Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:04:39 (3032656): wrapper (7.7.26015): starting
00:04:39 (3032656): wrapper: running run_atlas (--nthreads 9)
[2025-11-25 00:04:39] Arguments: --nthreads 9
[2025-11-25 00:04:39] Threads: 9
[2025-11-25 00:04:39] Checking for CVMFS
[2025-11-25 00:04:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 00:04:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 00:04:39] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 00:04:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 00:04:39] 2.13.3.0 9863 28032 328860 153270 3 631 31240276 32935936 23206 16776704 0 159761766 99.798 84981987 33500 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 00:04:39] CVMFS is ok
[2025-11-25 00:04:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 00:04:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 00:04:39] Further information can be found at the LHC@home message board.
[2025-11-25 00:04:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 00:04:39] Checking for apptainer binary...
[2025-11-25 00:04:39] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 00:04:39] Running /usr/bin/apptainer --version
[2025-11-25 00:04:39] apptainer version 1.4.4-1.el9
[2025-11-25 00:04:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 00:04:40] c-5-3.aglt2.org
[2025-11-25 00:04:40] apptainer works
[2025-11-25 00:04:40] Set ATHENA_PROC_NUMBER=9
[2025-11-25 00:04:40] Set ATHENA_CORE_NUMBER=9
[2025-11-25 00:04:40] Starting ATLAS job with PandaID=6895356410
[2025-11-25 00:04:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 10:57:05]  *** The last 200 lines of the pilot log: ***
[2025-11-25 10:57:05] 2025-11-25 15:56:17,314 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 10:57:05] 2025-11-25 15:56:17,733 | INFO     | time since job start (39085s) is within the limit (172800.0s)
[2025-11-25 10:57:05] 2025-11-25 15:56:19,390 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-25 10:57:05] 2025-11-25 15:56:19,396 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.0551750000004
[2025-11-25 10:57:05] 2025-11-25 15:56:19,404 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6895356410/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 10:57:05] 2025-11-25 15:56:19,404 | INFO     | extracted standard info from prmon json
[2025-11-25 10:57:05] 2025-11-25 15:56:19,404 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 10:57:05] 2025-11-25 15:56:19,405 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 10:57:05] 2025-11-25 15:56:19,416 | INFO     | fitting pss+swap vs Time
[2025-11-25 10:57:05] 2025-11-25 15:56:19,417 | INFO     | sum of square deviations: 81667190561.8379
[2025-11-25 10:57:05] 2025-11-25 15:56:19,426 | INFO     | sum of deviations: 1030492255663.9585
[2025-11-25 10:57:05] 2025-11-25 15:56:19,427 | INFO     | mean x: 1764066641.801872
[2025-11-25 10:57:05] 2025-11-25 15:56:19,427 | INFO     | mean y: 3048350.8658346334
[2025-11-25 10:57:05] 2025-11-25 15:56:19,427 | INFO     | intersect: -22256282481.330296
[2025-11-25 10:57:05] 2025-11-25 15:56:19,428 | INFO     | chi2: 5.688602930914429
[2025-11-25 10:57:05] 2025-11-25 15:56:19,429 | INFO     | sum of square deviations: 79771107123.59737
[2025-11-25 10:57:05] 2025-11-25 15:56:19,439 | INFO     | sum of deviations: 1247396380311.3284
[2025-11-25 10:57:05] 2025-11-25 15:56:19,439 | INFO     | mean x: 1764066489.308176
