Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
15:34:05 (1354865): wrapper (7.7.26015): starting
15:34:05 (1354865): wrapper: running run_atlas (--nthreads 9)
[2025-11-25 15:34:05] Arguments: --nthreads 9
[2025-11-25 15:34:05] Threads: 9
[2025-11-25 15:34:05] Checking for CVMFS
[2025-11-25 15:34:05] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 15:34:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 15:34:05] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 15:34:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 15:34:06] 2.13.3.0 11048 29096 393424 153296 1 332 26653849 32935937 27379 16776704 0 79796268 99.424 117036075 37732 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 15:34:06] CVMFS is ok
[2025-11-25 15:34:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 15:34:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 15:34:06] Further information can be found at the LHC@home message board.
[2025-11-25 15:34:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 15:34:06] Checking for apptainer binary...
[2025-11-25 15:34:06] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 15:34:06] Running /usr/bin/apptainer --version
[2025-11-25 15:34:06] apptainer version 1.4.4-1.el9
[2025-11-25 15:34:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 15:34:06] c6-1-24-2.aglt2.org
[2025-11-25 15:34:06] apptainer works
[2025-11-25 15:34:06] Set ATHENA_PROC_NUMBER=9
[2025-11-25 15:34:06] Set ATHENA_CORE_NUMBER=9
[2025-11-25 15:34:06] Starting ATLAS job with PandaID=6895356039
[2025-11-25 15:34:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 06:08:04]  *** The last 200 lines of the pilot log: ***
[2025-11-26 06:08:04] 2025-11-26 11:07:20,681 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 06:08:04] 2025-11-26 11:07:20,681 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 06:08:04] 2025-11-26 11:07:20,714 | INFO     | fitting pss+swap vs Time
[2025-11-26 06:08:04] 2025-11-26 11:07:20,716 | INFO     | sum of square deviations: 195859998726.85883
[2025-11-26 06:08:04] 2025-11-26 11:07:20,756 | INFO     | sum of deviations: 1548455929632.8086
[2025-11-26 06:08:04] 2025-11-26 11:07:20,756 | INFO     | mean x: 1764129040.0128205
[2025-11-26 06:08:04] 2025-11-26 11:07:20,756 | INFO     | mean y: 3074512.653846154
[2025-11-26 06:08:04] 2025-11-26 11:07:20,756 | INFO     | intersect: -13944010601.212662
[2025-11-26 06:08:04] 2025-11-26 11:07:20,757 | INFO     | chi2: 8.376477828931211
[2025-11-26 06:08:04] 2025-11-26 11:07:20,767 | INFO     | sum of square deviations: 192456228452.84863
[2025-11-26 06:08:04] 2025-11-26 11:07:20,802 | INFO     | sum of deviations: 1859376196011.8977
[2025-11-26 06:08:04] 2025-11-26 11:07:20,802 | INFO     | mean x: 1764128887.5216882
[2025-11-26 06:08:04] 2025-11-26 11:07:20,803 | INFO     | mean y: 3088440.735052755
[2025-11-26 06:08:04] 2025-11-26 11:07:20,803 | INFO     | intersect: -17040679311.153603
[2025-11-26 06:08:04] 2025-11-26 11:07:20,804 | INFO     | chi2: 5.0968461828153995
[2025-11-26 06:08:04] 2025-11-26 11:07:20,804 | INFO     | current chi2=5.0968461828153995 (change=39.15287204352659 %)
[2025-11-26 06:08:04] 2025-11-26 11:07:20,805 | INFO     | sum of square deviations: 189092133341.20303
[2025-11-26 06:08:04] 2025-11-26 11:07:20,830 | INFO     | sum of deviations: 2095220051820.925
[2025-11-26 06:08:04] 2025-11-26 11:07:20,834 | INFO     | mean x: 1764128735.0306604
