Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:11:27 (1085100): wrapper (7.7.26015): starting
00:11:27 (1085100): wrapper: running run_atlas (--nthreads 8)
[2025-11-24 00:11:27] Arguments: --nthreads 8
[2025-11-24 00:11:27] Threads: 8
[2025-11-24 00:11:27] Checking for CVMFS
[2025-11-24 00:11:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 00:11:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 00:11:28] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 00:11:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 00:11:29] 2.13.2.0 5664 30457 197608 153234 1 95 38428356 39288833 8684 16776704 0 22322938 99.625 18710596 32236 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-24 00:11:29] CVMFS is ok
[2025-11-24 00:11:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 00:11:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 00:11:29] Further information can be found at the LHC@home message board.
[2025-11-24 00:11:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 00:11:29] Checking for apptainer binary...
[2025-11-24 00:11:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 00:11:29] Running /usr/bin/apptainer --version
[2025-11-24 00:11:29] apptainer version 1.4.4-1.el9
[2025-11-24 00:11:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 00:11:30] c-210-30.aglt2.org
[2025-11-24 00:11:30] apptainer works
[2025-11-24 00:11:30] Set ATHENA_PROC_NUMBER=8
[2025-11-24 00:11:30] Set ATHENA_CORE_NUMBER=8
[2025-11-24 00:11:30] Starting ATLAS job with PandaID=6895356262
[2025-11-24 00:11:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 23:54:34]  *** The last 200 lines of the pilot log: ***
[2025-11-25 23:54:34] 2025-11-26 04:53:28,296 | INFO     | monitor loop #10295: job 0:6895356262 is in state 'finished'
[2025-11-25 23:54:34] 2025-11-26 04:53:28,297 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 23:54:34] 2025-11-26 04:53:29,034 | INFO     | time since job start (171629s) is within the limit (172800.0s)
[2025-11-25 23:54:34] 2025-11-26 04:53:29,035 | INFO     | 171634s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-11-25 23:54:34] 2025-11-26 04:53:30,808 | INFO     | monitor loop #10296: job 0:6895356262 is in state 'finished'
[2025-11-25 23:54:34] 2025-11-26 04:53:30,809 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 23:54:34] 2025-11-26 04:53:31,041 | INFO     | time since job start (171631s) is within the limit (172800.0s)
[2025-11-25 23:54:34] 2025-11-26 04:53:33,050 | INFO     | time since job start (171633s) is within the limit (172800.0s)
[2025-11-25 23:54:34] 2025-11-26 04:53:33,315 | INFO     | monitor loop #10297: job 0:6895356262 is in state 'finished'
[2025-11-25 23:54:34] 2025-11-26 04:53:33,316 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 23:54:34] 2025-11-26 04:53:35,056 | INFO     | time since job start (171635s) is within the limit (172800.0s)
[2025-11-25 23:54:34] 2025-11-26 04:53:35,820 | INFO     | monitor loop #10298: job 0:6895356262 is in state 'finished'
[2025-11-25 23:54:34] 2025-11-26 04:53:35,821 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 23:54:34] 2025-11-26 04:53:37,063 | INFO     | time since job start (171637s) is within the limit (172800.0s)
[2025-11-25 23:54:34] 2025-11-26 04:53:38,328 | INFO     | monitor loop #10299: job 0:6895356262 is in state 'finished'
[2025-11-25 23:54:34] 2025-11-26 04:53:38,329 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 23:54:34] 2025-11-26 04:53:39,061 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-25 23:54:34] 2025-11-26 04:53:39,096 | INFO     | time since job start (171639s) is within the limit (172800.0s)
