 
[2025-11-26 08:37:27] 2025-11-26 13:36:35,675 | INFO     | architecture information:
[2025-11-26 08:37:27] 2025-11-26 13:36:35,691 | INFO     | executing command: cat /etc/os-release
[2025-11-26 08:37:27] 2025-11-26 13:36:35,734 | INFO     | cat /etc/os-release:
[2025-11-26 08:37:27] NAME="CentOS Linux"
[2025-11-26 08:37:27] VERSION="7 (Core)"
[2025-11-26 08:37:27] ID="centos"
[2025-11-26 08:37:27] ID_LIKE="rhel fedora"
[2025-11-26 08:37:27] VERSION_ID="7"
[2025-11-26 08:37:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 08:37:27] ANSI_COLOR="0;31"
[2025-11-26 08:37:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 08:37:27] HOME_URL="https://www.centos.org/"
[2025-11-26 08:37:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 08:37:27] 
[2025-11-26 08:37:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 08:37:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 08:37:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 08:37:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 08:37:27] 
[2025-11-26 08:37:27] 2025-11-26 13:36:35,735 | INFO     | ***************************************
[2025-11-26 08:37:27] 2025-11-26 13:36:36,240 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-26 08:37:27] 2025-11-26 13:36:36,310 | INFO     | sufficient remaining disk space (88847941632 B)
[2025-11-26 08:37:27] 2025-11-26 13:36:36,311 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 08:37:27] 2025-11-26 13:36:36,311 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 08:37:27] 2025-11-26 13:36:36,311 | INFO     | update_server=False
[2025-11-26 08:37:27] 2025-11-26 13:36:36,311 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 08:37:27] 2025-11-26 13:36:36,325 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 08:37:27] 2025-11-26 13:36:36,556 | INFO     | all payload control threads have been joined
[2025-11-26 08:37:27] 2025-11-26 13:36:36,714 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 08:37:27] 2025-11-26 13:36:36,765 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-26 08:37:27] 2025-11-26 13:36:36,765 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-26 08:37:27] 2025-11-26 13:36:36,769 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 08:37:27] 2025-11-26 13:36:36,769 | INFO     | will abort loop
[2025-11-26 08:37:27] 2025-11-26 13:36:36,994 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 08:37:27] 2025-11-26 13:36:37,070 | INFO     | all job control threads have been joined
[2025-11-26 08:37:27] 2025-11-26 13:36:37,316 | INFO     | [job] retrieve thread has finished
[2025-11-26 08:37:27] 2025-11-26 13:36:37,331 | INFO     | [job] queue monitor thread has finished
[2025-11-26 08:37:27] 2025-11-26 13:36:37,427 | INFO     | all data control threads have been joined
[2025-11-26 08:37:27] 2025-11-26 13:36:37,442 | INFO     | [payload] failed_post thread has finished
[2025-11-26 08:37:27] 2025-11-26 13:36:37,502 | INFO     | [data] copytool_in thread has finished
[2025-11-26 08:37:27] 2025-11-26 13:36:37,582 | INFO     | [payload] control thread has finished
[2025-11-26 08:37:27] 2025-11-26 13:36:37,746 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 08:37:27] 2025-11-26 13:36:37,784 | INFO     | [job] job monitor thread has finished
[2025-11-26 08:37:27] 2025-11-26 13:36:38,076 | INFO     | [job] control thread has finished
[2025-11-26 08:37:27] 2025-11-26 13:36:38,355 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 08:37:27] 2025-11-26 13:36:38,356 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 08:37:27] 2025-11-26 13:36:38,433 | INFO     | [data] control thread has finished
