Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:14:55 (892824): wrapper (7.7.26015): starting
00:14:55 (892824): wrapper: running run_atlas (--nthreads 11)
[2025-11-24 00:14:55] Arguments: --nthreads 11
[2025-11-24 00:14:55] Threads: 11
[2025-11-24 00:14:55] Checking for CVMFS
[2025-11-24 00:14:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 00:14:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 00:14:56] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 00:14:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 00:14:58] 2.13.3.0 8980 26739 338616 153234 0 335 18535143 32935937 24594 16776704 0 148160201 99.769 85821364 32812 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-24 00:14:58] CVMFS is ok
[2025-11-24 00:14:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 00:14:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 00:14:58] Further information can be found at the LHC@home message board.
[2025-11-24 00:14:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 00:14:58] Checking for apptainer binary...
[2025-11-24 00:14:58] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 00:14:58] Running /usr/bin/apptainer --version
[2025-11-24 00:14:58] apptainer version 1.4.4-1.el9
[2025-11-24 00:14:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 00:14:59] c-5-4.aglt2.org
[2025-11-24 00:14:59] apptainer works
[2025-11-24 00:14:59] Set ATHENA_PROC_NUMBER=11
[2025-11-24 00:14:59] Set ATHENA_CORE_NUMBER=11
[2025-11-24 00:14:59] Starting ATLAS job with PandaID=6895350467
[2025-11-24 00:14:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
13:40:06 (892824): BOINC client no longer exists - exiting
13:40:06 (892824): timer handler: client dead, exiting
13:45:42 (3403083): wrapper (7.7.26015): starting
13:45:42 (3403083): wrapper: running run_atlas (--nthreads 9)
[2025-11-24 13:45:42] Arguments: --nthreads 9
[2025-11-24 13:45:42] Threads: 9
[2025-11-24 13:45:42] This job has been restarted, cleaning up previous attempt
[2025-11-24 13:45:42] Checking for CVMFS
[2025-11-24 13:45:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 13:45:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 13:45:42] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 13:45:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 13:45:42] 2.13.3.0 8980 27550 318872 153255 2 211 29677620 32935936 23732 16776704 0 150968369 99.766 88954013 32767 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-24 13:45:42] CVMFS is ok
[2025-11-24 13:45:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 13:45:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 13:45:42] Further information can be found at the LHC@home message board.
[2025-11-24 13:45:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 13:45:42] Checking for apptainer binary...
[2025-11-24 13:45:42] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 13:45:42] Running /usr/bin/apptainer --version
[2025-11-24 13:45:42] apptainer version 1.4.4-1.el9
[2025-11-24 13:45:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 13:45:43] c-5-4.aglt2.org
[2025-11-24 13:45:43] apptainer works
[2025-11-24 13:45:43] Set ATHENA_PROC_NUMBER=9
[2025-11-24 13:45:43] Set ATHENA_CORE_NUMBER=9
[2025-11-24 13:45:43] Starting ATLAS job with PandaID=6895350467
[2025-11-24 13:45:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
00:20:15 (3403083): BOINC client no longer exists - exiting
00:20:15 (3403083): timer handler: client dead, exiting
00:30:39 (1184753): wrapper (7.7.26015): starting
00:30:39 (1184753): wrapper: running run_atlas (--nthreads 9)
[2025-11-25 00:30:39] Arguments: --nthreads 9
[2025-11-25 00:30:39] Threads: 9
[2025-11-25 00:30:39] This job has been restarted, cleaning up previous attempt
[2025-11-25 00:30:39] Checking for CVMFS
[2025-11-25 00:30:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 00:30:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 00:30:39] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 00:30:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 00:30:39] 2.13.3.0 8980 28195 320120 153272 3 111 17773321 32935936 22264 16776704 0 153250889 99.765 90464893 32800 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 00:30:39] CVMFS is ok
[2025-11-25 00:30:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 00:30:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 00:30:39] Further information can be found at the LHC@home message board.