[2025-11-25 23:54:34] 2025-11-26 04:53:39,101 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2599.8503250000003
[2025-11-25 23:54:34] 2025-11-26 04:53:39,108 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6895356262/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 23:54:34] 2025-11-26 04:53:39,109 | INFO     | extracted standard info from prmon json
[2025-11-25 23:54:34] 2025-11-26 04:53:39,110 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 23:54:34] 2025-11-26 04:53:39,110 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 23:54:34] 2025-11-26 04:53:39,161 | INFO     | fitting pss+swap vs Time
[2025-11-25 23:54:34] 2025-11-26 04:53:39,165 | INFO     | sum of square deviations: 6887302785683.279
[2025-11-25 23:54:34] 2025-11-26 04:53:39,394 | INFO     | sum of deviations: 24260358576918.26
[2025-11-25 23:54:34] 2025-11-26 04:53:39,394 | INFO     | mean x: 1764047076.1597297
[2025-11-25 23:54:34] 2025-11-26 04:53:39,394 | INFO     | mean y: 2887705.7097118464
[2025-11-25 23:54:34] 2025-11-26 04:53:39,394 | INFO     | intersect: -6210925734.169933
[2025-11-25 23:54:34] 2025-11-26 04:53:39,398 | INFO     | chi2: 28.8882666605664
[2025-11-25 23:54:34] 2025-11-26 04:53:39,402 | INFO     | sum of square deviations: 6850620351416.074
[2025-11-25 23:54:34] 2025-11-26 04:53:39,819 | INFO     | sum of deviations: 25245953336752.133
[2025-11-25 23:54:34] 2025-11-26 04:53:39,820 | INFO     | mean x: 1764046923.6703494
[2025-11-25 23:54:34] 2025-11-26 04:53:39,820 | INFO     | mean y: 2891802.2099073413
[2025-11-25 23:54:34] 2025-11-26 04:53:39,820 | INFO     | intersect: -6497986079.545293
[2025-11-25 23:54:34] 2025-11-26 04:53:39,828 | INFO     | chi2: 25.417163382379808
[2025-11-25 23:54:34] 2025-11-26 04:53:39,828 | INFO     | current chi2=25.417163382379808 (change=12.015616301841963 %)
[2025-11-25 23:54:34] 2025-11-26 04:53:39,828 | INFO     | right removable region: 2805
[2025-11-25 23:54:34] 2025-11-26 04:53:39,836 | INFO     | sum of square deviations: 6850609960725.729
[2025-11-25 23:54:34] 2025-11-26 04:53:40,247 | INFO     | sum of deviations: 23071202463972.664
[2025-11-25 23:54:34] 2025-11-26 04:53:40,247 | INFO     | mean x: 1764047228.6707056
[2025-11-25 23:54:34] 2025-11-26 04:53:40,248 | INFO     | mean y: 2892648.262651461
[2025-11-25 23:54:34] 2025-11-26 04:53:40,248 | INFO     | intersect: -5937993054.177815
[2025-11-25 23:54:34] 2025-11-26 04:53:40,255 | INFO     | chi2: 24.248658364795638
[2025-11-25 23:54:34] 2025-11-26 04:53:40,256 | INFO     | current chi2=24.248658364795638 (change=16.06052848474986 %)
[2025-11-25 23:54:34] 2025-11-26 04:53:40,256 | INFO     | left removable region: 10
[2025-11-25 23:54:34] 2025-11-26 04:53:40,264 | INFO     | sum of square deviations: 6770357331582.126
[2025-11-25 23:54:34] 2025-11-26 04:53:40,626 | INFO     | sum of deviations: 23205206745241.613
[2025-11-25 23:54:34] 2025-11-26 04:53:40,627 | INFO     | mean x: 1764047198.1946332
[2025-11-25 23:54:34] 2025-11-26 04:53:40,627 | INFO     | mean y: 2901752.3774597496
[2025-11-25 23:54:34] 2025-11-26 04:53:40,627 | INFO     | intersect: -6043319730.131025
[2025-11-25 23:54:34] 2025-11-26 04:53:40,635 | INFO     | chi2: 16.933457417357303
[2025-11-25 23:54:34] 2025-11-26 04:53:40,635 | INFO     | current memory leak: 3.43 B/s (using 2795 data points, chi2=16.93)
[2025-11-25 23:54:34] 2025-11-26 04:53:40,641 | INFO     | could have reported an average CPU frequency of 2599 MHz (96 samples)
[2025-11-25 23:54:34] 2025-11-26 04:53:40,641 | INFO     | ..............................
