Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:10:18 (2595973): wrapper (7.7.26015): starting
22:10:18 (2595973): wrapper: running run_atlas (--nthreads 12)
[2025-11-23 22:10:18] Arguments: --nthreads 12
[2025-11-23 22:10:18] Threads: 12
[2025-11-23 22:10:18] Checking for CVMFS
[2025-11-23 22:10:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 22:10:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 22:10:21] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 22:10:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 22:10:23] 2.11.5.0 831512 25014 339016 153235 0 131 37830867 45568000 11559 130560 0 119217851 99.742 92316899 22939 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-11-23 22:10:23] CVMFS is ok
[2025-11-23 22:10:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 22:10:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 22:10:23] Further information can be found at the LHC@home message board.
[2025-11-23 22:10:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 22:10:23] Checking for apptainer binary...
[2025-11-23 22:10:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 22:10:23] Running /usr/bin/apptainer --version
[2025-11-23 22:10:23] apptainer version 1.4.1-1.el9
[2025-11-23 22:10:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 22:10:24] wns0042.triumf.lcg
[2025-11-23 22:10:24] apptainer works
[2025-11-23 22:10:25] Set ATHENA_PROC_NUMBER=12
[2025-11-23 22:10:25] Set ATHENA_CORE_NUMBER=12
[2025-11-23 22:10:25] Starting ATLAS job with PandaID=6895369015
[2025-11-23 22:10:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 22:21:39]  *** The last 200 lines of the pilot log: ***
[2025-11-23 22:21:39] 2025-11-24 06:20:33,485 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-23 22:21:39] 2025-11-24 06:20:33,486 | WARNING  | wrong length of table data, x=[1763964857.0, 1763964918.0, 1763964979.0, 1763965040.0], y=[1533.0, 276728.0, 827502.0, 500157.0] (must be same and length>=4)
[2025-11-23 22:21:39] 2025-11-24 06:20:33,487 | INFO     | could have reported an average CPU frequency of 1293 MHz (4 samples)
[2025-11-23 22:21:39] 2025-11-24 06:20:33,487 | INFO     | ..............................
[2025-11-23 22:21:39] 2025-11-24 06:20:33,487 | INFO     | . Timing measurements:
[2025-11-23 22:21:39] 2025-11-24 06:20:33,487 | INFO     | . get job = 0 s
[2025-11-23 22:21:39] 2025-11-24 06:20:33,487 | INFO     | . initial setup = 7 s
[2025-11-23 22:21:39] 2025-11-24 06:20:33,487 | INFO     | . payload setup = 43 s
[2025-11-23 22:21:39] 2025-11-24 06:20:33,487 | INFO     | . stage-in = 0 s
[2025-11-23 22:21:39] 2025-11-24 06:20:33,488 | INFO     | . payload execution = 272 s
[2025-11-23 22:21:39] 2025-11-24 06:20:33,488 | INFO     | . stage-out = 1 s
[2025-11-23 22:21:39] 2025-11-24 06:20:33,488 | INFO     | . log creation = 0 s
[2025-11-23 22:21:39] 2025-11-24 06:20:33,488 | INFO     | ..............................
[2025-11-23 22:21:39] 2025-11-24 06:20:33,513 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-23 22:21:39] 2025-11-24 06:20:33,514 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6895369015/pilotlog.txt
[2025-11-23 22:21:39] 2025-11-24 06:20:33,568 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-11-23 22:21:39] - Log from pilotlog.txt -
[2025-11-23 22:21:39] 2025-11-24 06:20:33,422 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6895369015/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 22:21:39] 2025-11-24 06:20:33,469 | INFO     | extracted standard info from prmon json
[2025-11-23 22:21:39] 2025-11-24 06:20:33,469 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 22:21:39] 2025-11-24 06:20:33,469 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 22:21:39] 2025-11-24 06:20:33,484 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-23 22:21:39] 2025-11-24 06:20:33,485 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-23 22:21:39] 2025-11-24 06:20:33,486 | WARNING  | wrong length of table data, x=[1763964857.0, 1763964918.0, 1763964979.0, 1763965040.0], y=[1533.0, 276728.0, 827502.0, 500157.0] (must be same and length>=4)
[2025-11-23 22:21:39] 2025-11-24 06:20:33,487 | INFO     | could have reported an average CPU frequency of 1293 MHz (4 samples)
[2025-11-23 22:21:39] 2025-11-24 06:20:33,487 | INFO     | ..............................
