Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:03:48 (585736): wrapper (7.7.26015): starting
00:03:48 (585736): wrapper: running run_atlas (--nthreads 9)
[2025-11-24 00:03:48] Arguments: --nthreads 9
[2025-11-24 00:03:48] Threads: 9
[2025-11-24 00:03:48] Checking for CVMFS
[2025-11-24 00:03:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 00:03:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 00:03:48] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 00:03:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 00:03:49] 2.13.2.0 3240580 25549 175972 153233 3 320 25746791 40960001 10434 16776704 0 30484259 99.737 17724329 37853 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-24 00:03:49] CVMFS is ok
[2025-11-24 00:03:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 00:03:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 00:03:49] Further information can be found at the LHC@home message board.
[2025-11-24 00:03:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 00:03:49] Checking for apptainer binary...
[2025-11-24 00:03:49] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 00:03:49] Running /usr/bin/apptainer --version
[2025-11-24 00:03:49] apptainer version 1.4.4-1.el9
[2025-11-24 00:03:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 00:03:49] c-210-37-4.aglt2.org
[2025-11-24 00:03:49] apptainer works
[2025-11-24 00:03:49] Set ATHENA_PROC_NUMBER=9
[2025-11-24 00:03:49] Set ATHENA_CORE_NUMBER=9
[2025-11-24 00:03:49] Starting ATLAS job with PandaID=6894053141
[2025-11-24 00:03:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 22:00:14]  *** The last 200 lines of the pilot log: ***
[2025-11-24 22:00:14] 2025-11-25 01:26:09,662 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6894053141/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 22:00:14] 2025-11-25 01:26:09,675 | INFO     | extracted standard info from prmon json
[2025-11-24 22:00:14] 2025-11-25 01:26:09,675 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 22:00:14] 2025-11-25 01:26:09,675 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 22:00:14] 2025-11-25 01:26:09,675 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-24 22:00:14] 2025-11-25 01:26:09,676 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-24 22:00:14] 2025-11-25 01:26:09,753 | INFO     | fitting pss+swap vs Time
[2025-11-24 22:00:14] 2025-11-25 01:26:09,760 | INFO     | sum of square deviations: 537143734672.8655
[2025-11-24 22:00:14] 2025-11-25 01:26:09,848 | INFO     | sum of deviations: 836140303421.1934
[2025-11-24 22:00:14] 2025-11-25 01:26:09,848 | INFO     | mean x: 1763997324.6203165
[2025-11-24 22:00:14] 2025-11-25 01:26:09,848 | INFO     | mean y: 2638272.967527061
[2025-11-24 22:00:14] 2025-11-25 01:26:09,849 | INFO     | intersect: -2743273413.297393
[2025-11-24 22:00:14] 2025-11-25 01:26:09,850 | INFO     | chi2: 3.363589153281734
[2025-11-24 22:00:14] 2025-11-25 01:26:09,852 | INFO     | sum of square deviations: 530462887790.93225
[2025-11-24 22:00:14] 2025-11-25 01:26:09,878 | INFO     | sum of deviations: 995774461260.4003
[2025-11-24 22:00:14] 2025-11-25 01:26:09,878 | INFO     | mean x: 1763997172.1229098
[2025-11-24 22:00:14] 2025-11-25 01:26:09,878 | INFO     | mean y: 2641907.609531773
[2025-11-24 22:00:14] 2025-11-25 01:26:09,878 | INFO     | intersect: -3308698761.3871927
[2025-11-24 22:00:14] 2025-11-25 01:26:09,880 | INFO     | chi2: 1.9709436389219324