[2025-11-25 00:30:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 00:30:39] Checking for apptainer binary...
[2025-11-25 00:30:39] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 00:30:39] Running /usr/bin/apptainer --version
[2025-11-25 00:30:39] apptainer version 1.4.4-1.el9
[2025-11-25 00:30:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 00:30:39] c-5-4.aglt2.org
[2025-11-25 00:30:39] apptainer works
[2025-11-25 00:30:39] Set ATHENA_PROC_NUMBER=9
[2025-11-25 00:30:39] Set ATHENA_CORE_NUMBER=9
[2025-11-25 00:30:39] Starting ATLAS job with PandaID=6895350467
[2025-11-25 00:30:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 21:01:10]  *** The last 200 lines of the pilot log: ***
[2025-11-25 21:01:10] 2025-11-26 02:00:16,245 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.1804249999996
[2025-11-25 21:01:10] 2025-11-26 02:00:16,252 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895350467/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 21:01:10] 2025-11-26 02:00:16,253 | INFO     | extracted standard info from prmon json
[2025-11-25 21:01:10] 2025-11-26 02:00:16,253 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 21:01:10] 2025-11-26 02:00:16,253 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 21:01:10] 2025-11-26 02:00:16,276 | INFO     | fitting pss+swap vs Time
[2025-11-25 21:01:10] 2025-11-26 02:00:16,278 | INFO     | sum of square deviations: 547957234427.2198
[2025-11-25 21:01:10] 2025-11-26 02:00:16,314 | INFO     | sum of deviations: 4694869762426.857
[2025-11-25 21:01:10] 2025-11-26 02:00:16,314 | INFO     | mean x: 1764085524.9520264
[2025-11-25 21:01:10] 2025-11-26 02:00:16,315 | INFO     | mean y: 3103288.669975186
[2025-11-25 21:01:10] 2025-11-26 02:00:16,315 | INFO     | intersect: -15111491918.909533
[2025-11-25 21:01:10] 2025-11-26 02:00:16,316 | INFO     | chi2: 5.518958356221826
[2025-11-25 21:01:10] 2025-11-26 02:00:16,318 | INFO     | sum of square deviations: 541187390053.0868
[2025-11-25 21:01:10] 2025-11-26 02:00:16,353 | INFO     | sum of deviations: 5094255213922.09
[2025-11-25 21:01:10] 2025-11-26 02:00:16,353 | INFO     | mean x: 1764085372.4601328
[2025-11-25 21:01:10] 2025-11-26 02:00:16,354 | INFO     | mean y: 3112282.4601328904
[2025-11-25 21:01:10] 2025-11-26 02:00:16,354 | INFO     | intersect: -16602413403.52673
[2025-11-25 21:01:10] 2025-11-26 02:00:16,355 | INFO     | chi2: 2.7483009036861827
[2025-11-25 21:01:10] 2025-11-26 02:00:16,355 | INFO     | current chi2=2.7483009036861827 (change=50.20254319208857 %)
[2025-11-25 21:01:10] 2025-11-26 02:00:16,357 | INFO     | sum of square deviations: 534473546728.79626
[2025-11-25 21:01:10] 2025-11-26 02:00:16,392 | INFO     | sum of deviations: 5213004602784.247
[2025-11-25 21:01:10] 2025-11-26 02:00:16,392 | INFO     | mean x: 1764085219.968307
[2025-11-25 21:01:10] 2025-11-26 02:00:16,393 | INFO     | mean y: 3114975.7698081736
[2025-11-25 21:01:10] 2025-11-26 02:00:16,393 | INFO     | intersect: -17202945881.092003
[2025-11-25 21:01:10] 2025-11-26 02:00:16,394 | INFO     | chi2: 2.2582753123767336
[2025-11-25 21:01:10] 2025-11-26 02:00:16,394 | INFO     | current chi2=2.2582753123767336 (change=17.830128813486105 %)
[2025-11-25 21:01:10] 2025-11-26 02:00:16,395 | INFO     | right removable region: 1198
[2025-11-25 21:01:10] 2025-11-26 02:00:16,396 | INFO     | sum of square deviations: 541186318102.66736
[2025-11-25 21:01:10] 2025-11-26 02:00:16,437 | INFO     | sum of deviations: 4367757758654.552
[2025-11-25 21:01:10] 2025-11-26 02:00:16,437 | INFO     | mean x: 1764085677.45598
[2025-11-25 21:01:10] 2025-11-26 02:00:16,437 | INFO     | mean y: 3110647.57641196
[2025-11-25 21:01:10] 2025-11-26 02:00:16,438 | INFO     | intersect: -14234313039.801453
[2025-11-25 21:01:10] 2025-11-26 02:00:16,439 | INFO     | chi2: 3.6330654060745644
[2025-11-25 21:01:10] 2025-11-26 02:00:16,439 | INFO     | current chi2=3.6330654060745644 (change=34.17117558100779 %)
[2025-11-25 21:01:10] 2025-11-26 02:00:16,441 | INFO     | sum of square deviations: 534471624270.8306
[2025-11-25 21:01:10] 2025-11-26 02:00:16,482 | INFO     | sum of deviations: 4243189093732.6685
[2025-11-25 21:01:10] 2025-11-26 02:00:16,482 | INFO     | mean x: 1764085829.9574645
[2025-11-25 21:01:10] 2025-11-26 02:00:16,482 | INFO     | mean y: 3113476.483736447
[2025-11-25 21:01:10] 2025-11-26 02:00:16,483 | INFO     | intersect: -14002026205.713564
[2025-11-25 21:01:10] 2025-11-26 02:00:16,484 | INFO     | chi2: 3.548375638780844
[2025-11-25 21:01:10] 2025-11-26 02:00:16,485 | INFO     | current chi2=3.548375638780844 (change=2.3310829238614157 %)
[2025-11-25 21:01:10] 2025-11-26 02:00:16,485 | INFO     | left removable region: 20
[2025-11-25 21:01:10] 2025-11-26 02:00:16,486 | INFO     | sum of square deviations: 506878407595.73926
[2025-11-25 21:01:10] 2025-11-26 02:00:16,527 | INFO     | sum of deviations: 4552986182567.694
[2025-11-25 21:01:10] 2025-11-26 02:00:16,527 | INFO     | mean x: 1764085799.474533
[2025-11-25 21:01:10] 2025-11-26 02:00:16,527 | INFO     | mean y: 3129782.6731748725
[2025-11-25 21:01:10] 2025-11-26 02:00:16,528 | INFO     | intersect: -15842599981.134874
[2025-11-25 21:01:10] 2025-11-26 02:00:16,529 | INFO     | chi2: 0.21363635094287528
[2025-11-25 21:01:10] 2025-11-26 02:00:16,529 | INFO     | current memory leak: 8.98 B/s (using 1178 data points, chi2=0.21)
[2025-11-25 21:01:10] 2025-11-26 02:00:16,531 | INFO     | could have reported an average CPU frequency of 2600 MHz (44 samples)
[2025-11-25 21:01:10] 2025-11-26 02:00:16,531 | INFO     | ..............................
[2025-11-25 21:01:10] 2025-11-26 02:00:16,531 | INFO     | . Timing measurements:
[2025-11-25 21:01:10] 2025-11-26 02:00:16,531 | INFO     | . get job = 0 s
[2025-11-25 21:01:10] 2025-11-26 02:00:16,531 | INFO     | . initial setup = 2 s
[2025-11-25 21:01:10] 2025-11-26 02:00:16,531 | INFO     | . payload setup = 5 s
[2025-11-25 21:01:10] 2025-11-26 02:00:16,532 | INFO     | . stage-in = 0 s
[2025-11-25 21:01:10] 2025-11-26 02:00:16,532 | INFO     | . payload execution = 73729 s
[2025-11-25 21:01:10] 2025-11-26 02:00:16,532 | INFO     | . stage-out = 3 s
[2025-11-25 21:01:10] 2025-11-26 02:00:16,532 | INFO     | . log creation = 0 s
[2025-11-25 21:01:10] 2025-11-26 02:00:16,532 | INFO     | ..............................