[2025-11-23 22:21:39] 2025-11-24 06:20:33,487 | INFO     | . Timing measurements:
[2025-11-23 22:21:39] 2025-11-24 06:20:33,487 | INFO     | . get job = 0 s
[2025-11-23 22:21:39] 2025-11-24 06:20:33,487 | INFO     | . initial setup = 7 s
[2025-11-23 22:21:39] 2025-11-24 06:20:33,487 | INFO     | . payload setup = 43 s
[2025-11-23 22:21:39] 2025-11-24 06:20:33,487 | INFO     | . stage-in = 0 s
[2025-11-23 22:21:39] 2025-11-24 06:20:33,488 | INFO     | . payload execution = 272 s
[2025-11-23 22:21:39] 2025-11-24 06:20:33,488 | INFO     | . stage-out = 1 s
[2025-11-23 22:21:39] 2025-11-24 06:20:33,488 | INFO     | . log creation = 0 s
[2025-11-23 22:21:39] 2025-11-24 06:20:33,488 | INFO     | ..............................
[2025-11-23 22:21:39] 2025-11-24 06:20:33,513 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-23 22:21:39] 2025-11-24 06:20:33,514 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6895369015/pilotlog.txt
[2025-11-23 22:21:39] 2025-11-24 06:20:33,568 | WARNING  | 
[2025-11-23 22:21:39] [begin log extracts]
[2025-11-23 22:21:39] - Log from pilotlog.txt -
[2025-11-23 22:21:39] 2025-11-24 06:20:33,422 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6895369015/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 22:21:39] 2025-11-24 06:20:33,469 | INFO     | extracted standard info from prmon json
[2025-11-23 22:21:39] 2025-11-24 06:20:33,469 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 22:21:39] 2025-11-24 06:20:33,469 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 22:21:39] 2025-11-24 06:20:33,484 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-23 22:21:39] 2025-11-24 06:20:33,485 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-23 22:21:39] 2025-11-24 06:20:33,486 | WARNING  | wrong length of table data, x=[1763964857.0, 1763964918.0, 1763964979.0, 1763965040.0], y=[1533.0, 276728.0, 827502.0, 500157.0] (must be same and length>=4)
[2025-11-23 22:21:39] 2025-11-24 06:20:33,487 | INFO     | could have reported an average CPU frequency of 1293 MHz (4 samples)
[2025-11-23 22:21:39] 2025-11-24 06:20:33,487 | INFO     | ..............................
[2025-11-23 22:21:39] 2025-11-24 06:20:33,487 | INFO     | . Timing measurements:
[2025-11-23 22:21:39] 2025-11-24 06:20:33,487 | INFO     | . get job = 0 s
[2025-11-23 22:21:39] 2025-11-24 06:20:33,487 | INFO     | . initial setup = 7 s
[2025-11-23 22:21:39] 2025-11-24 06:20:33,487 | INFO     | . payload setup = 43 s
[2025-11-23 22:21:39] 2025-11-24 06:20:33,487 | INFO     | . stage-in = 0 s
[2025-11-23 22:21:39] 2025-11-24 06:20:33,488 | INFO     | . payload execution = 272 s
[2025-11-23 22:21:39] 2025-11-24 06:20:33,488 | INFO     | . stage-out = 1 s
[2025-11-23 22:21:39] 2025-11-24 06:20:33,488 | INFO     | . log creation = 0 s
[2025-11-23 22:21:39] 2025-11-24 06:20:33,488 | INFO     | ..............................
[2025-11-23 22:21:39] 2025-11-24 06:20:33,513 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-23 22:21:39] 2025-11-24 06:20:33,514 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6895369015/pilotlog.txt
[2025-11-23 22:21:39] [end log extracts]
[2025-11-23 22:21:39] 2025-11-24 06:20:33,569 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2025-11-23 22:21:39] 2025-11-24 06:20:33,570 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-11-23 22:21:39] 2025-11-24 06:20:33,679 | INFO     | 
[2025-11-23 22:21:39] 2025-11-24 06:20:33,680 | INFO     | job summary report
[2025-11-23 22:21:39] 2025-11-24 06:20:33,680 | INFO     | --------------------------------------------------
[2025-11-23 22:21:39] 2025-11-24 06:20:33,680 | INFO     | PanDA job id: 6895369015
[2025-11-23 22:21:39] 2025-11-24 06:20:33,680 | INFO     | task id: 47556137
[2025-11-23 22:21:39] 2025-11-24 06:20:33,680 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-11-23 22:18:01,791 CRITICAL Transform executor raised TransformValidationExceptio
[2025-11-23 22:21:39] 2025-11-24 06:20:33,680 | INFO     | error 2/2: 1165: Local output file is missing
[2025-11-23 22:21:39] 2025-11-24 06:20:33,680 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 22:21:39] 2025-11-24 06:20:33,680 | INFO     | pilot state: failed 
[2025-11-23 22:21:39] 2025-11-24 06:20:33,680 | INFO     | transexitcode: 65
[2025-11-23 22:21:39] 2025-11-24 06:20:33,681 | INFO     | exeerrorcode: 65
[2025-11-23 22:21:39] 2025-11-24 06:20:33,681 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFL
[2025-11-23 22:21:39] 2025-11-24 06:20:33,681 | INFO     | exitcode: 65
[2025-11-23 22:21:39] 2025-11-24 06:20:33,681 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 
[2025-11-23 22:21:39] 2025-11-24 06:20:33,681 | INFO     | cpuconsumptiontime: 83 s
[2025-11-23 22:21:39] 2025-11-24 06:20:33,681 | INFO     | nevents: 0
[2025-11-23 22:21:39] 2025-11-24 06:20:33,681 | INFO     | neventsw: 0
[2025-11-23 22:21:39] 2025-11-24 06:20:33,681 | INFO     | pid: 2606550
[2025-11-23 22:21:39] 2025-11-24 06:20:33,681 | INFO     | pgrp: 2606550
[2025-11-23 22:21:39] 2025-11-24 06:20:33,681 | INFO     | corecount: 12
[2025-11-23 22:21:39] 2025-11-24 06:20:33,681 | INFO     | event service: False
[2025-11-23 22:21:39] 2025-11-24 06:20:33,682 | INFO     | sizes: {0: 2297978, 2: 2298576, 3: 2298660, 4: 2298773, 5: 2298943, 6: 2298943, 17: 2299099, 29: 2299127, 42: 2299445, 54: 2299473, 316: 2324978, 317: 2325262, 318
[2025-11-23 22:21:39] 2025-11-24 06:20:33,682 | INFO     | --------------------------------------------------
[2025-11-23 22:21:39] 2025-11-24 06:20:33,682 | INFO     | 
[2025-11-23 22:21:39] 2025-11-24 06:20:33,682 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-11-23 22:21:39] 2025-11-24 06:20:33,708 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 22:21:39] 2025-11-24 06:20:33,710 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 22:21:39] 2025-11-24 06:20:33,710 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 22:21:39] 2025-11-24 06:20:33,710 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 22:21:39] 2025-11-24 06:20:33,710 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 22:21:39] 2025-11-24 06:20:33,710 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 22:21:39] 2025-11-24 06:20:33,710 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 22:21:39] 2025-11-24 06:20:33,710 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 22:21:39] 2025-11-24 06:20:33,711 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 22:21:39] 2025-11-24 06:20:33,711 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 22:21:39] 2025-11-24 06:20:33,711 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 22:21:39] 2025-11-24 06:20:33,711 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 22:21:39] 2025-11-24 06:20:33,711 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 22:21:39] 2025-11-24 06:20:33,711 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 22:21:39] 2025-11-24 06:20:33,711 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 22:21:39] 2025-11-24 06:20:33,711 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 22:21:39] 2025-11-24 06:20:33,711 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 22:21:39] 2025-11-24 06:20:33,711 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 22:21:39] 2025-11-24 06:20:33,712 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 22:21:39] 2025-11-24 06:20:33,712 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 22:21:39] 2025-11-24 06:20:33,712 | INFO     | job 6895369015 has completed (purged errors)