[2025-11-25 10:57:05] 2025-11-25 15:56:19,439 | INFO     | mean y: 3065785.937106918
[2025-11-25 10:57:05] 2025-11-25 15:56:19,440 | INFO     | intersect: -27581986405.730377
[2025-11-25 10:57:05] 2025-11-25 15:56:19,440 | INFO     | chi2: 2.7368845301555353
[2025-11-25 10:57:05] 2025-11-25 15:56:19,441 | INFO     | current chi2=2.7368845301555353 (change=51.888283232389576 %)
[2025-11-25 10:57:05] 2025-11-25 15:56:19,441 | INFO     | sum of square deviations: 77904567083.93353
[2025-11-25 10:57:05] 2025-11-25 15:56:19,451 | INFO     | sum of deviations: 1311692616109.8564
[2025-11-25 10:57:05] 2025-11-25 15:56:19,451 | INFO     | mean x: 1764066336.8129952
[2025-11-25 10:57:05] 2025-11-25 15:56:19,451 | INFO     | mean y: 3071022.4564183834
[2025-11-25 10:57:05] 2025-11-25 15:56:19,451 | INFO     | intersect: -29698817774.80221
[2025-11-25 10:57:05] 2025-11-25 15:56:19,452 | INFO     | chi2: 2.22882103209775
[2025-11-25 10:57:05] 2025-11-25 15:56:19,452 | INFO     | current chi2=2.22882103209775 (change=18.563570821488483 %)
[2025-11-25 10:57:05] 2025-11-25 15:56:19,453 | INFO     | right removable region: 630
[2025-11-25 10:57:05] 2025-11-25 15:56:19,453 | INFO     | sum of square deviations: 79770832441.21223
[2025-11-25 10:57:05] 2025-11-25 15:56:19,464 | INFO     | sum of deviations: 850001280388.7874
[2025-11-25 10:57:05] 2025-11-25 15:56:19,464 | INFO     | mean x: 1764066794.3066037
[2025-11-25 10:57:05] 2025-11-25 15:56:19,464 | INFO     | mean y: 3062836.6933962265
[2025-11-25 10:57:05] 2025-11-25 15:56:19,464 | INFO     | intersect: -18794021109.45942
[2025-11-25 10:57:05] 2025-11-25 15:56:19,465 | INFO     | chi2: 3.612197138731796
[2025-11-25 10:57:05] 2025-11-25 15:56:19,465 | INFO     | current chi2=3.612197138731796 (change=36.50115533461668 %)
[2025-11-25 10:57:05] 2025-11-25 15:56:19,466 | INFO     | sum of square deviations: 77904211701.02351
[2025-11-25 10:57:05] 2025-11-25 15:56:19,475 | INFO     | sum of deviations: 800125543204.374
[2025-11-25 10:57:05] 2025-11-25 15:56:19,476 | INFO     | mean x: 1764066946.8050714
[2025-11-25 10:57:05] 2025-11-25 15:56:19,476 | INFO     | mean y: 3066912.1331220283
[2025-11-25 10:57:05] 2025-11-25 15:56:19,476 | INFO     | intersect: -18115016734.976616
[2025-11-25 10:57:05] 2025-11-25 15:56:19,477 | INFO     | chi2: 3.562085527842891
[2025-11-25 10:57:05] 2025-11-25 15:56:19,477 | INFO     | current chi2=3.562085527842891 (change=1.3872889259443544 %)
[2025-11-25 10:57:05] 2025-11-25 15:56:19,477 | INFO     | left removable region: 20
[2025-11-25 10:57:05] 2025-11-25 15:56:19,478 | INFO     | sum of square deviations: 70382292329.9361
[2025-11-25 10:57:05] 2025-11-25 15:56:19,486 | INFO     | sum of deviations: 1000668538296.2871
[2025-11-25 10:57:05] 2025-11-25 15:56:19,487 | INFO     | mean x: 1764066916.3163934
[2025-11-25 10:57:05] 2025-11-25 15:56:19,487 | INFO     | mean y: 3096203.2213114756
[2025-11-25 10:57:05] 2025-11-25 15:56:19,487 | INFO     | intersect: -25077733138.512733
[2025-11-25 10:57:05] 2025-11-25 15:56:19,488 | INFO     | chi2: 0.053574578473717896
[2025-11-25 10:57:05] 2025-11-25 15:56:19,488 | INFO     | current memory leak: 14.22 B/s (using 610 data points, chi2=0.05)
[2025-11-25 10:57:05] 2025-11-25 15:56:19,489 | INFO     | could have reported an average CPU frequency of 2600 MHz (25 samples)
[2025-11-25 10:57:05] 2025-11-25 15:56:19,489 | INFO     | ..............................
