Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:10:50 (932676): wrapper (7.7.26015): starting
00:10:50 (932676): wrapper: running run_atlas (--nthreads 8)
[2025-11-24 00:10:50] Arguments: --nthreads 8
[2025-11-24 00:10:50] Threads: 8
[2025-11-24 00:10:50] Checking for CVMFS
[2025-11-24 00:10:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 00:10:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 00:10:51] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 00:10:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 00:10:52] 2.13.2.0 8902 32525 285264 153234 2 297 27890980 40960000 25189 16776704 0 60047583 99.602 62935895 35295 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-24 00:10:52] CVMFS is ok
[2025-11-24 00:10:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 00:10:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 00:10:52] Further information can be found at the LHC@home message board.
[2025-11-24 00:10:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 00:10:52] Checking for apptainer binary...
[2025-11-24 00:10:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 00:10:52] Running /usr/bin/apptainer --version
[2025-11-24 00:10:52] apptainer version 1.4.4-1.el9
[2025-11-24 00:10:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 00:10:53] c-211-35-2.aglt2.org
[2025-11-24 00:10:53] apptainer works
[2025-11-24 00:10:53] Set ATHENA_PROC_NUMBER=8
[2025-11-24 00:10:53] Set ATHENA_CORE_NUMBER=8
[2025-11-24 00:10:54] Starting ATLAS job with PandaID=6895356261
[2025-11-24 00:10:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 21:48:20]  *** The last 200 lines of the pilot log: ***
[2025-11-24 21:48:20] 2025-11-25 02:47:36,484 | INFO     | sum of square deviations: 630640627458.5234
[2025-11-24 21:48:20] 2025-11-25 02:47:36,512 | INFO     | sum of deviations: 5775141275962.625
[2025-11-24 21:48:20] 2025-11-25 02:47:36,512 | INFO     | mean x: 1763999894.1207576
[2025-11-24 21:48:20] 2025-11-25 02:47:36,513 | INFO     | mean y: 2832432.603788477
[2025-11-24 21:48:20] 2025-11-25 02:47:36,513 | INFO     | intersect: -16151135700.38095
[2025-11-24 21:48:20] 2025-11-25 02:47:36,514 | INFO     | chi2: 12.855452369293078
[2025-11-24 21:48:20] 2025-11-25 02:47:36,514 | INFO     | current chi2=12.855452369293078 (change=16.59703846409342 %)
[2025-11-24 21:48:20] 2025-11-25 02:47:36,514 | INFO     | right removable region: 1266
[2025-11-24 21:48:20] 2025-11-25 02:47:36,516 | INFO     | sum of square deviations: 630635124038.5237
[2025-11-24 21:48:20] 2025-11-25 02:47:36,544 | INFO     | sum of deviations: 4891825129853.671
[2025-11-24 21:48:20] 2025-11-25 02:47:36,544 | INFO     | mean x: 1764000199.1207576
[2025-11-24 21:48:20] 2025-11-25 02:47:36,544 | INFO     | mean y: 2835490.7995264404
[2025-11-24 21:48:20] 2025-11-25 02:47:36,544 | INFO     | intersect: -13680481809.805935
[2025-11-24 21:48:20] 2025-11-25 02:47:36,546 | INFO     | chi2: 10.811192006244996
[2025-11-24 21:48:20] 2025-11-25 02:47:36,546 | INFO     | current chi2=10.811192006244996 (change=29.85968870236374 %)
[2025-11-24 21:48:20] 2025-11-25 02:47:36,547 | INFO     | sum of square deviations: 623195200071.4934
[2025-11-24 21:48:20] 2025-11-25 02:47:36,575 | INFO     | sum of deviations: 4444030680794.151
[2025-11-24 21:48:20] 2025-11-25 02:47:36,575 | INFO     | mean x: 1764000351.64897
[2025-11-24 21:48:20] 2025-11-25 02:47:36,575 | INFO     | mean y: 2844671.499207607
[2025-11-24 21:48:20] 2025-11-25 02:47:36,576 | INFO     | intersect: -12576314607.584402
[2025-11-24 21:48:20] 2025-11-25 02:47:36,577 | INFO     | chi2: 7.512964821253821
[2025-11-24 21:48:20] 2025-11-25 02:47:36,577 | INFO     | current chi2=7.512964821253821 (change=30.507525748187447 %)
[2025-11-24 21:48:20] 2025-11-25 02:47:36,579 | INFO     | sum of square deviations: 615813974877.437
[2025-11-24 21:48:20] 2025-11-25 02:47:36,606 | INFO     | sum of deviations: 3998323428255.627
[2025-11-24 21:48:20] 2025-11-25 02:47:36,607 | INFO     | mean x: 1764000504.1774065
[2025-11-24 21:48:20] 2025-11-25 02:47:36,607 | INFO     | mean y: 2853879.7684964202
[2025-11-24 21:48:20] 2025-11-25 02:47:36,607 | INFO     | intersect: -11450352495.924751
[2025-11-24 21:48:20] 2025-11-25 02:47:36,610 | INFO     | chi2: 4.282139847026158
[2025-11-24 21:48:20] 2025-11-25 02:47:36,610 | INFO     | current chi2=4.282139847026158 (change=43.003328926655065 %)
[2025-11-24 21:48:20] 2025-11-25 02:47:36,612 | INFO     | sum of square deviations: 608491215893.8348
[2025-11-24 21:48:20] 2025-11-25 02:47:36,663 | INFO     | sum of deviations: 3698875369816.7593
[2025-11-24 21:48:20] 2025-11-25 02:47:36,663 | INFO     | mean x: 1764000656.7060702
[2025-11-24 21:48:20] 2025-11-25 02:47:36,663 | INFO     | mean y: 2860116.004792332
[2025-11-24 21:48:20] 2025-11-25 02:47:36,663 | INFO     | intersect: -10720086100.80481
[2025-11-24 21:48:20] 2025-11-25 02:47:36,665 | INFO     | chi2: 3.001861571817522
[2025-11-24 21:48:20] 2025-11-25 02:47:36,665 | INFO     | current chi2=3.001861571817522 (change=29.898095833973237 %)
[2025-11-24 21:48:20] 2025-11-25 02:47:36,667 | INFO     | sum of square deviations: 601229441548.0328
[2025-11-24 21:48:20] 2025-11-25 02:47:36,695 | INFO     | sum of deviations: 3590942112897.6553
[2025-11-24 21:48:20] 2025-11-25 02:47:36,695 | INFO     | mean x: 1764000809.2060947
[2025-11-24 21:48:20] 2025-11-25 02:47:36,696 | INFO     | mean y: 2862382.4137931033
[2025-11-24 21:48:20] 2025-11-25 02:47:36,696 | INFO     | intersect: -10532923717.238886
[2025-11-24 21:48:20] 2025-11-25 02:47:36,697 | INFO     | chi2: 2.925000570342317
[2025-11-24 21:48:20] 2025-11-25 02:47:36,697 | INFO     | current chi2=2.925000570342317 (change=2.5604445653590973 %)
[2025-11-24 21:48:20] 2025-11-25 02:47:36,697 | INFO     | left removable region: 50
[2025-11-24 21:48:20] 2025-11-25 02:47:36,699 | INFO     | sum of square deviations: 557498099966.1056
[2025-11-24 21:48:20] 2025-11-25 02:47:36,726 | INFO     | sum of deviations: 3603045340768.3413
[2025-11-24 21:48:20] 2025-11-25 02:47:36,726 | INFO     | mean x: 1764001388.7105262
[2025-11-24 21:48:20] 2025-11-25 02:47:36,726 | INFO     | mean y: 2878682.1373355263
[2025-11-24 21:48:20] 2025-11-25 02:47:36,727 | INFO     | intersect: -11397657005.946194
[2025-11-24 21:48:20] 2025-11-25 02:47:36,728 | INFO     | chi2: 0.12116714400403707
[2025-11-24 21:48:20] 2025-11-25 02:47:36,728 | INFO     | current memory leak: 6.46 B/s (using 1216 data points, chi2=0.12)
[2025-11-24 21:48:20] 2025-11-25 02:47:36,729 | INFO     | could have reported an average CPU frequency of 2614 MHz (46 samples)
[2025-11-24 21:48:20] 2025-11-25 02:47:36,730 | INFO     | ..............................
[2025-11-24 21:48:20] 2025-11-25 02:47:36,730 | INFO     | . Timing measurements:
[2025-11-24 21:48:20] 2025-11-25 02:47:36,730 | INFO     | . get job = 0 s
[2025-11-24 21:48:20] 2025-11-25 02:47:36,730 | INFO     | . initial setup = 5 s
[2025-11-24 21:48:20] 2025-11-25 02:47:36,730 | INFO     | . payload setup = 58 s
[2025-11-24 21:48:20] 2025-11-25 02:47:36,730 | INFO     | . stage-in = 0 s
[2025-11-24 21:48:20] 2025-11-25 02:47:36,730 | INFO     | . payload execution = 77598 s
[2025-11-24 21:48:20] 2025-11-25 02:47:36,730 | INFO     | . stage-out = 3 s
[2025-11-24 21:48:20] 2025-11-25 02:47:36,730 | INFO     | . log creation = 0 s
[2025-11-24 21:48:20] 2025-11-25 02:47:36,730 | INFO     | ..............................
[2025-11-24 21:48:20] 2025-11-25 02:47:36,834 | INFO     | 
[2025-11-24 21:48:20] 2025-11-25 02:47:36,834 | INFO     | job summary report
[2025-11-24 21:48:20] 2025-11-25 02:47:36,834 | INFO     | --------------------------------------------------
[2025-11-24 21:48:20] 2025-11-25 02:47:36,834 | INFO     | PanDA job id: 6895356261
[2025-11-24 21:48:20] 2025-11-25 02:47:36,834 | INFO     | task id: 47556137
[2025-11-24 21:48:20] 2025-11-25 02:47:36,834 | INFO     | errors: (none)
[2025-11-24 21:48:20] 2025-11-25 02:47:36,834 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 21:48:20] 2025-11-25 02:47:36,835 | INFO     | pilot state: finished 
[2025-11-24 21:48:20] 2025-11-25 02:47:36,835 | INFO     | transexitcode: 0
[2025-11-24 21:48:20] 2025-11-25 02:47:36,835 | INFO     | exeerrorcode: 0
[2025-11-24 21:48:20] 2025-11-25 02:47:36,835 | INFO     | exeerrordiag: 
[2025-11-24 21:48:20] 2025-11-25 02:47:36,835 | INFO     | exitcode: 0
[2025-11-24 21:48:20] 2025-11-25 02:47:36,835 | INFO     | exitmsg: OK
[2025-11-24 21:48:20] 2025-11-25 02:47:36,835 | INFO     | cpuconsumptiontime: 261696 s
[2025-11-24 21:48:20] 2025-11-25 02:47:36,835 | INFO     | nevents: 1000
[2025-11-24 21:48:20] 2025-11-25 02:47:36,835 | INFO     | neventsw: 0
[2025-11-24 21:48:20] 2025-11-25 02:47:36,835 | INFO     | pid: 969004
[2025-11-24 21:48:20] 2025-11-25 02:47:36,835 | INFO     | pgrp: 969004
[2025-11-24 21:48:20] 2025-11-25 02:47:36,835 | INFO     | corecount: 8
[2025-11-24 21:48:20] 2025-11-25 02:47:36,835 | INFO     | event service: False
[2025-11-24 21:48:20] 2025-11-25 02:47:36,835 | INFO     | sizes: {0: 2298635, 1: 2298834, 2: 2298834, 13: 2298862, 24: 2298918, 32: 2299208, 35: 2299364, 77659: 2359556, 77660: 2359555, 77664: 2369396, 77667: 2369452, 776
[2025-11-24 21:48:20] 2025-11-25 02:47:36,836 | INFO     | --------------------------------------------------
[2025-11-24 21:48:20] 2025-11-25 02:47:36,836 | INFO     | 
[2025-11-24 21:48:20] 2025-11-25 02:47:36,836 | INFO     | executing command: ls -lF /tmp/boinchome/slots/8
[2025-11-24 21:48:20] 2025-11-25 02:47:36,874 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 21:48:20] 2025-11-25 02:47:36,883 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 21:48:20] 2025-11-25 02:47:36,885 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 21:48:20] 2025-11-25 02:47:36,885 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 21:48:20] 2025-11-25 02:47:36,885 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 21:48:20] 2025-11-25 02:47:36,885 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 21:48:20] 2025-11-25 02:47:36,885 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 21:48:20] 2025-11-25 02:47:36,886 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 21:48:20] 2025-11-25 02:47:36,886 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 21:48:20] 2025-11-25 02:47:36,886 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 21:48:20] 2025-11-25 02:47:36,886 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 21:48:20] 2025-11-25 02:47:36,886 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 21:48:20] 2025-11-25 02:47:36,886 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 21:48:20] 2025-11-25 02:47:36,886 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 21:48:20] 2025-11-25 02:47:36,886 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 21:48:20] 2025-11-25 02:47:36,886 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 21:48:20] 2025-11-25 02:47:36,886 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 21:48:20] 2025-11-25 02:47:36,886 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 21:48:20] 2025-11-25 02:47:36,886 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 21:48:20] 2025-11-25 02:47:36,886 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 21:48:20] 2025-11-25 02:47:36,887 | INFO     | job 6895356261 has completed (purged errors)
[2025-11-24 21:48:20] 2025-11-25 02:47:36,887 | INFO     | overall cleanup function is called
[2025-11-24 21:48:20] 2025-11-25 02:47:37,311 | INFO     | PID=939752 has CPU usage=16.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-24 21:48:20] 2025-11-25 02:47:37,311 | INFO     | .. there are 23 such processes running
[2025-11-24 21:48:20] 2025-11-25 02:47:37,914 | INFO     | --- collectZombieJob: --- 10, [969004]
[2025-11-24 21:48:20] 2025-11-25 02:47:37,915 | INFO     | zombie collector waiting for pid 969004
[2025-11-24 21:48:20] 2025-11-25 02:47:37,915 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 21:48:20] 2025-11-25 02:47:37,915 | INFO     | collected zombie processes
[2025-11-24 21:48:20] 2025-11-25 02:47:37,915 | INFO     | will attempt to kill all subprocesses of pid=969004
[2025-11-24 21:48:20] 2025-11-25 02:47:38,248 | INFO     | process IDs to be killed: [969004] (in reverse order)
[2025-11-24 21:48:20] 2025-11-25 02:47:38,361 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 21:48:20] 2025-11-25 02:47:38,362 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 21:48:20] 2025-11-25 02:47:38,379 | INFO     | did not find any defunct processes belonging to 969004
[2025-11-24 21:48:20] 2025-11-25 02:47:38,394 | INFO     | did not find any defunct processes belonging to 969004
[2025-11-24 21:48:20] 2025-11-25 02:47:38,395 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 21:48:20] 2025-11-25 02:47:38,395 | INFO     | ready for new job
[2025-11-24 21:48:20] 2025-11-25 02:47:38,396 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 21:48:20] 2025-11-25 02:47:38,402 | INFO     | ***************************************
[2025-11-24 21:48:20] 2025-11-25 02:47:38,402 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 21:48:20] 2025-11-25 02:47:38,402 | INFO     | ***************************************
[2025-11-24 21:48:20] 2025-11-25 02:47:38,402 | INFO     | 
[2025-11-24 21:48:20] 2025-11-25 02:47:38,408 | INFO     | architecture information:
[2025-11-24 21:48:20] 2025-11-25 02:47:38,408 | INFO     | executing command: cat /etc/os-release
[2025-11-24 21:48:20] 2025-11-25 02:47:38,424 | INFO     | cat /etc/os-release:
[2025-11-24 21:48:20] NAME="CentOS Linux"
[2025-11-24 21:48:20] VERSION="7 (Core)"
[2025-11-24 21:48:20] ID="centos"
[2025-11-24 21:48:20] ID_LIKE="rhel fedora"
[2025-11-24 21:48:20] VERSION_ID="7"
[2025-11-24 21:48:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 21:48:20] ANSI_COLOR="0;31"
[2025-11-24 21:48:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 21:48:20] HOME_URL="https://www.centos.org/"
[2025-11-24 21:48:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 21:48:20] 
[2025-11-24 21:48:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 21:48:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 21:48:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 21:48:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 21:48:20] 
[2025-11-24 21:48:20] 2025-11-25 02:47:38,424 | INFO     | ***************************************
[2025-11-24 21:48:20] 2025-11-25 02:47:38,928 | INFO     | executing command: df -mP /tmp/boinchome/slots/8
[2025-11-24 21:48:20] 2025-11-25 02:47:38,950 | INFO     | sufficient remaining disk space (124035006464 B)
[2025-11-24 21:48:20] 2025-11-25 02:47:38,951 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 21:48:20] 2025-11-25 02:47:38,951 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 21:48:20] 2025-11-25 02:47:38,951 | INFO     | update_server=False
[2025-11-24 21:48:20] 2025-11-25 02:47:38,951 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 21:48:20] 2025-11-25 02:47:38,951 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 21:48:20] 2025-11-25 02:47:38,951 | INFO     | aborting loop
[2025-11-24 21:48:20] 2025-11-25 02:47:39,116 | INFO     | all payload control threads have been joined
[2025-11-24 21:48:20] 2025-11-25 02:47:39,396 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 21:48:20] 2025-11-25 02:47:39,441 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 21:48:20] 2025-11-25 02:47:39,964 | INFO     | [job] retrieve thread has finished
[2025-11-24 21:48:20] 2025-11-25 02:47:39,965 | INFO     | [job] job monitor thread has finished
[2025-11-24 21:48:20] 2025-11-25 02:47:39,967 | INFO     | all data control threads have been joined
[2025-11-24 21:48:20] 2025-11-25 02:47:40,100 | INFO     | [payload] failed_post thread has finished
[2025-11-24 21:48:20] 2025-11-25 02:47:40,126 | INFO     | [payload] control thread has finished
[2025-11-24 21:48:20] 2025-11-25 02:47:40,303 | INFO     | [payload] validate_post thread has finished
[2025-11-24 21:48:20] 2025-11-25 02:47:40,304 | INFO     | all job control threads have been joined
[2025-11-24 21:48:20] 2025-11-25 02:47:40,357 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 21:48:20] 2025-11-25 02:47:40,691 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 21:48:20] 2025-11-25 02:47:40,725 | INFO     | [job] validate thread has finished
[2025-11-24 21:48:20] 2025-11-25 02:47:40,753 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 21:48:20] 2025-11-25 02:47:40,973 | INFO     | [data] control thread has finished
[2025-11-24 21:48:20] 2025-11-25 02:47:41,155 | INFO     | [data] copytool_in thread has finished
[2025-11-24 21:48:20] 2025-11-25 02:47:41,311 | INFO     | [job] control thread has finished
[2025-11-24 21:48:20] 2025-11-25 02:47:41,374 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 21:48:20] 2025-11-25 02:47:41,449 | INFO     | [data] copytool_out thread has finished