[2025-11-25 23:54:34] 2025-11-26 04:53:40,641 | INFO     | . Timing measurements:
[2025-11-25 23:54:34] 2025-11-26 04:53:40,642 | INFO     | . get job = 0 s
[2025-11-25 23:54:34] 2025-11-26 04:53:40,642 | INFO     | . initial setup = 5 s
[2025-11-25 23:54:34] 2025-11-26 04:53:40,642 | INFO     | . payload setup = 55 s
[2025-11-25 23:54:34] 2025-11-26 04:53:40,642 | INFO     | . stage-in = 0 s
[2025-11-25 23:54:34] 2025-11-26 04:53:40,642 | INFO     | . payload execution = 171449 s
[2025-11-25 23:54:34] 2025-11-26 04:53:40,642 | INFO     | . stage-out = 8 s
[2025-11-25 23:54:34] 2025-11-26 04:53:40,642 | INFO     | . log creation = 3 s
[2025-11-25 23:54:34] 2025-11-26 04:53:40,642 | INFO     | ..............................
[2025-11-25 23:54:34] 2025-11-26 04:53:40,886 | INFO     | 
[2025-11-25 23:54:34] 2025-11-26 04:53:40,886 | INFO     | job summary report
[2025-11-25 23:54:34] 2025-11-26 04:53:40,886 | INFO     | --------------------------------------------------
[2025-11-25 23:54:34] 2025-11-26 04:53:40,886 | INFO     | PanDA job id: 6895356262
[2025-11-25 23:54:34] 2025-11-26 04:53:40,886 | INFO     | task id: 47556137
[2025-11-25 23:54:34] 2025-11-26 04:53:40,887 | INFO     | errors: (none)
[2025-11-25 23:54:34] 2025-11-26 04:53:40,887 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 23:54:34] 2025-11-26 04:53:40,887 | INFO     | pilot state: finished 
[2025-11-25 23:54:34] 2025-11-26 04:53:40,887 | INFO     | transexitcode: 0
[2025-11-25 23:54:34] 2025-11-26 04:53:40,887 | INFO     | exeerrorcode: 0
[2025-11-25 23:54:34] 2025-11-26 04:53:40,887 | INFO     | exeerrordiag: 
[2025-11-25 23:54:34] 2025-11-26 04:53:40,887 | INFO     | exitcode: 0
[2025-11-25 23:54:34] 2025-11-26 04:53:40,887 | INFO     | exitmsg: OK
[2025-11-25 23:54:34] 2025-11-26 04:53:40,888 | INFO     | cpuconsumptiontime: 317863 s
[2025-11-25 23:54:34] 2025-11-26 04:53:40,888 | INFO     | nevents: 1000
[2025-11-25 23:54:34] 2025-11-26 04:53:40,888 | INFO     | neventsw: 0
[2025-11-25 23:54:34] 2025-11-26 04:53:40,888 | INFO     | pid: 1100566
[2025-11-25 23:54:34] 2025-11-26 04:53:40,888 | INFO     | pgrp: 1100566
[2025-11-25 23:54:34] 2025-11-26 04:53:40,888 | INFO     | corecount: 8
[2025-11-25 23:54:34] 2025-11-26 04:53:40,888 | INFO     | event service: False
[2025-11-25 23:54:34] 2025-11-26 04:53:40,888 | INFO     | sizes: {0: 2297978, 1: 2298579, 3: 2298663, 5: 2298918, 6: 2298918, 18: 2298946, 29: 2299102, 40: 2299130, 45: 2299420, 51: 2299448, 171508: 2404894, 171516: 24146
[2025-11-25 23:54:34] 2025-11-26 04:53:40,888 | INFO     | --------------------------------------------------
[2025-11-25 23:54:34] 2025-11-26 04:53:40,888 | INFO     | 
[2025-11-25 23:54:34] 2025-11-26 04:53:40,889 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-11-25 23:54:34] 2025-11-26 04:53:40,957 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 23:54:34] 2025-11-26 04:53:40,957 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 23:54:34] 2025-11-26 04:53:40,957 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 23:54:34] 2025-11-26 04:53:40,957 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 23:54:34] 2025-11-26 04:53:40,957 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 23:54:34] 2025-11-26 04:53:40,958 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 23:54:34] 2025-11-26 04:53:40,958 