[2025-11-26 08:37:27] 2025-11-26 13:36:38,482 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 08:37:27] 2025-11-26 13:36:38,640 | INFO     | [payload] validate_post thread has finished
[2025-11-26 08:37:27] 2025-11-26 13:36:38,722 | INFO     | [job] validate thread has finished
[2025-11-26 08:37:27] 2025-11-26 13:36:39,001 | INFO     | [data] copytool_out thread has finished
[2025-11-26 08:37:27] 2025-11-26 13:36:40,738 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 08:37:27] 2025-11-26 13:36:58,883 | INFO     | [monitor] cgroup control has ended
[2025-11-26 08:37:27] 2025-11-26 13:36:59,969 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139704937285440)>', '<ExcThread(monitor, started 139704573863680)>']
[2025-11-26 08:37:27] 2025-11-26 13:37:05,053 | INFO     | all workflow threads have been joined
[2025-11-26 08:37:27] 2025-11-26 13:37:05,053 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 08:37:27] 2025-11-26 13:37:05,054 | INFO     | traces error code: 0
[2025-11-26 08:37:27] 2025-11-26 13:37:05,054 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 08:37:27] 2025-11-26 13:37:05,687 | INFO     | PID=1280344 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 08:37:27] 2025-11-26 13:37:05,688 | INFO     | .. there are 51 such processes running
[2025-11-26 08:37:27] 2025-11-26 13:37:05,689 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 08:37:27] 2025-11-26 13:37:05,689 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 08:37:27] 2025-11-26 13:37:05,689 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 08:37:27] 2025-11-26 13:37:05,689 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 08:37:27] 2025-11-26 13:37:05,689 | INFO     | [monitor] control thread has ended
[2025-11-26 08:37:27] 2025-11-26 13:37:06,186 [wrapper] ==== pilot stdout END ====
[2025-11-26 08:37:27] 2025-11-26 13:37:06,205 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 08:37:27] 2025-11-26 13:37:06,236 [wrapper] pilotpid: 1280344
[2025-11-26 08:37:27] 2025-11-26 13:37:06,260 [wrapper] Pilot exit status: 0
[2025-11-26 08:37:27] 2025-11-26 13:37:06,397 [wrapper] pandaids: 6895356797
[2025-11-26 08:37:27] 2025-11-26 13:37:06,724 [wrapper] cleanup supervisor_pilot 3138459 1280345
[2025-11-26 08:37:27] 2025-11-26 13:37:06,736 [wrapper] Test setup, not cleaning
[2025-11-26 08:37:27] 2025-11-26 13:37:06,754 [wrapper] apfmon messages muted
[2025-11-26 08:37:27] 2025-11-26 13:37:06,812 [wrapper] ==== wrapper stdout END ====
[2025-11-26 08:37:27] 2025-11-26 13:37:06,830 [wrapper] ==== wrapper stderr END ====
[2025-11-26 08:37:27]  *** Error codes and diagnostics ***
[2025-11-26 08:37:27]     "exeErrorCode": 0,
[2025-11-26 08:37:27]     "exeErrorDiag": "",
[2025-11-26 08:37:27]     "pilotErrorCode": 0,
[2025-11-26 08:37:27]     "pilotErrorDiag": "",
[2025-11-26 08:37:27]  *** Listing of results directory ***
[2025-11-26 08:37:27] total 1348240
[2025-11-26 08:37:27] -rw-r--r--. 1 boincer umatlas    576529 Nov 23 06:12 pilot3.tar.gz
[2025-11-26 08:37:27] -rw-r--r--. 1 boincer umatlas      5112 Nov 23 06:24 queuedata.json
[2025-11-26 08:37:27] -rwx------. 1 boincer umatlas     36292 Nov 23 06:25 runpilot2-wrapper.sh
[2025-11-26 08:37:27] -rw-r--r--. 1 boincer umatlas       100 Nov 24 17:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 08:37:27] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 24 17:39 run_atlas
[2025-11-26 08:37:27] -rw-r--r--. 1 boincer umatlas       105 Nov 24 17:39 job.xml
[2025-11-26 08:37:27] -rw-r--r--. 2 boincer umatlas 410402722 Nov 24 17:39 EVNT.47483658._000704.pool.root.1
[2025-11-26 08:37:27] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 17:39 start_atlas.sh
[2025-11-26 08:37:27] drwxrwx--x. 2 boincer umatlas      4096 Nov 24 17:39 shared
[2025-11-26 08:37:27] -rw-r--r--. 2 boincer umatlas    590107 Nov 24 17:39 input.tar.gz
[2025-11-26 08:37:27] -rw-r--r--. 1 boincer umatlas         0 Nov 24 17:39 boinc_lockfile
[2025-11-26 08:37:27] -rw-r--r--. 1 boincer umatlas      2783 Nov 24 17:39 pandaJob.out
[2025-11-26 08:37:27] -rw-------. 1 boincer umatlas        57 Nov 24 17:39 setup.sh.local
[2025-11-26 08:37:27] -rw-------. 1 boincer umatlas    991801 Nov 24 17:40 agis_schedconf.cvmfs.json
[2025-11-26 08:37:27] drwx------. 5 boincer umatlas      4096 Nov 24 17:40 pilot3
[2025-11-26 08:37:27] -rw-r--r--. 1 boincer umatlas       533 Nov 26 08:08 boinc_task_state.xml
[2025-11-26 08:37:27] -rw-r--r--. 1 boincer umatlas      6881 Nov 26 08:27 init_data.xml
[2025-11-26 08:37:27] -rw-------. 1 boincer umatlas 929883931 Nov 26 08:34 HITS.47556137._006991.pool.root.1
[2025-11-26 08:37:27] -rw-------. 1 boincer umatlas      1067 Nov 26 08:35 memory_monitor_summary.json
[2025-11-26 08:37:27] -rw-------. 1 boincer umatlas   1516240 Nov 26 08:35 agis_ddmendpoints.agis.ALL.json
[2025-11-26 08:37:27] -rw-------. 1 boincer umatlas   2908163 Nov 26 08:35 log.47556137._006991.job.log.tgz.1
[2025-11-26 08:37:27] -rw-------. 1 boincer umatlas      8634 Nov 26 08:36 heartbeat.json
[2025-11-26 08:37:27] -rw-------. 1 boincer umatlas        95 Nov 26 08:37 pilot_heartbeat.json
[2025-11-26 08:37:27] -rw-------. 1 boincer umatlas       823 Nov 26 08:37 pilotlog.txt
[2025-11-26 08:37:27] -rw-------. 1 boincer umatlas  15286097 Nov 26 08:37 log.47556137._006991.job.log.1
[2025-11-26 08:37:27] -rw-------. 1 boincer umatlas       353 Nov 26 08:37 output.list
[2025-11-26 08:37:27] -rw-r--r--. 1 boincer umatlas       620 Nov 26 08:37 runtime_log
[2025-11-26 08:37:27] -rw-------. 1 boincer umatlas  18216960 Nov 26 08:37 result.tar.gz
[2025-11-26 08:37:27] -rw-------. 1 boincer umatlas       666 Nov 26 08:37 smQMDm0ONh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmvpKKDmdFPkrm.diag
[2025-11-26 08:37:27] -rw-r--r--. 1 boincer umatlas      9354 Nov 26 08:37 runtime_log.err
[2025-11-26 08:37:27] -rw-r--r--. 1 boincer umatlas        29 Nov 26 08:37 wrapper_checkpoint.txt
[2025-11-26 08:37:27] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 08:37 boinc_mmap_file
[2025-11-26 08:37:27] -rw-r--r--. 1 boincer umatlas     21816 Nov 26 08:37 stderr.txt
[2025-11-26 08:37:27] HITS file was successfully produced:
[2025-11-26 08:37:27] -rw-------. 1 boincer umatlas 929883931 Nov 26 08:34 shared/HITS.pool.root.1
[2025-11-26 08:37:27]  *** Contents of shared directory: ***
[2025-11-26 08:37:27] total 1327272
[2025-11-26 08:37:27] -rw-r--r--. 2 boincer umatlas 410402722 Nov 24 17:39 ATLAS.root_0
[2025-11-26 08:37:27] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 17:39 start_atlas.sh
[2025-11-26 08:37:27] -rw-r--r--. 2 boincer umatlas    590107 Nov 24 17:39 input.tar.gz
[2025-11-26 08:37:27] -rw-------. 1 boincer umatlas 929883931 Nov 26 08:34 HITS.pool.root.1
[2025-11-26 08:37:27] -rw-------. 1 boincer umatlas  18216960 Nov 26 08:37 result.tar.gz
08:37:29 (1274420): run_atlas exited; CPU time 281565.575462
08:37:29 (1274420): called boinc_finish(0)

</stderr_txt>
]]>

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