[2025-11-24 22:00:14] 2025-11-25 01:26:09,880 | INFO     | current chi2=1.9709436389219324 (change=41.40355587129442 %)
[2025-11-24 22:00:14] 2025-11-25 01:26:09,881 | INFO     | sum of square deviations: 523837669858.984
[2025-11-24 22:00:14] 2025-11-25 01:26:09,920 | INFO     | sum of deviations: 992787097368.9032
[2025-11-24 22:00:14] 2025-11-25 01:26:09,920 | INFO     | mean x: 1763997019.6255248
[2025-11-24 22:00:14] 2025-11-25 01:26:09,920 | INFO     | mean y: 2641838.7531486144
[2025-11-24 22:00:14] 2025-11-25 01:26:09,925 | INFO     | intersect: -3340518803.65132
[2025-11-24 22:00:14] 2025-11-25 01:26:09,926 | INFO     | chi2: 1.9695233119127689
[2025-11-24 22:00:14] 2025-11-25 01:26:09,927 | INFO     | current chi2=1.9695233119127689 (change=0.07206329907741012 %)
[2025-11-24 22:00:14] 2025-11-25 01:26:09,927 | INFO     | right removable region: 1190
[2025-11-24 22:00:14] 2025-11-25 01:26:09,928 | INFO     | sum of square deviations: 530462433340.9324
[2025-11-24 22:00:14] 2025-11-25 01:26:09,941 | INFO     | time since job start (73314s) is within the limit (172800.0s)
[2025-11-24 22:00:14] 2025-11-25 01:26:09,984 | INFO     | sum of deviations: 586669041906.841
[2025-11-24 22:00:14] 2025-11-25 01:26:09,984 | INFO     | mean x: 1763997477.1229098
[2025-11-24 22:00:14] 2025-11-25 01:26:09,984 | INFO     | mean y: 2643960.4364548493
[2025-11-24 22:00:14] 2025-11-25 01:26:09,984 | INFO     | intersect: -1948262729.2454796
[2025-11-24 22:00:14] 2025-11-25 01:26:09,986 | INFO     | chi2: 1.653757460391049
[2025-11-24 22:00:14] 2025-11-25 01:26:09,986 | INFO     | current chi2=1.653757460391049 (change=50.833547587774305 %)
[2025-11-24 22:00:14] 2025-11-25 01:26:09,987 | INFO     | sum of square deviations: 523837052783.9752
[2025-11-24 22:00:14] 2025-11-25 01:26:10,047 | INFO     | sum of deviations: 506342621051.5986
[2025-11-24 22:00:14] 2025-11-25 01:26:10,047 | INFO     | mean x: 1763997629.6221662
[2025-11-24 22:00:14] 2025-11-25 01:26:10,047 | INFO     | mean y: 2645809.3257766585
[2025-11-24 22:00:14] 2025-11-25 01:26:10,047 | INFO     | intersect: -1702440111.1236792
[2025-11-24 22:00:14] 2025-11-25 01:26:10,049 | INFO     | chi2: 1.536862998036625
[2025-11-24 22:00:14] 2025-11-25 01:26:10,049 | INFO     | current chi2=1.536862998036625 (change=7.068416327916848 %)
[2025-11-24 22:00:14] 2025-11-25 01:26:10,049 | INFO     | left removable region: 20
[2025-11-24 22:00:14] 2025-11-25 01:26:10,054 | INFO     | sum of square deviations: 496612592315.72974
[2025-11-24 22:00:14] 2025-11-25 01:26:10,070 | INFO     | monitor loop #4277: job 0:6894053141 is in state 'finished'
[2025-11-24 22:00:14] 2025-11-25 01:26:10,070 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 22:00:14] 2025-11-25 01:26:10,100 | INFO     | sum of deviations: 575857705423.8286
[2025-11-24 22:00:14] 2025-11-25 01:26:10,100 | INFO     | mean x: 1763997599.131624
[2025-11-24 22:00:14] 2025-11-25 01:26:10,105 | INFO     | mean y: 2651529.247863248
[2025-11-24 22:00:14] 2025-11-25 01:26:10,105 | INFO     | intersect: -2042829446.3196278
[2025-11-24 22:00:14] 2025-11-25 01:26:10,106 | INFO     | chi2: 0.042381504399654914
[2025-11-24 22:00:14] 2025-11-25 01:26:10,106 | INFO     | current memory leak: 1.16 B/s (using 1170 data points, chi2=0.04)
[2025-11-24 22:00:14] 2025-11-25 01:26:10,108 | INFO     | could have reported an average CPU frequency of 2836 MHz (43 samples)
[2025-11-24 22:00:14] 2025-11-25 01:26:10,108 | INFO     | ..............................
