Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:57:47 (2916389): wrapper (7.7.26015): starting
22:57:47 (2916389): wrapper: running run_atlas (--nthreads 8)
[2025-11-24 22:57:47] Arguments: --nthreads 8
[2025-11-24 22:57:47] Threads: 8
[2025-11-24 22:57:47] Checking for CVMFS
[2025-11-24 22:57:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 22:57:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 22:57:47] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 22:57:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 22:57:47] 2.13.2.0 6465 31888 402160 153268 0 203 21495748 40960001 16503 16776704 0 97517073 99.580 100295850 38687 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-24 22:57:47] CVMFS is ok
[2025-11-24 22:57:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 22:57:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 22:57:47] Further information can be found at the LHC@home message board.
[2025-11-24 22:57:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 22:57:47] Checking for apptainer binary...
[2025-11-24 22:57:47] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 22:57:47] Running /usr/bin/apptainer --version
[2025-11-24 22:57:47] apptainer version 1.4.4-1.el9
[2025-11-24 22:57:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 22:57:48] c-206-40.aglt2.org
[2025-11-24 22:57:48] apptainer works
[2025-11-24 22:57:48] Set ATHENA_PROC_NUMBER=8
[2025-11-24 22:57:48] Set ATHENA_CORE_NUMBER=8
[2025-11-24 22:57:48] Starting ATLAS job with PandaID=6895368980
[2025-11-24 22:57:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 17:39:20]  *** The last 200 lines of the pilot log: ***
[2025-11-25 17:39:20] 2025-11-25 22:38:42,425 | INFO     | monitor loop #4067: job 0:6895368980 is in state 'finished'
[2025-11-25 17:39:20] 2025-11-25 22:38:42,425 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 17:39:20] 2025-11-25 22:38:44,385 | INFO     | time since job start (67242s) is within the limit (172800.0s)
[2025-11-25 17:39:20] 2025-11-25 22:38:44,473 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-25 17:39:20] 2025-11-25 22:38:44,482 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 3280.3754062500007
[2025-11-25 17:39:20] 2025-11-25 22:38:44,498 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895368980/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 17:39:20] 2025-11-25 22:38:44,499 | INFO     | extracted standard info from prmon json
[2025-11-25 17:39:20] 2025-11-25 22:38:44,499 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 17:39:20] 2025-11-25 22:38:44,499 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 17:39:20] 2025-11-25 22:38:44,525 | INFO     | fitting pss+swap vs Time
[2025-11-25 17:39:20] 2025-11-25 22:38:44,526 | INFO     | sum of square deviations: 414956024246.94806
[2025-11-25 17:39:20] 2025-11-25 22:38:44,548 | INFO     | sum of deviations: 2605691971383.052
[2025-11-25 17:39:20] 2025-11-25 22:38:44,549 | INFO     | mean x: 1764076702.8793104
[2025-11-25 17:39:20] 2025-11-25 22:38:44,549 | INFO     | mean y: 2916827.489110708
[2025-11-25 17:39:20] 2025-11-25 22:38:44,549 | INFO     | intersect: -11074499170.840769
[2025-11-25 17:39:20] 2025-11-25 22:38:44,550 | INFO     | chi2: 6.0753837691467005
[2025-11-25 17:39:20] 2025-11-25 22:38:44,551 | INFO     | sum of square deviations: 409333918501.0138
[2025-11-25 17:39:20] 2025-11-25 22:38:44,572 | INFO     | sum of deviations: 2998017010010.081
[2025-11-25 17:39:20] 2025-11-25 22:38:44,572 | INFO     | mean x: 1764076550.390155
[2025-11-25 17:39:20] 2025-11-25 22:38:44,573 | INFO     | mean y: 2927469.062898815
[2025-11-25 17:39:20] 2025-11-25 22:38:44,573 | INFO     | intersect: -12917407900.155941
[2025-11-25 17:39:20] 2025-11-25 22:38:44,573 | INFO     | chi2: 2.654563101304894
[2025-11-25 17:39:20] 2025-11-25 22:38:44,573 | INFO     | current chi2=2.654563101304894 (change=56.306248260630746 %)
[2025-11-25 17:39:20] 2025-11-25 22:38:44,574 | INFO     | sum of square deviations: 403762836967.31915
[2025-11-25 17:39:20] 2025-11-25 22:38:44,592 | INFO     | sum of deviations: 3121396176030.139
[2025-11-25 17:39:20] 2025-11-25 22:38:44,593 | INFO     | mean x: 1764076397.901099
[2025-11-25 17:39:20] 2025-11-25 22:38:44,593 | INFO     | mean y: 2930840.964285714
[2025-11-25 17:39:20] 2025-11-25 22:38:44,593 | INFO     | intersect: -13634731713.599157
[2025-11-25 17:39:20] 2025-11-25 22:38:44,594 | INFO     | chi2: 2.062865704574972
[2025-11-25 17:39:20] 2025-11-25 22:38:44,594 | INFO     | current chi2=2.062865704574972 (change=22.289822247550386 %)
[2025-11-25 17:39:20] 2025-11-25 22:38:44,594 | INFO     | right removable region: 1091
[2025-11-25 17:39:20] 2025-11-25 22:38:44,595 | INFO     | sum of square deviations: 409332453166.57043
[2025-11-25 17:39:20] 2025-11-25 22:38:44,615 | INFO     | sum of deviations: 2344801209340.2954
[2025-11-25 17:39:20] 2025-11-25 22:38:44,615 | INFO     | mean x: 1764076855.388332
[2025-11-25 17:39:20] 2025-11-25 22:38:44,615 | INFO     | mean y: 2923891.5697356425
[2025-11-25 17:39:20] 2025-11-25 22:38:44,615 | INFO     | intersect: -10102332879.264774
[2025-11-25 17:39:20] 2025-11-25 22:38:44,616 | INFO     | chi2: 4.218099243436891
[2025-11-25 17:39:20] 2025-11-25 22:38:44,616 | INFO     | current chi2=4.218099243436891 (change=30.57065357980948 %)
[2025-11-25 17:39:20] 2025-11-25 22:38:44,617 | INFO     | sum of square deviations: 403760107426.8887
[2025-11-25 17:39:20] 2025-11-25 22:38:44,634 | INFO     | sum of deviations: 2280633534959.381
[2025-11-25 17:39:20] 2025-11-25 22:38:44,634 | INFO     | mean x: 1764077007.8946886
[2025-11-25 17:39:20] 2025-11-25 22:38:44,634 | INFO     | mean y: 2925647.2206959706
[2025-11-25 17:39:20] 2025-11-25 22:38:44,634 | INFO     | intersect: -9961439599.49685
[2025-11-25 17:39:20] 2025-11-25 22:38:44,635 | INFO     | chi2: 4.197289879444478
[2025-11-25 17:39:20] 2025-11-25 22:38:44,635 | INFO     | current chi2=4.197289879444478 (change=0.4933350969584482 %)
[2025-11-25 17:39:20] 2025-11-25 22:38:44,635 | INFO     | left removable region: 20
[2025-11-25 17:39:20] 2025-11-25 22:38:44,636 | INFO     | sum of square deviations: 380910895582.705
[2025-11-25 17:39:20] 2025-11-25 22:38:44,684 | INFO     | sum of deviations: 2693887845586.038
[2025-11-25 17:39:20] 2025-11-25 22:38:44,684 | INFO     | mean x: 1764076977.4313726
[2025-11-25 17:39:20] 2025-11-25 22:38:44,685 | INFO     | mean y: 2942746.415499533
[2025-11-25 17:39:20] 2025-11-25 22:38:44,685 | INFO     | intersect: -12473007884.79638
[2025-11-25 17:39:20] 2025-11-25 22:38:44,686 | INFO     | chi2: 0.1473644725789523
[2025-11-25 17:39:20] 2025-11-25 22:38:44,686 | INFO     | current memory leak: 7.07 B/s (using 1071 data points, chi2=0.15)
[2025-11-25 17:39:20] 2025-11-25 22:38:44,686 | INFO     | could have reported an average CPU frequency of 3266 MHz (40 samples)
[2025-11-25 17:39:20] 2025-11-25 22:38:44,687 | INFO     | ..............................
[2025-11-25 17:39:20] 2025-11-25 22:38:44,687 | INFO     | . Timing measurements:
[2025-11-25 17:39:20] 2025-11-25 22:38:44,687 | INFO     | . get job = 0 s
[2025-11-25 17:39:20] 2025-11-25 22:38:44,687 | INFO     | . initial setup = 2 s
[2025-11-25 17:39:20] 2025-11-25 22:38:44,687 | INFO     | . payload setup = 10 s
[2025-11-25 17:39:20] 2025-11-25 22:38:44,687 | INFO     | . stage-in = 0 s
[2025-11-25 17:39:20] 2025-11-25 22:38:44,687 | INFO     | . payload execution = 67189 s
[2025-11-25 17:39:20] 2025-11-25 22:38:44,687 | INFO     | . stage-out = 3 s
[2025-11-25 17:39:20] 2025-11-25 22:38:44,687 | INFO     | . log creation = 1 s
[2025-11-25 17:39:20] 2025-11-25 22:38:44,687 | INFO     | ..............................
[2025-11-25 17:39:20] 2025-11-25 22:38:45,512 | INFO     | 
[2025-11-25 17:39:20] 2025-11-25 22:38:45,512 | INFO     | job summary report
[2025-11-25 17:39:20] 2025-11-25 22:38:45,512 | INFO     | --------------------------------------------------
[2025-11-25 17:39:20] 2025-11-25 22:38:45,512 | INFO     | PanDA job id: 6895368980
[2025-11-25 17:39:20] 2025-11-25 22:38:45,512 | INFO     | task id: 47556137
[2025-11-25 17:39:20] 2025-11-25 22:38:45,512 | INFO     | errors: (none)
[2025-11-25 17:39:20] 2025-11-25 22:38:45,512 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 17:39:20] 2025-11-25 22:38:45,513 | INFO     | pilot state: finished 
[2025-11-25 17:39:20] 2025-11-25 22:38:45,513 | INFO     | transexitcode: 0
[2025-11-25 17:39:20] 2025-11-25 22:38:45,513 | INFO     | exeerrorcode: 0
[2025-11-25 17:39:20] 2025-11-25 22:38:45,513 | INFO     | exeerrordiag: 
[2025-11-25 17:39:20] 2025-11-25 22:38:45,513 | INFO     | exitcode: 0
[2025-11-25 17:39:20] 2025-11-25 22:38:45,513 | INFO     | exitmsg: OK
[2025-11-25 17:39:20] 2025-11-25 22:38:45,513 | INFO     | cpuconsumptiontime: 196267 s
[2025-11-25 17:39:20] 2025-11-25 22:38:45,513 | INFO     | nevents: 1000
[2025-11-25 17:39:20] 2025-11-25 22:38:45,513 | INFO     | neventsw: 0
[2025-11-25 17:39:20] 2025-11-25 22:38:45,513 | INFO     | pid: 2929240
[2025-11-25 17:39:20] 2025-11-25 22:38:45,513 | INFO     | pgrp: 2929240
[2025-11-25 17:39:20] 2025-11-25 22:38:45,513 | INFO     | corecount: 8
[2025-11-25 17:39:20] 2025-11-25 22:38:45,513 | INFO     | event service: False
[2025-11-25 17:39:20] 2025-11-25 22:38:45,513 | INFO     | sizes: {0: 2283482, 1: 2284338, 8: 2284600, 12: 2284628, 67203: 2340951, 67207: 2349950, 67211: 2350162, 67224: 2350408}
[2025-11-25 17:39:20] 2025-11-25 22:38:45,513 | INFO     | --------------------------------------------------
[2025-11-25 17:39:20] 2025-11-25 22:38:45,513 | INFO     | 
[2025-11-25 17:39:20] 2025-11-25 22:38:45,514 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-25 17:39:20] 2025-11-25 22:38:45,640 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 17:39:20] 2025-11-25 22:38:45,640 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 17:39:20] 2025-11-25 22:38:45,640 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 17:39:20] 2025-11-25 22:38:45,640 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 17:39:20] 2025-11-25 22:38:45,640 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 17:39:20] 2025-11-25 22:38:45,640 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 17:39:20] 2025-11-25 22:38:45,641 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 17:39:20] 2025-11-25 22:38:45,641 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 17:39:20] 2025-11-25 22:38:45,641 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 17:39:20] 2025-11-25 22:38:45,641 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 17:39:20] 2025-11-25 22:38:45,641 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 17:39:20] 2025-11-25 22:38:45,641 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 17:39:20] 2025-11-25 22:38:45,641 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 17:39:20] 2025-11-25 22:38:45,641 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 17:39:20] 2025-11-25 22:38:45,641 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 17:39:20] 2025-11-25 22:38:45,641 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 17:39:20] 2025-11-25 22:38:45,641 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 17:39:20] 2025-11-25 22:38:45,641 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 17:39:20] 2025-11-25 22:38:45,641 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 17:39:20] 2025-11-25 22:38:45,641 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 17:39:20] 2025-11-25 22:38:45,642 | INFO     | job 6895368980 has completed (purged errors)
[2025-11-25 17:39:20] 2025-11-25 22:38:45,642 | INFO     | overall cleanup function is called
[2025-11-25 17:39:20] 2025-11-25 22:38:46,763 | INFO     | --- collectZombieJob: --- 10, [2929240]
[2025-11-25 17:39:20] 2025-11-25 22:38:46,763 | INFO     | zombie collector waiting for pid 2929240
[2025-11-25 17:39:20] 2025-11-25 22:38:46,763 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 17:39:20] 2025-11-25 22:38:46,763 | INFO     | collected zombie processes
[2025-11-25 17:39:20] 2025-11-25 22:38:46,763 | INFO     | will attempt to kill all subprocesses of pid=2929240
[2025-11-25 17:39:20] 2025-11-25 22:38:47,294 | INFO     | process IDs to be killed: [2929240] (in reverse order)
[2025-11-25 17:39:20] 2025-11-25 22:38:47,547 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 17:39:20] 2025-11-25 22:38:47,547 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 17:39:20] 2025-11-25 22:38:47,585 | INFO     | did not find any defunct processes belonging to 2929240
[2025-11-25 17:39:20] 2025-11-25 22:38:47,598 | INFO     | did not find any defunct processes belonging to 2929240
[2025-11-25 17:39:20] 2025-11-25 22:38:47,599 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 17:39:20] 2025-11-25 22:38:47,599 | INFO     | ready for new job
[2025-11-25 17:39:20] 2025-11-25 22:38:47,599 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 17:39:20] 2025-11-25 22:38:47,605 | INFO     | ***************************************
[2025-11-25 17:39:20] 2025-11-25 22:38:47,605 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 17:39:20] 2025-11-25 22:38:47,605 | INFO     | ***************************************
[2025-11-25 17:39:20] 2025-11-25 22:38:47,605 | INFO     | 
[2025-11-25 17:39:20] 2025-11-25 22:38:47,608 | INFO     | architecture information:
[2025-11-25 17:39:20] 2025-11-25 22:38:47,609 | INFO     | executing command: cat /etc/os-release
[2025-11-25 17:39:20] 2025-11-25 22:38:47,625 | INFO     | cat /etc/os-release:
[2025-11-25 17:39:20] NAME="CentOS Linux"
[2025-11-25 17:39:20] VERSION="7 (Core)"
[2025-11-25 17:39:20] ID="centos"
[2025-11-25 17:39:20] ID_LIKE="rhel fedora"
[2025-11-25 17:39:20] VERSION_ID="7"
[2025-11-25 17:39:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 17:39:20] ANSI_COLOR="0;31"
[2025-11-25 17:39:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 17:39:20] HOME_URL="https://www.centos.org/"
[2025-11-25 17:39:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 17:39:20] 
[2025-11-25 17:39:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 17:39:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 17:39:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 17:39:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 17:39:20] 
[2025-11-25 17:39:20] 2025-11-25 22:38:47,626 | INFO     | ***************************************
[2025-11-25 17:39:20] 2025-11-25 22:38:48,129 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-25 17:39:20] 2025-11-25 22:38:48,157 | INFO     | sufficient remaining disk space (77697384448 B)
[2025-11-25 17:39:20] 2025-11-25 22:38:48,157 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 17:39:20] 2025-11-25 22:38:48,157 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 17:39:20] 2025-11-25 22:38:48,157 | INFO     | update_server=False
[2025-11-25 17:39:20] 2025-11-25 22:38:48,157 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 17:39:20] 2025-11-25 22:38:48,484 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 17:39:20] 2025-11-25 22:38:48,484 | INFO     | aborting loop
[2025-11-25 17:39:20] 2025-11-25 22:38:48,596 | INFO     | all data control threads have been joined
[2025-11-25 17:39:20] 2025-11-25 22:38:48,912 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 17:39:20] 2025-11-25 22:38:49,163 | INFO     | [job] retrieve thread has finished
[2025-11-25 17:39:20] 2025-11-25 22:38:49,384 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 17:39:20] 2025-11-25 22:38:49,485 | INFO     | [payload] failed_post thread has finished
[2025-11-25 17:39:20] 2025-11-25 22:38:49,490 | INFO     | [job] job monitor thread has finished
[2025-11-25 17:39:20] 2025-11-25 22:38:49,495 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 17:39:20] 2025-11-25 22:38:49,499 | INFO     | [data] copytool_in thread has finished
[2025-11-25 17:39:20] 2025-11-25 22:38:49,587 | INFO     | all payload control threads have been joined
[2025-11-25 17:39:20] 2025-11-25 22:38:49,605 | INFO     | [data] control thread has finished
[2025-11-25 17:39:20] 2025-11-25 22:38:49,704 | INFO     | [payload] validate_post thread has finished
[2025-11-25 17:39:20] 2025-11-25 22:38:49,821 | INFO     | all job control threads have been joined
[2025-11-25 17:39:20] 2025-11-25 22:38:50,088 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 17:39:20] 2025-11-25 22:38:50,222 | INFO     | [job] validate thread has finished
[2025-11-25 17:39:20] 2025-11-25 22:38:50,308 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 17:39:20] 2025-11-25 22:38:50,541 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 17:39:20] 2025-11-25 22:38:50,593 | INFO     | [payload] control thread has finished
[2025-11-25 17:39:20] 2025-11-25 22:38:50,827 | INFO     | [job] control thread has finished
[2025-11-25 17:39:20] 2025-11-25 22:38:50,918 | INFO     | [data] copytool_out thread has finished
[2025-11-25 17:39:20] 2025-11-25 22:38:51,094 | INFO     | [job] queue monitor thread has finished
[2025-11-25 17:39:20] 2025-11-25 22:38:51,491 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 17:39:20] 2025-11-25 22:38:55,513 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 17:39:20] 2025-11-25 22:39:04,823 | INFO     | [monitor] cgroup control has ended
[2025-11-25 17:39:20] 2025-11-25 22:39:05,512 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139906433517376)>', '<ExcThread(monitor, started 139905799808768)>']
[2025-11-25 17:39:20] 2025-11-25 22:39:10,538 | INFO     | all workflow threads have been joined
[2025-11-25 17:39:20] 2025-11-25 22:39:10,540 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 17:39:20] 2025-11-25 22:39:10,540 | INFO     | traces error code: 0
[2025-11-25 17:39:20] 2025-11-25 22:39:10,540 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 17:39:20] 2025-11-25 22:39:18,262 | INFO     | PID=2920909 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-25 17:39:20] 2025-11-25 22:39:18,282 | INFO     | .. there are 21 such processes running
[2025-11-25 17:39:20] 2025-11-25 22:39:18,282 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 17:39:20] 2025-11-25 22:39:18,283 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 17:39:20] 2025-11-25 22:39:18,283 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 17:39:20] 2025-11-25 22:39:18,283 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 17:39:20] 2025-11-25 22:39:18,283 | INFO     | [monitor] control thread has ended
[2025-11-25 17:39:20] 2025-11-25 22:39:18,914 [wrapper] ==== pilot stdout END ====
[2025-11-25 17:39:20] 2025-11-25 22:39:18,985 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 17:39:20] 2025-11-25 22:39:19,056 [wrapper] pilotpid: 2920909
[2025-11-25 17:39:20] 2025-11-25 22:39:19,091 [wrapper] Pilot exit status: 0
[2025-11-25 17:39:20] 2025-11-25 22:39:19,184 [wrapper] pandaids: 6895368980
[2025-11-25 17:39:20] 2025-11-25 22:39:19,677 [wrapper] cleanup supervisor_pilot 1903540 2920910
[2025-11-25 17:39:20] 2025-11-25 22:39:19,694 [wrapper] Test setup, not cleaning
[2025-11-25 17:39:20] 2025-11-25 22:39:19,717 [wrapper] apfmon messages muted
[2025-11-25 17:39:20] 2025-11-25 22:39:19,785 [wrapper] ==== wrapper stdout END ====
[2025-11-25 17:39:20] 2025-11-25 22:39:19,801 [wrapper] ==== wrapper stderr END ====
[2025-11-25 17:39:20]  *** Error codes and diagnostics ***
[2025-11-25 17:39:20]     "exeErrorCode": 0,
[2025-11-25 17:39:20]     "exeErrorDiag": "",
[2025-11-25 17:39:20]     "pilotErrorCode": 0,
[2025-11-25 17:39:20]     "pilotErrorDiag": "",
[2025-11-25 17:39:20]  *** Listing of results directory ***
[2025-11-25 17:39:20] total 1317432
[2025-11-25 17:39:20] -rw-r--r--. 1 boincer umatlas    576529 Nov 23 14:32 pilot3.tar.gz
[2025-11-25 17:39:20] -rw-r--r--. 1 boincer umatlas      5112 Nov 23 14:46 queuedata.json
[2025-11-25 17:39:20] -rwx------. 1 boincer umatlas     36292 Nov 23 14:47 runpilot2-wrapper.sh
[2025-11-25 17:39:20] -rw-r--r--. 1 boincer umatlas       100 Nov 24 22:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 17:39:20] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 24 22:57 run_atlas
[2025-11-25 17:39:20] -rw-r--r--. 1 boincer umatlas       105 Nov 24 22:57 job.xml
[2025-11-25 17:39:20] -rw-r--r--. 2 boincer umatlas 410259315 Nov 24 22:57 EVNT.47483658._000874.pool.root.1
[2025-11-25 17:39:20] drwxrwx--x. 2 boincer umatlas      4096 Nov 24 22:57 shared
[2025-11-25 17:39:20] -rw-r--r--. 2 boincer umatlas    590105 Nov 24 22:57 input.tar.gz
[2025-11-25 17:39:20] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 22:57 start_atlas.sh
[2025-11-25 17:39:20] -rw-r--r--. 1 boincer umatlas         0 Nov 24 22:57 boinc_lockfile
[2025-11-25 17:39:20] -rw-r--r--. 1 boincer umatlas      2786 Nov 24 22:57 pandaJob.out
[2025-11-25 17:39:20] -rw-------. 1 boincer umatlas        57 Nov 24 22:57 setup.sh.local
[2025-11-25 17:39:20] -rw-------. 1 boincer umatlas    991801 Nov 24 22:58 agis_schedconf.cvmfs.json
[2025-11-25 17:39:20] drwx------. 5 boincer umatlas      4096 Nov 24 22:58 pilot3
[2025-11-25 17:39:20] -rw-r--r--. 1 boincer umatlas       533 Nov 25 17:27 boinc_task_state.xml
[2025-11-25 17:39:20] -rw-r--r--. 1 boincer umatlas      6904 Nov 25 17:27 init_data.xml
[2025-11-25 17:39:20] -rw-------. 1 boincer umatlas 913390173 Nov 25 17:37 HITS.47556137._008607.pool.root.1
[2025-11-25 17:39:20] -rw-------. 1 boincer umatlas      1050 Nov 25 17:38 memory_monitor_summary.json
[2025-11-25 17:39:20] -rw-------. 1 boincer umatlas   1516240 Nov 25 17:38 agis_ddmendpoints.agis.ALL.json
[2025-11-25 17:39:20] -rw-------. 1 boincer umatlas   2205915 Nov 25 17:38 log.47556137._008607.job.log.tgz.1
[2025-11-25 17:39:20] -rw-------. 1 boincer umatlas        95 Nov 25 17:38 pilot_heartbeat.json
[2025-11-25 17:39:20] -rw-------. 1 boincer umatlas      8595 Nov 25 17:38 heartbeat.json
[2025-11-25 17:39:20] -rw-r--r--. 1 boincer umatlas      8192 Nov 25 17:39 boinc_mmap_file
[2025-11-25 17:39:20] -rw-r--r--. 1 boincer umatlas        29 Nov 25 17:39 wrapper_checkpoint.txt
[2025-11-25 17:39:20] -rw-------. 1 boincer umatlas       823 Nov 25 17:39 pilotlog.txt
[2025-11-25 17:39:20] -rw-------. 1 boincer umatlas   8534874 Nov 25 17:39 log.47556137._008607.job.log.1
[2025-11-25 17:39:20] -rw-------. 1 boincer umatlas       353 Nov 25 17:39 output.list
[2025-11-25 17:39:20] -rw-r--r--. 1 boincer umatlas       620 Nov 25 17:39 runtime_log
[2025-11-25 17:39:20] -rw-------. 1 boincer umatlas  10762240 Nov 25 17:39 result.tar.gz
[2025-11-25 17:39:20] -rw-r--r--. 1 boincer umatlas      9343 Nov 25 17:39 runtime_log.err
[2025-11-25 17:39:20] -rw-------. 1 boincer umatlas       660 Nov 25 17:39 NMENDmJEVh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmp9KKDmKEeUHo.diag
[2025-11-25 17:39:20] -rw-r--r--. 1 boincer umatlas     21338 Nov 25 17:39 stderr.txt
[2025-11-25 17:39:20] HITS file was successfully produced:
[2025-11-25 17:39:20] -rw-------. 1 boincer umatlas 913390173 Nov 25 17:37 shared/HITS.pool.root.1
[2025-11-25 17:39:20]  *** Contents of shared directory: ***
[2025-11-25 17:39:20] total 1303744
[2025-11-25 17:39:20] -rw-r--r--. 2 boincer umatlas 410259315 Nov 24 22:57 ATLAS.root_0
[2025-11-25 17:39:20] -rw-r--r--. 2 boincer umatlas    590105 Nov 24 22:57 input.tar.gz
[2025-11-25 17:39:20] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 22:57 start_atlas.sh
[2025-11-25 17:39:20] -rw-------. 1 boincer umatlas 913390173 Nov 25 17:37 HITS.pool.root.1
[2025-11-25 17:39:20] -rw-------. 1 boincer umatlas  10762240 Nov 25 17:39 result.tar.gz
17:39:21 (2916389): run_atlas exited; CPU time 196039.522528
17:39:21 (2916389): called boinc_finish(0)

</stderr_txt>
]]>

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