[2025-11-26 06:08:04] 2025-11-26 11:07:20,834 | INFO     | mean y: 3099120.849056604
[2025-11-26 06:08:04] 2025-11-26 11:07:20,835 | INFO     | intersect: -19544186291.39033
[2025-11-26 06:08:04] 2025-11-26 11:07:20,836 | INFO     | chi2: 2.9813420588864337
[2025-11-26 06:08:04] 2025-11-26 11:07:20,836 | INFO     | current chi2=2.9813420588864337 (change=41.50614022965084 %)
[2025-11-26 06:08:04] 2025-11-26 11:07:20,837 | INFO     | sum of square deviations: 185767377743.5727
[2025-11-26 06:08:04] 2025-11-26 11:07:20,862 | INFO     | sum of deviations: 2184398473681.013
[2025-11-26 06:08:04] 2025-11-26 11:07:20,862 | INFO     | mean x: 1764128582.5373666
[2025-11-26 06:08:04] 2025-11-26 11:07:20,866 | INFO     | mean y: 3103204.015421115
[2025-11-26 06:08:04] 2025-11-26 11:07:20,866 | INFO     | intersect: -20740903789.456825
[2025-11-26 06:08:04] 2025-11-26 11:07:20,867 | INFO     | chi2: 2.505280525829197
[2025-11-26 06:08:04] 2025-11-26 11:07:20,868 | INFO     | current chi2=2.505280525829197 (change=15.968027943598367 %)
[2025-11-26 06:08:04] 2025-11-26 11:07:20,868 | INFO     | right removable region: 842
[2025-11-26 06:08:04] 2025-11-26 11:07:20,869 | INFO     | sum of square deviations: 192455488768.89066
[2025-11-26 06:08:04] 2025-11-26 11:07:20,897 | INFO     | sum of deviations: 1293936983004.2659
[2025-11-26 06:08:04] 2025-11-26 11:07:20,898 | INFO     | mean x: 1764129192.520516
[2025-11-26 06:08:04] 2025-11-26 11:07:20,898 | INFO     | mean y: 3085897.2133645955
[2025-11-26 06:08:04] 2025-11-26 11:07:20,898 | INFO     | intersect: -11857693026.7948
[2025-11-26 06:08:04] 2025-11-26 11:07:20,899 | INFO     | chi2: 6.101119994205205
[2025-11-26 06:08:04] 2025-11-26 11:07:20,899 | INFO     | current chi2=6.101119994205205 (change=27.16365853518087 %)
[2025-11-26 06:08:04] 2025-11-26 11:07:20,900 | INFO     | sum of square deviations: 189090810444.48
[2025-11-26 06:08:04] 2025-11-26 11:07:20,925 | INFO     | sum of deviations: 1219170241581.9158
[2025-11-26 06:08:04] 2025-11-26 11:07:20,926 | INFO     | mean x: 1764129345.024764
[2025-11-26 06:08:04] 2025-11-26 11:07:20,926 | INFO     | mean y: 3089284.5754716983
[2025-11-26 06:08:04] 2025-11-26 11:07:20,926 | INFO     | intersect: -11371202224.884684
[2025-11-26 06:08:04] 2025-11-26 11:07:20,927 | INFO     | chi2: 6.020103503111465
[2025-11-26 06:08:04] 2025-11-26 11:07:20,927 | INFO     | current chi2=6.020103503111465 (change=1.3278953892185152 %)
[2025-11-26 06:08:04] 2025-11-26 11:07:20,927 | INFO     | left removable region: 20
[2025-11-26 06:08:04] 2025-11-26 11:07:20,932 | INFO     | sum of square deviations: 172226802100.95773
[2025-11-26 06:08:04] 2025-11-26 11:07:20,957 | INFO     | sum of deviations: 1761005442331.5667
[2025-11-26 06:08:04] 2025-11-26 11:07:20,958 | INFO     | mean x: 1764129162.0608273
[2025-11-26 06:08:04] 2025-11-26 11:07:20,958 | INFO     | mean y: 3123389.5486618006
[2025-11-26 06:08:04] 2025-11-26 11:07:20,958 | INFO     | intersect: -18034957893.2
[2025-11-26 06:08:04] 2025-11-26 11:07:20,959 | INFO     | chi2: 0.0748502045777088
[2025-11-26 06:08:04] 2025-11-26 11:07:20,959 | INFO     | current memory leak: 10.22 B/s (using 822 data points, chi2=0.07)
[2025-11-26 06:08:04] 2025-11-26 11:07:20,964 | INFO     | could have reported an average CPU frequency of 2958 MHz (32 samples)
[2025-11-26 06:08:04] 2025-11-26 11:07:20,964 | INFO     | ..............................
[2025-11-26 06:08:04] 2025-11-26 11:07:20,964 | INFO     | . Timing measurements:
[2025-11-26 06:08:04] 2025-11-26 11:07:20,965 | INFO     | . get job = 0 s
[2025-11-26 06:08:04] 2025-11-26 11:07:20,965 | INFO     | . initial setup = 2 s
[2025-11-26 06:08:04] 2025-11-26 11:07:20,965 | INFO     | . payload setup = 10 s
[2025-11-26 06:08:04] 2025-11-26 11:07:20,965 | INFO     | . stage-in = 0 s
[2025-11-26 06:08:04] 2025-11-26 11:07:20,965 | INFO     | . payload execution = 52307 s
[2025-11-26 06:08:04] 2025-11-26 11:07:20,965 | INFO     | . stage-out = 5 s
[2025-11-26 06:08:04] 2025-11-26 11:07:20,965 | INFO     | . log creation = 1 s
[2025-11-26 06:08:04] 2025-11-26 11:07:20,965 | INFO     | ..............................
[2025-11-26 06:08:04] 2025-11-26 11:07:21,278 | INFO     | 
[2025-11-26 06:08:04] 2025-11-26 11:07:21,278 | INFO     | job summary report
[2025-11-26 06:08:04] 2025-11-26 11:07:21,278 | INFO     | --------------------------------------------------
[2025-11-26 06:08:04] 2025-11-26 11:07:21,279 | INFO     | PanDA job id: 6895356039
[2025-11-26 06:08:04] 2025-11-26 11:07:21,279 | INFO     | task id: 47556137
[2025-11-26 06:08:04] 2025-11-26 11:07:21,279 | INFO     | errors: (none)
[2025-11-26 06:08:04] 2025-11-26 11:07:21,279 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 06:08:04] 2025-11-26 11:07:21,279 | INFO     | pilot state: finished 
[2025-11-26 06:08:04] 2025-11-26 11:07:21,279 | INFO     | transexitcode: 0
[2025-11-26 06:08:04] 2025-11-26 11:07:21,279 | INFO     | exeerrorcode: 0
[2025-11-26 06:08:04] 2025-11-26 11:07:21,279 | INFO     | exeerrordiag: 
[2025-11-26 06:08:04] 2025-11-26 11:07:21,279 | INFO     | exitcode: 0
[2025-11-26 06:08:04] 2025-11-26 11:07:21,279 | INFO     | exitmsg: OK
[2025-11-26 06:08:04] 2025-11-26 11:07:21,279 | INFO     | cpuconsumptiontime: 233735 s
[2025-11-26 06:08:04] 2025-11-26 11:07:21,279 | INFO     | nevents: 1000
[2025-11-26 06:08:04] 2025-11-26 11:07:21,279 | INFO     | neventsw: 0
[2025-11-26 06:08:04] 2025-11-26 11:07:21,280 | INFO     | pid: 1366118
[2025-11-26 06:08:04] 2025-11-26 11:07:21,280 | INFO     | pgrp: 1366118
[2025-11-26 06:08:04] 2025-11-26 11:07:21,280 | INFO     | corecount: 9
[2025-11-26 06:08:04] 2025-11-26 11:07:21,280 | INFO     | event service: False
[2025-11-26 06:08:04] 2025-11-26 11:07:21,280 | INFO     | sizes: {0: 2284037, 1: 2284292, 9: 2284554, 12: 2284582, 52319: 2333589, 52320: 2333588, 52325: 2342766, 52327: 2342822, 52361: 2343068}
[2025-11-26 06:08:04] 2025-11-26 11:07:21,280 | INFO     | --------------------------------------------------
[2025-11-26 06:08:04] 2025-11-26 11:07:21,280 | INFO     | 
[2025-11-26 06:08:04] 2025-11-26 11:07:21,280 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-11-26 06:08:04] 2025-11-26 11:07:21,331 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 06:08:04] 2025-11-26 11:07:21,331 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 06:08:04] 2025-11-26 11:07:21,331 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 06:08:04] 2025-11-26 11:07:21,331 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 06:08:04] 2025-11-26 11:07:21,331 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 06:08:04] 2025-11-26 11:07:21,331 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 06:08:04] 2025-11-26 11:07:21,331 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 06:08:04] 2025-11-26 11:07:21,331 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 06:08:04] 2025-11-26 11:07:21,331 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 06:08:04] 2025-11-26 11:07:21,332 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 06:08:04] 2025-11-26 11:07:21,332 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 06:08:04] 2025-11-26 11:07:21,332 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 06:08:04] 2025-11-26 11:07:21,332 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 06:08:04] 2025-11-26 11:07:21,332 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 06:08:04] 2025-11-26 11:07:21,332 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 06:08:04] 2025-11-26 11:07:21,332 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 06:08:04] 2025-11-26 11:07:21,332 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 06:08:04] 2025-11-26 11:07:21,332 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 06:08:04] 2025-11-26 11:07:21,332 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 06:08:04] 2025-11-26 11:07:21,332 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 06:08:04] 2025-11-26 11:07:21,332 | INFO     | job 6895356039 has completed (purged errors)
[2025-11-26 06:08:04] 2025-11-26 11:07:21,333 | INFO     | overall cleanup function is called
[2025-11-26 06:08:04] 2025-11-26 11:07:22,353 | INFO     | --- collectZombieJob: --- 10, [1366118]
[2025-11-26 06:08:04] 2025-11-26 11:07:22,353 | INFO     | zombie collector waiting for pid 1366118
[2025-11-26 06:08:04] 2025-11-26 11:07:22,353 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 06:08:04] 2025-11-26 11:07:22,354 | INFO     | collected zombie processes
[2025-11-26 06:08:04] 2025-11-26 11:07:22,354 | INFO     | will attempt to kill all subprocesses of pid=1366118
[2025-11-26 06:08:04] 2025-11-26 11:07:23,116 | INFO     | process IDs to be killed: [1366118] (in reverse order)
[2025-11-26 06:08:04] 2025-11-26 11:07:23,488 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 06:08:04] 2025-11-26 11:07:23,489 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 06:08:04] 2025-11-26 11:07:23,567 | INFO     | did not find any defunct processes belonging to 1366118
[2025-11-26 06:08:04] 2025-11-26 11:07:23,666 | INFO     | did not find any defunct processes belonging to 1366118
[2025-11-26 06:08:04] 2025-11-26 11:07:23,685 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 06:08:04] 2025-11-26 11:07:23,685 | INFO     | ready for new job
[2025-11-26 06:08:04] 2025-11-26 11:07:23,685 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 06:08:04] 2025-11-26 11:07:23,709 | INFO     | ***************************************
[2025-11-26 06:08:04] 2025-11-26 11:07:23,709 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 06:08:04] 2025-11-26 11:07:23,709 | INFO     | ***************************************
[2025-11-26 06:08:04] 2025-11-26 11:07:23,709 | INFO     | 
[2025-11-26 06:08:04] 2025-11-26 11:07:23,731 | INFO     | architecture information:
[2025-11-26 06:08:04] 2025-11-26 11:07:23,750 | INFO     | executing command: cat /etc/os-release
[2025-11-26 06:08:04] 2025-11-26 11:07:23,819 | INFO     | cat /etc/os-release:
[2025-11-26 06:08:04] NAME="CentOS Linux"
[2025-11-26 06:08:04] VERSION="7 (Core)"
[2025-11-26 06:08:04] ID="centos"
[2025-11-26 06:08:04] ID_LIKE="rhel fedora"
[2025-11-26 06:08:04] VERSION_ID="7"
[2025-11-26 06:08:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 06:08:04] ANSI_COLOR="0;31"
[2025-11-26 06:08:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 06:08:04] HOME_URL="https://www.centos.org/"
[2025-11-26 06:08:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 06:08:04] 
[2025-11-26 06:08:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 06:08:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 06:08:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 06:08:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 06:08:04] 
[2025-11-26 06:08:04] 2025-11-26 11:07:23,820 | INFO     | ***************************************
[2025-11-26 06:08:04] 2025-11-26 11:07:24,325 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-11-26 06:08:04] 2025-11-26 11:07:24,450 | INFO     | sufficient remaining disk space (71843184640 B)
[2025-11-26 06:08:04] 2025-11-26 11:07:24,450 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 06:08:04] 2025-11-26 11:07:24,450 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 06:08:04] 2025-11-26 11:07:24,450 | INFO     | update_server=False
[2025-11-26 06:08:04] 2025-11-26 11:07:24,451 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 06:08:04] 2025-11-26 11:07:24,452 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 06:08:04] 2025-11-26 11:07:24,464 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 06:08:04] 2025-11-26 11:07:24,464 | INFO     | aborting loop
[2025-11-26 06:08:04] 2025-11-26 11:07:24,533 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 06:08:04] 2025-11-26 11:07:24,672 | INFO     | all job control threads have been joined
[2025-11-26 06:08:04] 2025-11-26 11:07:24,672 | INFO     | all payload control threads have been joined
[2025-11-26 06:08:04] 2025-11-26 11:07:25,214 | INFO     | all data control threads have been joined
[2025-11-26 06:08:04] 2025-11-26 11:07:25,458 | INFO     | [job] retrieve thread has finished
[2025-11-26 06:08:04] 2025-11-26 11:07:25,469 | INFO     | [job] job monitor thread has finished
[2025-11-26 06:08:04] 2025-11-26 11:07:25,501 | INFO     | [payload] failed_post thread has finished
[2025-11-26 06:08:04] 2025-11-26 11:07:25,678 | INFO     | [job] control thread has finished
[2025-11-26 06:08:04] 2025-11-26 11:07:25,679 | INFO     | [payload] control thread has finished
[2025-11-26 06:08:04] 2025-11-26 11:07:25,819 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 06:08:04] 2025-11-26 11:07:25,848 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 06:08:04] 2025-11-26 11:07:26,033 | INFO     | [payload] validate_post thread has finished
[2025-11-26 06:08:04] 2025-11-26 11:07:26,226 | INFO     | [data] control thread has finished
[2025-11-26 06:08:04] 2025-11-26 11:07:26,294 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 06:08:04] 2025-11-26 11:07:26,459 | INFO     | [data] copytool_out thread has finished
[2025-11-26 06:08:04] 2025-11-26 11:07:26,774 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 06:08:04] 2025-11-26 11:07:26,801 | INFO     | [job] validate thread has finished
[2025-11-26 06:08:04] 2025-11-26 11:07:26,831 | INFO     | [data] copytool_in thread has finished
[2025-11-26 06:08:04] 2025-11-26 11:07:26,917 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 06:08:04] 2025-11-26 11:07:27,306 | INFO     | [job] queue monitor thread has finished
[2025-11-26 06:08:04] 2025-11-26 11:07:28,552 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 06:08:04] 2025-11-26 11:07:54,880 | INFO     | PID=1359216 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 06:08:04] 2025-11-26 11:07:54,881 | INFO     | .. there are 38 such processes running
[2025-11-26 06:08:04] 2025-11-26 11:07:54,881 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 06:08:04] 2025-11-26 11:07:54,881 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 06:08:04] 2025-11-26 11:07:54,882 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 06:08:04] 2025-11-26 11:07:55,940 | INFO     | [monitor] cgroup control has ended
[2025-11-26 06:08:04] 2025-11-26 11:07:57,682 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140107471148864)>', '<ExcThread(monitor, started 140106958612224)>']
[2025-11-26 06:08:04] 2025-11-26 11:07:57,923 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 06:08:04] 2025-11-26 11:07:57,923 | INFO     | [monitor] control thread has ended
[2025-11-26 06:08:04] 2025-11-26 11:08:02,708 | INFO     | all workflow threads have been joined
[2025-11-26 06:08:04] 2025-11-26 11:08:02,709 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 06:08:04] 2025-11-26 11:08:02,710 | INFO     | traces error code: 0
[2025-11-26 06:08:04] 2025-11-26 11:08:02,710 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 06:08:04] 2025-11-26 11:08:03,880 [wrapper] ==== pilot stdout END ====
[2025-11-26 06:08:04] 2025-11-26 11:08:03,891 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 06:08:04] 2025-11-26 11:08:03,944 [wrapper] pilotpid: 1359216
[2025-11-26 06:08:04] 2025-11-26 11:08:03,973 [wrapper] Pilot exit status: 0
[2025-11-26 06:08:04] 2025-11-26 11:08:03,993 [wrapper] pandaids: 6895356039
[2025-11-26 06:08:04] 2025-11-26 11:08:04,103 [wrapper] cleanup supervisor_pilot 4083055 1359217
[2025-11-26 06:08:04] 2025-11-26 11:08:04,107 [wrapper] Test setup, not cleaning
[2025-11-26 06:08:04] 2025-11-26 11:08:04,112 [wrapper] apfmon messages muted
[2025-11-26 06:08:04] 2025-11-26 11:08:04,116 [wrapper] ==== wrapper stdout END ====
[2025-11-26 06:08:04] 2025-11-26 11:08:04,119 [wrapper] ==== wrapper stderr END ====
[2025-11-26 06:08:04]  *** Error codes and diagnostics ***
[2025-11-26 06:08:04]     "exeErrorCode": 0,
[2025-11-26 06:08:04]     "exeErrorDiag": "",
[2025-11-26 06:08:04]     "pilotErrorCode": 0,
[2025-11-26 06:08:04]     "pilotErrorDiag": "",
[2025-11-26 06:08:04]  *** Listing of results directory ***
[2025-11-26 06:08:04] total 1314632
[2025-11-26 06:08:04] -rw-r--r--. 1 boincer umatlas    576529 Nov 23 04:19 pilot3.tar.gz
[2025-11-26 06:08:04] -rwx------. 1 boincer umatlas     36292 Nov 23 05:16 runpilot2-wrapper.sh
[2025-11-26 06:08:04] -rw-r--r--. 1 boincer umatlas      5112 Nov 23 05:16 queuedata.json
[2025-11-26 06:08:04] -rw-r--r--. 1 boincer umatlas       100 Nov 25 15:34 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 06:08:04] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 15:34 run_atlas
[2025-11-26 06:08:04] -rw-r--r--. 1 boincer umatlas       105 Nov 25 15:34 job.xml
[2025-11-26 06:08:04] -rw-r--r--. 2 boincer umatlas 408521806 Nov 25 15:34 EVNT.47483658._000687.pool.root.1
[2025-11-26 06:08:04] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 15:34 shared
[2025-11-26 06:08:04] -rw-r--r--. 2 boincer umatlas    590091 Nov 25 15:34 input.tar.gz
[2025-11-26 06:08:04] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 15:34 start_atlas.sh
[2025-11-26 06:08:04] -rw-r--r--. 1 boincer umatlas         0 Nov 25 15:34 boinc_lockfile
[2025-11-26 06:08:04] -rw-r--r--. 1 boincer umatlas      2785 Nov 25 15:34 pandaJob.out
[2025-11-26 06:08:04] -rw-------. 1 boincer umatlas        57 Nov 25 15:34 setup.sh.local
[2025-11-26 06:08:04] -rw-------. 1 boincer umatlas    991893 Nov 25 15:34 agis_schedconf.cvmfs.json
[2025-11-26 06:08:04] drwx------. 5 boincer umatlas      4096 Nov 25 15:34 pilot3
[2025-11-26 06:08:04] -rw-r--r--. 1 boincer umatlas       533 Nov 26 05:49 boinc_task_state.xml
[2025-11-26 06:08:04] -rw-r--r--. 1 boincer umatlas      6846 Nov 26 06:01 init_data.xml
[2025-11-26 06:08:04] -rw-------. 1 boincer umatlas 916079365 Nov 26 06:05 HITS.47556137._006822.pool.root.1
[2025-11-26 06:08:04] -rw-------. 1 boincer umatlas      1058 Nov 26 06:06 memory_monitor_summary.json
[2025-11-26 06:08:04] -rw-------. 1 boincer umatlas   1516240 Nov 26 06:06 agis_ddmendpoints.agis.ALL.json
[2025-11-26 06:08:04] -rw-------. 1 boincer umatlas   2140768 Nov 26 06:06 log.47556137._006822.job.log.tgz.1
[2025-11-26 06:08:04] -rw-------. 1 boincer umatlas      8623 Nov 26 06:07 heartbeat.json
[2025-11-26 06:08:04] -rw-------. 1 boincer umatlas        95 Nov 26 06:07 pilot_heartbeat.json
[2025-11-26 06:08:04] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 06:08 boinc_mmap_file
[2025-11-26 06:08:04] -rw-------. 1 boincer umatlas      4824 Nov 26 06:08 pilotlog.txt
[2025-11-26 06:08:04] -rw-r--r--. 1 boincer umatlas        29 Nov 26 06:08 wrapper_checkpoint.txt
[2025-11-26 06:08:04] -rw-------. 1 boincer umatlas   6690412 Nov 26 06:08 log.47556137._006822.job.log.1
[2025-11-26 06:08:04] -rw-------. 1 boincer umatlas       353 Nov 26 06:08 output.list
[2025-11-26 06:08:04] -rw-r--r--. 1 boincer umatlas       620 Nov 26 06:08 runtime_log
[2025-11-26 06:08:04] -rw-------. 1 boincer umatlas   8847360 Nov 26 06:08 result.tar.gz
[2025-11-26 06:08:04] -rw-r--r--. 1 boincer umatlas      9348 Nov 26 06:08 runtime_log.err
[2025-11-26 06:08:04] -rw-------. 1 boincer umatlas       661 Nov 26 06:08 jVaKDmyJMh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm4UIKDmnPi7em.diag
[2025-11-26 06:08:04] -rw-r--r--. 1 boincer umatlas     21147 Nov 26 06:08 stderr.txt
[2025-11-26 06:08:04] HITS file was successfully produced:
[2025-11-26 06:08:04] -rw-------. 1 boincer umatlas 916079365 Nov 26 06:05 shared/HITS.pool.root.1
[2025-11-26 06:08:04]  *** Contents of shared directory: ***
[2025-11-26 06:08:04] total 1302804
[2025-11-26 06:08:04] -rw-r--r--. 2 boincer umatlas 408521806 Nov 25 15:34 ATLAS.root_0
[2025-11-26 06:08:04] -rw-r--r--. 2 boincer umatlas    590091 Nov 25 15:34 input.tar.gz
[2025-11-26 06:08:04] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 15:34 start_atlas.sh
[2025-11-26 06:08:04] -rw-------. 1 boincer umatlas 916079365 Nov 26 06:05 HITS.pool.root.1
[2025-11-26 06:08:04] -rw-------. 1 boincer umatlas   8847360 Nov 26 06:08 result.tar.gz
06:08:06 (1354865): run_atlas exited; CPU time 234906.469088
06:08:06 (1354865): called boinc_finish(0)

</stderr_txt>
]]>

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