[2025-11-25 21:01:10] 2025-11-26 02:00:16,637 | INFO     | 
[2025-11-25 21:01:10] 2025-11-26 02:00:16,638 | INFO     | job summary report
[2025-11-25 21:01:10] 2025-11-26 02:00:16,638 | INFO     | --------------------------------------------------
[2025-11-25 21:01:10] 2025-11-26 02:00:16,638 | INFO     | PanDA job id: 6895350467
[2025-11-25 21:01:10] 2025-11-26 02:00:16,638 | INFO     | task id: 47556137
[2025-11-25 21:01:10] 2025-11-26 02:00:16,638 | INFO     | errors: (none)
[2025-11-25 21:01:10] 2025-11-26 02:00:16,638 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 21:01:10] 2025-11-26 02:00:16,638 | INFO     | pilot state: finished 
[2025-11-25 21:01:10] 2025-11-26 02:00:16,638 | INFO     | transexitcode: 0
[2025-11-25 21:01:10] 2025-11-26 02:00:16,638 | INFO     | exeerrorcode: 0
[2025-11-25 21:01:10] 2025-11-26 02:00:16,639 | INFO     | exeerrordiag: 
[2025-11-25 21:01:10] 2025-11-26 02:00:16,639 | INFO     | exitcode: 0
[2025-11-25 21:01:10] 2025-11-26 02:00:16,639 | INFO     | exitmsg: OK
[2025-11-25 21:01:10] 2025-11-26 02:00:16,639 | INFO     | cpuconsumptiontime: 301558 s
[2025-11-25 21:01:10] 2025-11-26 02:00:16,639 | INFO     | nevents: 1000
[2025-11-25 21:01:10] 2025-11-26 02:00:16,639 | INFO     | neventsw: 0
[2025-11-25 21:01:10] 2025-11-26 02:00:16,639 | INFO     | pid: 1229667
[2025-11-25 21:01:10] 2025-11-26 02:00:16,639 | INFO     | pgrp: 1229667
[2025-11-25 21:01:10] 2025-11-26 02:00:16,639 | INFO     | corecount: 9
[2025-11-25 21:01:10] 2025-11-26 02:00:16,639 | INFO     | event service: False
[2025-11-25 21:01:10] 2025-11-26 02:00:16,639 | INFO     | sizes: {0: 2284208, 4: 2284470, 11: 2284498, 73739: 2343433, 73743: 2352432, 73744: 2352488, 73749: 2352862}
[2025-11-25 21:01:10] 2025-11-26 02:00:16,640 | INFO     | --------------------------------------------------
[2025-11-25 21:01:10] 2025-11-26 02:00:16,640 | INFO     | 
[2025-11-25 21:01:10] 2025-11-26 02:00:16,640 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-25 21:01:10] 2025-11-26 02:00:16,661 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 21:01:10] 2025-11-26 02:00:16,661 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 21:01:10] 2025-11-26 02:00:16,661 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 21:01:10] 2025-11-26 02:00:16,661 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 21:01:10] 2025-11-26 02:00:16,661 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 21:01:10] 2025-11-26 02:00:16,662 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 21:01:10] 2025-11-26 02:00:16,662 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 21:01:10] 2025-11-26 02:00:16,662 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 21:01:10] 2025-11-26 02:00:16,662 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 21:01:10] 2025-11-26 02:00:16,662 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 21:01:10] 2025-11-26 02:00:16,662 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 21:01:10] 2025-11-26 02:00:16,662 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 21:01:10] 2025-11-26 02:00:16,662 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 21:01:10] 2025-11-26 02:00:16,662 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 21:01:10] 2025-11-26 02:00:16,663 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 21:01:10] 2025-11-26 02:00:16,663 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 21:01:10] 2025-11-26 02:00:16,663 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 21:01:10] 2025-11-26 02:00:16,663 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 21:01:10] 2025-11-26 02:00:16,663 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 21:01:10] 2025-11-26 02:00:16,663 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 21:01:10] 2025-11-26 02:00:16,663 | INFO     | job 6895350467 has completed (purged errors)
[2025-11-25 21:01:10] 2025-11-26 02:00:16,664 | INFO     | overall cleanup function is called
[2025-11-25 21:01:10] 2025-11-26 02:00:17,680 | INFO     | --- collectZombieJob: --- 10, [1229667]
[2025-11-25 21:01:10] 2025-11-26 02:00:17,681 | INFO     | zombie collector waiting for pid 1229667
[2025-11-25 21:01:10] 2025-11-26 02:00:17,681 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 21:01:10] 2025-11-26 02:00:17,681 | INFO     | collected zombie processes
[2025-11-25 21:01:10] 2025-11-26 02:00:17,681 | INFO     | will attempt to kill all subprocesses of pid=1229667
[2025-11-25 21:01:10] 2025-11-26 02:00:18,021 | INFO     | process IDs to be killed: [1229667] (in reverse order)
[2025-11-25 21:01:10] 2025-11-26 02:00:18,104 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 21:01:10] 2025-11-26 02:00:18,104 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 21:01:10] 2025-11-26 02:00:18,115 | INFO     | did not find any defunct processes belonging to 1229667
[2025-11-25 21:01:10] 2025-11-26 02:00:18,125 | INFO     | did not find any defunct processes belonging to 1229667
[2025-11-25 21:01:10] 2025-11-26 02:00:18,126 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 21:01:10] 2025-11-26 02:00:18,127 | INFO     | ready for new job
[2025-11-25 21:01:10] 2025-11-26 02:00:18,127 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 21:01:10] 2025-11-26 02:00:18,130 | INFO     | ***************************************
[2025-11-25 21:01:10] 2025-11-26 02:00:18,131 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 21:01:10] 2025-11-26 02:00:18,131 | INFO     | ***************************************
[2025-11-25 21:01:10] 2025-11-26 02:00:18,131 | INFO     | 
[2025-11-25 21:01:10] 2025-11-26 02:00:18,132 | INFO     | architecture information:
[2025-11-25 21:01:10] 2025-11-26 02:00:18,132 | INFO     | executing command: cat /etc/os-release
[2025-11-25 21:01:10] 2025-11-26 02:00:18,142 | INFO     | cat /etc/os-release:
[2025-11-25 21:01:10] NAME="CentOS Linux"
[2025-11-25 21:01:10] VERSION="7 (Core)"
[2025-11-25 21:01:10] ID="centos"
[2025-11-25 21:01:10] ID_LIKE="rhel fedora"
[2025-11-25 21:01:10] VERSION_ID="7"
[2025-11-25 21:01:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 21:01:10] ANSI_COLOR="0;31"
[2025-11-25 21:01:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 21:01:10] HOME_URL="https://www.centos.org/"
[2025-11-25 21:01:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 21:01:10] 
[2025-11-25 21:01:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 21:01:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 21:01:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 21:01:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 21:01:10] 