[2025-11-25 10:57:05] 2025-11-25 15:56:19,489 | INFO     | . Timing measurements:
[2025-11-25 10:57:05] 2025-11-25 15:56:19,489 | INFO     | . get job = 0 s
[2025-11-25 10:57:05] 2025-11-25 15:56:19,490 | INFO     | . initial setup = 2 s
[2025-11-25 10:57:05] 2025-11-25 15:56:19,490 | INFO     | . payload setup = 6 s
[2025-11-25 10:57:05] 2025-11-25 15:56:19,490 | INFO     | . stage-in = 0 s
[2025-11-25 10:57:05] 2025-11-25 15:56:19,490 | INFO     | . payload execution = 39050 s
[2025-11-25 10:57:05] 2025-11-25 15:56:19,490 | INFO     | . stage-out = 3 s
[2025-11-25 10:57:05] 2025-11-25 15:56:19,490 | INFO     | . log creation = 0 s
[2025-11-25 10:57:05] 2025-11-25 15:56:19,490 | INFO     | ..............................
[2025-11-25 10:57:05] 2025-11-25 15:56:19,588 | INFO     | 
[2025-11-25 10:57:05] 2025-11-25 15:56:19,588 | INFO     | job summary report
[2025-11-25 10:57:05] 2025-11-25 15:56:19,588 | INFO     | --------------------------------------------------
[2025-11-25 10:57:05] 2025-11-25 15:56:19,588 | INFO     | PanDA job id: 6895356410
[2025-11-25 10:57:05] 2025-11-25 15:56:19,588 | INFO     | task id: 47556137
[2025-11-25 10:57:05] 2025-11-25 15:56:19,588 | INFO     | errors: (none)
[2025-11-25 10:57:05] 2025-11-25 15:56:19,589 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 10:57:05] 2025-11-25 15:56:19,589 | INFO     | pilot state: finished 
[2025-11-25 10:57:05] 2025-11-25 15:56:19,589 | INFO     | transexitcode: 0
[2025-11-25 10:57:05] 2025-11-25 15:56:19,589 | INFO     | exeerrorcode: 0
[2025-11-25 10:57:05] 2025-11-25 15:56:19,589 | INFO     | exeerrordiag: 
[2025-11-25 10:57:05] 2025-11-25 15:56:19,589 | INFO     | exitcode: 0
[2025-11-25 10:57:05] 2025-11-25 15:56:19,589 | INFO     | exitmsg: OK
[2025-11-25 10:57:05] 2025-11-25 15:56:19,589 | INFO     | cpuconsumptiontime: 299328 s
[2025-11-25 10:57:05] 2025-11-25 15:56:19,589 | INFO     | nevents: 1000
[2025-11-25 10:57:05] 2025-11-25 15:56:19,589 | INFO     | neventsw: 0
[2025-11-25 10:57:05] 2025-11-25 15:56:19,589 | INFO     | pid: 3043373
[2025-11-25 10:57:05] 2025-11-25 15:56:19,589 | INFO     | pgrp: 3043373
[2025-11-25 10:57:05] 2025-11-25 15:56:19,589 | INFO     | corecount: 9
[2025-11-25 10:57:05] 2025-11-25 15:56:19,589 | INFO     | event service: False
[2025-11-25 10:57:05] 2025-11-25 15:56:19,589 | INFO     | sizes: {0: 2283431, 1: 2284287, 2: 2284287, 6: 2284577, 12: 2284605, 39061: 2328592, 39065: 2337647, 39070: 2337901}
[2025-11-25 10:57:05] 2025-11-25 15:56:19,589 | INFO     | --------------------------------------------------
[2025-11-25 10:57:05] 2025-11-25 15:56:19,589 | INFO     | 
[2025-11-25 10:57:05] 2025-11-25 15:56:19,590 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-25 10:57:05] 2025-11-25 15:56:19,607 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 10:57:05] 2025-11-25 15:56:19,607 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 10:57:05] 2025-11-25 15:56:19,607 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 10:57:05] 2025-11-25 15:56:19,608 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 10:57:05] 2025-11-25 15:56:19,608 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 10:57:05] 2025-11-25 15:56:19,608 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 10:57:05] 2025-11-25 15:56:19,608 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 10:57:05] 2025-11-25 15:56:19,608 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 10:57:05] 2025-11-25 15:56:19,608 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 10:57:05] 2025-11-25 15:56:19,608 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 10:57:05] 2025-11-25 15:56:19,608 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 10:57:05] 2025-11-25 15:56:19,608 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 10:57:05] 2025-11-25 15:56:19,609 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 10:57:05] 2025-11-25 15:56:19,609 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 10:57:05] 2025-11-25 15:56:19,609 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 10:57:05] 2025-11-25 15:56:19,609 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 10:57:05] 2025-11-25 15:56:19,609 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 10:57:05] 2025-11-25 15:56:19,609 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 10:57:05] 2025-11-25 15:56:19,609 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 10:57:05] 2025-11-25 15:56:19,609 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 10:57:05] 2025-11-25 15:56:19,610 | INFO     | job 6895356410 has completed (purged errors)
[2025-11-25 10:57:05] 2025-11-25 15:56:19,610 | INFO     | overall cleanup function is called
[2025-11-25 10:57:05] 2025-11-25 15:56:20,626 | INFO     | --- collectZombieJob: --- 10, [3043373]
[2025-11-25 10:57:05] 2025-11-25 15:56:20,626 | INFO     | zombie collector waiting for pid 3043373
[2025-11-25 10:57:05] 2025-11-25 15:56:20,626 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 10:57:05] 2025-11-25 15:56:20,627 | INFO     | collected zombie processes
[2025-11-25 10:57:05] 2025-11-25 15:56:20,627 | INFO     | will attempt to kill all subprocesses of pid=3043373
[2025-11-25 10:57:05] 2025-11-25 15:56:21,058 | INFO     | process IDs to be killed: [3043373] (in reverse order)
[2025-11-25 10:57:05] 2025-11-25 15:56:21,195 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 10:57:05] 2025-11-25 15:56:21,195 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 10:57:05] 2025-11-25 15:56:21,211 | INFO     | did not find any defunct processes belonging to 3043373
[2025-11-25 10:57:05] 2025-11-25 15:56:21,224 | INFO     | did not find any defunct processes belonging to 3043373
[2025-11-25 10:57:05] 2025-11-25 15:56:21,225 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 10:57:05] 2025-11-25 15:56:21,225 | INFO     | ready for new job
[2025-11-25 10:57:05] 2025-11-25 15:56:21,225 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 10:57:05] 2025-11-25 15:56:21,227 | INFO     | ***************************************
[2025-11-25 10:57:05] 2025-11-25 15:56:21,228 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 10:57:05] 2025-11-25 15:56:21,228 | INFO     | ***************************************
[2025-11-25 10:57:05] 2025-11-25 15:56:21,228 | INFO     | 
[2025-11-25 10:57:05] 2025-11-25 15:56:21,229 | INFO     | architecture information:
[2025-11-25 10:57:05] 2025-11-25 15:56:21,230 | INFO     | executing command: cat /etc/os-release
[2025-11-25 10:57:05] 2025-11-25 15:56:21,239 | INFO     | cat /etc/os-release:
[2025-11-25 10:57:05] NAME="CentOS Linux"
[2025-11-25 10:57:05] VERSION="7 (Core)"
[2025-11-25 10:57:05] ID="centos"
[2025-11-25 10:57:05] ID_LIKE="rhel fedora"
[2025-11-25 10:57:05] VERSION_ID="7"
[2025-11-25 10:57:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 10:57:05] ANSI_COLOR="0;31"
[2025-11-25 10:57:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 10:57:05] HOME_URL="https://www.centos.org/"
[2025-11-25 10:57:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 10:57:05] 
[2025-11-25 10:57:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 10:57:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 10:57:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 10:57:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 10:57:05] 
[2025-11-25 10:57:05] 2025-11-25 15:56:21,240 | INFO     | ***************************************
[2025-11-25 10:57:05] 2025-11-25 15:56:21,742 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-25 10:57:05] 2025-11-25 15:56:21,760 | INFO     | sufficient remaining disk space (72333918208 B)
[2025-11-25 10:57:05] 2025-11-25 15:56:21,760 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 10:57:05] 2025-11-25 15:56:21,760 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 10:57:05] 2025-11-25 15:56:21,761 | INFO     | update_server=False
[2025-11-25 10:57:05] 2025-11-25 15:56:21,761 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 10:57:05] 2025-11-25 15:56:21,761 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 10:57:05] 2025-11-25 15:56:21,761 | INFO     | aborting loop
[2025-11-25 10:57:05] 2025-11-25 15:56:21,774 | INFO     | all job control threads have been joined
[2025-11-25 10:57:05] 2025-11-25 15:56:21,967 | INFO     | all payload control threads have been joined
[2025-11-25 10:57:05] 2025-11-25 15:56:21,992 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 10:57:05] 2025-11-25 15:56:22,276 | INFO     | all data control threads have been joined
[2025-11-25 10:57:05] 2025-11-25 15:56:22,764 | INFO     | [job] retrieve thread has finished
[2025-11-25 10:57:05] 2025-11-25 15:56:22,767 | INFO     | [job] job monitor thread has finished
[2025-11-25 10:57:05] 2025-11-25 15:56:22,777 | INFO     | [job] control thread has finished
[2025-11-25 10:57:05] 2025-11-25 15:56:22,972 | INFO     | [payload] control thread has finished
[2025-11-25 10:57:05] 2025-11-25 15:56:23,095 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 10:57:05] 2025-11-25 15:56:23,105 | INFO     | [data] copytool_in thread has finished
[2025-11-25 10:57:05] 2025-11-25 15:56:23,275 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 10:57:05] 2025-11-25 15:56:23,282 | INFO     | [data] control thread has finished
[2025-11-25 10:57:05] 2025-11-25 15:56:23,364 | INFO     | [job] validate thread has finished
[2025-11-25 10:57:05] 2025-11-25 15:56:23,789 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 10:57:05] 2025-11-25 15:56:23,967 | INFO     | [payload] validate_post thread has finished
[2025-11-25 10:57:05] 2025-11-25 15:56:23,997 | INFO     | [data] copytool_out thread has finished
[2025-11-25 10:57:05] 2025-11-25 15:56:24,314 | INFO     | [payload] failed_post thread has finished
[2025-11-25 10:57:05] 2025-11-25 15:56:24,597 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 10:57:05] 2025-11-25 15:56:24,835 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 10:57:05] 2025-11-25 15:56:25,602 | INFO     | [job] queue monitor thread has finished
[2025-11-25 10:57:05] 2025-11-25 15:56:28,841 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 10:57:05] 2025-11-25 15:56:32,657 | INFO     | job.realtimelogging is not enabled
[2025-11-25 10:57:05] 2025-11-25 15:56:33,662 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 10:57:05] 2025-11-25 15:56:51,410 | INFO     | PID=3036831 has CPU usage=10.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-11-25 10:57:05] 2025-11-25 15:56:51,411 | INFO     | .. there are 41 such processes running
[2025-11-25 10:57:05] 2025-11-25 15:56:51,412 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 10:57:05] 2025-11-25 15:56:51,412 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 10:57:05] 2025-11-25 15:56:51,412 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 10:57:05] 2025-11-25 15:56:59,490 | INFO     | [monitor] cgroup control has ended
[2025-11-25 10:57:05] 2025-11-25 15:57:00,338 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139757014464320)>', '<ExcThread(monitor, started 139756507731712)>']
[2025-11-25 10:57:05] 2025-11-25 15:57:00,457 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 10:57:05] 2025-11-25 15:57:00,458 | INFO     | [monitor] control thread has ended
[2025-11-25 10:57:05] 2025-11-25 15:57:05,363 | INFO     | all workflow threads have been joined
[2025-11-25 10:57:05] 2025-11-25 15:57:05,363 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 10:57:05] 2025-11-25 15:57:05,364 | INFO     | traces error code: 0
[2025-11-25 10:57:05] 2025-11-25 15:57:05,364 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 10:57:05] 2025-11-25 15:57:05,497 [wrapper] ==== pilot stdout END ====
[2025-11-25 10:57:05] 2025-11-25 15:57:05,500 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 10:57:05] 2025-11-25 15:57:05,503 [wrapper] pilotpid: 3036831
[2025-11-25 10:57:05] 2025-11-25 15:57:05,506 [wrapper] Pilot exit status: 0
[2025-11-25 10:57:05] 2025-11-25 15:57:05,517 [wrapper] pandaids: 6895356410
[2025-11-25 10:57:05] 2025-11-25 15:57:05,600 [wrapper] cleanup supervisor_pilot  936358 3036832
[2025-11-25 10:57:05] 2025-11-25 15:57:05,604 [wrapper] Test setup, not cleaning
[2025-11-25 10:57:05] 2025-11-25 15:57:05,606 [wrapper] apfmon messages muted
[2025-11-25 10:57:05] 2025-11-25 15:57:05,609 [wrapper] ==== wrapper stdout END ====
[2025-11-25 10:57:05] 2025-11-25 15:57:05,612 [wrapper] ==== wrapper stderr END ====
[2025-11-25 10:57:05]  *** Error codes and diagnostics ***
[2025-11-25 10:57:05]     "exeErrorCode": 0,
[2025-11-25 10:57:05]     "exeErrorDiag": "",
[2025-11-25 10:57:05]     "pilotErrorCode": 0,
[2025-11-25 10:57:05]     "pilotErrorDiag": "",
[2025-11-25 10:57:05]  *** Listing of results directory ***
[2025-11-25 10:57:05] total 1318652
[2025-11-25 10:57:05] -rw-r--r--. 1 boincer umatlas    576529 Nov 23 05:16 pilot3.tar.gz
[2025-11-25 10:57:05] -rw-r--r--. 1 boincer umatlas      5112 Nov 23 06:02 queuedata.json
[2025-11-25 10:57:05] -rwx------. 1 boincer umatlas     36292 Nov 23 06:02 runpilot2-wrapper.sh
[2025-11-25 10:57:05] -rw-r--r--. 1 boincer umatlas       100 Nov 25 00:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 10:57:05] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 00:04 run_atlas
[2025-11-25 10:57:05] -rw-r--r--. 1 boincer umatlas       105 Nov 25 00:04 job.xml
[2025-11-25 10:57:05] -rw-r--r--. 2 boincer umatlas 409415327 Nov 25 00:04 EVNT.47483658._000698.pool.root.1
[2025-11-25 10:57:05] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 00:04 start_atlas.sh
[2025-11-25 10:57:05] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 00:04 shared
[2025-11-25 10:57:05] -rw-r--r--. 2 boincer umatlas    590105 Nov 25 00:04 input.tar.gz
[2025-11-25 10:57:05] -rw-r--r--. 1 boincer umatlas         0 Nov 25 00:04 boinc_lockfile
[2025-11-25 10:57:05] -rw-r--r--. 1 boincer umatlas      2785 Nov 25 00:04 pandaJob.out
[2025-11-25 10:57:05] -rw-------. 1 boincer umatlas        57 Nov 25 00:04 setup.sh.local
[2025-11-25 10:57:05] -rw-------. 1 boincer umatlas    991801 Nov 25 00:04 agis_schedconf.cvmfs.json
[2025-11-25 10:57:05] drwx------. 5 boincer umatlas      4096 Nov 25 00:04 pilot3
[2025-11-25 10:57:05] -rw-r--r--. 1 boincer umatlas       533 Nov 25 10:46 boinc_task_state.xml
[2025-11-25 10:57:05] -rw-r--r--. 1 boincer umatlas      6706 Nov 25 10:48 init_data.xml
[2025-11-25 10:57:05] -rw-------. 1 boincer umatlas 922137713 Nov 25 10:55 HITS.47556137._006940.pool.root.1
[2025-11-25 10:57:05] -rw-------. 1 boincer umatlas      1058 Nov 25 10:56 memory_monitor_summary.json
[2025-11-25 10:57:05] -rw-------. 1 boincer umatlas   1516240 Nov 25 10:56 agis_ddmendpoints.agis.ALL.json
[2025-11-25 10:57:05] -rw-------. 1 boincer umatlas   2035088 Nov 25 10:56 log.47556137._006940.job.log.tgz.1
[2025-11-25 10:57:05] -rw-------. 1 boincer umatlas      8617 Nov 25 10:56 heartbeat.json
[2025-11-25 10:57:05] -rw-------. 1 boincer umatlas        95 Nov 25 10:56 pilot_heartbeat.json
[2025-11-25 10:57:05] -rw-r--r--. 1 boincer umatlas        29 Nov 25 10:57 wrapper_checkpoint.txt
[2025-11-25 10:57:05] -rw-------. 1 boincer umatlas      4897 Nov 25 10:57 pilotlog.txt
[2025-11-25 10:57:05] -rw-r--r--. 1 boincer umatlas      8192 Nov 25 10:57 boinc_mmap_file
[2025-11-25 10:57:05] -rw-------. 1 boincer umatlas   5381634 Nov 25 10:57 log.47556137._006940.job.log.1
[2025-11-25 10:57:05] -rw-------. 1 boincer umatlas       353 Nov 25 10:57 output.list
[2025-11-25 10:57:05] -rw-r--r--. 1 boincer umatlas       620 Nov 25 10:57 runtime_log
[2025-11-25 10:57:05] -rw-------. 1 boincer umatlas   7434240 Nov 25 10:57 result.tar.gz
[2025-11-25 10:57:05] -rw-r--r--. 1 boincer umatlas      9328 Nov 25 10:57 runtime_log.err
[2025-11-25 10:57:05] -rw-------. 1 boincer umatlas       657 Nov 25 10:57 AQFNDm32Mh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmroKKDmwZlPzm.diag
[2025-11-25 10:57:05] -rw-r--r--. 1 boincer umatlas     21308 Nov 25 10:57 stderr.txt
[2025-11-25 10:57:05] HITS file was successfully produced:
[2025-11-25 10:57:05] -rw-------. 1 boincer umatlas 922137713 Nov 25 10:55 shared/HITS.pool.root.1
[2025-11-25 10:57:05]  *** Contents of shared directory: ***
[2025-11-25 10:57:05] total 1308208
[2025-11-25 10:57:05] -rw-r--r--. 2 boincer umatlas 409415327 Nov 25 00:04 ATLAS.root_0
[2025-11-25 10:57:05] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 00:04 start_atlas.sh
[2025-11-25 10:57:05] -rw-r--r--. 2 boincer umatlas    590105 Nov 25 00:04 input.tar.gz
[2025-11-25 10:57:05] -rw-------. 1 boincer umatlas 922137713 Nov 25 10:55 HITS.pool.root.1
[2025-11-25 10:57:05] -rw-------. 1 boincer umatlas   7434240 Nov 25 10:57 result.tar.gz
10:57:27 (3032656): run_atlas exited; CPU time 299761.277394
10:57:27 (3032656): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN