Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:20:20 (4184527): wrapper (7.7.26015): starting
10:20:20 (4184527): wrapper: running run_atlas (--nthreads 8)
[2025-11-24 10:20:20] Arguments: --nthreads 8
[2025-11-24 10:20:20] Threads: 8
[2025-11-24 10:20:20] Checking for CVMFS
[2025-11-24 10:20:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 10:20:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 10:20:20] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 10:20:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 10:20:21] 2.13.3.0 15733 25903 342576 153250 3 142 22512811 32935936 26412 16776704 0 137281124 99.713 99754766 26711 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-24 10:20:21] CVMFS is ok
[2025-11-24 10:20:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 10:20:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 10:20:21] Further information can be found at the LHC@home message board.
[2025-11-24 10:20:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 10:20:21] Checking for apptainer binary...
[2025-11-24 10:20:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 10:20:21] Running /usr/bin/apptainer --version
[2025-11-24 10:20:21] apptainer version 1.4.4-1.el9
[2025-11-24 10:20:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 10:20:21] c-8-39.aglt2.org
[2025-11-24 10:20:21] apptainer works
[2025-11-24 10:20:21] Set ATHENA_PROC_NUMBER=8
[2025-11-24 10:20:21] Set ATHENA_CORE_NUMBER=8
[2025-11-24 10:20:21] Starting ATLAS job with PandaID=6895351142
[2025-11-24 10:20:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 09:44:40]  *** The last 200 lines of the pilot log: ***
[2025-11-25 09:44:40] 2025-11-25 14:44:04,448 | INFO     | sum of deviations: 3526049093275.568
[2025-11-25 09:44:40] 2025-11-25 14:44:04,449 | INFO     | mean x: 1764039731.2451053
[2025-11-25 09:44:40] 2025-11-25 14:44:04,449 | INFO     | mean y: 2947453.714285714
[2025-11-25 09:44:40] 2025-11-25 14:44:04,449 | INFO     | intersect: -7646140135.2399645
[2025-11-25 09:44:40] 2025-11-25 14:44:04,451 | INFO     | chi2: 9.09815316662202
[2025-11-25 09:44:40] 2025-11-25 14:44:04,453 | INFO     | sum of square deviations: 804368287689.8738
[2025-11-25 09:44:40] 2025-11-25 14:44:04,535 | INFO     | sum of deviations: 3998076858286.5767
[2025-11-25 09:44:40] 2025-11-25 14:44:04,535 | INFO     | mean x: 1764039578.7496362
[2025-11-25 09:44:40] 2025-11-25 14:44:04,535 | INFO     | mean y: 2955623.1615720526
[2025-11-25 09:44:40] 2025-11-25 14:44:04,535 | INFO     | intersect: -8765124775.87541
[2025-11-25 09:44:40] 2025-11-25 14:44:04,537 | INFO     | chi2: 5.956475629870851
[2025-11-25 09:44:40] 2025-11-25 14:44:04,538 | INFO     | current chi2=5.956475629870851 (change=34.53093698484763 %)
[2025-11-25 09:44:40] 2025-11-25 14:44:04,539 | INFO     | sum of square deviations: 795619744999.5392
[2025-11-25 09:44:40] 2025-11-25 14:44:04,726 | INFO     | sum of deviations: 4353225845294.2886
[2025-11-25 09:44:40] 2025-11-25 14:44:04,726 | INFO     | mean x: 1764039426.2542002
[2025-11-25 09:44:40] 2025-11-25 14:44:04,727 | INFO     | mean y: 2961810.3411249085
[2025-11-25 09:44:40] 2025-11-25 14:44:04,727 | INFO     | intersect: -9648963083.117044
[2025-11-25 09:44:40] 2025-11-25 14:44:04,729 | INFO     | chi2: 3.9588185712233175
[2025-11-25 09:44:40] 2025-11-25 14:44:04,729 | INFO     | current chi2=3.9588185712233175 (change=33.53756789719035 %)
[2025-11-25 09:44:40] 2025-11-25 14:44:04,735 | INFO     | sum of square deviations: 786934710904.676
[2025-11-25 09:44:40] 2025-11-25 14:44:04,944 | INFO     | sum of deviations: 4528558301586.933
[2025-11-25 09:44:40] 2025-11-25 14:44:04,944 | INFO     | mean x: 1764039273.7573314
[2025-11-25 09:44:40] 2025-11-25 14:44:04,944 | INFO     | mean y: 2964886.6312316717
[2025-11-25 09:44:40] 2025-11-25 14:44:04,944 | INFO     | intersect: -10148518567.841558
[2025-11-25 09:44:40] 2025-11-25 14:44:04,974 | INFO     | chi2: 3.3486757757338577
[2025-11-25 09:44:40] 2025-11-25 14:44:04,974 | INFO     | current chi2=3.3486757757338577 (change=15.412244449002854 %)
[2025-11-25 09:44:40] 2025-11-25 14:44:04,974 | INFO     | right removable region: 1363
[2025-11-25 09:44:40] 2025-11-25 14:44:04,976 | INFO     | sum of square deviations: 804367240319.875
[2025-11-25 09:44:40] 2025-11-25 14:44:05,113 | INFO     | sum of deviations: 3053367885605.3223
[2025-11-25 09:44:40] 2025-11-25 14:44:05,117 | INFO     | mean x: 1764039883.7496362
[2025-11-25 09:44:40] 2025-11-25 14:44:05,118 | INFO     | mean y: 2955629.149199418
[2025-11-25 09:44:40] 2025-11-25 14:44:05,118 | INFO     | intersect: -6693317490.857671
[2025-11-25 09:44:40] 2025-11-25 14:44:05,119 | INFO     | chi2: 6.17228449624082
[2025-11-25 09:44:40] 2025-11-25 14:44:05,120 | INFO     | current chi2=6.17228449624082 (change=32.15892958490961 %)
[2025-11-25 09:44:40] 2025-11-25 14:44:05,125 | INFO     | sum of square deviations: 795617985643.5599
[2025-11-25 09:44:40] 2025-11-25 14:44:05,354 | INFO     | sum of deviations: 2955222713290.219
[2025-11-25 09:44:40] 2025-11-25 14:44:05,355 | INFO     | mean x: 1764040036.2512784
[2025-11-25 09:44:40] 2025-11-25 14:44:05,355 | INFO     | mean y: 2957339.5894813733
[2025-11-25 09:44:40] 2025-11-25 14:44:05,355 | INFO     | intersect: -6549347002.884977
[2025-11-25 09:44:40] 2025-11-25 14:44:05,357 | INFO     | chi2: 6.119197186215167
[2025-11-25 09:44:40] 2025-11-25 14:44:05,357 | INFO     | current chi2=6.119197186215167 (change=0.860091754649127 %)
[2025-11-25 09:44:40] 2025-11-25 14:44:05,357 | INFO     | left removable region: 20
[2025-11-25 09:44:40] 2025-11-25 14:44:05,363 | INFO     | sum of square deviations: 751145413332.1014
[2025-11-25 09:44:40] 2025-11-25 14:44:05,450 | INFO     | monitor loop #5088: job 0:6895351142 is in state 'finished'
[2025-11-25 09:44:40] 2025-11-25 14:44:05,451 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 09:44:40] 2025-11-25 14:44:05,541 | INFO     | sum of deviations: 3836751130737.123
[2025-11-25 09:44:40] 2025-11-25 14:44:05,541 | INFO     | mean x: 1764039853.265823
[2025-11-25 09:44:40] 2025-11-25 14:44:05,543 | INFO     | mean y: 2977507.6411020104
[2025-11-25 09:44:40] 2025-11-25 14:44:05,544 | INFO     | intersect: -9007504060.314104
[2025-11-25 09:44:40] 2025-11-25 14:44:05,545 | INFO     | chi2: 0.30368380391275257
[2025-11-25 09:44:40] 2025-11-25 14:44:05,545 | INFO     | current memory leak: 5.11 B/s (using 1343 data points, chi2=0.30)
[2025-11-25 09:44:40] 2025-11-25 14:44:05,547 | INFO     | could have reported an average CPU frequency of 2733 MHz (49 samples)
[2025-11-25 09:44:40] 2025-11-25 14:44:05,547 | INFO     | ..............................
[2025-11-25 09:44:40] 2025-11-25 14:44:05,547 | INFO     | . Timing measurements:
[2025-11-25 09:44:40] 2025-11-25 14:44:05,547 | INFO     | . get job = 0 s
[2025-11-25 09:44:40] 2025-11-25 14:44:05,551 | INFO     | . initial setup = 5 s
[2025-11-25 09:44:40] 2025-11-25 14:44:05,551 | INFO     | . payload setup = 15 s
[2025-11-25 09:44:40] 2025-11-25 14:44:05,552 | INFO     | . stage-in = 0 s
[2025-11-25 09:44:40] 2025-11-25 14:44:05,552 | INFO     | . payload execution = 84125 s
[2025-11-25 09:44:40] 2025-11-25 14:44:05,552 | INFO     | . stage-out = 9 s
[2025-11-25 09:44:40] 2025-11-25 14:44:05,552 | INFO     | . log creation = 2 s
[2025-11-25 09:44:40] 2025-11-25 14:44:05,552 | INFO     | ..............................
[2025-11-25 09:44:40] 2025-11-25 14:44:05,884 | INFO     | 
[2025-11-25 09:44:40] 2025-11-25 14:44:05,884 | INFO     | job summary report
[2025-11-25 09:44:40] 2025-11-25 14:44:05,885 | INFO     | --------------------------------------------------
[2025-11-25 09:44:40] 2025-11-25 14:44:05,885 | INFO     | PanDA job id: 6895351142
[2025-11-25 09:44:40] 2025-11-25 14:44:05,885 | INFO     | task id: 47556137
[2025-11-25 09:44:40] 2025-11-25 14:44:05,885 | INFO     | errors: (none)
[2025-11-25 09:44:40] 2025-11-25 14:44:05,885 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 09:44:40] 2025-11-25 14:44:05,885 | INFO     | pilot state: finished 
[2025-11-25 09:44:40] 2025-11-25 14:44:05,885 | INFO     | transexitcode: 0
[2025-11-25 09:44:40] 2025-11-25 14:44:05,885 | INFO     | exeerrorcode: 0
[2025-11-25 09:44:40] 2025-11-25 14:44:05,885 | INFO     | exeerrordiag: 
[2025-11-25 09:44:40] 2025-11-25 14:44:05,886 | INFO     | exitcode: 0
[2025-11-25 09:44:40] 2025-11-25 14:44:05,886 | INFO     | exitmsg: OK
[2025-11-25 09:44:40] 2025-11-25 14:44:05,886 | INFO     | cpuconsumptiontime: 338597 s
[2025-11-25 09:44:40] 2025-11-25 14:44:05,886 | INFO     | nevents: 1000
[2025-11-25 09:44:40] 2025-11-25 14:44:05,886 | INFO     | neventsw: 0
[2025-11-25 09:44:40] 2025-11-25 14:44:05,886 | INFO     | pid: 1384
[2025-11-25 09:44:40] 2025-11-25 14:44:05,886 | INFO     | pgrp: 1384
[2025-11-25 09:44:40] 2025-11-25 14:44:05,886 | INFO     | corecount: 8
[2025-11-25 09:44:40] 2025-11-25 14:44:05,886 | INFO     | event service: False
[2025-11-25 09:44:40] 2025-11-25 14:44:05,886 | INFO     | sizes: {0: 2284037, 1: 2284236, 11: 2284498, 12: 2284526, 84144: 2348524, 84145: 2348523, 84155: 2357706, 84157: 2357762, 84174: 2358008}
[2025-11-25 09:44:40] 2025-11-25 14:44:05,887 | INFO     | --------------------------------------------------
[2025-11-25 09:44:40] 2025-11-25 14:44:05,887 | INFO     | 
[2025-11-25 09:44:40] 2025-11-25 14:44:05,887 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-25 09:44:40] 2025-11-25 14:44:05,914 | INFO     | PID=4188318 has CPU usage=16.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-11-25 09:44:40] 2025-11-25 14:44:05,915 | INFO     | .. there are 51 such processes running
[2025-11-25 09:44:40] 2025-11-25 14:44:05,916 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 09:44:40] 2025-11-25 14:44:05,916 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 09:44:40] 2025-11-25 14:44:05,916 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 09:44:40] 2025-11-25 14:44:05,916 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 09:44:40] 2025-11-25 14:44:05,916 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 09:44:40] 2025-11-25 14:44:05,916 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 09:44:40] 2025-11-25 14:44:05,916 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 09:44:40] 2025-11-25 14:44:05,917 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 09:44:40] 2025-11-25 14:44:05,917 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 09:44:40] 2025-11-25 14:44:05,917 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 09:44:40] 2025-11-25 14:44:05,917 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 09:44:40] 2025-11-25 14:44:05,917 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 09:44:40] 2025-11-25 14:44:05,917 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 09:44:40] 2025-11-25 14:44:05,917 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 09:44:40] 2025-11-25 14:44:05,917 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 09:44:40] 2025-11-25 14:44:05,917 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 09:44:40] 2025-11-25 14:44:05,917 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 09:44:40] 2025-11-25 14:44:05,918 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 09:44:40] 2025-11-25 14:44:05,918 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 09:44:40] 2025-11-25 14:44:05,918 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 09:44:40] 2025-11-25 14:44:05,918 | INFO     | job 6895351142 has completed (purged errors)
[2025-11-25 09:44:40] 2025-11-25 14:44:05,918 | INFO     | overall cleanup function is called
[2025-11-25 09:44:40] 2025-11-25 14:44:06,953 | INFO     | --- collectZombieJob: --- 10, [1384]
[2025-11-25 09:44:40] 2025-11-25 14:44:06,953 | INFO     | zombie collector waiting for pid 1384
[2025-11-25 09:44:40] 2025-11-25 14:44:06,954 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 09:44:40] 2025-11-25 14:44:06,954 | INFO     | collected zombie processes
[2025-11-25 09:44:40] 2025-11-25 14:44:06,954 | INFO     | will attempt to kill all subprocesses of pid=1384
[2025-11-25 09:44:40] 2025-11-25 14:44:09,999 | INFO     | process IDs to be killed: [1384] (in reverse order)
[2025-11-25 09:44:40] 2025-11-25 14:44:10,360 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 09:44:40] 2025-11-25 14:44:10,361 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 09:44:40] 2025-11-25 14:44:10,395 | INFO     | did not find any defunct processes belonging to 1384
[2025-11-25 09:44:40] 2025-11-25 14:44:10,437 | INFO     | did not find any defunct processes belonging to 1384
[2025-11-25 09:44:40] 2025-11-25 14:44:10,443 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 09:44:40] 2025-11-25 14:44:10,443 | INFO     | ready for new job
[2025-11-25 09:44:40] 2025-11-25 14:44:10,443 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 09:44:40] 2025-11-25 14:44:10,457 | INFO     | ***************************************
[2025-11-25 09:44:40] 2025-11-25 14:44:10,457 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 09:44:40] 2025-11-25 14:44:10,457 | INFO     | ***************************************
[2025-11-25 09:44:40] 2025-11-25 14:44:10,458 | INFO     | 
[2025-11-25 09:44:40] 2025-11-25 14:44:10,460 | INFO     | architecture information:
[2025-11-25 09:44:40] 2025-11-25 14:44:10,468 | INFO     | executing command: cat /etc/os-release
[2025-11-25 09:44:40] 2025-11-25 14:44:10,533 | INFO     | cat /etc/os-release:
[2025-11-25 09:44:40] NAME="CentOS Linux"
[2025-11-25 09:44:40] VERSION="7 (Core)"
[2025-11-25 09:44:40] ID="centos"
[2025-11-25 09:44:40] ID_LIKE="rhel fedora"
[2025-11-25 09:44:40] VERSION_ID="7"
[2025-11-25 09:44:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 09:44:40] ANSI_COLOR="0;31"
[2025-11-25 09:44:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 09:44:40] HOME_URL="https://www.centos.org/"
[2025-11-25 09:44:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 09:44:40] 
[2025-11-25 09:44:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 09:44:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 09:44:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 09:44:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 09:44:40] 
[2025-11-25 09:44:40] 2025-11-25 14:44:10,534 | INFO     | ***************************************
[2025-11-25 09:44:40] 2025-11-25 14:44:11,037 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-25 09:44:40] 2025-11-25 14:44:11,113 | INFO     | sufficient remaining disk space (71588380672 B)
[2025-11-25 09:44:40] 2025-11-25 14:44:11,114 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 09:44:40] 2025-11-25 14:44:11,114 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 09:44:40] 2025-11-25 14:44:11,114 | INFO     | update_server=False
[2025-11-25 09:44:40] 2025-11-25 14:44:11,114 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 09:44:40] 2025-11-25 14:44:11,127 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 09:44:40] 2025-11-25 14:44:11,128 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 09:44:40] 2025-11-25 14:44:11,543 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 09:44:40] 2025-11-25 14:44:11,544 | INFO     | aborting loop
[2025-11-25 09:44:40] 2025-11-25 14:44:11,636 | INFO     | all data control threads have been joined
[2025-11-25 09:44:40] 2025-11-25 14:44:11,878 | INFO     | all job control threads have been joined
[2025-11-25 09:44:40] 2025-11-25 14:44:12,131 | INFO     | [job] retrieve thread has finished
[2025-11-25 09:44:40] 2025-11-25 14:44:12,157 | INFO     | [job] queue monitor thread has finished
[2025-11-25 09:44:40] 2025-11-25 14:44:12,218 | INFO     | all payload control threads have been joined
[2025-11-25 09:44:40] 2025-11-25 14:44:12,469 | INFO     | [payload] validate_post thread has finished
[2025-11-25 09:44:40] 2025-11-25 14:44:12,549 | INFO     | [job] job monitor thread has finished
[2025-11-25 09:44:40] 2025-11-25 14:44:12,605 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 09:44:40] 2025-11-25 14:44:12,657 | INFO     | [data] control thread has finished
[2025-11-25 09:44:40] 2025-11-25 14:44:12,774 | INFO     | [data] copytool_in thread has finished
[2025-11-25 09:44:40] 2025-11-25 14:44:12,777 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 09:44:40] 2025-11-25 14:44:12,884 | INFO     | [job] control thread has finished
[2025-11-25 09:44:40] 2025-11-25 14:44:12,898 | INFO     | [payload] failed_post thread has finished
[2025-11-25 09:44:40] 2025-11-25 14:44:13,137 | INFO     | [data] copytool_out thread has finished
[2025-11-25 09:44:40] 2025-11-25 14:44:13,235 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 09:44:40] 2025-11-25 14:44:13,322 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 09:44:40] 2025-11-25 14:44:13,348 | INFO     | [payload] control thread has finished
[2025-11-25 09:44:40] 2025-11-25 14:44:13,544 | INFO     | [job] validate thread has finished
[2025-11-25 09:44:40] 2025-11-25 14:44:13,608 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 09:44:40] 2025-11-25 14:44:17,384 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 09:44:40] 2025-11-25 14:44:18,822 | INFO     | [monitor] cgroup control has ended
[2025-11-25 09:44:40] 2025-11-25 14:44:20,079 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140377590953792)>', '<ExcThread(monitor, started 140376954357504)>']
[2025-11-25 09:44:40] 2025-11-25 14:44:25,110 | INFO     | all workflow threads have been joined
[2025-11-25 09:44:40] 2025-11-25 14:44:25,110 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 09:44:40] 2025-11-25 14:44:25,110 | INFO     | traces error code: 0
[2025-11-25 09:44:40] 2025-11-25 14:44:25,111 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 09:44:40] 2025-11-25 14:44:39,759 | INFO     | PID=4188318 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-25 09:44:40] 2025-11-25 14:44:39,760 | INFO     | .. there are 51 such processes running
[2025-11-25 09:44:40] 2025-11-25 14:44:39,760 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 09:44:40] 2025-11-25 14:44:39,760 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 09:44:40] 2025-11-25 14:44:39,761 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 09:44:40] 2025-11-25 14:44:39,761 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 09:44:40] 2025-11-25 14:44:39,761 | INFO     | [monitor] control thread has ended
[2025-11-25 09:44:40] 2025-11-25 14:44:39,946 [wrapper] ==== pilot stdout END ====
[2025-11-25 09:44:40] 2025-11-25 14:44:39,948 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 09:44:40] 2025-11-25 14:44:39,951 [wrapper] pilotpid: 4188318
[2025-11-25 09:44:40] 2025-11-25 14:44:39,953 [wrapper] Pilot exit status: 0
[2025-11-25 09:44:40] 2025-11-25 14:44:39,975 [wrapper] pandaids: 6895351142
[2025-11-25 09:44:40] 2025-11-25 14:44:40,143 [wrapper] cleanup supervisor_pilot  939899 4188319
[2025-11-25 09:44:40] 2025-11-25 14:44:40,148 [wrapper] Test setup, not cleaning
[2025-11-25 09:44:40] 2025-11-25 14:44:40,151 [wrapper] apfmon messages muted
[2025-11-25 09:44:40] 2025-11-25 14:44:40,154 [wrapper] ==== wrapper stdout END ====
[2025-11-25 09:44:40] 2025-11-25 14:44:40,156 [wrapper] ==== wrapper stderr END ====
[2025-11-25 09:44:40]  *** Error codes and diagnostics ***
[2025-11-25 09:44:40]     "exeErrorCode": 0,
[2025-11-25 09:44:40]     "exeErrorDiag": "",
[2025-11-25 09:44:40]     "pilotErrorCode": 0,
[2025-11-25 09:44:40]     "pilotErrorDiag": "",
[2025-11-25 09:44:40]  *** Listing of results directory ***
[2025-11-25 09:44:40] total 1324720
[2025-11-25 09:44:40] -rw-r--r--. 1 boincer umatlas    576529 Nov 22 18:08 pilot3.tar.gz
[2025-11-25 09:44:40] -rwx------. 1 boincer umatlas     36292 Nov 22 18:19 runpilot2-wrapper.sh
[2025-11-25 09:44:40] -rw-r--r--. 1 boincer umatlas      5112 Nov 22 18:19 queuedata.json
[2025-11-25 09:44:40] -rw-r--r--. 1 boincer umatlas       100 Nov 24 10:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 09:44:40] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 24 10:20 run_atlas
[2025-11-25 09:44:40] -rw-r--r--. 1 boincer umatlas       105 Nov 24 10:20 job.xml
[2025-11-25 09:44:40] -rw-r--r--. 2 boincer umatlas 410504680 Nov 24 10:20 EVNT.47483658._000540.pool.root.1
[2025-11-25 09:44:40] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 10:20 start_atlas.sh
[2025-11-25 09:44:40] drwxrwx--x. 2 boincer umatlas      4096 Nov 24 10:20 shared
[2025-11-25 09:44:40] -rw-r--r--. 2 boincer umatlas    590103 Nov 24 10:20 input.tar.gz
[2025-11-25 09:44:40] -rw-r--r--. 1 boincer umatlas         0 Nov 24 10:20 boinc_lockfile
[2025-11-25 09:44:40] -rw-r--r--. 1 boincer umatlas      2784 Nov 24 10:20 pandaJob.out
[2025-11-25 09:44:40] -rw-------. 1 boincer umatlas        57 Nov 24 10:20 setup.sh.local
[2025-11-25 09:44:40] -rw-------. 1 boincer umatlas    987541 Nov 24 10:20 agis_schedconf.cvmfs.json
[2025-11-25 09:44:40] drwx------. 5 boincer umatlas      4096 Nov 24 10:20 pilot3
[2025-11-25 09:44:40] -rw-r--r--. 1 boincer umatlas       533 Nov 25 09:25 boinc_task_state.xml
[2025-11-25 09:44:40] -rw-r--r--. 1 boincer umatlas      6614 Nov 25 09:38 init_data.xml
[2025-11-25 09:44:40] -rw-------. 1 boincer umatlas 916050336 Nov 25 09:42 HITS.47556137._005353.pool.root.1
[2025-11-25 09:44:40] -rw-------. 1 boincer umatlas      1059 Nov 25 09:43 memory_monitor_summary.json
[2025-11-25 09:44:40] -rw-------. 1 boincer umatlas   1516240 Nov 25 09:43 agis_ddmendpoints.agis.ALL.json
[2025-11-25 09:44:40] -rw-------. 1 boincer umatlas   2423470 Nov 25 09:43 log.47556137._005353.job.log.tgz.1
[2025-11-25 09:44:40] -rw-------. 1 boincer umatlas        95 Nov 25 09:43 pilot_heartbeat.json
[2025-11-25 09:44:40] -rw-------. 1 boincer umatlas      8629 Nov 25 09:44 heartbeat.json
[2025-11-25 09:44:40] -rw-r--r--. 1 boincer umatlas        29 Nov 25 09:44 wrapper_checkpoint.txt
[2025-11-25 09:44:40] -rw-r--r--. 1 boincer umatlas      8192 Nov 25 09:44 boinc_mmap_file
[2025-11-25 09:44:40] -rw-------. 1 boincer umatlas       823 Nov 25 09:44 pilotlog.txt
[2025-11-25 09:44:40] -rw-------. 1 boincer umatlas  10598531 Nov 25 09:44 log.47556137._005353.job.log.1
[2025-11-25 09:44:40] -rw-------. 1 boincer umatlas       353 Nov 25 09:44 output.list
[2025-11-25 09:44:40] -rw-r--r--. 1 boincer umatlas       620 Nov 25 09:44 runtime_log
[2025-11-25 09:44:40] -rw-------. 1 boincer umatlas  13045760 Nov 25 09:44 result.tar.gz
[2025-11-25 09:44:40] -rw-r--r--. 1 boincer umatlas      9333 Nov 25 09:44 runtime_log.err
[2025-11-25 09:44:40] -rw-------. 1 boincer umatlas       658 Nov 25 09:44 3MFLDmA4Bh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmFMIKDmb1ihPn.diag
[2025-11-25 09:44:40] -rw-r--r--. 1 boincer umatlas     21302 Nov 25 09:44 stderr.txt
[2025-11-25 09:44:40] HITS file was successfully produced:
[2025-11-25 09:44:40] -rw-------. 1 boincer umatlas 916050336 Nov 25 09:42 shared/HITS.pool.root.1
[2025-11-25 09:44:40]  *** Contents of shared directory: ***
[2025-11-25 09:44:40] total 1308808
[2025-11-25 09:44:40] -rw-r--r--. 2 boincer umatlas 410504680 Nov 24 10:20 ATLAS.root_0
[2025-11-25 09:44:40] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 10:20 start_atlas.sh
[2025-11-25 09:44:40] -rw-r--r--. 2 boincer umatlas    590103 Nov 24 10:20 input.tar.gz
[2025-11-25 09:44:40] -rw-------. 1 boincer umatlas 916050336 Nov 25 09:42 HITS.pool.root.1
[2025-11-25 09:44:40] -rw-------. 1 boincer umatlas  13045760 Nov 25 09:44 result.tar.gz
09:44:42 (4184527): run_atlas exited; CPU time 342337.100966
09:44:42 (4184527): called boinc_finish(0)

</stderr_txt>
]]>

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