Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:04:17 (992491): wrapper (7.7.26015): starting
00:04:17 (992491): wrapper: running run_atlas (--nthreads 12)
[2025-11-24 00:04:17] Arguments: --nthreads 12
[2025-11-24 00:04:17] Threads: 12
[2025-11-24 00:04:17] Checking for CVMFS
[2025-11-24 00:04:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 00:04:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 00:04:18] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 00:04:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 00:04:20] 2.13.2.0 8445 32015 222280 153233 2 364 34677308 40960000 20978 16776704 0 64852144 99.787 32926276 37084 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-24 00:04:20] CVMFS is ok
[2025-11-24 00:04:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 00:04:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 00:04:20] Further information can be found at the LHC@home message board.
[2025-11-24 00:04:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 00:04:20] Checking for apptainer binary...
[2025-11-24 00:04:20] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 00:04:20] Running /usr/bin/apptainer --version
[2025-11-24 00:04:20] apptainer version 1.4.4-1.el9
[2025-11-24 00:04:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 00:04:21] c-212-2.aglt2.org
[2025-11-24 00:04:21] apptainer works
[2025-11-24 00:04:21] Set ATHENA_PROC_NUMBER=12
[2025-11-24 00:04:21] Set ATHENA_CORE_NUMBER=12
[2025-11-24 00:04:21] Starting ATLAS job with PandaID=6895348861
[2025-11-24 00:04:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 04:28:56]  *** The last 200 lines of the pilot log: ***
[2025-11-25 04:28:56] 2025-11-25 09:28:05,987 | INFO     | time since job start (102136s) is within the limit (172800.0s)
[2025-11-25 04:28:56] 2025-11-25 09:28:07,455 | INFO     | monitor loop #6584: job 0:6895348861 is in state 'finished'
[2025-11-25 04:28:56] 2025-11-25 09:28:07,455 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 04:28:56] 2025-11-25 09:28:08,001 | INFO     | time since job start (102139s) is within the limit (172800.0s)
[2025-11-25 04:28:56] 2025-11-25 09:28:09,961 | INFO     | monitor loop #6585: job 0:6895348861 is in state 'finished'
[2025-11-25 04:28:56] 2025-11-25 09:28:09,965 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 04:28:56] 2025-11-25 09:28:10,010 | INFO     | time since job start (102141s) is within the limit (172800.0s)
[2025-11-25 04:28:56] 2025-11-25 09:28:12,019 | INFO     | time since job start (102143s) is within the limit (172800.0s)
[2025-11-25 04:28:56] 2025-11-25 09:28:12,476 | INFO     | monitor loop #6586: job 0:6895348861 is in state 'finished'
[2025-11-25 04:28:56] 2025-11-25 09:28:12,476 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 04:28:56] 2025-11-25 09:28:14,030 | INFO     | time since job start (102145s) is within the limit (172800.0s)
[2025-11-25 04:28:56] 2025-11-25 09:28:14,981 | INFO     | monitor loop #6587: job 0:6895348861 is in state 'finished'
[2025-11-25 04:28:56] 2025-11-25 09:28:14,984 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 04:28:56] 2025-11-25 09:28:16,041 | INFO     | time since job start (102147s) is within the limit (172800.0s)
[2025-11-25 04:28:56] 2025-11-25 09:28:17,493 | INFO     | monitor loop #6588: job 0:6895348861 is in state 'finished'
[2025-11-25 04:28:56] 2025-11-25 09:28:17,493 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 04:28:56] 2025-11-25 09:28:18,073 | INFO     | time since job start (102149s) is within the limit (172800.0s)
[2025-11-25 04:28:56] 2025-11-25 09:28:18,353 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-25 04:28:56] 2025-11-25 09:28:18,364 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2922.6537187500003
[2025-11-25 04:28:56] 2025-11-25 09:28:18,377 | INFO     | using path: /tmp/boinchome/slots/7/PanDA_Pilot-6895348861/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 04:28:56] 2025-11-25 09:28:18,379 | INFO     | extracted standard info from prmon json
[2025-11-25 04:28:56] 2025-11-25 09:28:18,380 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 04:28:56] 2025-11-25 09:28:18,380 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 04:28:56] 2025-11-25 09:28:18,526 | INFO     | fitting pss+swap vs Time
[2025-11-25 04:28:56] 2025-11-25 09:28:18,529 | INFO     | sum of square deviations: 1446724945341.839
[2025-11-25 04:28:56] 2025-11-25 09:28:18,669 | INFO     | sum of deviations: 13509848957513.484
[2025-11-25 04:28:56] 2025-11-25 09:28:18,670 | INFO     | mean x: 1764011859.466188
[2025-11-25 04:28:56] 2025-11-25 09:28:18,676 | INFO     | mean y: 3518409.724715739
[2025-11-25 04:28:56] 2025-11-25 09:28:18,676 | INFO     | intersect: -16469228436.442144
[2025-11-25 04:28:56] 2025-11-25 09:28:18,678 | INFO     | chi2: 24.731530108074107
[2025-11-25 04:28:56] 2025-11-25 09:28:18,679 | INFO     | sum of square deviations: 1433777615248.8386
[2025-11-25 04:28:56] 2025-11-25 09:28:18,800 | INFO     | sum of deviations: 14181397687608.809
[2025-11-25 04:28:56] 2025-11-25 09:28:18,800 | INFO     | mean x: 1764011706.9735894
[2025-11-25 04:28:56] 2025-11-25 09:28:18,801 | INFO     | mean y: 3526316.81332533
[2025-11-25 04:28:56] 2025-11-25 09:28:18,801 | INFO     | intersect: -17444194498.557655
[2025-11-25 04:28:56] 2025-11-25 09:28:18,802 | INFO     | chi2: 21.612799355939643
[2025-11-25 04:28:56] 2025-11-25 09:28:18,802 | INFO     | current chi2=21.612799355939643 (change=12.610342904405625 %)
[2025-11-25 04:28:56] 2025-11-25 09:28:18,802 | INFO     | right removable region: 1665
[2025-11-25 04:28:56] 2025-11-25 09:28:18,808 | INFO     | sum of square deviations: 1433775101438.8374
[2025-11-25 04:28:56] 2025-11-25 09:28:18,930 | INFO     | sum of deviations: 12629995273650.992
[2025-11-25 04:28:56] 2025-11-25 09:28:18,930 | INFO     | mean x: 1764012011.9735894
[2025-11-25 04:28:56] 2025-11-25 09:28:18,930 | INFO     | mean y: 3528771.25030012
[2025-11-25 04:28:56] 2025-11-25 09:28:18,930 | INFO     | intersect: -15535493598.11006
[2025-11-25 04:28:56] 2025-11-25 09:28:18,936 | INFO     | chi2: 19.696956626081178
[2025-11-25 04:28:56] 2025-11-25 09:28:18,936 | INFO     | current chi2=19.696956626081178 (change=20.356902545020013 %)
[2025-11-25 04:28:56] 2025-11-25 09:28:18,936 | INFO     | left removable region: 10
[2025-11-25 04:28:56] 2025-11-25 09:28:18,937 | INFO     | sum of square deviations: 1405560898159.5867
[2025-11-25 04:28:56] 2025-11-25 09:28:19,344 | INFO     | sum of deviations: 12525225187582.908
[2025-11-25 04:28:56] 2025-11-25 09:28:19,344 | INFO     | mean x: 1764011981.4900303
[2025-11-25 04:28:56] 2025-11-25 09:28:19,344 | INFO     | mean y: 3547255.4501510574
[2025-11-25 04:28:56] 2025-11-25 09:28:19,344 | INFO     | intersect: -15715904908.2286
[2025-11-25 04:28:56] 2025-11-25 09:28:19,364 | INFO     | chi2: 12.039760385995953
[2025-11-25 04:28:56] 2025-11-25 09:28:19,365 | INFO     | current memory leak: 8.91 B/s (using 1655 data points, chi2=12.04)
[2025-11-25 04:28:56] 2025-11-25 09:28:19,386 | INFO     | could have reported an average CPU frequency of 3079 MHz (59 samples)
[2025-11-25 04:28:56] 2025-11-25 09:28:19,386 | INFO     | ..............................
[2025-11-25 04:28:56] 2025-11-25 09:28:19,386 | INFO     | . Timing measurements:
[2025-11-25 04:28:56] 2025-11-25 09:28:19,386 | INFO     | . get job = 0 s
[2025-11-25 04:28:56] 2025-11-25 09:28:19,386 | INFO     | . initial setup = 7 s
[2025-11-25 04:28:56] 2025-11-25 09:28:19,386 | INFO     | . payload setup = 58 s
[2025-11-25 04:28:56] 2025-11-25 09:28:19,386 | INFO     | . stage-in = 0 s
[2025-11-25 04:28:56] 2025-11-25 09:28:19,386 | INFO     | . payload execution = 101965 s
[2025-11-25 04:28:56] 2025-11-25 09:28:19,386 | INFO     | . stage-out = 11 s
[2025-11-25 04:28:56] 2025-11-25 09:28:19,387 | INFO     | . log creation = 2 s
[2025-11-25 04:28:56] 2025-11-25 09:28:19,387 | INFO     | ..............................
[2025-11-25 04:28:56] 2025-11-25 09:28:19,638 | INFO     | 
[2025-11-25 04:28:56] 2025-11-25 09:28:19,638 | INFO     | job summary report
[2025-11-25 04:28:56] 2025-11-25 09:28:19,638 | INFO     | --------------------------------------------------
[2025-11-25 04:28:56] 2025-11-25 09:28:19,638 | INFO     | PanDA job id: 6895348861
[2025-11-25 04:28:56] 2025-11-25 09:28:19,638 | INFO     | task id: 47556137
[2025-11-25 04:28:56] 2025-11-25 09:28:19,638 | INFO     | errors: (none)
[2025-11-25 04:28:56] 2025-11-25 09:28:19,638 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 04:28:56] 2025-11-25 09:28:19,639 | INFO     | pilot state: finished 
[2025-11-25 04:28:56] 2025-11-25 09:28:19,639 | INFO     | transexitcode: 0
[2025-11-25 04:28:56] 2025-11-25 09:28:19,639 | INFO     | exeerrorcode: 0
[2025-11-25 04:28:56] 2025-11-25 09:28:19,639 | INFO     | exeerrordiag: 
[2025-11-25 04:28:56] 2025-11-25 09:28:19,639 | INFO     | exitcode: 0
[2025-11-25 04:28:56] 2025-11-25 09:28:19,639 | INFO     | exitmsg: OK
[2025-11-25 04:28:56] 2025-11-25 09:28:19,639 | INFO     | cpuconsumptiontime: 211760 s
[2025-11-25 04:28:56] 2025-11-25 09:28:19,639 | INFO     | nevents: 1000
[2025-11-25 04:28:56] 2025-11-25 09:28:19,639 | INFO     | neventsw: 0
[2025-11-25 04:28:56] 2025-11-25 09:28:19,639 | INFO     | pid: 1019902
[2025-11-25 04:28:56] 2025-11-25 09:28:19,639 | INFO     | pgrp: 1019902
[2025-11-25 04:28:56] 2025-11-25 09:28:19,639 | INFO     | corecount: 12
[2025-11-25 04:28:56] 2025-11-25 09:28:19,640 | INFO     | event service: False
[2025-11-25 04:28:56] 2025-11-25 09:28:19,640 | INFO     | sizes: {0: 2298528, 1: 2298612, 2: 2298811, 3: 2298811, 13: 2298839, 24: 2298895, 35: 2299051, 38: 2299341, 46: 2299369, 102026: 2372935, 102027: 2372934, 102040: 
[2025-11-25 04:28:56] 2025-11-25 09:28:19,640 | INFO     | --------------------------------------------------
[2025-11-25 04:28:56] 2025-11-25 09:28:19,640 | INFO     | 
[2025-11-25 04:28:56] 2025-11-25 09:28:19,640 | INFO     | executing command: ls -lF /tmp/boinchome/slots/7
[2025-11-25 04:28:56] 2025-11-25 09:28:19,743 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 04:28:56] 2025-11-25 09:28:19,744 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 04:28:56] 2025-11-25 09:28:19,744 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 04:28:56] 2025-11-25 09:28:19,744 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 04:28:56] 2025-11-25 09:28:19,744 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 04:28:56] 2025-11-25 09:28:19,744 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 04:28:56] 2025-11-25 09:28:19,744 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 04:28:56] 2025-11-25 09:28:19,744 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 04:28:56] 2025-11-25 09:28:19,744 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 04:28:56] 2025-11-25 09:28:19,744 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 04:28:56] 2025-11-25 09:28:19,744 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 04:28:56] 2025-11-25 09:28:19,745 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 04:28:56] 2025-11-25 09:28:19,745 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 04:28:56] 2025-11-25 09:28:19,745 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 04:28:56] 2025-11-25 09:28:19,745 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 04:28:56] 2025-11-25 09:28:19,745 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 04:28:56] 2025-11-25 09:28:19,745 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 04:28:56] 2025-11-25 09:28:19,745 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 04:28:56] 2025-11-25 09:28:19,745 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 04:28:56] 2025-11-25 09:28:19,745 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 04:28:56] 2025-11-25 09:28:19,745 | INFO     | job 6895348861 has completed (purged errors)
[2025-11-25 04:28:56] 2025-11-25 09:28:19,745 | INFO     | overall cleanup function is called
[2025-11-25 04:28:56] 2025-11-25 09:28:20,803 | INFO     | --- collectZombieJob: --- 10, [1019902]
[2025-11-25 04:28:56] 2025-11-25 09:28:20,803 | INFO     | zombie collector waiting for pid 1019902
[2025-11-25 04:28:56] 2025-11-25 09:28:20,803 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 04:28:56] 2025-11-25 09:28:20,803 | INFO     | collected zombie processes
[2025-11-25 04:28:56] 2025-11-25 09:28:20,803 | INFO     | will attempt to kill all subprocesses of pid=1019902
[2025-11-25 04:28:56] 2025-11-25 09:28:22,893 | INFO     | process IDs to be killed: [1019902] (in reverse order)
[2025-11-25 04:28:56] 2025-11-25 09:28:23,578 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 04:28:56] 2025-11-25 09:28:23,579 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 04:28:56] 2025-11-25 09:28:23,648 | INFO     | did not find any defunct processes belonging to 1019902
[2025-11-25 04:28:56] 2025-11-25 09:28:23,691 | INFO     | did not find any defunct processes belonging to 1019902
[2025-11-25 04:28:56] 2025-11-25 09:28:23,695 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 04:28:56] 2025-11-25 09:28:23,696 | INFO     | ready for new job
[2025-11-25 04:28:56] 2025-11-25 09:28:23,696 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 04:28:56] 2025-11-25 09:28:23,708 | INFO     | ***************************************
[2025-11-25 04:28:56] 2025-11-25 09:28:23,708 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 04:28:56] 2025-11-25 09:28:23,708 | INFO     | ***************************************
[2025-11-25 04:28:56] 2025-11-25 09:28:23,709 | INFO     | 
[2025-11-25 04:28:56] 2025-11-25 09:28:23,718 | INFO     | architecture information:
[2025-11-25 04:28:56] 2025-11-25 09:28:23,718 | INFO     | executing command: cat /etc/os-release
[2025-11-25 04:28:56] 2025-11-25 09:28:23,798 | INFO     | cat /etc/os-release:
[2025-11-25 04:28:56] NAME="CentOS Linux"
[2025-11-25 04:28:56] VERSION="7 (Core)"
[2025-11-25 04:28:56] ID="centos"
[2025-11-25 04:28:56] ID_LIKE="rhel fedora"
[2025-11-25 04:28:56] VERSION_ID="7"
[2025-11-25 04:28:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 04:28:56] ANSI_COLOR="0;31"
[2025-11-25 04:28:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 04:28:56] HOME_URL="https://www.centos.org/"
[2025-11-25 04:28:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 04:28:56] 
[2025-11-25 04:28:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 04:28:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 04:28:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 04:28:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 04:28:56] 
[2025-11-25 04:28:56] 2025-11-25 09:28:23,798 | INFO     | ***************************************
[2025-11-25 04:28:56] 2025-11-25 09:28:24,302 | INFO     | executing command: df -mP /tmp/boinchome/slots/7
[2025-11-25 04:28:56] 2025-11-25 09:28:24,435 | INFO     | sufficient remaining disk space (123077656576 B)
[2025-11-25 04:28:56] 2025-11-25 09:28:24,435 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 04:28:56] 2025-11-25 09:28:24,436 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 04:28:56] 2025-11-25 09:28:24,436 | INFO     | update_server=False
[2025-11-25 04:28:56] 2025-11-25 09:28:24,436 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 04:28:56] 2025-11-25 09:28:24,436 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 04:28:56] 2025-11-25 09:28:24,436 | INFO     | aborting loop
[2025-11-25 04:28:56] 2025-11-25 09:28:24,564 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 04:28:56] 2025-11-25 09:28:24,654 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 04:28:56] 2025-11-25 09:28:24,750 | INFO     | all data control threads have been joined
[2025-11-25 04:28:56] 2025-11-25 09:28:25,442 | INFO     | [job] retrieve thread has finished
[2025-11-25 04:28:56] 2025-11-25 09:28:25,442 | INFO     | [job] job monitor thread has finished
[2025-11-25 04:28:56] 2025-11-25 09:28:25,570 | INFO     | all payload control threads have been joined
[2025-11-25 04:28:56] 2025-11-25 09:28:25,661 | INFO     | [job] queue monitor thread has finished
[2025-11-25 04:28:56] 2025-11-25 09:28:25,756 | INFO     | [data] control thread has finished
[2025-11-25 04:28:56] 2025-11-25 09:28:25,906 | INFO     | [payload] validate_post thread has finished
[2025-11-25 04:28:56] 2025-11-25 09:28:26,136 | INFO     | all job control threads have been joined
[2025-11-25 04:28:56] 2025-11-25 09:28:26,153 | INFO     | [job] validate thread has finished
[2025-11-25 04:28:56] 2025-11-25 09:28:26,172 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 04:28:56] 2025-11-25 09:28:26,201 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 04:28:56] 2025-11-25 09:28:26,209 | INFO     | [payload] failed_post thread has finished
[2025-11-25 04:28:56] 2025-11-25 09:28:26,359 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 04:28:56] 2025-11-25 09:28:26,576 | INFO     | [data] copytool_out thread has finished
[2025-11-25 04:28:56] 2025-11-25 09:28:26,576 | INFO     | [payload] control thread has finished
[2025-11-25 04:28:56] 2025-11-25 09:28:26,636 | INFO     | [data] copytool_in thread has finished
[2025-11-25 04:28:56] 2025-11-25 09:28:26,877 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 04:28:56] 2025-11-25 09:28:27,144 | INFO     | [job] control thread has finished
[2025-11-25 04:28:56] 2025-11-25 09:28:27,212 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 04:28:56] 2025-11-25 09:28:31,266 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 04:28:56] 2025-11-25 09:28:46,716 | INFO     | [monitor] cgroup control has ended
[2025-11-25 04:28:56] 2025-11-25 09:28:48,059 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139959709431616)>', '<ExcThread(monitor, started 139959218464512)>']
[2025-11-25 04:28:56] 2025-11-25 09:28:52,048 | INFO     | PID=1000503 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-25 04:28:56] 2025-11-25 09:28:52,049 | INFO     | .. there are 18 such processes running
[2025-11-25 04:28:56] 2025-11-25 09:28:52,049 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 04:28:56] 2025-11-25 09:28:52,050 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 04:28:56] 2025-11-25 09:28:52,050 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 04:28:56] 2025-11-25 09:28:52,050 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 04:28:56] 2025-11-25 09:28:52,050 | INFO     | [monitor] control thread has ended
[2025-11-25 04:28:56] 2025-11-25 09:28:53,085 | INFO     | all workflow threads have been joined
[2025-11-25 04:28:56] 2025-11-25 09:28:53,085 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 04:28:56] 2025-11-25 09:28:53,085 | INFO     | traces error code: 0
[2025-11-25 04:28:56] 2025-11-25 09:28:53,086 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 04:28:56] 2025-11-25 09:28:54,334 [wrapper] ==== pilot stdout END ====
[2025-11-25 04:28:56] 2025-11-25 09:28:54,428 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 04:28:56] 2025-11-25 09:28:54,442 [wrapper] pilotpid: 1000503
[2025-11-25 04:28:56] 2025-11-25 09:28:54,444 [wrapper] Pilot exit status: 0
[2025-11-25 04:28:56] 2025-11-25 09:28:54,503 [wrapper] pandaids: 6895348861
[2025-11-25 04:28:56] 2025-11-25 09:28:54,846 [wrapper] cleanup supervisor_pilot 1484570 1000504
[2025-11-25 04:28:56] 2025-11-25 09:28:54,861 [wrapper] Test setup, not cleaning
[2025-11-25 04:28:56] 2025-11-25 09:28:54,910 [wrapper] apfmon messages muted
[2025-11-25 04:28:56] 2025-11-25 09:28:54,914 [wrapper] ==== wrapper stdout END ====
[2025-11-25 04:28:56] 2025-11-25 09:28:54,917 [wrapper] ==== wrapper stderr END ====
[2025-11-25 04:28:56]  *** Error codes and diagnostics ***
[2025-11-25 04:28:56]     "exeErrorCode": 0,
[2025-11-25 04:28:56]     "exeErrorDiag": "",
[2025-11-25 04:28:56]     "pilotErrorCode": 0,
[2025-11-25 04:28:56]     "pilotErrorDiag": "",
[2025-11-25 04:28:56]  *** Listing of results directory ***
[2025-11-25 04:28:56] total 1337412
[2025-11-25 04:28:56] -rw-r--r--. 1 boincer umatlas    576529 Nov 22 14:25 pilot3.tar.gz
[2025-11-25 04:28:56] -rw-r--r--. 1 boincer umatlas      5112 Nov 22 14:59 queuedata.json
[2025-11-25 04:28:56] -rwx------. 1 boincer umatlas     36292 Nov 22 15:00 runpilot2-wrapper.sh
[2025-11-25 04:28:56] -rw-r--r--. 1 boincer umatlas       100 Nov 24 00:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 04:28:56] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 24 00:04 run_atlas
[2025-11-25 04:28:56] -rw-r--r--. 1 boincer umatlas       105 Nov 24 00:04 job.xml
[2025-11-25 04:28:56] -rw-r--r--. 2 boincer umatlas 411604180 Nov 24 00:04 EVNT.47483658._000486.pool.root.1
[2025-11-25 04:28:56] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 00:04 start_atlas.sh
[2025-11-25 04:28:56] drwxrwx--x. 2 boincer umatlas      4096 Nov 24 00:04 shared
[2025-11-25 04:28:56] -rw-r--r--. 2 boincer umatlas    590104 Nov 24 00:04 input.tar.gz
[2025-11-25 04:28:56] -rw-r--r--. 1 boincer umatlas         0 Nov 24 00:04 boinc_lockfile
[2025-11-25 04:28:56] -rw-r--r--. 1 boincer umatlas      2784 Nov 24 00:04 pandaJob.out
[2025-11-25 04:28:56] -rw-------. 1 boincer umatlas        57 Nov 24 00:04 setup.sh.local
[2025-11-25 04:28:56] -rw-------. 1 boincer umatlas    989786 Nov 24 00:05 agis_schedconf.cvmfs.json
[2025-11-25 04:28:56] drwx------. 5 boincer umatlas      4096 Nov 24 00:05 pilot3
[2025-11-25 04:28:56] -rw-r--r--. 1 boincer umatlas       533 Nov 25 04:17 boinc_task_state.xml
[2025-11-25 04:28:56] -rw-r--r--. 1 boincer umatlas      6948 Nov 25 04:22 init_data.xml
[2025-11-25 04:28:56] -rw-------. 1 boincer umatlas 920659114 Nov 25 04:26 HITS.47556137._004817.pool.root.1
[2025-11-25 04:28:56] -rw-------. 1 boincer umatlas      1071 Nov 25 04:27 memory_monitor_summary.json
[2025-11-25 04:28:56] -rw-------. 1 boincer umatlas   1516240 Nov 25 04:27 agis_ddmendpoints.agis.ALL.json
[2025-11-25 04:28:56] -rw-------. 1 boincer umatlas   3139899 Nov 25 04:27 log.47556137._004817.job.log.tgz.1
[2025-11-25 04:28:56] -rw-------. 1 boincer umatlas      8634 Nov 25 04:28 heartbeat.json
[2025-11-25 04:28:56] -rw-------. 1 boincer umatlas        95 Nov 25 04:28 pilot_heartbeat.json
[2025-11-25 04:28:56] -rw-------. 1 boincer umatlas      4825 Nov 25 04:28 pilotlog.txt
[2025-11-25 04:28:56] -rw-r--r--. 1 boincer umatlas      8192 Nov 25 04:28 boinc_mmap_file
[2025-11-25 04:28:56] -rw-------. 1 boincer umatlas  13521811 Nov 25 04:28 log.47556137._004817.job.log.1
[2025-11-25 04:28:56] -rw-r--r--. 1 boincer umatlas        29 Nov 25 04:28 wrapper_checkpoint.txt
[2025-11-25 04:28:56] -rw-------. 1 boincer umatlas       353 Nov 25 04:28 output.list
[2025-11-25 04:28:56] -rw-r--r--. 1 boincer umatlas       620 Nov 25 04:28 runtime_log
[2025-11-25 04:28:56] -rw-------. 1 boincer umatlas  16680960 Nov 25 04:28 result.tar.gz
[2025-11-25 04:28:56] -rw-r--r--. 1 boincer umatlas      9341 Nov 25 04:28 runtime_log.err
[2025-11-25 04:28:56] -rw-------. 1 boincer umatlas       667 Nov 25 04:28 N1BLDmix8g8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmmGIKDm0VOGPo.diag
[2025-11-25 04:28:56] -rw-r--r--. 1 boincer umatlas     21834 Nov 25 04:28 stderr.txt
[2025-11-25 04:28:56] HITS file was successfully produced:
[2025-11-25 04:28:56] -rw-------. 1 boincer umatlas 920659114 Nov 25 04:26 shared/HITS.pool.root.1
[2025-11-25 04:28:56]  *** Contents of shared directory: ***
[2025-11-25 04:28:56] total 1317940
[2025-11-25 04:28:56] -rw-r--r--. 2 boincer umatlas 411604180 Nov 24 00:04 ATLAS.root_0
[2025-11-25 04:28:56] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 00:04 start_atlas.sh
[2025-11-25 04:28:56] -rw-r--r--. 2 boincer umatlas    590104 Nov 24 00:04 input.tar.gz
[2025-11-25 04:28:56] -rw-------. 1 boincer umatlas 920659114 Nov 25 04:26 HITS.pool.root.1
[2025-11-25 04:28:56] -rw-------. 1 boincer umatlas  16680960 Nov 25 04:28 result.tar.gz
04:28:58 (992491): run_atlas exited; CPU time 212659.810063
04:28:58 (992491): called boinc_finish(0)

</stderr_txt>
]]>

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