[2025-11-23 22:21:39] 2025-11-24 06:20:33,712 | INFO     | overall cleanup function is called
[2025-11-23 22:21:39] 2025-11-24 06:20:34,721 | INFO     | --- collectZombieJob: --- 10, [2606550]
[2025-11-23 22:21:39] 2025-11-24 06:20:34,721 | INFO     | zombie collector waiting for pid 2606550
[2025-11-23 22:21:39] 2025-11-24 06:20:34,722 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 22:21:39] 2025-11-24 06:20:34,722 | INFO     | collected zombie processes
[2025-11-23 22:21:39] 2025-11-24 06:20:34,722 | INFO     | will attempt to kill all subprocesses of pid=2606550
[2025-11-23 22:21:39] 2025-11-24 06:20:35,759 | INFO     | process IDs to be killed: [2606550] (in reverse order)
[2025-11-23 22:21:39] 2025-11-24 06:20:36,200 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 22:21:39] 2025-11-24 06:20:36,200 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 22:21:39] 2025-11-24 06:20:36,222 | INFO     | did not find any defunct processes belonging to 2606550
[2025-11-23 22:21:39] 2025-11-24 06:20:36,238 | INFO     | did not find any defunct processes belonging to 2606550
[2025-11-23 22:21:39] 2025-11-24 06:20:36,239 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 22:21:39] 2025-11-24 06:20:36,239 | INFO     | ready for new job
[2025-11-23 22:21:39] 2025-11-24 06:20:36,239 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 22:21:39] 2025-11-24 06:20:36,241 | INFO     | ***************************************
[2025-11-23 22:21:39] 2025-11-24 06:20:36,242 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 22:21:39] 2025-11-24 06:20:36,242 | INFO     | ***************************************
[2025-11-23 22:21:39] 2025-11-24 06:20:36,242 | INFO     | 
[2025-11-23 22:21:39] 2025-11-24 06:20:36,245 | INFO     | architecture information:
[2025-11-23 22:21:39] 2025-11-24 06:20:36,246 | INFO     | executing command: cat /etc/os-release
[2025-11-23 22:21:39] 2025-11-24 06:20:36,265 | INFO     | cat /etc/os-release:
[2025-11-23 22:21:39] NAME="CentOS Linux"
[2025-11-23 22:21:39] VERSION="7 (Core)"
[2025-11-23 22:21:39] ID="centos"
[2025-11-23 22:21:39] ID_LIKE="rhel fedora"
[2025-11-23 22:21:39] VERSION_ID="7"
[2025-11-23 22:21:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 22:21:39] ANSI_COLOR="0;31"
[2025-11-23 22:21:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 22:21:39] HOME_URL="https://www.centos.org/"
[2025-11-23 22:21:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 22:21:39] 
[2025-11-23 22:21:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 22:21:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 22:21:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 22:21:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 22:21:39] 
[2025-11-23 22:21:39] 2025-11-24 06:20:36,266 | INFO     | ***************************************
[2025-11-23 22:21:39] 2025-11-24 06:20:36,769 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-11-23 22:21:39] 2025-11-24 06:20:36,844 | INFO     | sufficient remaining disk space (1910662758400 B)
[2025-11-23 22:21:39] 2025-11-24 06:20:36,844 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 22:21:39] 2025-11-24 06:20:36,845 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 22:21:39] 2025-11-24 06:20:36,845 | INFO     | update_server=False
[2025-11-23 22:21:39] 2025-11-24 06:20:36,845 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 22:21:39] 2025-11-24 06:20:36,849 | INFO     | all job control threads have been joined