[2025-11-24 21:48:20] 2025-11-25 02:47:41,851 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 21:48:20] 2025-11-25 02:47:42,857 | INFO     | [job] queue monitor thread has finished
[2025-11-24 21:48:20] 2025-11-25 02:47:43,409 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 21:48:20] 2025-11-25 02:48:09,901 | INFO     | PID=939752 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-24 21:48:20] 2025-11-25 02:48:09,901 | INFO     | .. there are 23 such processes running
[2025-11-24 21:48:20] 2025-11-25 02:48:09,902 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 21:48:20] 2025-11-25 02:48:09,902 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 21:48:20] 2025-11-25 02:48:09,902 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 21:48:20] 2025-11-25 02:48:14,631 | INFO     | [monitor] cgroup control has ended
[2025-11-24 21:48:20] 2025-11-25 02:48:14,657 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139996880836416)>', '<ExcThread(monitor, started 139996245772032)>']
[2025-11-24 21:48:20] 2025-11-25 02:48:14,930 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 21:48:20] 2025-11-25 02:48:14,931 | INFO     | [monitor] control thread has ended
[2025-11-24 21:48:20] 2025-11-25 02:48:19,688 | INFO     | all workflow threads have been joined
[2025-11-24 21:48:20] 2025-11-25 02:48:19,689 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 21:48:20] 2025-11-25 02:48:19,689 | INFO     | traces error code: 0
[2025-11-24 21:48:20] 2025-11-25 02:48:19,689 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 21:48:20] 2025-11-25 02:48:19,849 [wrapper] ==== pilot stdout END ====
[2025-11-24 21:48:20] 2025-11-25 02:48:19,851 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 21:48:20] 2025-11-25 02:48:19,853 [wrapper] pilotpid: 939752
[2025-11-24 21:48:20] 2025-11-25 02:48:19,855 [wrapper] Pilot exit status: 0
[2025-11-24 21:48:20] 2025-11-25 02:48:19,865 [wrapper] pandaids: 6895356261
[2025-11-24 21:48:20] 2025-11-25 02:48:19,931 [wrapper] cleanup supervisor_pilot 3657287 939753
[2025-11-24 21:48:20] 2025-11-25 02:48:19,934 [wrapper] Test setup, not cleaning
[2025-11-24 21:48:20] 2025-11-25 02:48:19,936 [wrapper] apfmon messages muted
[2025-11-24 21:48:20] 2025-11-25 02:48:19,938 [wrapper] ==== wrapper stdout END ====
[2025-11-24 21:48:20] 2025-11-25 02:48:19,940 [wrapper] ==== wrapper stderr END ====
[2025-11-24 21:48:20]  *** Error codes and diagnostics ***
[2025-11-24 21:48:20]     "exeErrorCode": 0,
[2025-11-24 21:48:20]     "exeErrorDiag": "",
[2025-11-24 21:48:20]     "pilotErrorCode": 0,
[2025-11-24 21:48:20]     "pilotErrorDiag": "",
[2025-11-24 21:48:20]  *** Listing of results directory ***
[2025-11-24 21:48:20] total 1321268
[2025-11-24 21:48:20] -rw-r--r--. 1 boincer umatlas    576529 Nov 23 05:16 pilot3.tar.gz
[2025-11-24 21:48:20] -rw-r--r--. 1 boincer umatlas      5112 Nov 23 05:49 queuedata.json
[2025-11-24 21:48:20] -rwx------. 1 boincer umatlas     36292 Nov 23 05:50 runpilot2-wrapper.sh
[2025-11-24 21:48:20] -rw-r--r--. 1 boincer umatlas       100 Nov 24 00:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 21:48:20] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 24 00:10 run_atlas
[2025-11-24 21:48:20] -rw-r--r--. 1 boincer umatlas       105 Nov 24 00:10 job.xml
[2025-11-24 21:48:20] -rw-r--r--. 2 boincer umatlas 406125277 Nov 24 00:10 EVNT.47483658._000693.pool.root.1
[2025-11-24 21:48:20] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 00:10 start_atlas.sh
[2025-11-24 21:48:20] drwxrwx--x. 2 boincer umatlas      4096 Nov 24 00:10 shared
[2025-11-24 21:48:20] -rw-r--r--. 2 boincer umatlas    590094 Nov 24 00:10 input.tar.gz
[2025-11-24 21:48:20] -rw-r--r--. 1 boincer umatlas         0 Nov 24 00:10 boinc_lockfile
[2025-11-24 21:48:20] -rw-r--r--. 1 boincer umatlas      2785 Nov 24 00:10 pandaJob.out
[2025-11-24 21:48:20] -rw-------. 1 boincer umatlas        57 Nov 24 00:10 setup.sh.local
[2025-11-24 21:48:20] -rw-------. 1 boincer umatlas    989786 Nov 24 00:11 agis_schedconf.cvmfs.json
[2025-11-24 21:48:20] drwx------. 5 boincer umatlas      4096 Nov 24 00:11 pilot3
[2025-11-24 21:48:20] -rw-r--r--. 1 boincer umatlas       533 Nov 24 21:39 boinc_task_state.xml
[2025-11-24 21:48:20] -rw-------. 1 boincer umatlas 918901628 Nov 24 21:46 HITS.47556137._006882.pool.root.1
[2025-11-24 21:48:20] -rw-------. 1 boincer umatlas      1061 Nov 24 21:47 memory_monitor_summary.json
[2025-11-24 21:48:20] -rw-------. 1 boincer umatlas   1516227 Nov 24 21:47 agis_ddmendpoints.agis.ALL.json
[2025-11-24 21:48:20] -rw-------. 1 boincer umatlas   2347047 Nov 24 21:47 log.47556137._006882.job.log.tgz.1
[2025-11-24 21:48:20] -rw-------. 1 boincer umatlas      8621 Nov 24 21:47 heartbeat.json
[2025-11-24 21:48:20] -rw-r--r--. 1 boincer umatlas      6878 Nov 24 21:47 init_data.xml
[2025-11-24 21:48:20] -rw-------. 1 boincer umatlas        95 Nov 24 21:48 pilot_heartbeat.json
[2025-11-24 21:48:20] -rw-r--r--. 1 boincer umatlas      8192 Nov 24 21:48 boinc_mmap_file
[2025-11-24 21:48:20] -rw-r--r--. 1 boincer umatlas        29 Nov 24 21:48 wrapper_checkpoint.txt
[2025-11-24 21:48:20] -rw-------. 1 boincer umatlas      4824 Nov 24 21:48 pilotlog.txt
[2025-11-24 21:48:20] -rw-------. 1 boincer umatlas   9669992 Nov 24 21:48 log.47556137._006882.job.log.1
[2025-11-24 21:48:20] -rw-------. 1 boincer umatlas       353 Nov 24 21:48 output.list
[2025-11-24 21:48:20] -rw-r--r--. 1 boincer umatlas       620 Nov 24 21:48 runtime_log
[2025-11-24 21:48:20] -rw-------. 1 boincer umatlas  12032000 Nov 24 21:48 result.tar.gz
[2025-11-24 21:48:20] -rw-r--r--. 1 boincer umatlas      9353 Nov 24 21:48 runtime_log.err
[2025-11-24 21:48:20] -rw-------. 1 boincer umatlas       662 Nov 24 21:48 n4aKDm1qMh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmTVIKDmEnBUfn.diag
[2025-11-24 21:48:20] -rw-r--r--. 1 boincer umatlas     21316 Nov 24 21:48 stderr.txt
[2025-11-24 21:48:20] HITS file was successfully produced:
[2025-11-24 21:48:20] -rw-------. 1 boincer umatlas 918901628 Nov 24 21:46 shared/HITS.pool.root.1
[2025-11-24 21:48:20]  *** Contents of shared directory: ***
[2025-11-24 21:48:20] total 1306332
[2025-11-24 21:48:20] -rw-r--r--. 2 boincer umatlas 406125277 Nov 24 00:10 ATLAS.root_0
[2025-11-24 21:48:20] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 00:10 start_atlas.sh
[2025-11-24 21:48:20] -rw-r--r--. 2 boincer umatlas    590094 Nov 24 00:10 input.tar.gz
[2025-11-24 21:48:20] -rw-------. 1 boincer umatlas 918901628 Nov 24 21:46 HITS.pool.root.1
[2025-11-24 21:48:20] -rw-------. 1 boincer umatlas  12032000 Nov 24 21:48 result.tar.gz
21:48:21 (932676): run_atlas exited; CPU time 263857.999736
21:48:21 (932676): called boinc_finish(0)

</stderr_txt>
]]>

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