Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
00:15:44 (835456): wrapper (7.7.26015): starting
00:15:44 (835456): wrapper: running run_atlas (--nthreads 12)
[2025-11-24 00:15:44] Arguments: --nthreads 12
[2025-11-24 00:15:44] Threads: 12
[2025-11-24 00:15:44] Checking for CVMFS
[2025-11-24 00:15:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 00:15:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 00:15:48] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 00:15:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 00:15:48] 2.8.1.0 835696 0 30260 153234 3 1 3656528 4096001 0 130560 0 0 0.000 1292 962 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch DIRECT 1
[2025-11-24 00:15:48] CVMFS is ok
[2025-11-24 00:15:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 00:15:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 00:15:48] Small home clusters do not require a local http proxy but it is suggested if
[2025-11-24 00:15:48] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-11-24 00:15:48] Further information can be found at the LHC@home message board.
[2025-11-24 00:15:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 00:15:48] Checking for apptainer binary...
[2025-11-24 00:15:48] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2025-11-24 00:15:48] apptainer is not installed, using version from CVMFS
[2025-11-24 00:15:48] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 00:15:49] farmville.blisteringsheep.pec
[2025-11-24 00:15:49] apptainer works
[2025-11-24 00:15:49] Set ATHENA_PROC_NUMBER=12
[2025-11-24 00:15:49] Set ATHENA_CORE_NUMBER=12
[2025-11-24 00:15:49] Starting ATLAS job with PandaID=6895351252
[2025-11-24 00:15:49] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 04:04:29]  *** The last 200 lines of the pilot log: ***
[2025-11-24 04:04:29] 2025-11-24 09:03:19,102 | INFO     | time since job start (13638s) is within the limit (172800.0s)
[2025-11-24 04:04:29] 2025-11-24 09:03:20,977 | INFO     | monitor loop #1012: job 0:6895351252 is in state 'finished'
[2025-11-24 04:04:29] 2025-11-24 09:03:20,978 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 04:04:29] 2025-11-24 09:03:21,108 | INFO     | time since job start (13640s) is within the limit (172800.0s)
[2025-11-24 04:04:29] 2025-11-24 09:03:22,942 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-24 04:04:29] 2025-11-24 09:03:22,946 | INFO     | found 24 cores (12 cores per socket, 2 sockets) HT, CPU MHz: 2448.1975208333333
[2025-11-24 04:04:29] 2025-11-24 09:03:22,950 | INFO     | using path: /var/lib/boinc/slots/8/PanDA_Pilot-6895351252/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 04:04:29] 2025-11-24 09:03:22,950 | INFO     | extracted standard info from prmon json
[2025-11-24 04:04:29] 2025-11-24 09:03:22,950 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 04:04:29] 2025-11-24 09:03:22,951 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 04:04:29] 2025-11-24 09:03:22,953 | INFO     | fitting pss+swap vs Time
[2025-11-24 04:04:29] 2025-11-24 09:03:22,953 | INFO     | sum of square deviations: 3485078712.995554
[2025-11-24 04:04:29] 2025-11-24 09:03:22,954 | INFO     | sum of deviations: 150042030943.7635
[2025-11-24 04:04:29] 2025-11-24 09:03:22,954 | INFO     | mean x: 1763968184.9955356
[2025-11-24 04:04:29] 2025-11-24 09:03:22,954 | INFO     | mean y: 3556163.7633928573
[2025-11-24 04:04:29] 2025-11-24 09:03:22,954 | INFO     | intersect: -75940028126.02194
[2025-11-24 04:04:29] 2025-11-24 09:03:22,954 | INFO     | chi2: 4.472583205519372
[2025-11-24 04:04:29] 2025-11-24 09:03:22,955 | INFO     | sum of square deviations: 3256903636.7397294
[2025-11-24 04:04:29] 2025-11-24 09:03:22,955 | INFO     | sum of deviations: 218085820294.65753
[2025-11-24 04:04:29] 2025-11-24 09:03:22,956 | INFO     | mean x: 1763968032.5068493
[2025-11-24 04:04:29] 2025-11-24 09:03:22,956 | INFO     | mean y: 3601298.228310502
[2025-11-24 04:04:29] 2025-11-24 09:03:22,956 | INFO     | intersect: -118113622374.9607
[2025-11-24 04:04:29] 2025-11-24 09:03:22,956 | INFO     | chi2: 2.0678887752107933
[2025-11-24 04:04:29] 2025-11-24 09:03:22,956 | INFO     | current chi2=2.0678887752107933 (change=53.76522514642268 %)
[2025-11-24 04:04:29] 2025-11-24 09:03:22,956 | INFO     | sum of square deviations: 3038874354.9953437
[2025-11-24 04:04:29] 2025-11-24 09:03:22,957 | INFO     | sum of deviations: 208472422082.1823
[2025-11-24 04:04:29] 2025-11-24 09:03:22,957 | INFO     | mean x: 1763967880.004673
[2025-11-24 04:04:29] 2025-11-24 09:03:22,957 | INFO     | mean y: 3594574.8177570095
[2025-11-24 04:04:29] 2025-11-24 09:03:22,957 | INFO     | intersect: -121007876602.0845
[2025-11-24 04:04:29] 2025-11-24 09:03:22,957 | INFO     | chi2: 2.0647396850358275
[2025-11-24 04:04:29] 2025-11-24 09:03:22,957 | INFO     | current chi2=2.0647396850358275 (change=0.15228527823720972 %)
[2025-11-24 04:04:29] 2025-11-24 09:03:22,957 | INFO     | right removable region: 213
[2025-11-24 04:04:29] 2025-11-24 09:03:22,958 | INFO     | sum of square deviations: 3256849468.748865
[2025-11-24 04:04:29] 2025-11-24 09:03:22,958 | INFO     | sum of deviations: 81360026398.64378
[2025-11-24 04:04:29] 2025-11-24 09:03:22,958 | INFO     | mean x: 1763968337.502283
[2025-11-24 04:04:29] 2025-11-24 09:03:22,958 | INFO     | mean y: 3601754.712328767
[2025-11-24 04:04:29] 2025-11-24 09:03:22,959 | INFO     | intersect: -44062454070.91665
[2025-11-24 04:04:29] 2025-11-24 09:03:22,959 | INFO     | chi2: 2.5362684290860678
[2025-11-24 04:04:29] 2025-11-24 09:03:22,959 | INFO     | current chi2=2.5362684290860678 (change=43.2929850034719 %)
[2025-11-24 04:04:29] 2025-11-24 09:03:22,959 | INFO     | sum of square deviations: 3038846904.9953437
[2025-11-24 04:04:29] 2025-11-24 09:03:22,960 | INFO     | sum of deviations: 65243515904.747665
[2025-11-24 04:04:29] 2025-11-24 09:03:22,960 | INFO     | mean x: 1763968489.995327
[2025-11-24 04:04:29] 2025-11-24 09:03:22,960 | INFO     | mean y: 3613003.7476635515
[2025-11-24 04:04:29] 2025-11-24 09:03:22,960 | INFO     | intersect: -37868484482.736336
[2025-11-24 04:04:29] 2025-11-24 09:03:22,960 | INFO     | chi2: 2.5061657155486174
[2025-11-24 04:04:29] 2025-11-24 09:03:22,960 | INFO     | current chi2=2.5061657155486174 (change=1.1868898887921606 %)
[2025-11-24 04:04:29] 2025-11-24 09:03:22,960 | INFO     | left removable region: 20
[2025-11-24 04:04:29] 2025-11-24 09:03:22,960 | INFO     | sum of square deviations: 2229156720.2486987
[2025-11-24 04:04:29] 2025-11-24 09:03:22,961 | INFO     | sum of deviations: 97010447333.80309
[2025-11-24 04:04:29] 2025-11-24 09:03:22,961 | INFO     | mean x: 1763968459.5025907
[2025-11-24 04:04:29] 2025-11-24 09:03:22,961 | INFO     | mean y: 3677081.3937823833
[2025-11-24 04:04:29] 2025-11-24 09:03:22,961 | INFO     | intersect: -76762289072.8272
[2025-11-24 04:04:29] 2025-11-24 09:03:22,961 | INFO     | chi2: 0.02935786549351831
[2025-11-24 04:04:29] 2025-11-24 09:03:22,962 | INFO     | current memory leak: 43.52 B/s (using 193 data points, chi2=0.03)
[2025-11-24 04:04:29] 2025-11-24 09:03:22,962 | INFO     | could have reported an average CPU frequency of 2753 MHz (11 samples)
[2025-11-24 04:04:29] 2025-11-24 09:03:22,962 | INFO     | ..............................
[2025-11-24 04:04:29] 2025-11-24 09:03:22,962 | INFO     | . Timing measurements:
[2025-11-24 04:04:29] 2025-11-24 09:03:22,962 | INFO     | . get job = 0 s
[2025-11-24 04:04:29] 2025-11-24 09:03:22,962 | INFO     | . initial setup = 2 s
[2025-11-24 04:04:29] 2025-11-24 09:03:22,962 | INFO     | . payload setup = 4 s
[2025-11-24 04:04:29] 2025-11-24 09:03:22,962 | INFO     | . stage-in = 0 s
[2025-11-24 04:04:29] 2025-11-24 09:03:22,962 | INFO     | . payload execution = 13607 s
[2025-11-24 04:04:29] 2025-11-24 09:03:22,962 | INFO     | . stage-out = 3 s
[2025-11-24 04:04:29] 2025-11-24 09:03:22,962 | INFO     | . log creation = 0 s
[2025-11-24 04:04:29] 2025-11-24 09:03:22,963 | INFO     | ..............................
[2025-11-24 04:04:29] 2025-11-24 09:03:23,082 | INFO     | 
[2025-11-24 04:04:29] 2025-11-24 09:03:23,082 | INFO     | job summary report
[2025-11-24 04:04:29] 2025-11-24 09:03:23,083 | INFO     | --------------------------------------------------
[2025-11-24 04:04:29] 2025-11-24 09:03:23,083 | INFO     | PanDA job id: 6895351252
[2025-11-24 04:04:29] 2025-11-24 09:03:23,083 | INFO     | task id: 47556137
[2025-11-24 04:04:29] 2025-11-24 09:03:23,083 | INFO     | errors: (none)
[2025-11-24 04:04:29] 2025-11-24 09:03:23,083 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 04:04:29] 2025-11-24 09:03:23,083 | INFO     | pilot state: finished 
[2025-11-24 04:04:29] 2025-11-24 09:03:23,083 | INFO     | transexitcode: 0
[2025-11-24 04:04:29] 2025-11-24 09:03:23,083 | INFO     | exeerrorcode: 0
[2025-11-24 04:04:29] 2025-11-24 09:03:23,083 | INFO     | exeerrordiag: 
[2025-11-24 04:04:29] 2025-11-24 09:03:23,083 | INFO     | exitcode: 0
[2025-11-24 04:04:29] 2025-11-24 09:03:23,084 | INFO     | exitmsg: OK
[2025-11-24 04:04:29] 2025-11-24 09:03:23,084 | INFO     | cpuconsumptiontime: 159551 s
[2025-11-24 04:04:29] 2025-11-24 09:03:23,084 | INFO     | nevents: 1000
[2025-11-24 04:04:29] 2025-11-24 09:03:23,084 | INFO     | neventsw: 0
[2025-11-24 04:04:29] 2025-11-24 09:03:23,084 | INFO     | pid: 847368
[2025-11-24 04:04:29] 2025-11-24 09:03:23,084 | INFO     | pgrp: 847368
[2025-11-24 04:04:29] 2025-11-24 09:03:23,084 | INFO     | corecount: 12
[2025-11-24 04:04:29] 2025-11-24 09:03:23,084 | INFO     | event service: False
[2025-11-24 04:04:29] 2025-11-24 09:03:23,084 | INFO     | sizes: {0: 2298755, 3: 2299017, 11: 2299045, 13615: 2330286, 13616: 2330285, 13619: 2339519, 13628: 2339709}
[2025-11-24 04:04:29] 2025-11-24 09:03:23,084 | INFO     | --------------------------------------------------
[2025-11-24 04:04:29] 2025-11-24 09:03:23,085 | INFO     | 
[2025-11-24 04:04:29] 2025-11-24 09:03:23,085 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2025-11-24 04:04:29] 2025-11-24 09:03:23,099 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 04:04:29] 2025-11-24 09:03:23,099 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 04:04:29] 2025-11-24 09:03:23,099 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 04:04:29] 2025-11-24 09:03:23,099 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 04:04:29] 2025-11-24 09:03:23,099 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 04:04:29] 2025-11-24 09:03:23,099 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 04:04:29] 2025-11-24 09:03:23,099 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 04:04:29] 2025-11-24 09:03:23,100 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 04:04:29] 2025-11-24 09:03:23,100 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 04:04:29] 2025-11-24 09:03:23,100 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 04:04:29] 2025-11-24 09:03:23,100 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 04:04:29] 2025-11-24 09:03:23,100 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 04:04:29] 2025-11-24 09:03:23,100 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 04:04:29] 2025-11-24 09:03:23,100 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 04:04:29] 2025-11-24 09:03:23,100 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 04:04:29] 2025-11-24 09:03:23,100 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 04:04:29] 2025-11-24 09:03:23,100 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 04:04:29] 2025-11-24 09:03:23,100 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 04:04:29] 2025-11-24 09:03:23,100 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 04:04:29] 2025-11-24 09:03:23,100 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 04:04:29] 2025-11-24 09:03:23,100 | INFO     | job 6895351252 has completed (purged errors)
[2025-11-24 04:04:29] 2025-11-24 09:03:23,101 | INFO     | overall cleanup function is called
[2025-11-24 04:04:29] 2025-11-24 09:03:24,112 | INFO     | --- collectZombieJob: --- 10, [847368]
[2025-11-24 04:04:29] 2025-11-24 09:03:24,113 | INFO     | zombie collector waiting for pid 847368
[2025-11-24 04:04:29] 2025-11-24 09:03:24,113 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 04:04:29] 2025-11-24 09:03:24,113 | INFO     | collected zombie processes
[2025-11-24 04:04:29] 2025-11-24 09:03:24,113 | INFO     | will attempt to kill all subprocesses of pid=847368
[2025-11-24 04:04:29] 2025-11-24 09:03:24,249 | INFO     | process IDs to be killed: [847368] (in reverse order)
[2025-11-24 04:04:29] 2025-11-24 09:03:24,291 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 04:04:29] 2025-11-24 09:03:24,291 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 04:04:29] 2025-11-24 09:03:24,295 | INFO     | did not find any defunct processes belonging to 847368
[2025-11-24 04:04:29] 2025-11-24 09:03:24,298 | INFO     | did not find any defunct processes belonging to 847368
[2025-11-24 04:04:29] 2025-11-24 09:03:24,298 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 04:04:29] 2025-11-24 09:03:24,298 | INFO     | ready for new job
[2025-11-24 04:04:29] 2025-11-24 09:03:24,299 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 04:04:29] 2025-11-24 09:03:24,300 | INFO     | ***************************************
[2025-11-24 04:04:29] 2025-11-24 09:03:24,300 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 04:04:29] 2025-11-24 09:03:24,300 | INFO     | ***************************************
[2025-11-24 04:04:29] 2025-11-24 09:03:24,300 | INFO     | 
[2025-11-24 04:04:29] 2025-11-24 09:03:24,302 | INFO     | architecture information:
[2025-11-24 04:04:29] 2025-11-24 09:03:24,302 | INFO     | executing command: cat /etc/os-release
[2025-11-24 04:04:29] 2025-11-24 09:03:24,312 | INFO     | cat /etc/os-release:
[2025-11-24 04:04:29] NAME="CentOS Linux"
[2025-11-24 04:04:29] VERSION="7 (Core)"
[2025-11-24 04:04:29] ID="centos"
[2025-11-24 04:04:29] ID_LIKE="rhel fedora"
[2025-11-24 04:04:29] VERSION_ID="7"
[2025-11-24 04:04:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 04:04:29] ANSI_COLOR="0;31"
[2025-11-24 04:04:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 04:04:29] HOME_URL="https://www.centos.org/"
[2025-11-24 04:04:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 04:04:29] 
[2025-11-24 04:04:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 04:04:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 04:04:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 04:04:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 04:04:29] 
[2025-11-24 04:04:29] 2025-11-24 09:03:24,312 | INFO     | ***************************************
[2025-11-24 04:04:29] 2025-11-24 09:03:24,815 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2025-11-24 04:04:29] 2025-11-24 09:03:24,824 | INFO     | sufficient remaining disk space (341822144512 B)
[2025-11-24 04:04:29] 2025-11-24 09:03:24,825 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 04:04:29] 2025-11-24 09:03:24,825 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 04:04:29] 2025-11-24 09:03:24,825 | INFO     | update_server=False
[2025-11-24 04:04:29] 2025-11-24 09:03:24,825 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 04:04:29] 2025-11-24 09:03:24,825 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 04:04:29] 2025-11-24 09:03:24,825 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 04:04:29] 2025-11-24 09:03:24,825 | INFO     | aborting loop
[2025-11-24 04:04:29] 2025-11-24 09:03:24,960 | INFO     | all data control threads have been joined
[2025-11-24 04:04:29] 2025-11-24 09:03:24,980 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 04:04:29] 2025-11-24 09:03:25,026 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 04:04:29] 2025-11-24 09:03:25,484 | INFO     | all payload control threads have been joined
[2025-11-24 04:04:29] 2025-11-24 09:03:25,666 | INFO     | all job control threads have been joined
[2025-11-24 04:04:29] 2025-11-24 09:03:25,830 | INFO     | [job] retrieve thread has finished
[2025-11-24 04:04:29] 2025-11-24 09:03:25,830 | INFO     | [job] queue monitor thread has finished
[2025-11-24 04:04:29] 2025-11-24 09:03:25,831 | INFO     | [job] job monitor thread has finished
[2025-11-24 04:04:29] 2025-11-24 09:03:25,965 | INFO     | [data] control thread has finished
[2025-11-24 04:04:29] 2025-11-24 09:03:26,056 | INFO     | [payload] validate_post thread has finished
[2025-11-24 04:04:29] 2025-11-24 09:03:26,069 | INFO     | [job] validate thread has finished
[2025-11-24 04:04:29] 2025-11-24 09:03:26,104 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 04:04:29] 2025-11-24 09:03:26,170 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 04:04:29] 2025-11-24 09:03:26,361 | INFO     | [payload] failed_post thread has finished
[2025-11-24 04:04:29] 2025-11-24 09:03:26,490 | INFO     | [payload] control thread has finished
[2025-11-24 04:04:29] 2025-11-24 09:03:26,606 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 04:04:29] 2025-11-24 09:03:26,659 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 04:04:29] 2025-11-24 09:03:26,672 | INFO     | [job] control thread has finished