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 23:54:34] 2025-11-26 04:53:40,958 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 23:54:34] 2025-11-26 04:53:40,958 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 23:54:34] 2025-11-26 04:53:40,958 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 23:54:34] 2025-11-26 04:53:40,958 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 23:54:34] 2025-11-26 04:53:40,958 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 23:54:34] 2025-11-26 04:53:40,958 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 23:54:34] 2025-11-26 04:53:40,958 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 23:54:34] 2025-11-26 04:53:40,959 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 23:54:34] 2025-11-26 04:53:40,959 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 23:54:34] 2025-11-26 04:53:40,959 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 23:54:34] 2025-11-26 04:53:40,959 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 23:54:34] 2025-11-26 04:53:40,959 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 23:54:34] 2025-11-26 04:53:40,959 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 23:54:34] 2025-11-26 04:53:40,959 | INFO     | job 6895356262 has completed (purged errors)
[2025-11-25 23:54:34] 2025-11-26 04:53:40,960 | INFO     | overall cleanup function is called
[2025-11-25 23:54:34] 2025-11-26 04:53:41,996 | INFO     | --- collectZombieJob: --- 10, [1100566]
[2025-11-25 23:54:34] 2025-11-26 04:53:41,997 | INFO     | zombie collector waiting for pid 1100566
[2025-11-25 23:54:34] 2025-11-26 04:53:41,997 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 23:54:34] 2025-11-26 04:53:41,997 | INFO     | collected zombie processes
[2025-11-25 23:54:34] 2025-11-26 04:53:41,997 | INFO     | will attempt to kill all subprocesses of pid=1100566
[2025-11-25 23:54:34] 2025-11-26 04:53:42,507 | INFO     | process IDs to be killed: [1100566] (in reverse order)
[2025-11-25 23:54:34] 2025-11-26 04:53:42,655 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 23:54:34] 2025-11-26 04:53:42,656 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 23:54:34] 2025-11-26 04:53:42,672 | INFO     | did not find any defunct processes belonging to 1100566
[2025-11-25 23:54:34] 2025-11-26 04:53:42,689 | INFO     | did not find any defunct processes belonging to 1100566
[2025-11-25 23:54:34] 2025-11-26 04:53:42,694 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 23:54:34] 2025-11-26 04:53:42,695 | INFO     | ready for new job
[2025-11-25 23:54:34] 2025-11-26 04:53:42,695 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 23:54:34] 2025-11-26 04:53:42,713 | INFO     | ***************************************
[2025-11-25 23:54:34] 2025-11-26 04:53:42,713 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 23:54:34] 2025-11-26 04:53:42,713 | INFO     | ***************************************
[2025-11-25 23:54:34] 2025-11-26 04:53:42,714 | INFO     | 
[2025-11-25 23:54:34] 2025-11-26 04:53:42,720 | INFO     | architecture information:
[2025-11-25 23:54:34] 2025-11-26 04:53:42,728 | INFO     | executing command: cat /etc/os-release
[2025-11-25 23:54:34] 2025-11-26 04:53:42,812 | INFO     | cat /etc/os-release:
[2025-11-25 23:54:34] NAME="CentOS Linux"
[2025-11-25 23:54:34] VERSION="7 (Core)"
[2025-11-25 23:54:34] ID="centos"
[2025-11-25 23:54:34] ID_LIKE="rhel fedora"
[2025-11-25 23:54:34] VERSION_ID="7"
[2025-11-25 23:54:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 23:54:34] ANSI_COLOR="0;31"
[2025-11-25 23:54:34] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 23:54:34] HOME_URL="https://www.centos.org/"
[2025-11-25 23:54:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 23:54:34] 
[2025-11-25 23:54:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 23:54:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 23:54:34] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 23:54:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 23:54:34] 
[2025-11-25 23:54:34] 2025-11-26 04:53:42,812 | INFO     | ***************************************
[2025-11-25 23:54:34] 2025-11-26 04:53:43,315 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-11-25 23:54:34] 2025-11-26 04:53:43,486 | INFO     | sufficient remaining disk space (50847547392 B)
[2025-11-25 23:54:34] 2025-11-26 04:53:43,486 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 23:54:34] 2025-11-26 04:53:43,486 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 23:54:34] 2025-11-26 04:53:43,487 | INFO     | update_server=False
[2025-11-25 23:54:34] 2025-11-26 04:53:43,487 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 23:54:34] 2025-11-26 04:53:43,487 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 23:54:34] 2025-11-26 04:53:43,504 | INFO     | all data control threads have been joined
[2025-11-25 23:54:34] 2025-11-26 04:53:43,600 | INFO     | all payload control threads have been joined
[2025-11-25 23:54:34] 2025-11-26 04:53:44,376 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 23:54:34] 2025-11-26 04:53:44,377 | INFO     | aborting loop
[2025-11-25 23:54:34] 2025-11-26 04:53:44,492 | INFO     | [job] retrieve thread has finished
[2025-11-25 23:54:34] 2025-11-26 04:53:44,510 | INFO     | [data] control thread has finished
[2025-11-25 23:54:34] 2025-11-26 04:53:44,534 | INFO     | [job] validate thread has finished
[2025-11-25 23:54:34] 2025-11-26 04:53:44,540 | INFO     | [data] copytool_in thread has finished
[2025-11-25 23:54:34] 2025-11-26 04:53:44,606 | INFO     | [payload] control thread has finished
[2025-11-25 23:54:34] 2025-11-26 04:53:44,870 | INFO     | all job control threads have been joined
[2025-11-25 23:54:34] 2025-11-26 04:53:45,159 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 23:54:34] 2025-11-26 04:53:45,179 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 23:54:34] 2025-11-26 04:53:45,288 | INFO     | [payload] validate_post thread has finished
[2025-11-25 23:54:34] 2025-11-26 04:53:45,382 | INFO     | [job] job monitor thread has finished
[2025-11-25 23:54:34] 2025-11-26 04:53:45,494 | INFO     | [data] copytool_out thread has finished
[2025-11-25 23:54:34] 2025-11-26 04:53:45,876 | INFO     | [job] control thread has finished
[2025-11-25 23:54:34] 2025-11-26 04:53:45,889 | INFO     | [payload] failed_post thread has finished
[2025-11-25 23:54:34] 2025-11-26 04:53:45,900 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 23:54:34] 2025-11-26 04:53:45,925 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 23:54:34] 2025-11-26 04:53:45,931 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 23:54:34] 2025-11-26 04:53:46,611 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 23:54:34] 2025-11-26 04:53:46,906 | INFO     | [job] queue monitor thread has finished
[2025-11-25 23:54:34] 2025-11-26 04:53:50,621 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 23:54:34] 2025-11-26 04:54:12,905 | INFO     | PID=1091044 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-25 23:54:34] 2025-11-26 04:54:12,905 | INFO     | .. there are 7 such processes running
[2025-11-25 23:54:34] 2025-11-26 04:54:12,910 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 23:54:34] 2025-11-26 04:54:12,910 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 23:54:34] 2025-11-26 04:54:12,910 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 23:54:34] 2025-11-26 04:54:26,292 | INFO     | [monitor] cgroup control has ended
[2025-11-25 23:54:34] 2025-11-26 04:54:26,675 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140268619319104)>', '<ExcThread(monitor, started 140267986347776)>']
[2025-11-25 23:54:34] 2025-11-26 04:54:27,032 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 23:54:34] 2025-11-26 04:54:27,033 | INFO     | [monitor] control thread has ended
[2025-11-25 23:54:34] 2025-11-26 04:54:31,701 | INFO     | all workflow threads have been joined
[2025-11-25 23:54:34] 2025-11-26 04:54:31,702 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 23:54:34] 2025-11-26 04:54:31,702 | INFO     | traces error code: 0
[2025-11-25 23:54:34] 2025-11-26 04:54:31,702 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 23:54:34] 2025-11-26 04:54:32,103 [wrapper] ==== pilot stdout END ====
[2025-11-25 23:54:34] 2025-11-26 04:54:32,154 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 23:54:34] 2025-11-26 04:54:32,210 [wrapper] pilotpid: 1091044
[2025-11-25 23:54:34] 2025-11-26 04:54:32,265 [wrapper] Pilot exit status: 0
[2025-11-25 23:54:34] 2025-11-26 04:54:32,721 [wrapper] pandaids: 6895356262
[2025-11-25 23:54:34] 2025-11-26 04:54:33,464 [wrapper] cleanup supervisor_pilot 2138353 1091045
[2025-11-25 23:54:34] 2025-11-26 04:54:33,509 [wrapper] Test setup, not cleaning
[2025-11-25 23:54:34] 2025-11-26 04:54:33,560 [wrapper] apfmon messages muted
[2025-11-25 23:54:34] 2025-11-26 04:54:33,609 [wrapper] ==== wrapper stdout END ====
[2025-11-25 23:54:34] 2025-11-26 04:54:33,666 [wrapper] ==== wrapper stderr END ====
[2025-11-25 23:54:34]  *** Error codes and diagnostics ***
[2025-11-25 23:54:34]     "exeErrorCode": 0,
[2025-11-25 23:54:34]     "exeErrorDiag": "",
[2025-11-25 23:54:34]     "pilotErrorCode": 0,
[2025-11-25 23:54:34]     "pilotErrorDiag": "",
[2025-11-25 23:54:34]  *** Listing of results directory ***
[2025-11-25 23:54:34] total 1350672
[2025-11-25 23:54:34] -rw-r--r--. 1 boincer umatlas    576529 Nov 23 05:16 pilot3.tar.gz
[2025-11-25 23:54:34] -rw-r--r--. 1 boincer umatlas      5112 Nov 23 05:49 queuedata.json
[2025-11-25 23:54:34] -rwx------. 1 boincer umatlas     36292 Nov 23 05:50 runpilot2-wrapper.sh
[2025-11-25 23:54:34] -rw-r--r--. 1 boincer umatlas       100 Nov 24 00:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 23:54:34] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 24 00:11 run_atlas
[2025-11-25 23:54:34] -rw-r--r--. 1 boincer umatlas       105 Nov 24 00:11 job.xml
[2025-11-25 23:54:34] -rw-r--r--. 2 boincer umatlas 406125277 Nov 24 00:11 EVNT.47483658._000693.pool.root.1
[2025-11-25 23:54:34] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 00:11 start_atlas.sh
[2025-11-25 23:54:34] drwxrwx--x. 2 boincer umatlas      4096 Nov 24 00:11 shared
[2025-11-25 23:54:34] -rw-r--r--. 2 boincer umatlas    590098 Nov 24 00:11 input.tar.gz
[2025-11-25 23:54:34] -rw-r--r--. 1 boincer umatlas         0 Nov 24 00:11 boinc_lockfile
[2025-11-25 23:54:34] -rw-r--r--. 1 boincer umatlas      2785 Nov 24 00:11 pandaJob.out
[2025-11-25 23:54:34] -rw-------. 1 boincer umatlas        57 Nov 24 00:11 setup.sh.local
[2025-11-25 23:54:34] -rw-------. 1 boincer umatlas    989786 Nov 24 00:12 agis_schedconf.cvmfs.json
[2025-11-25 23:54:34] drwx------. 5 boincer umatlas      4096 Nov 24 00:13 pilot3
[2025-11-25 23:54:34] -rw-r--r--. 1 boincer umatlas       533 Nov 25 23:25 boinc_task_state.xml
[2025-11-25 23:54:34] -rw-r--r--. 1 boincer umatlas      6662 Nov 25 23:45 init_data.xml
[2025-11-25 23:54:34] -rw-------. 1 boincer umatlas 922513012 Nov 25 23:51 HITS.47556137._006883.pool.root.1
[2025-11-25 23:54:34] -rw-------. 1 boincer umatlas      1070 Nov 25 23:52 memory_monitor_summary.json
[2025-11-25 23:54:34] -rw-------. 1 boincer umatlas   1516240 Nov 25 23:53 agis_ddmendpoints.agis.ALL.json
[2025-11-25 23:54:34] -rw-------. 1 boincer umatlas   3482018 Nov 25 23:53 log.47556137._006883.job.log.tgz.1
[2025-11-25 23:54:34] -rw-------. 1 boincer umatlas      8659 Nov 25 23:53 heartbeat.json
[2025-11-25 23:54:34] -rw-------. 1 boincer umatlas        95 Nov 25 23:54 pilot_heartbeat.json
[2025-11-25 23:54:34] -rw-r--r--. 1 boincer umatlas        29 Nov 25 23:54 wrapper_checkpoint.txt
[2025-11-25 23:54:34] -rw-------. 1 boincer umatlas      4823 Nov 25 23:54 pilotlog.txt
[2025-11-25 23:54:34] -rw-------. 1 boincer umatlas  21783867 Nov 25 23:54 log.47556137._006883.job.log.1
[2025-11-25 23:54:34] -rw-r--r--. 1 boincer umatlas      8192 Nov 25 23:54 boinc_mmap_file
[2025-11-25 23:54:34] -rw-------. 1 boincer umatlas       353 Nov 25 23:54 output.list
[2025-11-25 23:54:34] -rw-r--r--. 1 boincer umatlas       620 Nov 25 23:54 runtime_log
[2025-11-25 23:54:34] -rw-------. 1 boincer umatlas  25282560 Nov 25 23:54 result.tar.gz
[2025-11-25 23:54:34] -rw-r--r--. 1 boincer umatlas      9344 Nov 25 23:54 runtime_log.err
[2025-11-25 23:54:34] -rw-------. 1 boincer umatlas       667 Nov 25 23:54 BQcKDm1qMh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmUVIKDm0ROZJn.diag
[2025-11-25 23:54:34] -rw-r--r--. 1 boincer umatlas     21845 Nov 25 23:54 stderr.txt
[2025-11-25 23:54:34] HITS file was successfully produced:
[2025-11-25 23:54:34] -rw-------. 1 boincer umatlas 922513012 Nov 25 23:51 shared/HITS.pool.root.1
[2025-11-25 23:54:34]  *** Contents of shared directory: ***
[2025-11-25 23:54:34] total 1322796
[2025-11-25 23:54:34] -rw-r--r--. 2 boincer umatlas 406125277 Nov 24 00:11 ATLAS.root_0
[2025-11-25 23:54:34] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 00:11 start_atlas.sh
[2025-11-25 23:54:34] -rw-r--r--. 2 boincer umatlas    590098 Nov 24 00:11 input.tar.gz
[2025-11-25 23:54:34] -rw-------. 1 boincer umatlas 922513012 Nov 25 23:51 HITS.pool.root.1
[2025-11-25 23:54:34] -rw-------. 1 boincer umatlas  25282560 Nov 25 23:54 result.tar.gz
23:54:35 (1085100): run_atlas exited; CPU time 320575.810592
23:54:35 (1085100): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN