Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:03:16 (1743744): wrapper (7.7.26015): starting
00:03:16 (1743744): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 00:03:16] Arguments: --nthreads 8
[2025-11-25 00:03:16] Threads: 8
[2025-11-25 00:03:16] Checking for CVMFS
[2025-11-25 00:03:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 00:03:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 00:03:18] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 00:03:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 00:03:19] 2.13.3.0 11334 28165 342704 153270 3 407 24876548 32935937 35828 16776704 0 119193162 99.500 161302145 40930 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 00:03:19] CVMFS is ok
[2025-11-25 00:03:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 00:03:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 00:03:19] Further information can be found at the LHC@home message board.
[2025-11-25 00:03:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 00:03:19] Checking for apptainer binary...
[2025-11-25 00:03:19] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 00:03:19] Running /usr/bin/apptainer --version
[2025-11-25 00:03:19] apptainer version 1.4.4-1.el9
[2025-11-25 00:03:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 00:03:20] c6-4-5-2.aglt2.org
[2025-11-25 00:03:20] apptainer works
[2025-11-25 00:03:20] Set ATHENA_PROC_NUMBER=8
[2025-11-25 00:03:20] Set ATHENA_CORE_NUMBER=8
[2025-11-25 00:03:20] Starting ATLAS job with PandaID=6895356272
[2025-11-25 00:03:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 22:10:09]  *** The last 200 lines of the pilot log: ***
[2025-11-25 22:10:09] 2025-11-26 03:09:27,495 | INFO     | time since job start (79492s) is within the limit (172800.0s)
[2025-11-25 22:10:09] 2025-11-26 03:09:29,238 | INFO     | monitor loop #4786: job 0:6895356272 is in state 'finished'
[2025-11-25 22:10:09] 2025-11-26 03:09:29,238 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 22:10:09] 2025-11-26 03:09:29,536 | INFO     | time since job start (79494s) is within the limit (172800.0s)
[2025-11-25 22:10:09] 2025-11-26 03:09:31,542 | INFO     | time since job start (79496s) is within the limit (172800.0s)
[2025-11-25 22:10:09] 2025-11-26 03:09:31,743 | INFO     | monitor loop #4787: job 0:6895356272 is in state 'finished'
[2025-11-25 22:10:09] 2025-11-26 03:09:31,743 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 22:10:09] 2025-11-26 03:09:33,557 | INFO     | time since job start (79498s) is within the limit (172800.0s)
[2025-11-25 22:10:09] 2025-11-26 03:09:34,261 | INFO     | monitor loop #4788: job 0:6895356272 is in state 'finished'
[2025-11-25 22:10:09] 2025-11-26 03:09:34,261 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 22:10:09] 2025-11-26 03:09:34,317 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-25 22:10:09] 2025-11-26 03:09:34,326 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 3108.360234375001
[2025-11-25 22:10:09] 2025-11-26 03:09:34,337 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6895356272/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 22:10:09] 2025-11-26 03:09:34,338 | INFO     | extracted standard info from prmon json
[2025-11-25 22:10:09] 2025-11-26 03:09:34,338 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 22:10:09] 2025-11-26 03:09:34,338 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 22:10:09] 2025-11-26 03:09:34,358 | INFO     | fitting pss+swap vs Time
[2025-11-25 22:10:09] 2025-11-26 03:09:34,360 | INFO     | sum of square deviations: 681104609325.7389
[2025-11-25 22:10:09] 2025-11-26 03:09:34,413 | INFO     | sum of deviations: 6060740696123.353
[2025-11-25 22:10:09] 2025-11-26 03:09:34,413 | INFO     | mean x: 1764086864.753077
[2025-11-25 22:10:09] 2025-11-26 03:09:34,413 | INFO     | mean y: 2818966.786153846
[2025-11-25 22:10:09] 2025-11-26 03:09:34,434 | INFO     | intersect: -15694730141.404251
[2025-11-25 22:10:09] 2025-11-26 03:09:34,435 | INFO     | chi2: 16.231529777844024
[2025-11-25 22:10:09] 2025-11-26 03:09:34,437 | INFO     | sum of square deviations: 673275482532.6206
[2025-11-25 22:10:09] 2025-11-26 03:09:34,591 | INFO     | sum of deviations: 6484819615610.984
[2025-11-25 22:10:09] 2025-11-26 03:09:34,591 | INFO     | mean x: 1764086712.2656372
[2025-11-25 22:10:09] 2025-11-26 03:09:34,592 | INFO     | mean y: 2827227.284942085
[2025-11-25 22:10:09] 2025-11-26 03:09:34,592 | INFO     | intersect: -16988410998.569551
[2025-11-25 22:10:09] 2025-11-26 03:09:34,609 | INFO     | chi2: 13.027805988701095
[2025-11-25 22:10:09] 2025-11-26 03:09:34,610 | INFO     | current chi2=13.027805988701095 (change=19.73765771305179 %)
[2025-11-25 22:10:09] 2025-11-26 03:09:34,610 | INFO     | right removable region: 1294
[2025-11-25 22:10:09] 2025-11-26 03:09:34,611 | INFO     | sum of square deviations: 673272902842.6215
[2025-11-25 22:10:09] 2025-11-26 03:09:34,756 | INFO     | sum of deviations: 5538579873773.563
[2025-11-25 22:10:09] 2025-11-26 03:09:34,756 | INFO     | mean x: 1764087017.2656372
[2025-11-25 22:10:09] 2025-11-26 03:09:34,756 | INFO     | mean y: 2829133.983783784
[2025-11-25 22:10:09] 2025-11-26 03:09:34,757 | INFO     | intersect: -14509171583.942884
[2025-11-25 22:10:09] 2025-11-26 03:09:34,758 | INFO     | chi2: 11.91562444455348
[2025-11-25 22:10:09] 2025-11-26 03:09:34,758 | INFO     | current chi2=11.91562444455348 (change=26.589639993032193 %)
[2025-11-25 22:10:09] 2025-11-26 03:09:34,760 | INFO     | sum of square deviations: 665501430046.5933
[2025-11-25 22:10:09] 2025-11-26 03:09:34,849 | INFO     | sum of deviations: 5106638214444.177
[2025-11-25 22:10:09] 2025-11-26 03:09:34,850 | INFO     | mean x: 1764087169.7782946
[2025-11-25 22:10:09] 2025-11-26 03:09:34,850 | INFO     | mean y: 2837610.57751938
[2025-11-25 22:10:09] 2025-11-26 03:09:34,850 | INFO     | intersect: -13533654646.35092
[2025-11-25 22:10:09] 2025-11-26 03:09:34,851 | INFO     | chi2: 9.163917210142841
[2025-11-25 22:10:09] 2025-11-26 03:09:34,851 | INFO     | current chi2=9.163917210142841 (change=23.09326923834376 %)
[2025-11-25 22:10:09] 2025-11-26 03:09:34,851 | INFO     | left removable region: 20
[2025-11-25 22:10:09] 2025-11-26 03:09:34,855 | INFO     | sum of square deviations: 641040211542.9395
[2025-11-25 22:10:09] 2025-11-26 03:09:34,902 | INFO     | sum of deviations: 5244229020448.86
[2025-11-25 22:10:09] 2025-11-26 03:09:34,902 | INFO     | mean x: 1764087291.7959185
[2025-11-25 22:10:09] 2025-11-26 03:09:34,902 | INFO     | mean y: 2855978.3571428573
[2025-11-25 22:10:09] 2025-11-26 03:09:34,902 | INFO     | intersect: -14428809311.366268
[2025-11-25 22:10:09] 2025-11-26 03:09:34,906 | INFO     | chi2: 3.8329056990289105
[2025-11-25 22:10:09] 2025-11-26 03:09:34,906 | INFO     | current memory leak: 8.18 B/s (using 1274 data points, chi2=3.83)
[2025-11-25 22:10:09] 2025-11-26 03:09:34,907 | INFO     | could have reported an average CPU frequency of 3153 MHz (47 samples)
[2025-11-25 22:10:09] 2025-11-26 03:09:34,908 | INFO     | ..............................
[2025-11-25 22:10:09] 2025-11-26 03:09:34,908 | INFO     | . Timing measurements:
[2025-11-25 22:10:09] 2025-11-26 03:09:34,908 | INFO     | . get job = 1 s
[2025-11-25 22:10:09] 2025-11-26 03:09:34,908 | INFO     | . initial setup = 4 s
[2025-11-25 22:10:09] 2025-11-26 03:09:34,908 | INFO     | . payload setup = 47 s
[2025-11-25 22:10:09] 2025-11-26 03:09:34,908 | INFO     | . stage-in = 0 s
[2025-11-25 22:10:09] 2025-11-26 03:09:34,908 | INFO     | . payload execution = 79332 s
[2025-11-25 22:10:09] 2025-11-26 03:09:34,908 | INFO     | . stage-out = 7 s
[2025-11-25 22:10:09] 2025-11-26 03:09:34,908 | INFO     | . log creation = 2 s
[2025-11-25 22:10:09] 2025-11-26 03:09:34,908 | INFO     | ..............................
[2025-11-25 22:10:09] 2025-11-26 03:09:35,008 | INFO     | 
[2025-11-25 22:10:09] 2025-11-26 03:09:35,009 | INFO     | job summary report
[2025-11-25 22:10:09] 2025-11-26 03:09:35,009 | INFO     | --------------------------------------------------
[2025-11-25 22:10:09] 2025-11-26 03:09:35,009 | INFO     | PanDA job id: 6895356272
[2025-11-25 22:10:09] 2025-11-26 03:09:35,009 | INFO     | task id: 47556137
[2025-11-25 22:10:09] 2025-11-26 03:09:35,009 | INFO     | errors: (none)
[2025-11-25 22:10:09] 2025-11-26 03:09:35,009 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 22:10:09] 2025-11-26 03:09:35,009 | INFO     | pilot state: finished 
[2025-11-25 22:10:09] 2025-11-26 03:09:35,009 | INFO     | transexitcode: 0
[2025-11-25 22:10:09] 2025-11-26 03:09:35,009 | INFO     | exeerrorcode: 0
[2025-11-25 22:10:09] 2025-11-26 03:09:35,009 | INFO     | exeerrordiag: 
[2025-11-25 22:10:09] 2025-11-26 03:09:35,009 | INFO     | exitcode: 0
[2025-11-25 22:10:09] 2025-11-26 03:09:35,009 | INFO     | exitmsg: OK
[2025-11-25 22:10:09] 2025-11-26 03:09:35,009 | INFO     | cpuconsumptiontime: 222235 s
[2025-11-25 22:10:09] 2025-11-26 03:09:35,010 | INFO     | nevents: 1000
[2025-11-25 22:10:09] 2025-11-26 03:09:35,010 | INFO     | neventsw: 0
[2025-11-25 22:10:09] 2025-11-26 03:09:35,010 | INFO     | pid: 1770117
[2025-11-25 22:10:09] 2025-11-26 03:09:35,010 | INFO     | pgrp: 1770117
[2025-11-25 22:10:09] 2025-11-26 03:09:35,010 | INFO     | corecount: 8
[2025-11-25 22:10:09] 2025-11-26 03:09:35,010 | INFO     | event service: False
[2025-11-25 22:10:09] 2025-11-26 03:09:35,010 | INFO     | sizes: {0: 2283482, 1: 2284083, 2: 2284195, 3: 2284394, 14: 2284394, 25: 2284422, 36: 2284578, 39: 2284868, 47: 2284896, 79384: 2347281, 79392: 2356616, 79415: 235
[2025-11-25 22:10:09] 2025-11-26 03:09:35,010 | INFO     | --------------------------------------------------
[2025-11-25 22:10:09] 2025-11-26 03:09:35,010 | INFO     | 
[2025-11-25 22:10:09] 2025-11-26 03:09:35,010 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-11-25 22:10:09] 2025-11-26 03:09:35,065 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 22:10:09] 2025-11-26 03:09:35,065 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 22:10:09] 2025-11-26 03:09:35,065 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 22:10:09] 2025-11-26 03:09:35,065 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 22:10:09] 2025-11-26 03:09:35,066 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 22:10:09] 2025-11-26 03:09:35,066 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 22:10:09] 2025-11-26 03:09:35,066 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 22:10:09] 2025-11-26 03:09:35,066 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 22:10:09] 2025-11-26 03:09:35,066 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 22:10:09] 2025-11-26 03:09:35,066 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 22:10:09] 2025-11-26 03:09:35,066 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 22:10:09] 2025-11-26 03:09:35,066 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 22:10:09] 2025-11-26 03:09:35,066 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 22:10:09] 2025-11-26 03:09:35,066 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 22:10:09] 2025-11-26 03:09:35,066 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 22:10:09] 2025-11-26 03:09:35,066 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 22:10:09] 2025-11-26 03:09:35,066 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 22:10:09] 2025-11-26 03:09:35,066 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 22:10:09] 2025-11-26 03:09:35,066 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 22:10:09] 2025-11-26 03:09:35,067 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 22:10:09] 2025-11-26 03:09:35,067 | INFO     | job 6895356272 has completed (purged errors)
[2025-11-25 22:10:09] 2025-11-26 03:09:35,067 | INFO     | overall cleanup function is called
[2025-11-25 22:10:09] 2025-11-26 03:09:36,109 | INFO     | --- collectZombieJob: --- 10, [1770117]
[2025-11-25 22:10:09] 2025-11-26 03:09:36,109 | INFO     | zombie collector waiting for pid 1770117
[2025-11-25 22:10:09] 2025-11-26 03:09:36,109 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 22:10:09] 2025-11-26 03:09:36,109 | INFO     | collected zombie processes
[2025-11-25 22:10:09] 2025-11-26 03:09:36,109 | INFO     | will attempt to kill all subprocesses of pid=1770117
[2025-11-25 22:10:09] 2025-11-26 03:09:36,942 | INFO     | process IDs to be killed: [1770117] (in reverse order)
[2025-11-25 22:10:09] 2025-11-26 03:09:37,240 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 22:10:09] 2025-11-26 03:09:37,240 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 22:10:09] 2025-11-26 03:09:37,287 | INFO     | did not find any defunct processes belonging to 1770117
[2025-11-25 22:10:09] 2025-11-26 03:09:37,333 | INFO     | did not find any defunct processes belonging to 1770117
[2025-11-25 22:10:09] 2025-11-26 03:09:37,347 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 22:10:09] 2025-11-26 03:09:37,347 | INFO     | ready for new job
[2025-11-25 22:10:09] 2025-11-26 03:09:37,347 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 22:10:09] 2025-11-26 03:09:37,360 | INFO     | ***************************************
[2025-11-25 22:10:09] 2025-11-26 03:09:37,360 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 22:10:09] 2025-11-26 03:09:37,360 | INFO     | ***************************************
[2025-11-25 22:10:09] 2025-11-26 03:09:37,360 | INFO     | 
[2025-11-25 22:10:09] 2025-11-26 03:09:37,369 | INFO     | architecture information:
[2025-11-25 22:10:09] 2025-11-26 03:09:37,375 | INFO     | executing command: cat /etc/os-release
[2025-11-25 22:10:09] 2025-11-26 03:09:37,411 | INFO     | cat /etc/os-release:
[2025-11-25 22:10:09] NAME="CentOS Linux"
[2025-11-25 22:10:09] VERSION="7 (Core)"
[2025-11-25 22:10:09] ID="centos"
[2025-11-25 22:10:09] ID_LIKE="rhel fedora"
[2025-11-25 22:10:09] VERSION_ID="7"
[2025-11-25 22:10:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 22:10:09] ANSI_COLOR="0;31"
[2025-11-25 22:10:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 22:10:09] HOME_URL="https://www.centos.org/"
[2025-11-25 22:10:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 22:10:09] 
[2025-11-25 22:10:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 22:10:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 22:10:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 22:10:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 22:10:09] 
[2025-11-25 22:10:09] 2025-11-26 03:09:37,411 | INFO     | ***************************************
[2025-11-25 22:10:09] 2025-11-26 03:09:37,914 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-11-25 22:10:09] 2025-11-26 03:09:37,987 | INFO     | sufficient remaining disk space (67344793600 B)
[2025-11-25 22:10:09] 2025-11-26 03:09:37,987 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 22:10:09] 2025-11-26 03:09:37,988 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 22:10:09] 2025-11-26 03:09:37,988 | INFO     | update_server=False
[2025-11-25 22:10:09] 2025-11-26 03:09:37,988 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 22:10:09] 2025-11-26 03:09:37,988 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 22:10:09] 2025-11-26 03:09:37,988 | INFO     | aborting loop
[2025-11-25 22:10:09] 2025-11-26 03:09:37,990 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 22:10:09] 2025-11-26 03:09:38,136 | INFO     | all payload control threads have been joined
[2025-11-25 22:10:09] 2025-11-26 03:09:38,269 | INFO     | all data control threads have been joined
[2025-11-25 22:10:09] 2025-11-26 03:09:38,648 | INFO     | all job control threads have been joined
[2025-11-25 22:10:09] 2025-11-26 03:09:38,994 | INFO     | [job] retrieve thread has finished
[2025-11-25 22:10:09] 2025-11-26 03:09:39,001 | INFO     | [job] job monitor thread has finished
[2025-11-25 22:10:09] 2025-11-26 03:09:39,070 | INFO     | [data] copytool_in thread has finished
[2025-11-25 22:10:09] 2025-11-26 03:09:39,142 | INFO     | [payload] control thread has finished
[2025-11-25 22:10:09] 2025-11-26 03:09:39,152 | INFO     | [payload] validate_post thread has finished
[2025-11-25 22:10:09] 2025-11-26 03:09:39,221 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 22:10:09] 2025-11-26 03:09:39,256 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 22:10:09] 2025-11-26 03:09:39,275 | INFO     | [data] control thread has finished
[2025-11-25 22:10:09] 2025-11-26 03:09:39,634 | INFO     | [payload] failed_post thread has finished
[2025-11-25 22:10:09] 2025-11-26 03:09:39,654 | INFO     | [job] control thread has finished
[2025-11-25 22:10:09] 2025-11-26 03:09:39,730 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 22:10:09] 2025-11-26 03:09:39,730 | INFO     | [job] validate thread has finished
[2025-11-25 22:10:09] 2025-11-26 03:09:40,013 | INFO     | [data] copytool_out thread has finished
[2025-11-25 22:10:09] 2025-11-26 03:09:40,035 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 22:10:09] 2025-11-26 03:09:40,076 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 22:10:09] 2025-11-26 03:09:41,042 | INFO     | [job] queue monitor thread has finished
[2025-11-25 22:10:09] 2025-11-26 03:09:41,312 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 22:10:09] 2025-11-26 03:09:45,321 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 22:10:09] 2025-11-26 03:09:58,649 | INFO     | [monitor] cgroup control has ended
[2025-11-25 22:10:09] 2025-11-26 03:09:59,028 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139778046093120)>', '<ExcThread(monitor, started 139777412159232)>']
[2025-11-25 22:10:09] 2025-11-26 03:10:04,053 | INFO     | all workflow threads have been joined
[2025-11-25 22:10:09] 2025-11-26 03:10:04,053 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 22:10:09] 2025-11-26 03:10:04,053 | INFO     | traces error code: 0
[2025-11-25 22:10:09] 2025-11-26 03:10:04,053 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 22:10:09] 2025-11-26 03:10:07,485 | INFO     | PID=1752211 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-25 22:10:09] 2025-11-26 03:10:07,485 | INFO     | .. there are 47 such processes running
[2025-11-25 22:10:09] 2025-11-26 03:10:07,485 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 22:10:09] 2025-11-26 03:10:07,486 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 22:10:09] 2025-11-26 03:10:07,486 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 22:10:09] 2025-11-26 03:10:07,486 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 22:10:09] 2025-11-26 03:10:07,486 | INFO     | [monitor] control thread has ended
[2025-11-25 22:10:09] 2025-11-26 03:10:08,022 [wrapper] ==== pilot stdout END ====
[2025-11-25 22:10:09] 2025-11-26 03:10:08,034 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 22:10:09] 2025-11-26 03:10:08,053 [wrapper] pilotpid: 1752211
[2025-11-25 22:10:09] 2025-11-26 03:10:08,073 [wrapper] Pilot exit status: 0
[2025-11-25 22:10:09] 2025-11-26 03:10:08,152 [wrapper] pandaids: 6895356272
[2025-11-25 22:10:09] 2025-11-26 03:10:08,330 [wrapper] cleanup supervisor_pilot 3786175 1752212
[2025-11-25 22:10:09] 2025-11-26 03:10:08,372 [wrapper] Test setup, not cleaning
[2025-11-25 22:10:09] 2025-11-26 03:10:08,396 [wrapper] apfmon messages muted
[2025-11-25 22:10:09] 2025-11-26 03:10:08,421 [wrapper] ==== wrapper stdout END ====
[2025-11-25 22:10:09] 2025-11-26 03:10:08,443 [wrapper] ==== wrapper stderr END ====
[2025-11-25 22:10:09]  *** Error codes and diagnostics ***
[2025-11-25 22:10:09]     "exeErrorCode": 0,
[2025-11-25 22:10:09]     "exeErrorDiag": "",
[2025-11-25 22:10:09]     "pilotErrorCode": 0,
[2025-11-25 22:10:09]     "pilotErrorDiag": "",
[2025-11-25 22:10:09]  *** Listing of results directory ***
[2025-11-25 22:10:09] total 1323556
[2025-11-25 22:10:09] -rw-r--r--. 1 boincer umatlas    576529 Nov 23 05:16 pilot3.tar.gz
[2025-11-25 22:10:09] -rwx------. 1 boincer umatlas     36292 Nov 23 05:52 runpilot2-wrapper.sh
[2025-11-25 22:10:09] -rw-r--r--. 1 boincer umatlas      5112 Nov 23 05:52 queuedata.json
[2025-11-25 22:10:09] -rw-r--r--. 1 boincer umatlas       100 Nov 25 00:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 22:10:09] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 00:03 run_atlas
[2025-11-25 22:10:09] -rw-r--r--. 1 boincer umatlas       105 Nov 25 00:03 job.xml
[2025-11-25 22:10:09] -rw-r--r--. 2 boincer umatlas 409301931 Nov 25 00:03 EVNT.47483658._000694.pool.root.1
[2025-11-25 22:10:09] -rw-r--r--. 2 boincer umatlas    590097 Nov 25 00:03 input.tar.gz
[2025-11-25 22:10:09] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 00:03 shared
[2025-11-25 22:10:09] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 00:03 start_atlas.sh
[2025-11-25 22:10:09] -rw-r--r--. 1 boincer umatlas         0 Nov 25 00:03 boinc_lockfile
[2025-11-25 22:10:09] -rw-r--r--. 1 boincer umatlas      2786 Nov 25 00:03 pandaJob.out
[2025-11-25 22:10:09] -rw-------. 1 boincer umatlas        57 Nov 25 00:03 setup.sh.local
[2025-11-25 22:10:09] -rw-------. 1 boincer umatlas    991801 Nov 25 00:04 agis_schedconf.cvmfs.json
[2025-11-25 22:10:09] drwx------. 5 boincer umatlas      4096 Nov 25 00:04 pilot3
[2025-11-25 22:10:09] -rw-r--r--. 1 boincer umatlas       532 Nov 25 21:50 boinc_task_state.xml
[2025-11-25 22:10:09] -rw-------. 1 boincer umatlas 917378598 Nov 25 22:08 HITS.47556137._006893.pool.root.1
[2025-11-25 22:10:09] -rw-------. 1 boincer umatlas      1063 Nov 25 22:09 memory_monitor_summary.json
[2025-11-25 22:10:09] -rw-------. 1 boincer umatlas   1516240 Nov 25 22:09 agis_ddmendpoints.agis.ALL.json
[2025-11-25 22:10:09] -rw-------. 1 boincer umatlas   2357499 Nov 25 22:09 log.47556137._006893.job.log.tgz.1
[2025-11-25 22:10:09] -rw-------. 1 boincer umatlas        95 Nov 25 22:09 pilot_heartbeat.json
[2025-11-25 22:10:09] -rw-r--r--. 1 boincer umatlas      6876 Nov 25 22:09 init_data.xml
[2025-11-25 22:10:09] -rw-------. 1 boincer umatlas      8623 Nov 25 22:09 heartbeat.json
[2025-11-25 22:10:09] -rw-------. 1 boincer umatlas       823 Nov 25 22:10 pilotlog.txt
[2025-11-25 22:10:09] -rw-r--r--. 1 boincer umatlas      8192 Nov 25 22:10 boinc_mmap_file
[2025-11-25 22:10:09] -rw-r--r--. 1 boincer umatlas        29 Nov 25 22:10 wrapper_checkpoint.txt
[2025-11-25 22:10:09] -rw-------. 1 boincer umatlas   9999530 Nov 25 22:10 log.47556137._006893.job.log.1
[2025-11-25 22:10:09] -rw-------. 1 boincer umatlas       353 Nov 25 22:10 output.list
[2025-11-25 22:10:09] -rw-r--r--. 1 boincer umatlas       620 Nov 25 22:10 runtime_log
[2025-11-25 22:10:09] -rw-------. 1 boincer umatlas  12380160 Nov 25 22:10 result.tar.gz
[2025-11-25 22:10:09] -rw-r--r--. 1 boincer umatlas      9343 Nov 25 22:10 runtime_log.err
[2025-11-25 22:10:09] -rw-------. 1 boincer umatlas       660 Nov 25 22:10 bMdNDmHtMh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmbVIKDmrx33Fo.diag
[2025-11-25 22:10:09] -rw-r--r--. 1 boincer umatlas     21597 Nov 25 22:10 stderr.txt
[2025-11-25 22:10:09] HITS file was successfully produced:
[2025-11-25 22:10:09] -rw-------. 1 boincer umatlas 917378598 Nov 25 22:08 shared/HITS.pool.root.1
[2025-11-25 22:10:09]  *** Contents of shared directory: ***
[2025-11-25 22:10:09] total 1308288
[2025-11-25 22:10:09] -rw-r--r--. 2 boincer umatlas 409301931 Nov 25 00:03 ATLAS.root_0
[2025-11-25 22:10:09] -rw-r--r--. 2 boincer umatlas    590097 Nov 25 00:03 input.tar.gz
[2025-11-25 22:10:09] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 00:03 start_atlas.sh
[2025-11-25 22:10:09] -rw-------. 1 boincer umatlas 917378598 Nov 25 22:08 HITS.pool.root.1
[2025-11-25 22:10:09] -rw-------. 1 boincer umatlas  12380160 Nov 25 22:10 result.tar.gz
22:10:10 (1743744): run_atlas exited; CPU time 224483.640078
22:10:10 (1743744): called boinc_finish(0)

</stderr_txt>
]]>

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