[2025-11-24 04:04:29] 2025-11-24 09:03:26,986 | INFO     | [data] copytool_out thread has finished
[2025-11-24 04:04:29] 2025-11-24 09:03:27,129 | INFO     | [data] copytool_in thread has finished
[2025-11-24 04:04:29] 2025-11-24 09:03:29,032 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 04:04:29] 2025-11-24 09:03:54,349 | INFO     | PID=840167 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-24 04:04:29] 2025-11-24 09:03:54,349 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 04:04:29] 2025-11-24 09:03:54,349 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 04:04:29] 2025-11-24 09:03:54,349 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 04:04:29] 2025-11-24 09:04:22,784 | INFO     | [monitor] cgroup control has ended
[2025-11-24 04:04:29] 2025-11-24 09:04:24,380 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140333197166400)>', '<ExcThread(monitor, started 140332645721856)>']
[2025-11-24 04:04:29] 2025-11-24 09:04:24,490 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 04:04:29] 2025-11-24 09:04:24,491 | INFO     | [monitor] control thread has ended
[2025-11-24 04:04:29] 2025-11-24 09:04:29,405 | INFO     | all workflow threads have been joined
[2025-11-24 04:04:29] 2025-11-24 09:04:29,406 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 04:04:29] 2025-11-24 09:04:29,406 | INFO     | traces error code: 0
[2025-11-24 04:04:29] 2025-11-24 09:04:29,406 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 04:04:29] 2025-11-24 09:04:29,477 [wrapper] ==== pilot stdout END ====
[2025-11-24 04:04:29] 2025-11-24 09:04:29,479 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 04:04:29] 2025-11-24 09:04:29,480 [wrapper] pilotpid: 840167
[2025-11-24 04:04:29] 2025-11-24 09:04:29,482 [wrapper] Pilot exit status: 0
[2025-11-24 04:04:29] 2025-11-24 09:04:29,487 [wrapper] pandaids: 6895351252
[2025-11-24 04:04:29] 2025-11-24 09:04:29,513 [wrapper] cleanup supervisor_pilot 1147597 840168
[2025-11-24 04:04:29] 2025-11-24 09:04:29,515 [wrapper] Test setup, not cleaning
[2025-11-24 04:04:29] 2025-11-24 09:04:29,516 [wrapper] apfmon messages muted
[2025-11-24 04:04:29] 2025-11-24 09:04:29,518 [wrapper] ==== wrapper stdout END ====
[2025-11-24 04:04:29] 2025-11-24 09:04:29,519 [wrapper] ==== wrapper stderr END ====
[2025-11-24 04:04:29]  *** Error codes and diagnostics ***
[2025-11-24 04:04:29]     "exeErrorCode": 0,
[2025-11-24 04:04:29]     "exeErrorDiag": "",
[2025-11-24 04:04:29]     "pilotErrorCode": 0,
[2025-11-24 04:04:29]     "pilotErrorDiag": "",
[2025-11-24 04:04:29]  *** Listing of results directory ***
[2025-11-24 04:04:29] total 1296416
[2025-11-24 04:04:29] -rw-r--r-- 1 boinc boinc    576529 Nov 22 18:50 pilot3.tar.gz
[2025-11-24 04:04:29] -rwx------ 1 boinc boinc     36292 Nov 22 18:53 runpilot2-wrapper.sh
[2025-11-24 04:04:29] -rw-r--r-- 1 boinc boinc      5112 Nov 22 18:53 queuedata.json
[2025-11-24 04:04:29] -rw-r--r-- 1 boinc boinc       100 Nov 24 00:15 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 04:04:29] -rwxr-xr-x 1 boinc boinc      7986 Nov 24 00:15 run_atlas
[2025-11-24 04:04:29] -rw-r--r-- 1 boinc boinc       105 Nov 24 00:15 job.xml
[2025-11-24 04:04:29] -rw-r--r-- 2 boinc boinc 408128205 Nov 24 00:15 EVNT.47483658._000543.pool.root.1
[2025-11-24 04:04:29] -rw-r--r-- 2 boinc boinc    590097 Nov 24 00:15 input.tar.gz
[2025-11-24 04:04:29] -rw-r--r-- 2 boinc boinc     15847 Nov 24 00:15 start_atlas.sh
[2025-11-24 04:04:29] drwxrwx--x 1 boinc boinc        76 Nov 24 00:15 shared
[2025-11-24 04:04:29] -rw-r--r-- 1 boinc boinc         0 Nov 24 00:15 boinc_setup_complete
[2025-11-24 04:04:29] -rw-r--r-- 1 boinc boinc      9256 Nov 24 00:15 init_data.xml
[2025-11-24 04:04:29] -rw-r--r-- 1 boinc boinc         0 Nov 24 00:15 boinc_lockfile
[2025-11-24 04:04:29] -rw-r--r-- 1 boinc boinc      2784 Nov 24 00:15 pandaJob.out
[2025-11-24 04:04:29] -rw------- 1 boinc boinc    989786 Nov 24 00:15 agis_schedconf.cvmfs.json
[2025-11-24 04:04:29] drwx------ 1 boinc boinc       414 Nov 24 00:16 pilot3
[2025-11-24 04:04:29] -rw-r--r-- 1 boinc boinc       532 Nov 24 03:59 boinc_task_state.xml
[2025-11-24 04:04:29] -rw------- 1 boinc boinc 907627597 Nov 24 04:02 HITS.47556137._005390.pool.root.1
[2025-11-24 04:04:29] -rw------- 1 boinc boinc      1051 Nov 24 04:03 memory_monitor_summary.json
[2025-11-24 04:04:29] -rw------- 1 boinc boinc   1526164 Nov 24 04:03 agis_ddmendpoints.agis.ALL.json
[2025-11-24 04:04:29] -rw------- 1 boinc boinc   2019354 Nov 24 04:03 log.47556137._005390.job.log.tgz.1
[2025-11-24 04:04:29] -rw------- 1 boinc boinc      8637 Nov 24 04:03 heartbeat.json
[2025-11-24 04:04:29] -rw------- 1 boinc boinc        95 Nov 24 04:03 pilot_heartbeat.json
[2025-11-24 04:04:29] -rw-r--r-- 1 boinc boinc      8192 Nov 24 04:03 boinc_mmap_file
[2025-11-24 04:04:29] -rw-r--r-- 1 boinc boinc        29 Nov 24 04:04 wrapper_checkpoint.txt
[2025-11-24 04:04:29] -rw------- 1 boinc boinc      4748 Nov 24 04:04 pilotlog.txt
[2025-11-24 04:04:29] -rw------- 1 boinc boinc   1914426 Nov 24 04:04 log.47556137._005390.job.log.1
[2025-11-24 04:04:29] -rw------- 1 boinc boinc       353 Nov 24 04:04 output.list
[2025-11-24 04:04:29] -rw-r--r-- 1 boinc boinc       620 Nov 24 04:04 runtime_log
[2025-11-24 04:04:29] -rw------- 1 boinc boinc   3952640 Nov 24 04:04 result.tar.gz
[2025-11-24 04:04:29] -rw------- 1 boinc boinc       679 Nov 24 04:04 sGOKDmEbCh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmxSKKDmwCstjn.diag
[2025-11-24 04:04:29] -rw-r--r-- 1 boinc boinc      8905 Nov 24 04:04 runtime_log.err
[2025-11-24 04:04:29] -rw-r--r-- 1 boinc boinc     21639 Nov 24 04:04 stderr.txt
[2025-11-24 04:04:29] HITS file was successfully produced:
[2025-11-24 04:04:29] -rw------- 1 boinc boinc 907627597 Nov 24 04:02 shared/HITS.pool.root.1
[2025-11-24 04:04:29]  *** Contents of shared directory: ***
[2025-11-24 04:04:29] total 1289376
[2025-11-24 04:04:29] -rw-r--r-- 2 boinc boinc 408128205 Nov 24 00:15 ATLAS.root_0
[2025-11-24 04:04:29] -rw-r--r-- 2 boinc boinc    590097 Nov 24 00:15 input.tar.gz
[2025-11-24 04:04:29] -rw-r--r-- 2 boinc boinc     15847 Nov 24 00:15 start_atlas.sh
[2025-11-24 04:04:29] -rw------- 1 boinc boinc 907627597 Nov 24 04:02 HITS.pool.root.1
[2025-11-24 04:04:29] -rw------- 1 boinc boinc   3952640 Nov 24 04:04 result.tar.gz
04:04:31 (835456): run_atlas exited; CPU time 159563.391404
04:04:31 (835456): called boinc_finish(0)

</stderr_txt>
]]>

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