[2025-11-23 22:21:39] 2025-11-24 06:20:36,855 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 22:21:39] 2025-11-24 06:20:36,855 | INFO     | aborting loop
[2025-11-23 22:21:39] 2025-11-24 06:20:37,066 | INFO     | all data control threads have been joined
[2025-11-23 22:21:39] 2025-11-24 06:20:37,152 | INFO     | all payload control threads have been joined
[2025-11-23 22:21:39] 2025-11-24 06:20:37,598 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 22:21:39] 2025-11-24 06:20:37,851 | INFO     | [job] retrieve thread has finished
[2025-11-23 22:21:39] 2025-11-24 06:20:37,855 | INFO     | [job] control thread has finished
[2025-11-23 22:21:39] 2025-11-24 06:20:37,861 | INFO     | [job] job monitor thread has finished
[2025-11-23 22:21:39] 2025-11-24 06:20:37,914 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 22:21:39] 2025-11-24 06:20:37,961 | INFO     | [job] validate thread has finished
[2025-11-23 22:21:39] 2025-11-24 06:20:38,072 | INFO     | [data] control thread has finished
[2025-11-23 22:21:39] 2025-11-24 06:20:38,157 | INFO     | [payload] control thread has finished
[2025-11-23 22:21:39] 2025-11-24 06:20:38,541 | INFO     | [payload] failed_post thread has finished
[2025-11-23 22:21:39] 2025-11-24 06:20:38,704 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 22:21:39] 2025-11-24 06:20:38,710 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 22:21:39] 2025-11-24 06:20:38,798 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 22:21:39] 2025-11-24 06:20:38,908 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 22:21:39] 2025-11-24 06:20:38,909 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 22:21:39] 2025-11-24 06:20:39,069 | INFO     | [data] copytool_in thread has finished
[2025-11-23 22:21:39] 2025-11-24 06:20:39,216 | INFO     | [payload] validate_post thread has finished
[2025-11-23 22:21:39] 2025-11-24 06:20:39,716 | INFO     | [job] queue monitor thread has finished
[2025-11-23 22:21:39] 2025-11-24 06:20:39,921 | INFO     | [data] copytool_out thread has finished
[2025-11-23 22:21:39] 2025-11-24 06:20:41,607 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 22:21:39] 2025-11-24 06:21:06,478 | INFO     | PID=2599804 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-23 22:21:39] 2025-11-24 06:21:06,478 | INFO     | .. there are 14 such processes running
[2025-11-23 22:21:39] 2025-11-24 06:21:06,479 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 22:21:39] 2025-11-24 06:21:06,479 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 22:21:39] 2025-11-24 06:21:06,480 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 22:21:39] 2025-11-24 06:21:30,688 | INFO     | [monitor] cgroup control has ended
[2025-11-23 22:21:39] 2025-11-24 06:21:32,005 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139855441475392)>', '<ExcThread(monitor, started 139855040329472)>']
[2025-11-23 22:21:39] 2025-11-24 06:21:32,648 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 22:21:39] 2025-11-24 06:21:32,648 | INFO     | [monitor] control thread has ended
[2025-11-23 22:21:39] 2025-11-24 06:21:37,031 | INFO     | all workflow threads have been joined
[2025-11-23 22:21:39] 2025-11-24 06:21:37,031 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 22:21:39] 2025-11-24 06:21:37,032 | INFO     | traces error code: 0
[2025-11-23 22:21:39] 2025-11-24 06:21:37,032 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 22:21:39] 2025-11-24 06:21:37,817 [wrapper] ==== pilot stdout END ====
[2025-11-23 22:21:39] 2025-11-24 06:21:37,820 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 22:21:39] 2025-11-24 06:21:37,854 [wrapper] pilotpid: 2599804
[2025-11-23 22:21:39] 2025-11-24 06:21:37,868 [wrapper] Pilot exit status: 0
[2025-11-23 22:21:39] 2025-11-24 06:21:38,038 [wrapper] pandaids: 6895369015
[2025-11-23 22:21:39] 2025-11-24 06:21:38,430 [wrapper] cleanup supervisor_pilot 2599810 2599805
[2025-11-23 22:21:39] 2025-11-24 06:21:38,440 [wrapper] Test setup, not cleaning
[2025-11-23 22:21:39] 2025-11-24 06:21:38,486 [wrapper] apfmon messages muted