[2025-11-24 22:00:14] 2025-11-25 01:26:10,108 | INFO     | . Timing measurements:
[2025-11-24 22:00:14] 2025-11-25 01:26:10,108 | INFO     | . get job = 0 s
[2025-11-24 22:00:14] 2025-11-25 01:26:10,108 | INFO     | . initial setup = 4 s
[2025-11-24 22:00:14] 2025-11-25 01:26:10,108 | INFO     | . payload setup = 17 s
[2025-11-24 22:00:14] 2025-11-25 01:26:10,108 | INFO     | . stage-in = 0 s
[2025-11-24 22:00:14] 2025-11-25 01:26:10,108 | INFO     | . payload execution = 73220 s
[2025-11-24 22:00:14] 2025-11-25 01:26:10,108 | INFO     | . stage-out = 5 s
[2025-11-24 22:00:14] 2025-11-25 01:26:10,108 | INFO     | . log creation = 0 s
[2025-11-24 22:00:14] 2025-11-25 01:26:10,108 | INFO     | ..............................
[2025-11-24 22:00:14] 2025-11-25 01:26:10,317 | INFO     | 
[2025-11-24 22:00:14] 2025-11-25 01:26:10,318 | INFO     | job summary report
[2025-11-24 22:00:14] 2025-11-25 01:26:10,318 | INFO     | --------------------------------------------------
[2025-11-24 22:00:14] 2025-11-25 01:26:10,318 | INFO     | PanDA job id: 6894053141
[2025-11-24 22:00:14] 2025-11-25 01:26:10,318 | INFO     | task id: 47523618
[2025-11-24 22:00:14] 2025-11-25 01:26:10,318 | INFO     | errors: (none)
[2025-11-24 22:00:14] 2025-11-25 01:26:10,318 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 22:00:14] 2025-11-25 01:26:10,318 | INFO     | pilot state: finished 
[2025-11-24 22:00:14] 2025-11-25 01:26:10,318 | INFO     | transexitcode: 0
[2025-11-24 22:00:14] 2025-11-25 01:26:10,318 | INFO     | exeerrorcode: 0
[2025-11-24 22:00:14] 2025-11-25 01:26:10,318 | INFO     | exeerrordiag: 
[2025-11-24 22:00:14] 2025-11-25 01:26:10,318 | INFO     | exitcode: 0
[2025-11-24 22:00:14] 2025-11-25 01:26:10,318 | INFO     | exitmsg: OK
[2025-11-24 22:00:14] 2025-11-25 01:26:10,318 | INFO     | cpuconsumptiontime: 77474 s
[2025-11-24 22:00:14] 2025-11-25 01:26:10,318 | INFO     | nevents: 400
[2025-11-24 22:00:14] 2025-11-25 01:26:10,318 | INFO     | neventsw: 0
[2025-11-24 22:00:14] 2025-11-25 01:26:10,318 | INFO     | pid: 629138
[2025-11-24 22:00:14] 2025-11-25 01:26:10,318 | INFO     | pgrp: 629138
[2025-11-24 22:00:14] 2025-11-25 01:26:10,319 | INFO     | corecount: 9
[2025-11-24 22:00:14] 2025-11-25 01:26:10,319 | INFO     | event service: False
[2025-11-24 22:00:14] 2025-11-25 01:26:10,319 | INFO     | sizes: {0: 2298216, 1: 2298415, 12: 2298415, 13: 2298705, 23: 2298761, 73242: 2357034, 73243: 2357161, 73250: 2367006, 73252: 2367062, 73280: 2367256}
[2025-11-24 22:00:14] 2025-11-25 01:26:10,319 | INFO     | --------------------------------------------------
[2025-11-24 22:00:14] 2025-11-25 01:26:10,319 | INFO     | 
[2025-11-24 22:00:14] 2025-11-25 01:26:10,319 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-11-24 22:00:14] 2025-11-25 01:26:10,423 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 22:00:14] 2025-11-25 01:26:10,424 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 22:00:14] 2025-11-25 01:26:10,424 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 22:00:14] 2025-11-25 01:26:10,424 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 22:00:14] 2025-11-25 01:26:10,424 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 22:00:14] 2025-11-25 01:26:10,424 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 22:00:14] 2025-11-25 01:26:10,424 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 22:00:14] 2025-11-25 01:26:10,424 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 22:00:14] 2025-11-25 01:26:10,425 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 22:00:14] 2025-11-25 01:26:10,425 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 22:00:14] 2025-11-25 01:26:10,425 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 22:00:14] 2025-11-25 01:26:10,425 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 22:00:14] 2025-11-25 01:26:10,425 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 22:00:14] 2025-11-25 01:26:10,425 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 22:00:14] 2025-11-25 01:26:10,425 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 22:00:14] 2025-11-25 01:26:10,425 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 22:00:14] 2025-11-25 01:26:10,425 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 22:00:14] 2025-11-25 01:26:10,425 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 22:00:14] 2025-11-25 01:26:10,426 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 22:00:14] 2025-11-25 01:26:10,426 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 22:00:14] 2025-11-25 01:26:10,426 | INFO     | job 6894053141 has completed (purged errors)
[2025-11-24 22:00:14] 2025-11-25 01:26:10,426 | INFO     | overall cleanup function is called
[2025-11-24 22:00:14] 2025-11-25 01:26:11,441 | INFO     | --- collectZombieJob: --- 10, [629138]
[2025-11-24 22:00:14] 2025-11-25 01:26:11,441 | INFO     | zombie collector waiting for pid 629138
[2025-11-24 22:00:14] 2025-11-25 01:26:11,441 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 22:00:14] 2025-11-25 01:26:11,441 | INFO     | collected zombie processes
[2025-11-24 22:00:14] 2025-11-25 01:26:11,441 | INFO     | will attempt to kill all subprocesses of pid=629138
[2025-11-24 22:00:14] 2025-11-25 01:26:11,919 | INFO     | process IDs to be killed: [629138] (in reverse order)
[2025-11-24 22:00:14] 2025-11-25 01:26:12,040 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 22:00:14] 2025-11-25 01:26:12,040 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 22:00:14] 2025-11-25 01:26:12,056 | INFO     | did not find any defunct processes belonging to 629138
[2025-11-24 22:00:14] 2025-11-25 01:26:12,073 | INFO     | did not find any defunct processes belonging to 629138
[2025-11-24 22:00:14] 2025-11-25 01:26:12,085 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 22:00:14] 2025-11-25 01:26:12,085 | INFO     | ready for new job
[2025-11-24 22:00:14] 2025-11-25 01:26:12,085 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 22:00:14] 2025-11-25 01:26:12,121 | INFO     | ***************************************
[2025-11-24 22:00:14] 2025-11-25 01:26:12,121 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 22:00:14] 2025-11-25 01:26:12,122 | INFO     | ***************************************
[2025-11-24 22:00:14] 2025-11-25 01:26:12,122 | INFO     | 
[2025-11-24 22:00:14] 2025-11-25 01:26:12,161 | INFO     | architecture information:
[2025-11-24 22:00:14] 2025-11-25 01:26:12,179 | INFO     | executing command: cat /etc/os-release
[2025-11-24 22:00:14] 2025-11-25 01:26:12,258 | INFO     | cat /etc/os-release:
[2025-11-24 22:00:14] NAME="CentOS Linux"
[2025-11-24 22:00:14] VERSION="7 (Core)"
[2025-11-24 22:00:14] ID="centos"
[2025-11-24 22:00:14] ID_LIKE="rhel fedora"
[2025-11-24 22:00:14] VERSION_ID="7"
[2025-11-24 22:00:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 22:00:14] ANSI_COLOR="0;31"
[2025-11-24 22:00:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 22:00:14] HOME_URL="https://www.centos.org/"
[2025-11-24 22:00:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 22:00:14] 
[2025-11-24 22:00:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 22:00:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 22:00:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 22:00:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 22:00:14] 
[2025-11-24 22:00:14] 2025-11-25 01:26:12,258 | INFO     | ***************************************
[2025-11-24 22:00:14] 2025-11-25 01:26:12,762 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-11-24 22:00:14] 2025-11-25 01:26:12,806 | INFO     | sufficient remaining disk space (68977426432 B)
[2025-11-24 22:00:14] 2025-11-25 01:26:12,807 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 22:00:14] 2025-11-25 01:26:12,807 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 22:00:14] 2025-11-25 01:26:12,807 | INFO     | update_server=False
[2025-11-24 22:00:14] 2025-11-25 01:26:12,807 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 22:00:14] 2025-11-25 01:26:12,904 | INFO     | all payload control threads have been joined
[2025-11-24 22:00:14] 2025-11-25 01:26:12,904 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 22:00:14] 2025-11-25 01:26:13,290 | INFO     | all data control threads have been joined
[2025-11-24 22:00:14] 2025-11-25 01:26:13,585 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 22:00:14] 2025-11-25 01:26:13,585 | INFO     | aborting loop
[2025-11-24 22:00:14] 2025-11-25 01:26:13,813 | INFO     | [job] retrieve thread has finished
[2025-11-24 22:00:14] 2025-11-25 01:26:13,910 | INFO     | [payload] control thread has finished
[2025-11-24 22:00:14] 2025-11-25 01:26:14,019 | INFO     | [job] validate thread has finished
[2025-11-24 22:00:14] 2025-11-25 01:26:14,040 | INFO     | [payload] failed_post thread has finished
[2025-11-24 22:00:14] 2025-11-25 01:26:14,237 | INFO     | all job control threads have been joined
[2025-11-24 22:00:14] 2025-11-25 01:26:14,296 | INFO     | [data] control thread has finished
[2025-11-24 22:00:14] 2025-11-25 01:26:14,517 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 22:00:14] 2025-11-25 01:26:14,523 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 22:00:14] 2025-11-25 01:26:14,529 | INFO     | [data] copytool_in thread has finished
[2025-11-24 22:00:14] 2025-11-25 01:26:14,591 | INFO     | [job] job monitor thread has finished
[2025-11-24 22:00:14] 2025-11-25 01:26:14,851 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 22:00:14] 2025-11-25 01:26:14,861 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 22:00:14] 2025-11-25 01:26:14,912 | INFO     | [data] copytool_out thread has finished
[2025-11-24 22:00:14] 2025-11-25 01:26:15,065 | INFO     | [payload] validate_post thread has finished
[2025-11-24 22:00:14] 2025-11-25 01:26:15,243 | INFO     | [job] control thread has finished
[2025-11-24 22:00:14] 2025-11-25 01:26:15,329 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 22:00:14] 2025-11-25 01:26:15,337 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 22:00:14] 2025-11-25 01:26:16,343 | INFO     | [job] queue monitor thread has finished
[2025-11-24 22:00:14] 2025-11-25 01:26:19,338 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 22:00:14] 2025-11-25 01:26:32,950 | INFO     | [monitor] cgroup control has ended
[2025-11-24 22:00:14] 2025-11-25 01:26:34,320 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140621735790400)>', '<ExcThread(monitor, started 140621071226624)>']
[2025-11-24 22:00:14] 2025-11-25 01:26:39,347 | INFO     | all workflow threads have been joined
[2025-11-24 22:00:14] 2025-11-25 01:26:39,347 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 22:00:14] 2025-11-25 01:26:39,347 | INFO     | traces error code: 0
[2025-11-24 22:00:14] 2025-11-25 01:26:39,348 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 22:00:14] 2025-11-25 01:26:43,793 | INFO     | PID=596222 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-24 22:00:14] 2025-11-25 01:26:43,794 | INFO     | .. there are 11 such processes running
[2025-11-24 22:00:14] 2025-11-25 01:26:43,794 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 22:00:14] 2025-11-25 01:26:43,794 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 22:00:14] 2025-11-25 01:26:43,794 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 22:00:14] 2025-11-25 01:26:43,794 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 22:00:14] 2025-11-25 01:26:43,794 | INFO     | [monitor] control thread has ended
[2025-11-24 22:00:14] 2025-11-25 01:26:44,149 [wrapper] ==== pilot stdout END ====
[2025-11-24 22:00:14] 2025-11-25 01:26:44,165 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 22:00:14] 2025-11-25 01:26:44,181 [wrapper] pilotpid: 596222
[2025-11-24 22:00:14] 2025-11-25 01:26:44,236 [wrapper] Pilot exit status: 0
[2025-11-24 22:00:14] 2025-11-25 01:26:44,359 [wrapper] pandaids: 6894053141
[2025-11-24 22:00:14] 2025-11-25 01:26:44,650 [wrapper] cleanup supervisor_pilot 2450562 596223
[2025-11-24 22:00:14] 2025-11-25 01:26:44,697 [wrapper] Test setup, not cleaning
[2025-11-24 22:00:14] 2025-11-25 01:26:44,742 [wrapper] apfmon messages muted
[2025-11-24 22:00:14] 2025-11-25 01:26:44,781 [wrapper] ==== wrapper stdout END ====
[2025-11-24 22:00:14] 2025-11-25 01:26:44,797 [wrapper] ==== wrapper stderr END ====
[2025-11-24 22:00:14]  *** Error codes and diagnostics ***
[2025-11-24 22:00:14]     "exeErrorCode": 0,
[2025-11-24 22:00:14]     "exeErrorDiag": "",
[2025-11-24 22:00:14]     "pilotErrorCode": 0,
[2025-11-24 22:00:14]     "pilotErrorDiag": "",
[2025-11-24 22:00:14]  *** Listing of results directory ***
[2025-11-24 22:00:14] total 610116
[2025-11-24 22:00:14] -rw-r--r--. 1 boincer umatlas    576529 Nov 23 14:32 pilot3.tar.gz
[2025-11-24 22:00:14] -rw-r--r--. 1 boincer umatlas      5112 Nov 23 14:40 queuedata.json
[2025-11-24 22:00:14] -rwx------. 1 boincer umatlas     36292 Nov 23 14:40 runpilot2-wrapper.sh
[2025-11-24 22:00:14] -rw-r--r--. 1 boincer umatlas       100 Nov 24 00:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 22:00:14] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 24 00:03 run_atlas
[2025-11-24 22:00:14] -rw-r--r--. 1 boincer umatlas       105 Nov 24 00:03 job.xml
[2025-11-24 22:00:14] -rw-r--r--. 2 boincer umatlas 306029121 Nov 24 00:03 EVNT.47523616._000004.pool.root.1
[2025-11-24 22:00:14] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 00:03 start_atlas.sh
[2025-11-24 22:00:14] drwxrwx--x. 2 boincer umatlas      4096 Nov 24 00:03 shared
[2025-11-24 22:00:14] -rw-r--r--. 2 boincer umatlas    589955 Nov 24 00:03 input.tar.gz
[2025-11-24 22:00:14] -rw-r--r--. 1 boincer umatlas         0 Nov 24 00:03 boinc_lockfile
[2025-11-24 22:00:14] -rw-r--r--. 1 boincer umatlas      2610 Nov 24 00:03 pandaJob.out
[2025-11-24 22:00:14] -rw-------. 1 boincer umatlas        57 Nov 24 00:03 setup.sh.local
[2025-11-24 22:00:14] -rw-------. 1 boincer umatlas    989786 Nov 24 00:04 agis_schedconf.cvmfs.json
[2025-11-24 22:00:14] drwx------. 5 boincer umatlas      4096 Nov 24 00:04 pilot3
[2025-11-24 22:00:14] -rw-------. 1 boincer umatlas 294496928 Nov 24 20:23 HITS.47523618._000087.pool.root.1
[2025-11-24 22:00:14] -rw-r--r--. 1 boincer umatlas       530 Nov 24 20:23 boinc_task_state.xml
[2025-11-24 22:00:14] -rw-------. 1 boincer umatlas      1045 Nov 24 20:25 memory_monitor_summary.json
[2025-11-24 22:00:14] -rw-------. 1 boincer umatlas   1516227 Nov 24 20:25 agis_ddmendpoints.agis.ALL.json
[2025-11-24 22:00:14] -rw-------. 1 boincer umatlas   1207807 Nov 24 20:25 log.47523618._000087.job.log.tgz.1
[2025-11-24 22:00:14] -rw-------. 1 boincer umatlas        95 Nov 24 20:26 pilot_heartbeat.json
[2025-11-24 22:00:14] -rw-------. 1 boincer umatlas      7817 Nov 24 20:26 heartbeat.json
[2025-11-24 22:00:14] -rw-------. 1 boincer umatlas       822 Nov 24 20:26 pilotlog.txt
[2025-11-24 22:00:14] -rw-------. 1 boincer umatlas   8955481 Nov 24 20:26 log.47523618._000087.job.log.1
[2025-11-24 22:00:14] -rw-------. 1 boincer umatlas       357 Nov 24 20:26 output.list
[2025-11-24 22:00:14] -rw-r--r--. 1 boincer umatlas       620 Nov 24 20:26 runtime_log
[2025-11-24 22:00:14] -rw-------. 1 boincer umatlas  10178560 Nov 24 20:26 result.tar.gz
[2025-11-24 22:00:14] -rw-r--r--. 1 boincer umatlas      9353 Nov 24 20:26 runtime_log.err
[2025-11-24 22:00:14] -rw-------. 1 boincer umatlas       661 Nov 24 20:26 nNdMDmj7Uh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmXiIKDmWdp0Do.diag
[2025-11-24 22:00:14] -rw-r--r--. 1 boincer umatlas      6841 Nov 24 21:56 init_data.xml
[2025-11-24 22:00:14] -rw-r--r--. 1 boincer umatlas      8192 Nov 24 22:00 boinc_mmap_file
[2025-11-24 22:00:14] -rw-r--r--. 1 boincer umatlas     21331 Nov 24 22:00 stderr.txt
[2025-11-24 22:00:14] -rw-r--r--. 1 boincer umatlas        27 Nov 24 22:00 wrapper_checkpoint.txt
[2025-11-24 22:00:14] HITS file was successfully produced:
[2025-11-24 22:00:14] -rw-------. 1 boincer umatlas 294496928 Nov 24 20:23 shared/HITS.pool.root.1
[2025-11-24 22:00:14]  *** Contents of shared directory: ***
[2025-11-24 22:00:14] total 597000
[2025-11-24 22:00:14] -rw-r--r--. 2 boincer umatlas 306029121 Nov 24 00:03 ATLAS.root_0
[2025-11-24 22:00:14] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 00:03 start_atlas.sh
[2025-11-24 22:00:14] -rw-r--r--. 2 boincer umatlas    589955 Nov 24 00:03 input.tar.gz
[2025-11-24 22:00:14] -rw-------. 1 boincer umatlas 294496928 Nov 24 20:23 HITS.pool.root.1
[2025-11-24 22:00:14] -rw-------. 1 boincer umatlas  10178560 Nov 24 20:26 result.tar.gz
22:00:16 (585736): run_atlas exited; CPU time 79555.858836
22:00:16 (585736): called boinc_finish(0)

</stderr_txt>
]]>

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