Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:04:23 (4014833): wrapper (7.7.26015): starting
00:04:23 (4014833): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 00:04:23] Arguments: --nthreads 8
[2025-11-25 00:04:23] Threads: 8
[2025-11-25 00:04:23] Checking for CVMFS
[2025-11-25 00:04:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 00:04:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 00:04:23] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 00:04:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 00:04:23] 2.13.3.0 12275 28164 384616 153270 0 490 39398832 40960001 25871 16776704 25 170719635 99.690 140625641 35917 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 00:04:23] CVMFS is ok
[2025-11-25 00:04:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 00:04:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 00:04:23] Further information can be found at the LHC@home message board.
[2025-11-25 00:04:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 00:04:23] Checking for apptainer binary...
[2025-11-25 00:04:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 00:04:23] Running /usr/bin/apptainer --version
[2025-11-25 00:04:23] apptainer version 1.4.4-1.el9
[2025-11-25 00:04:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 00:04:23] c7-11-11.aglt2.org
[2025-11-25 00:04:23] apptainer works
[2025-11-25 00:04:23] Set ATHENA_PROC_NUMBER=8
[2025-11-25 00:04:23] Set ATHENA_CORE_NUMBER=8
[2025-11-25 00:04:23] Starting ATLAS job with PandaID=6895351130
[2025-11-25 00:04:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 16:43:31]  *** The last 200 lines of the pilot log: ***
[2025-11-25 16:43:31] 2025-11-25 21:42:35,945 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-25 16:43:31] 2025-11-25 21:42:35,950 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 3290.5068593749993
[2025-11-25 16:43:31] 2025-11-25 21:42:35,959 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6895351130/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 16:43:31] 2025-11-25 21:42:35,960 | INFO     | extracted standard info from prmon json
[2025-11-25 16:43:31] 2025-11-25 21:42:35,960 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 16:43:31] 2025-11-25 21:42:35,960 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 16:43:31] 2025-11-25 21:42:35,974 | INFO     | fitting pss+swap vs Time
[2025-11-25 16:43:31] 2025-11-25 21:42:35,975 | INFO     | sum of square deviations: 292722613556.36597
[2025-11-25 16:43:31] 2025-11-25 21:42:35,992 | INFO     | sum of deviations: 2381311014893.5835
[2025-11-25 16:43:31] 2025-11-25 21:42:35,993 | INFO     | mean x: 1764077002.5300713
[2025-11-25 16:43:31] 2025-11-25 21:42:35,993 | INFO     | mean y: 2838688.641182467
[2025-11-25 16:43:31] 2025-11-25 21:42:35,993 | INFO     | intersect: -14348003380.60816
[2025-11-25 16:43:31] 2025-11-25 21:42:35,994 | INFO     | chi2: 5.124624768757488
[2025-11-25 16:43:31] 2025-11-25 21:42:35,995 | INFO     | sum of square deviations: 288269666919.5973
[2025-11-25 16:43:31] 2025-11-25 21:42:36,072 | INFO     | sum of deviations: 2629857904254.3403
[2025-11-25 16:43:31] 2025-11-25 21:42:36,072 | INFO     | mean x: 1764076850.0379097
[2025-11-25 16:43:31] 2025-11-25 21:42:36,072 | INFO     | mean y: 2847194.855532787
[2025-11-25 16:43:31] 2025-11-25 21:42:36,072 | INFO     | intersect: -16090665165.840597
[2025-11-25 16:43:31] 2025-11-25 21:42:36,073 | INFO     | chi2: 3.06324814020352
[2025-11-25 16:43:31] 2025-11-25 21:42:36,073 | INFO     | current chi2=3.06324814020352 (change=40.2249280985653 %)
[2025-11-25 16:43:31] 2025-11-25 21:42:36,074 | INFO     | sum of square deviations: 283861878833.06067
[2025-11-25 16:43:31] 2025-11-25 21:42:36,091 | INFO     | time since job start (59880s) is within the limit (172800.0s)
[2025-11-25 16:43:31] 2025-11-25 21:42:36,103 | INFO     | sum of deviations: 2620793097157.6562
[2025-11-25 16:43:31] 2025-11-25 21:42:36,104 | INFO     | mean x: 1764076697.5417097
[2025-11-25 16:43:31] 2025-11-25 21:42:36,104 | INFO     | mean y: 2846877.2306900104
[2025-11-25 16:43:31] 2025-11-25 21:42:36,104 | INFO     | intersect: -16284229255.640753
[2025-11-25 16:43:31] 2025-11-25 21:42:36,104 | INFO     | chi2: 2.9638364884841315
[2025-11-25 16:43:31] 2025-11-25 21:42:36,104 | INFO     | current chi2=2.9638364884841315 (change=3.245301953004165 %)
[2025-11-25 16:43:31] 2025-11-25 21:42:36,104 | INFO     | right removable region: 970
[2025-11-25 16:43:31] 2025-11-25 21:42:36,105 | INFO     | sum of square deviations: 288268810908.6725
[2025-11-25 16:43:31] 2025-11-25 21:42:36,120 | INFO     | sum of deviations: 2095712857131.8064
[2025-11-25 16:43:31] 2025-11-25 21:42:36,120 | INFO     | mean x: 1764077155.0368853
[2025-11-25 16:43:31] 2025-11-25 21:42:36,120 | INFO     | mean y: 2848456.6997950817
[2025-11-25 16:43:31] 2025-11-25 21:42:36,120 | INFO     | intersect: -12821983904.212671
[2025-11-25 16:43:31] 2025-11-25 21:42:36,121 | INFO     | chi2: 2.602968822595673
[2025-11-25 16:43:31] 2025-11-25 21:42:36,121 | INFO     | current chi2=2.602968822595673 (change=49.20664555842619 %)
[2025-11-25 16:43:31] 2025-11-25 21:42:36,122 | INFO     | sum of square deviations: 283860940653.5945
[2025-11-25 16:43:31] 2025-11-25 21:42:36,136 | INFO     | sum of deviations: 2010735360753.5051
[2025-11-25 16:43:31] 2025-11-25 21:42:36,136 | INFO     | mean x: 1764077307.5345006
[2025-11-25 16:43:31] 2025-11-25 21:42:36,137 | INFO     | mean y: 2851396.6714727087
[2025-11-25 16:43:31] 2025-11-25 21:42:36,137 | INFO     | intersect: -12493029907.727848
[2025-11-25 16:43:31] 2025-11-25 21:42:36,137 | INFO     | chi2: 2.5168194870870155
[2025-11-25 16:43:31] 2025-11-25 21:42:36,137 | INFO     | current chi2=2.5168194870870155 (change=3.3096568334133822 %)
[2025-11-25 16:43:31] 2025-11-25 21:42:36,138 | INFO     | left removable region: 20
[2025-11-25 16:43:31] 2025-11-25 21:42:36,138 | INFO     | sum of square deviations: 265838753656.31555
[2025-11-25 16:43:31] 2025-11-25 21:42:36,154 | INFO     | sum of deviations: 2088924365604.3826
[2025-11-25 16:43:31] 2025-11-25 21:42:36,154 | INFO     | mean x: 1764077277.0421052
[2025-11-25 16:43:31] 2025-11-25 21:42:36,154 | INFO     | mean y: 2865166.090526316
[2025-11-25 16:43:31] 2025-11-25 21:42:36,154 | INFO     | intersect: -13859011464.531952
[2025-11-25 16:43:31] 2025-11-25 21:42:36,155 | INFO     | chi2: 0.21358687145039115
[2025-11-25 16:43:31] 2025-11-25 21:42:36,155 | INFO     | current memory leak: 7.86 B/s (using 950 data points, chi2=0.21)
[2025-11-25 16:43:31] 2025-11-25 21:42:36,156 | INFO     | could have reported an average CPU frequency of 3280 MHz (36 samples)
[2025-11-25 16:43:31] 2025-11-25 21:42:36,156 | INFO     | ..............................
[2025-11-25 16:43:31] 2025-11-25 21:42:36,156 | INFO     | . Timing measurements:
[2025-11-25 16:43:31] 2025-11-25 21:42:36,156 | INFO     | . get job = 0 s
[2025-11-25 16:43:31] 2025-11-25 21:42:36,156 | INFO     | . initial setup = 2 s
[2025-11-25 16:43:31] 2025-11-25 21:42:36,156 | INFO     | . payload setup = 11 s
[2025-11-25 16:43:31] 2025-11-25 21:42:36,156 | INFO     | . stage-in = 0 s
[2025-11-25 16:43:31] 2025-11-25 21:42:36,156 | INFO     | . payload execution = 59830 s
[2025-11-25 16:43:31] 2025-11-25 21:42:36,156 | INFO     | . stage-out = 4 s
[2025-11-25 16:43:31] 2025-11-25 21:42:36,156 | INFO     | . log creation = 0 s
[2025-11-25 16:43:31] 2025-11-25 21:42:36,156 | INFO     | ..............................
[2025-11-25 16:43:31] 2025-11-25 21:42:36,230 | INFO     | 
[2025-11-25 16:43:31] 2025-11-25 21:42:36,231 | INFO     | job summary report
[2025-11-25 16:43:31] 2025-11-25 21:42:36,231 | INFO     | --------------------------------------------------
[2025-11-25 16:43:31] 2025-11-25 21:42:36,231 | INFO     | PanDA job id: 6895351130
[2025-11-25 16:43:31] 2025-11-25 21:42:36,231 | INFO     | task id: 47556137
[2025-11-25 16:43:31] 2025-11-25 21:42:36,231 | INFO     | errors: (none)
[2025-11-25 16:43:31] 2025-11-25 21:42:36,231 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 16:43:31] 2025-11-25 21:42:36,231 | INFO     | pilot state: finished 
[2025-11-25 16:43:31] 2025-11-25 21:42:36,231 | INFO     | transexitcode: 0
[2025-11-25 16:43:31] 2025-11-25 21:42:36,231 | INFO     | exeerrorcode: 0
[2025-11-25 16:43:31] 2025-11-25 21:42:36,231 | INFO     | exeerrordiag: 
[2025-11-25 16:43:31] 2025-11-25 21:42:36,231 | INFO     | exitcode: 0
[2025-11-25 16:43:31] 2025-11-25 21:42:36,231 | INFO     | exitmsg: OK
[2025-11-25 16:43:31] 2025-11-25 21:42:36,231 | INFO     | cpuconsumptiontime: 197621 s
[2025-11-25 16:43:31] 2025-11-25 21:42:36,231 | INFO     | nevents: 1000
[2025-11-25 16:43:31] 2025-11-25 21:42:36,231 | INFO     | neventsw: 0
[2025-11-25 16:43:31] 2025-11-25 21:42:36,231 | INFO     | pid: 4059328
[2025-11-25 16:43:31] 2025-11-25 21:42:36,231 | INFO     | pgrp: 4059328
[2025-11-25 16:43:31] 2025-11-25 21:42:36,231 | INFO     | corecount: 8
[2025-11-25 16:43:31] 2025-11-25 21:42:36,232 | INFO     | event service: False
[2025-11-25 16:43:31] 2025-11-25 21:42:36,232 | INFO     | sizes: {0: 2284202, 4: 2284464, 11: 2284492, 59846: 2337396, 59851: 2346395, 59854: 2346451, 59864: 2346825}
[2025-11-25 16:43:31] 2025-11-25 21:42:36,232 | INFO     | --------------------------------------------------
[2025-11-25 16:43:31] 2025-11-25 21:42:36,232 | INFO     | 
[2025-11-25 16:43:31] 2025-11-25 21:42:36,232 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-11-25 16:43:31] 2025-11-25 21:42:36,256 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 16:43:31] 2025-11-25 21:42:36,256 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 16:43:31] 2025-11-25 21:42:36,256 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 16:43:31] 2025-11-25 21:42:36,256 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 16:43:31] 2025-11-25 21:42:36,256 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 16:43:31] 2025-11-25 21:42:36,256 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 16:43:31] 2025-11-25 21:42:36,256 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 16:43:31] 2025-11-25 21:42:36,256 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 16:43:31] 2025-11-25 21:42:36,256 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 16:43:31] 2025-11-25 21:42:36,257 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 16:43:31] 2025-11-25 21:42:36,257 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 16:43:31] 2025-11-25 21:42:36,257 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 16:43:31] 2025-11-25 21:42:36,257 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 16:43:31] 2025-11-25 21:42:36,257 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 16:43:31] 2025-11-25 21:42:36,257 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 16:43:31] 2025-11-25 21:42:36,257 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 16:43:31] 2025-11-25 21:42:36,257 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 16:43:31] 2025-11-25 21:42:36,257 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 16:43:31] 2025-11-25 21:42:36,257 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 16:43:31] 2025-11-25 21:42:36,257 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 16:43:31] 2025-11-25 21:42:36,257 | INFO     | job 6895351130 has completed (purged errors)
[2025-11-25 16:43:31] 2025-11-25 21:42:36,258 | INFO     | overall cleanup function is called
[2025-11-25 16:43:31] 2025-11-25 21:42:37,288 | INFO     | --- collectZombieJob: --- 10, [4059328]
[2025-11-25 16:43:31] 2025-11-25 21:42:37,288 | INFO     | zombie collector waiting for pid 4059328
[2025-11-25 16:43:31] 2025-11-25 21:42:37,288 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 16:43:31] 2025-11-25 21:42:37,288 | INFO     | collected zombie processes
[2025-11-25 16:43:31] 2025-11-25 21:42:37,288 | INFO     | will attempt to kill all subprocesses of pid=4059328
[2025-11-25 16:43:31] 2025-11-25 21:42:37,749 | INFO     | process IDs to be killed: [4059328] (in reverse order)
[2025-11-25 16:43:31] 2025-11-25 21:42:37,889 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 16:43:31] 2025-11-25 21:42:37,889 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 16:43:31] 2025-11-25 21:42:37,908 | INFO     | did not find any defunct processes belonging to 4059328
[2025-11-25 16:43:31] 2025-11-25 21:42:37,924 | INFO     | did not find any defunct processes belonging to 4059328
[2025-11-25 16:43:31] 2025-11-25 21:42:37,925 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 16:43:31] 2025-11-25 21:42:37,925 | INFO     | ready for new job
[2025-11-25 16:43:31] 2025-11-25 21:42:37,926 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 16:43:31] 2025-11-25 21:42:37,930 | INFO     | ***************************************
[2025-11-25 16:43:31] 2025-11-25 21:42:37,931 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 16:43:31] 2025-11-25 21:42:37,931 | INFO     | ***************************************
[2025-11-25 16:43:31] 2025-11-25 21:42:37,931 | INFO     | 
[2025-11-25 16:43:31] 2025-11-25 21:42:37,934 | INFO     | architecture information:
[2025-11-25 16:43:31] 2025-11-25 21:42:37,935 | INFO     | executing command: cat /etc/os-release
[2025-11-25 16:43:31] 2025-11-25 21:42:37,962 | INFO     | cat /etc/os-release:
[2025-11-25 16:43:31] NAME="CentOS Linux"
[2025-11-25 16:43:31] VERSION="7 (Core)"
[2025-11-25 16:43:31] ID="centos"
[2025-11-25 16:43:31] ID_LIKE="rhel fedora"
[2025-11-25 16:43:31] VERSION_ID="7"
[2025-11-25 16:43:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 16:43:31] ANSI_COLOR="0;31"
[2025-11-25 16:43:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 16:43:31] HOME_URL="https://www.centos.org/"
[2025-11-25 16:43:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 16:43:31] 
[2025-11-25 16:43:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 16:43:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 16:43:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 16:43:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 16:43:31] 
[2025-11-25 16:43:31] 2025-11-25 21:42:37,962 | INFO     | ***************************************
[2025-11-25 16:43:31] 2025-11-25 21:42:38,466 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-11-25 16:43:31] 2025-11-25 21:42:38,496 | INFO     | sufficient remaining disk space (78728134656 B)
[2025-11-25 16:43:31] 2025-11-25 21:42:38,497 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 16:43:31] 2025-11-25 21:42:38,497 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 16:43:31] 2025-11-25 21:42:38,497 | INFO     | update_server=False
[2025-11-25 16:43:31] 2025-11-25 21:42:38,497 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 16:43:31] 2025-11-25 21:42:38,498 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 16:43:31] 2025-11-25 21:42:38,929 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-25 16:43:31] 2025-11-25 21:42:38,929 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-25 16:43:31] 2025-11-25 21:42:38,930 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 16:43:31] 2025-11-25 21:42:38,930 | INFO     | will abort loop
[2025-11-25 16:43:31] 2025-11-25 21:42:39,064 | INFO     | all data control threads have been joined
[2025-11-25 16:43:31] 2025-11-25 21:42:39,503 | INFO     | [job] retrieve thread has finished
[2025-11-25 16:43:31] 2025-11-25 21:42:39,675 | INFO     | all payload control threads have been joined
[2025-11-25 16:43:31] 2025-11-25 21:42:39,935 | INFO     | [job] job monitor thread has finished
[2025-11-25 16:43:31] 2025-11-25 21:42:39,955 | INFO     | all job control threads have been joined
[2025-11-25 16:43:31] 2025-11-25 21:42:39,997 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 16:43:31] 2025-11-25 21:42:39,998 | INFO     | [job] validate thread has finished
[2025-11-25 16:43:31] 2025-11-25 21:42:40,071 | INFO     | [data] control thread has finished
[2025-11-25 16:43:31] 2025-11-25 21:42:40,087 | INFO     | [data] copytool_in thread has finished
[2025-11-25 16:43:31] 2025-11-25 21:42:40,105 | INFO     | [payload] failed_post thread has finished
[2025-11-25 16:43:31] 2025-11-25 21:42:40,228 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 16:43:31] 2025-11-25 21:42:40,299 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 16:43:31] 2025-11-25 21:42:40,320 | INFO     | [payload] validate_post thread has finished
[2025-11-25 16:43:31] 2025-11-25 21:42:40,506 | INFO     | [data] copytool_out thread has finished
[2025-11-25 16:43:31] 2025-11-25 21:42:40,638 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 16:43:31] 2025-11-25 21:42:40,681 | INFO     | [payload] control thread has finished
[2025-11-25 16:43:31] 2025-11-25 21:42:40,759 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 16:43:31] 2025-11-25 21:42:40,968 | INFO     | [job] control thread has finished
[2025-11-25 16:43:31] 2025-11-25 21:42:41,264 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 16:43:31] 2025-11-25 21:42:42,273 | INFO     | [job] queue monitor thread has finished
[2025-11-25 16:43:31] 2025-11-25 21:42:44,762 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 16:43:31] 2025-11-25 21:43:09,749 | INFO     | PID=4023324 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-25 16:43:31] 2025-11-25 21:43:09,749 | INFO     | .. there are 35 such processes running
[2025-11-25 16:43:31] 2025-11-25 21:43:09,750 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 16:43:31] 2025-11-25 21:43:09,750 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 16:43:31] 2025-11-25 21:43:09,750 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 16:43:31] 2025-11-25 21:43:23,480 | INFO     | [monitor] cgroup control has ended
[2025-11-25 16:43:31] 2025-11-25 21:43:24,631 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139772488505152)>', '<ExcThread(monitor, started 139772207007488)>']
[2025-11-25 16:43:31] 2025-11-25 21:43:24,858 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 16:43:31] 2025-11-25 21:43:24,858 | INFO     | [monitor] control thread has ended
[2025-11-25 16:43:31] 2025-11-25 21:43:29,656 | INFO     | all workflow threads have been joined
[2025-11-25 16:43:31] 2025-11-25 21:43:29,656 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 16:43:31] 2025-11-25 21:43:29,657 | INFO     | traces error code: 0
[2025-11-25 16:43:31] 2025-11-25 21:43:29,657 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 16:43:31] 2025-11-25 21:43:29,975 [wrapper] ==== pilot stdout END ====
[2025-11-25 16:43:31] 2025-11-25 21:43:29,980 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 16:43:31] 2025-11-25 21:43:30,007 [wrapper] pilotpid: 4023324
[2025-11-25 16:43:31] 2025-11-25 21:43:30,011 [wrapper] Pilot exit status: 0
[2025-11-25 16:43:31] 2025-11-25 21:43:30,029 [wrapper] pandaids: 6895351130
[2025-11-25 16:43:31] 2025-11-25 21:43:30,149 [wrapper] cleanup supervisor_pilot 3204697 4023325
[2025-11-25 16:43:31] 2025-11-25 21:43:30,183 [wrapper] Test setup, not cleaning
[2025-11-25 16:43:31] 2025-11-25 21:43:30,214 [wrapper] apfmon messages muted
[2025-11-25 16:43:31] 2025-11-25 21:43:30,224 [wrapper] ==== wrapper stdout END ====
[2025-11-25 16:43:31] 2025-11-25 21:43:30,227 [wrapper] ==== wrapper stderr END ====
[2025-11-25 16:43:31]  *** Error codes and diagnostics ***
[2025-11-25 16:43:31]     "exeErrorCode": 0,
[2025-11-25 16:43:31]     "exeErrorDiag": "",
[2025-11-25 16:43:31]     "pilotErrorCode": 0,
[2025-11-25 16:43:31]     "pilotErrorDiag": "",
[2025-11-25 16:43:31]  *** Listing of results directory ***
[2025-11-25 16:43:31] total 1323012
[2025-11-25 16:43:31] -rw-r--r--. 1 boincer umatlas    576529 Nov 22 18:08 pilot3.tar.gz
[2025-11-25 16:43:31] -rw-r--r--. 1 boincer umatlas      5112 Nov 22 18:08 queuedata.json
[2025-11-25 16:43:31] -rwx------. 1 boincer umatlas     36292 Nov 22 18:10 runpilot2-wrapper.sh
[2025-11-25 16:43:31] -rw-r--r--. 1 boincer umatlas       100 Nov 25 00:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 16:43:31] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 00:04 run_atlas
[2025-11-25 16:43:31] -rw-r--r--. 1 boincer umatlas       105 Nov 25 00:04 job.xml
[2025-11-25 16:43:31] -rw-r--r--. 2 boincer umatlas 409897018 Nov 25 00:04 EVNT.47483658._000539.pool.root.1
[2025-11-25 16:43:31] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 00:04 shared
[2025-11-25 16:43:31] -rw-r--r--. 2 boincer umatlas    590101 Nov 25 00:04 input.tar.gz
[2025-11-25 16:43:31] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 00:04 start_atlas.sh
[2025-11-25 16:43:31] -rw-r--r--. 1 boincer umatlas         0 Nov 25 00:04 boinc_lockfile
[2025-11-25 16:43:31] -rw-r--r--. 1 boincer umatlas      2781 Nov 25 00:04 pandaJob.out
[2025-11-25 16:43:31] -rw-------. 1 boincer umatlas        57 Nov 25 00:04 setup.sh.local
[2025-11-25 16:43:31] -rw-------. 1 boincer umatlas    991801 Nov 25 00:04 agis_schedconf.cvmfs.json
[2025-11-25 16:43:31] drwx------. 5 boincer umatlas      4096 Nov 25 00:04 pilot3
[2025-11-25 16:43:31] -rw-r--r--. 1 boincer umatlas       532 Nov 25 16:35 boinc_task_state.xml
[2025-11-25 16:43:31] -rw-r--r--. 1 boincer umatlas      6904 Nov 25 16:39 init_data.xml
[2025-11-25 16:43:31] -rw-------. 1 boincer umatlas 921302190 Nov 25 16:41 HITS.47556137._005341.pool.root.1
[2025-11-25 16:43:31] -rw-------. 1 boincer umatlas        95 Nov 25 16:42 pilot_heartbeat.json
[2025-11-25 16:43:31] -rw-------. 1 boincer umatlas      1065 Nov 25 16:42 memory_monitor_summary.json
[2025-11-25 16:43:31] -rw-------. 1 boincer umatlas   1516240 Nov 25 16:42 agis_ddmendpoints.agis.ALL.json
[2025-11-25 16:43:31] -rw-------. 1 boincer umatlas   2121284 Nov 25 16:42 log.47556137._005341.job.log.tgz.1
[2025-11-25 16:43:31] -rw-------. 1 boincer umatlas      8583 Nov 25 16:42 heartbeat.json
[2025-11-25 16:43:31] -rw-------. 1 boincer umatlas      5010 Nov 25 16:43 pilotlog.txt
[2025-11-25 16:43:31] -rw-------. 1 boincer umatlas   7700393 Nov 25 16:43 log.47556137._005341.job.log.1
[2025-11-25 16:43:31] -rw-r--r--. 1 boincer umatlas        28 Nov 25 16:43 wrapper_checkpoint.txt
[2025-11-25 16:43:31] -rw-r--r--. 1 boincer umatlas      8192 Nov 25 16:43 boinc_mmap_file
[2025-11-25 16:43:31] -rw-------. 1 boincer umatlas       353 Nov 25 16:43 output.list
[2025-11-25 16:43:31] -rw-r--r--. 1 boincer umatlas       620 Nov 25 16:43 runtime_log
[2025-11-25 16:43:31] -rw-------. 1 boincer umatlas   9840640 Nov 25 16:43 result.tar.gz
[2025-11-25 16:43:31] -rw-r--r--. 1 boincer umatlas      9343 Nov 25 16:43 runtime_log.err
[2025-11-25 16:43:31] -rw-------. 1 boincer umatlas       663 Nov 25 16:43 hXjMDmcvBh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm7RKKDmk6be1n.diag
[2025-11-25 16:43:31] -rw-r--r--. 1 boincer umatlas     21310 Nov 25 16:43 stderr.txt
[2025-11-25 16:43:31] HITS file was successfully produced:
[2025-11-25 16:43:31] -rw-------. 1 boincer umatlas 921302190 Nov 25 16:41 shared/HITS.pool.root.1
[2025-11-25 16:43:31]  *** Contents of shared directory: ***
[2025-11-25 16:43:31] total 1310220
[2025-11-25 16:43:31] -rw-r--r--. 2 boincer umatlas 409897018 Nov 25 00:04 ATLAS.root_0
[2025-11-25 16:43:31] -rw-r--r--. 2 boincer umatlas    590101 Nov 25 00:04 input.tar.gz
[2025-11-25 16:43:31] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 00:04 start_atlas.sh
[2025-11-25 16:43:31] -rw-------. 1 boincer umatlas 921302190 Nov 25 16:41 HITS.pool.root.1
[2025-11-25 16:43:31] -rw-------. 1 boincer umatlas   9840640 Nov 25 16:43 result.tar.gz
16:43:32 (4014833): run_atlas exited; CPU time 197944.637434
16:43:32 (4014833): called boinc_finish(0)

</stderr_txt>
]]>

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