[2025-11-23 22:21:39] 2025-11-24 06:21:38,511 [wrapper] ==== wrapper stdout END ====
[2025-11-23 22:21:39] 2025-11-24 06:21:38,529 [wrapper] ==== wrapper stderr END ====
[2025-11-23 22:21:39]  *** Error codes and diagnostics ***
[2025-11-23 22:21:39]     "exeErrorCode": 65,
[2025-11-23 22:21:39]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 cannot be opened - STOP\"",
[2025-11-23 22:21:39]     "pilotErrorCode": 1305,
[2025-11-23 22:21:39]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 canno",
[2025-11-23 22:21:39]  *** Listing of results directory ***
[2025-11-23 22:21:39] total 406280
[2025-11-23 22:21:39] -rw-r--r--. 1 boinc boinc    576529 Nov 23 11:32 pilot3.tar.gz
[2025-11-23 22:21:39] -rw-r--r--. 1 boinc boinc      5112 Nov 23 11:51 queuedata.json
[2025-11-23 22:21:39] -rwx------. 1 boinc boinc     36292 Nov 23 11:53 runpilot2-wrapper.sh
[2025-11-23 22:21:39] -rw-r--r--. 1 boinc boinc       100 Nov 23 22:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 22:21:39] -rwxr-xr-x. 1 boinc boinc      7986 Nov 23 22:10 run_atlas
[2025-11-23 22:21:39] -rw-r--r--. 1 boinc boinc       105 Nov 23 22:10 job.xml
[2025-11-23 22:21:39] -rw-r--r--. 1 boinc boinc      6595 Nov 23 22:10 init_data.xml
[2025-11-23 22:21:39] -rw-r--r--. 2 boinc boinc 411748312 Nov 23 22:10 EVNT.47483658._000878.pool.root.1
[2025-11-23 22:21:39] drwxrwx--x. 2 boinc boinc      4096 Nov 23 22:10 shared
[2025-11-23 22:21:39] -rw-r--r--. 2 boinc boinc    590101 Nov 23 22:10 input.tar.gz
[2025-11-23 22:21:39] -rw-r--r--. 2 boinc boinc     15847 Nov 23 22:10 start_atlas.sh
[2025-11-23 22:21:39] -rw-r--r--. 1 boinc boinc         0 Nov 23 22:10 boinc_lockfile
[2025-11-23 22:21:39] -rw-r--r--. 1 boinc boinc      2785 Nov 23 22:10 pandaJob.out
[2025-11-23 22:21:39] -rw-------. 1 boinc boinc    989786 Nov 23 22:11 agis_schedconf.cvmfs.json
[2025-11-23 22:21:39] -rw-------. 1 boinc boinc   1526164 Nov 23 22:11 agis_ddmendpoints.agis.ALL.json
[2025-11-23 22:21:39] drwx------. 5 boinc boinc      4096 Nov 23 22:11 pilot3
[2025-11-23 22:21:39] -rw-r--r--. 1 boinc boinc       524 Nov 23 22:18 boinc_task_state.xml
[2025-11-23 22:21:39] -rw-------. 1 boinc boinc       995 Nov 23 22:18 memory_monitor_summary.json
[2025-11-23 22:21:39] -rw-------. 1 boinc boinc     52390 Nov 23 22:18 log.47556137._008642.job.log.tgz.1
[2025-11-23 22:21:39] -rw-------. 1 boinc boinc        95 Nov 23 22:20 pilot_heartbeat.json
[2025-11-23 22:21:39] -rw-------. 1 boinc boinc     10340 Nov 23 22:20 heartbeat.json
[2025-11-23 22:21:39] -rw-------. 1 boinc boinc      4823 Nov 23 22:21 pilotlog.txt
[2025-11-23 22:21:39] -rw-r--r--. 1 boinc boinc      8192 Nov 23 22:21 boinc_mmap_file
[2025-11-23 22:21:39] -rw-r--r--. 1 boinc boinc        23 Nov 23 22:21 wrapper_checkpoint.txt
[2025-11-23 22:21:39] -rw-------. 1 boinc boinc    127318 Nov 23 22:21 log.47556137._008642.job.log.1
[2025-11-23 22:21:39] -rw-------. 1 boinc boinc       186 Nov 23 22:21 output.list
[2025-11-23 22:21:39] -rw-r--r--. 1 boinc boinc       620 Nov 23 22:21 runtime_log
[2025-11-23 22:21:39] -rw-------. 1 boinc boinc    204800 Nov 23 22:21 result.tar.gz
[2025-11-23 22:21:39] -rw-r--r--. 1 boinc boinc      8636 Nov 23 22:21 runtime_log.err
[2025-11-23 22:21:39] -rw-------. 1 boinc boinc       646 Nov 23 22:21 IEGNDmRKVh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmRjIKDmh63TNo.diag
[2025-11-23 22:21:39] -rw-r--r--. 1 boinc boinc     22680 Nov 23 22:21 stderr.txt
[2025-11-23 22:21:39] No HITS result produced
[2025-11-23 22:21:39]  *** Contents of shared directory: ***
[2025-11-23 22:21:39] total 402900
[2025-11-23 22:21:39] -rw-r--r--. 2 boinc boinc 411748312 Nov 23 22:10 ATLAS.root_0
[2025-11-23 22:21:39] -rw-r--r--. 2 boinc boinc    590101 Nov 23 22:10 input.tar.gz
[2025-11-23 22:21:39] -rw-r--r--. 2 boinc boinc     15847 Nov 23 22:10 start_atlas.sh
[2025-11-23 22:21:39] -rw-------. 1 boinc boinc    204800 Nov 23 22:21 result.tar.gz
22:21:40 (2595973): run_atlas exited; CPU time 91.010396
22:21:40 (2595973): called boinc_finish(0)

</stderr_txt>
]]>

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