[2025-11-25 21:01:10] 2025-11-26 02:00:18,142 | INFO     | ***************************************
[2025-11-25 21:01:10] 2025-11-26 02:00:18,645 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-25 21:01:10] 2025-11-26 02:00:18,659 | INFO     | sufficient remaining disk space (73353134080 B)
[2025-11-25 21:01:10] 2025-11-26 02:00:18,659 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 21:01:10] 2025-11-26 02:00:18,660 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 21:01:10] 2025-11-26 02:00:18,660 | INFO     | update_server=False
[2025-11-25 21:01:10] 2025-11-26 02:00:18,660 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 21:01:10] 2025-11-26 02:00:18,660 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 21:01:10] 2025-11-26 02:00:18,673 | INFO     | all data control threads have been joined
[2025-11-25 21:01:10] 2025-11-26 02:00:18,805 | INFO     | all payload control threads have been joined
[2025-11-25 21:01:10] 2025-11-26 02:00:19,125 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-25 21:01:10] 2025-11-26 02:00:19,126 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-25 21:01:10] 2025-11-26 02:00:19,126 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 21:01:10] 2025-11-26 02:00:19,126 | INFO     | will abort loop
[2025-11-25 21:01:10] 2025-11-26 02:00:19,664 | INFO     | [job] retrieve thread has finished
[2025-11-25 21:01:10] 2025-11-26 02:00:19,678 | INFO     | [data] control thread has finished
[2025-11-25 21:01:10] 2025-11-26 02:00:19,810 | INFO     | [payload] control thread has finished
[2025-11-25 21:01:10] 2025-11-26 02:00:20,103 | INFO     | [payload] validate_post thread has finished
[2025-11-25 21:01:10] 2025-11-26 02:00:20,132 | INFO     | [job] job monitor thread has finished
[2025-11-25 21:01:10] 2025-11-26 02:00:20,163 | INFO     | all job control threads have been joined
[2025-11-25 21:01:10] 2025-11-26 02:00:20,204 | INFO     | [data] copytool_in thread has finished
[2025-11-25 21:01:10] 2025-11-26 02:00:20,536 | INFO     | [payload] failed_post thread has finished
[2025-11-25 21:01:10] 2025-11-26 02:00:20,669 | INFO     | [data] copytool_out thread has finished
[2025-11-25 21:01:10] 2025-11-26 02:00:20,744 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 21:01:10] 2025-11-26 02:00:20,863 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 21:01:10] 2025-11-26 02:00:20,930 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 21:01:10] 2025-11-26 02:00:21,123 | INFO     | [job] validate thread has finished
[2025-11-25 21:01:10] 2025-11-26 02:00:21,172 | INFO     | [job] control thread has finished
[2025-11-25 21:01:10] 2025-11-26 02:00:21,649 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 21:01:10] 2025-11-26 02:00:22,013 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 21:01:10] 2025-11-26 02:00:22,655 | INFO     | [job] queue monitor thread has finished
[2025-11-25 21:01:10] 2025-11-26 02:00:26,019 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 21:01:10] 2025-11-26 02:00:29,288 | INFO     | job.realtimelogging is not enabled
[2025-11-25 21:01:10] 2025-11-26 02:00:30,294 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 21:01:10] 2025-11-26 02:00:48,840 | INFO     | PID=1202969 has CPU usage=8.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-25 21:01:10] 2025-11-26 02:00:48,840 | INFO     | .. there are 42 such processes running
[2025-11-25 21:01:10] 2025-11-26 02:00:48,840 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 21:01:10] 2025-11-26 02:00:48,840 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 21:01:10] 2025-11-26 02:00:48,840 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 21:01:10] 2025-11-26 02:01:00,628 [wrapper] supervise_pilot (15 min periods counter: 83)
[2025-11-25 21:01:10] 2025-11-26 02:01:03,644 | INFO     | [monitor] cgroup control has ended
[2025-11-25 21:01:10] 2025-11-26 02:01:05,123 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140542773827392)>', '<ExcThread(monitor, started 140542050555648)>']
[2025-11-25 21:01:10] 2025-11-26 02:01:05,925 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 21:01:10] 2025-11-26 02:01:05,926 | INFO     | [monitor] control thread has ended
[2025-11-25 21:01:10] 2025-11-26 02:01:10,148 | INFO     | all workflow threads have been joined
[2025-11-25 21:01:10] 2025-11-26 02:01:10,149 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 21:01:10] 2025-11-26 02:01:10,149 | INFO     | traces error code: 0
[2025-11-25 21:01:10] 2025-11-26 02:01:10,149 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 21:01:10] 2025-11-26 02:01:10,286 [wrapper] ==== pilot stdout END ====
[2025-11-25 21:01:10] 2025-11-26 02:01:10,289 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 21:01:10] 2025-11-26 02:01:10,292 [wrapper] pilotpid: 1202969
[2025-11-25 21:01:10] 2025-11-26 02:01:10,294 [wrapper] Pilot exit status: 0
[2025-11-25 21:01:10] 2025-11-26 02:01:10,304 [wrapper] pandaids: 6895350467 6895350467 6895350467
[2025-11-25 21:01:10] 2025-11-26 02:01:10,368 [wrapper] cleanup supervisor_pilot 1179630 1202970
[2025-11-25 21:01:10] 2025-11-26 02:01:10,371 [wrapper] Test setup, not cleaning
[2025-11-25 21:01:10] 2025-11-26 02:01:10,373 [wrapper] apfmon messages muted
[2025-11-25 21:01:10] 2025-11-26 02:01:10,376 [wrapper] ==== wrapper stdout END ====
[2025-11-25 21:01:10] 2025-11-26 02:01:10,379 [wrapper] ==== wrapper stderr END ====
[2025-11-25 21:01:10]  *** Error codes and diagnostics ***
[2025-11-25 21:01:10]     "exeErrorCode": 0,
[2025-11-25 21:01:10]     "exeErrorDiag": "",
[2025-11-25 21:01:10]     "pilotErrorCode": 0,
[2025-11-25 21:01:10]     "pilotErrorDiag": "",
[2025-11-25 21:01:10]  *** Listing of results directory ***
[2025-11-25 21:01:10] total 1715888
[2025-11-25 21:01:10] drwx------. 5 boincer umatlas      4096 Nov  5 12:16 pilot3
[2025-11-25 21:01:10] -rw-r--r--. 1 boincer umatlas    576529 Nov 22 16:11 pilot3.tar.gz
[2025-11-25 21:01:10] -rw-r--r--. 1 boincer umatlas      5112 Nov 22 16:14 queuedata.json
[2025-11-25 21:01:10] -rwx------. 1 boincer umatlas     36292 Nov 22 16:15 runpilot2-wrapper.sh
[2025-11-25 21:01:10] -rw-r--r--. 1 boincer umatlas       100 Nov 24 00:14 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 21:01:10] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 24 00:14 run_atlas
[2025-11-25 21:01:10] -rw-r--r--. 1 boincer umatlas       105 Nov 24 00:14 job.xml
[2025-11-25 21:01:10] -rw-r--r--. 3 boincer umatlas 407307266 Nov 24 00:14 EVNT.47483658._000512.pool.root.1
[2025-11-25 21:01:10] -rw-r--r--. 3 boincer umatlas 407307266 Nov 24 00:14 ATLAS.root_0
[2025-11-25 21:01:10] -rw-r--r--. 2 boincer umatlas    590099 Nov 24 00:14 input.tar.gz
[2025-11-25 21:01:10] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 00:14 start_atlas.sh
[2025-11-25 21:01:10] drwxrwx--x. 2 boincer umatlas      4096 Nov 24 00:14 shared
[2025-11-25 21:01:10] -rw-r--r--. 1 boincer umatlas         0 Nov 24 00:14 boinc_lockfile
[2025-11-25 21:01:10] -rw-r--r--. 1 boincer umatlas      2784 Nov 25 00:30 pandaJob.out
[2025-11-25 21:01:10] -rw-------. 1 boincer umatlas        57 Nov 25 00:30 setup.sh.local
[2025-11-25 21:01:10] -rw-------. 1 boincer umatlas    991801 Nov 25 00:30 agis_schedconf.cvmfs.json
[2025-11-25 21:01:10] -rw-r--r--. 1 boincer umatlas       534 Nov 25 20:49 boinc_task_state.xml
[2025-11-25 21:01:10] -rw-r--r--. 1 boincer umatlas      6660 Nov 25 20:56 init_data.xml
[2025-11-25 21:01:10] -rw-------. 1 boincer umatlas 915074384 Nov 25 20:59 HITS.47556137._005073.pool.root.1
[2025-11-25 21:01:10] -rw-------. 1 boincer umatlas        96 Nov 25 20:59 pilot_heartbeat.json
[2025-11-25 21:01:10] -rw-------. 1 boincer umatlas      1069 Nov 25 21:00 memory_monitor_summary.json
[2025-11-25 21:01:10] -rw-------. 1 boincer umatlas   1516240 Nov 25 21:00 agis_ddmendpoints.agis.ALL.json
[2025-11-25 21:01:10] -rw-------. 1 boincer umatlas   2407734 Nov 25 21:00 log.47556137._005073.job.log.tgz.1
[2025-11-25 21:01:10] -rw-------. 1 boincer umatlas      8626 Nov 25 21:00 heartbeat.json
[2025-11-25 21:01:10] -rw-r--r--. 1 boincer umatlas      8192 Nov 25 21:01 boinc_mmap_file
[2025-11-25 21:01:10] -rw-r--r--. 1 boincer umatlas        30 Nov 25 21:01 wrapper_checkpoint.txt
[2025-11-25 21:01:10] -rw-------. 1 boincer umatlas      5082 Nov 25 21:01 pilotlog.txt
[2025-11-25 21:01:10] -rw-------. 1 boincer umatlas   9319803 Nov 25 21:01 log.47556137._005073.job.log.1
[2025-11-25 21:01:10] -rw-------. 1 boincer umatlas       353 Nov 25 21:01 output.list
[2025-11-25 21:01:10] -rw-r--r--. 1 boincer umatlas       620 Nov 25 21:01 runtime_log
[2025-11-25 21:01:10] -rw-------. 1 boincer umatlas  11745280 Nov 25 21:01 result.tar.gz
[2025-11-25 21:01:10] -rw-------. 1 boincer umatlas       911 Nov 25 21:01 YkUKDmC89g8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmqIIKDmaQtcwm.diag
[2025-11-25 21:01:10] -rw-r--r--. 1 boincer umatlas      9413 Nov 25 21:01 runtime_log.err
[2025-11-25 21:01:10] -rw-r--r--. 1 boincer umatlas     25836 Nov 25 21:01 stderr.txt
[2025-11-25 21:01:10] HITS file was successfully produced:
[2025-11-25 21:01:10] -rw-------. 1 boincer umatlas 915074384 Nov 25 20:59 shared/HITS.pool.root.1
[2025-11-25 21:01:10]  *** Contents of shared directory: ***
[2025-11-25 21:01:10] total 1303464
[2025-11-25 21:01:10] -rw-r--r--. 3 boincer umatlas 407307266 Nov 24 00:14 ATLAS.root_0
[2025-11-25 21:01:10] -rw-r--r--. 2 boincer umatlas    590099 Nov 24 00:14 input.tar.gz
[2025-11-25 21:01:10] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 00:14 start_atlas.sh
[2025-11-25 21:01:10] -rw-------. 1 boincer umatlas 915074384 Nov 25 20:59 HITS.pool.root.1
[2025-11-25 21:01:10] -rw-------. 1 boincer umatlas  11745280 Nov 25 21:01 result.tar.gz
21:01:12 (1184753): run_atlas exited; CPU time 304201.530348
21:01:12 (1184753): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN