Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:12:52 (2837402): wrapper (7.7.26015): starting
00:12:52 (2837402): wrapper: running run_atlas (--nthreads 8)
[2025-11-24 00:12:52] Arguments: --nthreads 8
[2025-11-24 00:12:52] Threads: 8
[2025-11-24 00:12:52] Checking for CVMFS
[2025-11-24 00:12:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 00:12:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 00:12:53] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 00:12:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 00:12:55] 2.13.3.0 11160 26734 327740 153234 0 144 28311043 32935936 24359 16776704 0 93254329 99.363 150024159 40666 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-24 00:12:55] CVMFS is ok
[2025-11-24 00:12:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 00:12:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 00:12:55] Further information can be found at the LHC@home message board.
[2025-11-24 00:12:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 00:12:55] Checking for apptainer binary...
[2025-11-24 00:12:55] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 00:12:55] Running /usr/bin/apptainer --version
[2025-11-24 00:12:55] apptainer version 1.4.4-1.el9
[2025-11-24 00:12:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 00:12:56] c6-2-29-2.aglt2.org
[2025-11-24 00:12:56] apptainer works
[2025-11-24 00:12:56] Set ATHENA_PROC_NUMBER=8
[2025-11-24 00:12:56] Set ATHENA_CORE_NUMBER=8
[2025-11-24 00:12:56] Starting ATLAS job with PandaID=6895356304
[2025-11-24 00:12:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 19:20:20]  *** The last 200 lines of the pilot log: ***
[2025-11-24 19:20:20] 2025-11-25 00:19:34,739 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 19:20:20] 2025-11-25 00:19:36,730 | INFO     | time since job start (68731s) is within the limit (172800.0s)
[2025-11-24 19:20:20] 2025-11-25 00:19:37,263 | INFO     | monitor loop #4061: job 0:6895356304 is in state 'finished'
[2025-11-24 19:20:20] 2025-11-25 00:19:37,268 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 19:20:20] 2025-11-25 00:19:38,738 | INFO     | time since job start (68733s) is within the limit (172800.0s)
[2025-11-24 19:20:20] 2025-11-25 00:19:39,888 | INFO     | monitor loop #4062: job 0:6895356304 is in state 'finished'
[2025-11-24 19:20:20] 2025-11-25 00:19:39,888 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 19:20:20] 2025-11-25 00:19:40,793 | INFO     | PID=2843614 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-24 19:20:20] 2025-11-25 00:19:40,794 | INFO     | .. there are 38 such processes running
[2025-11-24 19:20:20] 2025-11-25 00:19:41,637 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-24 19:20:20] 2025-11-25 00:19:41,650 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 3064.715089285714
[2025-11-24 19:20:20] 2025-11-25 00:19:41,659 | INFO     | using path: /tmp/boinchome/slots/6/PanDA_Pilot-6895356304/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 19:20:20] 2025-11-25 00:19:41,659 | INFO     | extracted standard info from prmon json
[2025-11-24 19:20:20] 2025-11-25 00:19:41,659 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 19:20:20] 2025-11-25 00:19:41,659 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 19:20:20] 2025-11-25 00:19:41,675 | INFO     | fitting pss+swap vs Time
[2025-11-24 19:20:20] 2025-11-25 00:19:41,677 | INFO     | sum of square deviations: 440220865443.3504
[2025-11-24 19:20:20] 2025-11-25 00:19:41,719 | INFO     | sum of deviations: 3867858990967.725
[2025-11-24 19:20:20] 2025-11-25 00:19:41,719 | INFO     | mean x: 1763995639.3612099
[2025-11-24 19:20:20] 2025-11-25 00:19:41,719 | INFO     | mean y: 2866692.466192171
[2025-11-24 19:20:20] 2025-11-25 00:19:41,719 | INFO     | intersect: -15495913418.421389
[2025-11-24 19:20:20] 2025-11-25 00:19:41,729 | INFO     | chi2: 16.440664950115487
[2025-11-24 19:20:20] 2025-11-25 00:19:41,730 | INFO     | sum of square deviations: 434372014263.47076
[2025-11-24 19:20:20] 2025-11-25 00:19:41,773 | INFO     | sum of deviations: 4250768751089.273
[2025-11-24 19:20:20] 2025-11-25 00:19:41,774 | INFO     | mean x: 1763995486.878463
[2025-11-24 19:20:20] 2025-11-25 00:19:41,777 | INFO     | mean y: 2876677.641644325
[2025-11-24 19:20:20] 2025-11-25 00:19:41,777 | INFO     | intersect: -17259600292.47301
[2025-11-24 19:20:20] 2025-11-25 00:19:41,778 | INFO     | chi2: 13.202554389188188
[2025-11-24 19:20:20] 2025-11-25 00:19:41,779 | INFO     | current chi2=13.202554389188188 (change=19.69573962338155 %)
[2025-11-24 19:20:20] 2025-11-25 00:19:41,779 | INFO     | right removable region: 1118
[2025-11-24 19:20:20] 2025-11-25 00:19:41,780 | INFO     | sum of square deviations: 434369366863.4709
[2025-11-24 19:20:20] 2025-11-25 00:19:41,800 | INFO     | time since job start (68736s) is within the limit (172800.0s)
[2025-11-24 19:20:20] 2025-11-25 00:19:41,822 | INFO     | sum of deviations: 3424254502539.7163
[2025-11-24 19:20:20] 2025-11-25 00:19:41,828 | INFO     | mean x: 1763995791.878463
[2025-11-24 19:20:20] 2025-11-25 00:19:41,828 | INFO     | mean y: 2878252.8141197497
[2025-11-24 19:20:20] 2025-11-25 00:19:41,828 | INFO     | intersect: -13903191082.640476
[2025-11-24 19:20:20] 2025-11-25 00:19:41,830 | INFO     | chi2: 12.28616167024132
[2025-11-24 19:20:20] 2025-11-25 00:19:41,830 | INFO     | current chi2=12.28616167024132 (change=25.269679130861334 %)
[2025-11-24 19:20:20] 2025-11-25 00:19:41,831 | INFO     | sum of square deviations: 428569915770.4207
[2025-11-24 19:20:20] 2025-11-25 00:19:41,871 | INFO     | sum of deviations: 3042500054089.7153
[2025-11-24 19:20:20] 2025-11-25 00:19:41,871 | INFO     | mean x: 1763995944.3958707
[2025-11-24 19:20:20] 2025-11-25 00:19:41,871 | INFO     | mean y: 2888291.8078994616
[2025-11-24 19:20:20] 2025-11-25 00:19:41,871 | INFO     | intersect: -12520057343.773027
[2025-11-24 19:20:20] 2025-11-25 00:19:41,873 | INFO     | chi2: 9.378317891462757
[2025-11-24 19:20:20] 2025-11-25 00:19:41,873 | INFO     | current chi2=9.378317891462757 (change=23.667634016421406 %)
[2025-11-24 19:20:20] 2025-11-25 00:19:41,873 | INFO     | left removable region: 20
[2025-11-24 19:20:20] 2025-11-25 00:19:41,874 | INFO     | sum of square deviations: 410362704670.7694
[2025-11-24 19:20:20] 2025-11-25 00:19:41,894 | INFO     | sum of deviations: 2895160648766.0854
[2025-11-24 19:20:20] 2025-11-25 00:19:41,894 | INFO     | mean x: 1763996066.4417121
[2025-11-24 19:20:20] 2025-11-25 00:19:41,894 | INFO     | mean y: 2916966.509107468
[2025-11-24 19:20:20] 2025-11-25 00:19:41,895 | INFO     | intersect: -12442297810.592909
[2025-11-24 19:20:20] 2025-11-25 00:19:41,896 | INFO     | chi2: 1.4960573763937042
[2025-11-24 19:20:20] 2025-11-25 00:19:41,896 | INFO     | current memory leak: 7.06 B/s (using 1098 data points, chi2=1.50)
[2025-11-24 19:20:20] 2025-11-25 00:19:41,897 | INFO     | could have reported an average CPU frequency of 3058 MHz (41 samples)
[2025-11-24 19:20:20] 2025-11-25 00:19:41,897 | INFO     | ..............................
[2025-11-24 19:20:20] 2025-11-25 00:19:41,897 | INFO     | . Timing measurements:
[2025-11-24 19:20:20] 2025-11-25 00:19:41,897 | INFO     | . get job = 0 s
[2025-11-24 19:20:20] 2025-11-25 00:19:41,898 | INFO     | . initial setup = 7 s
[2025-11-24 19:20:20] 2025-11-25 00:19:41,898 | INFO     | . payload setup = 42 s
[2025-11-24 19:20:20] 2025-11-25 00:19:41,898 | INFO     | . stage-in = 0 s
[2025-11-24 19:20:20] 2025-11-25 00:19:41,898 | INFO     | . payload execution = 68593 s
[2025-11-24 19:20:20] 2025-11-25 00:19:41,898 | INFO     | . stage-out = 6 s
[2025-11-24 19:20:20] 2025-11-25 00:19:41,898 | INFO     | . log creation = 1 s
[2025-11-24 19:20:20] 2025-11-25 00:19:41,898 | INFO     | ..............................
[2025-11-24 19:20:20] 2025-11-25 00:19:42,207 | INFO     | 
[2025-11-24 19:20:20] 2025-11-25 00:19:42,208 | INFO     | job summary report
[2025-11-24 19:20:20] 2025-11-25 00:19:42,208 | INFO     | --------------------------------------------------
[2025-11-24 19:20:20] 2025-11-25 00:19:42,208 | INFO     | PanDA job id: 6895356304
[2025-11-24 19:20:20] 2025-11-25 00:19:42,208 | INFO     | task id: 47556137
[2025-11-24 19:20:20] 2025-11-25 00:19:42,208 | INFO     | errors: (none)
[2025-11-24 19:20:20] 2025-11-25 00:19:42,208 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 19:20:20] 2025-11-25 00:19:42,208 | INFO     | pilot state: finished 
[2025-11-24 19:20:20] 2025-11-25 00:19:42,208 | INFO     | transexitcode: 0
[2025-11-24 19:20:20] 2025-11-25 00:19:42,208 | INFO     | exeerrorcode: 0
[2025-11-24 19:20:20] 2025-11-25 00:19:42,208 | INFO     | exeerrordiag: 
[2025-11-24 19:20:20] 2025-11-25 00:19:42,212 | INFO     | exitcode: 0
[2025-11-24 19:20:20] 2025-11-25 00:19:42,212 | INFO     | exitmsg: OK
[2025-11-24 19:20:20] 2025-11-25 00:19:42,212 | INFO     | cpuconsumptiontime: 225891 s
[2025-11-24 19:20:20] 2025-11-25 00:19:42,212 | INFO     | nevents: 1000
[2025-11-24 19:20:20] 2025-11-25 00:19:42,212 | INFO     | neventsw: 0
[2025-11-24 19:20:20] 2025-11-25 00:19:42,212 | INFO     | pid: 2873101
[2025-11-24 19:20:20] 2025-11-25 00:19:42,212 | INFO     | pgrp: 2873101
[2025-11-24 19:20:20] 2025-11-25 00:19:42,212 | INFO     | corecount: 8
[2025-11-24 19:20:20] 2025-11-25 00:19:42,212 | INFO     | event service: False
[2025-11-24 19:20:20] 2025-11-25 00:19:42,212 | INFO     | sizes: {0: 2298635, 1: 2298834, 12: 2298834, 23: 2298862, 32: 2299152, 34: 2299180, 68640: 2355362, 68646: 2365147, 68647: 2365203, 68672: 2365545}
[2025-11-24 19:20:20] 2025-11-25 00:19:42,212 | INFO     | --------------------------------------------------
[2025-11-24 19:20:20] 2025-11-25 00:19:42,213 | INFO     | 
[2025-11-24 19:20:20] 2025-11-25 00:19:42,213 | INFO     | executing command: ls -lF /tmp/boinchome/slots/6
[2025-11-24 19:20:20] 2025-11-25 00:19:42,258 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 19:20:20] 2025-11-25 00:19:42,272 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 19:20:20] 2025-11-25 00:19:42,273 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 19:20:20] 2025-11-25 00:19:42,274 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 19:20:20] 2025-11-25 00:19:42,274 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 19:20:20] 2025-11-25 00:19:42,274 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 19:20:20] 2025-11-25 00:19:42,274 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 19:20:20] 2025-11-25 00:19:42,274 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 19:20:20] 2025-11-25 00:19:42,274 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 19:20:20] 2025-11-25 00:19:42,274 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 19:20:20] 2025-11-25 00:19:42,274 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 19:20:20] 2025-11-25 00:19:42,274 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 19:20:20] 2025-11-25 00:19:42,274 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 19:20:20] 2025-11-25 00:19:42,274 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 19:20:20] 2025-11-25 00:19:42,274 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 19:20:20] 2025-11-25 00:19:42,274 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 19:20:20] 2025-11-25 00:19:42,274 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 19:20:20] 2025-11-25 00:19:42,274 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 19:20:20] 2025-11-25 00:19:42,275 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 19:20:20] 2025-11-25 00:19:42,275 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 19:20:20] 2025-11-25 00:19:42,275 | INFO     | job 6895356304 has completed (purged errors)
[2025-11-24 19:20:20] 2025-11-25 00:19:42,275 | INFO     | overall cleanup function is called
[2025-11-24 19:20:20] 2025-11-25 00:19:43,329 | INFO     | --- collectZombieJob: --- 10, [2873101]
[2025-11-24 19:20:20] 2025-11-25 00:19:43,329 | INFO     | zombie collector waiting for pid 2873101
[2025-11-24 19:20:20] 2025-11-25 00:19:43,329 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 19:20:20] 2025-11-25 00:19:43,329 | INFO     | collected zombie processes
[2025-11-24 19:20:20] 2025-11-25 00:19:43,329 | INFO     | will attempt to kill all subprocesses of pid=2873101
[2025-11-24 19:20:20] 2025-11-25 00:19:44,724 | INFO     | process IDs to be killed: [2873101] (in reverse order)
[2025-11-24 19:20:20] 2025-11-25 00:19:45,022 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 19:20:20] 2025-11-25 00:19:45,022 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 19:20:20] 2025-11-25 00:19:45,041 | INFO     | did not find any defunct processes belonging to 2873101
[2025-11-24 19:20:20] 2025-11-25 00:19:45,062 | INFO     | did not find any defunct processes belonging to 2873101
[2025-11-24 19:20:20] 2025-11-25 00:19:45,073 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 19:20:20] 2025-11-25 00:19:45,073 | INFO     | ready for new job
[2025-11-24 19:20:20] 2025-11-25 00:19:45,073 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 19:20:20] 2025-11-25 00:19:45,083 | INFO     | ***************************************
[2025-11-24 19:20:20] 2025-11-25 00:19:45,083 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 19:20:20] 2025-11-25 00:19:45,083 | INFO     | ***************************************
[2025-11-24 19:20:20] 2025-11-25 00:19:45,083 | INFO     | 
[2025-11-24 19:20:20] 2025-11-25 00:19:45,090 | INFO     | architecture information:
[2025-11-24 19:20:20] 2025-11-25 00:19:45,095 | INFO     | executing command: cat /etc/os-release
[2025-11-24 19:20:20] 2025-11-25 00:19:45,127 | INFO     | cat /etc/os-release:
[2025-11-24 19:20:20] NAME="CentOS Linux"
[2025-11-24 19:20:20] VERSION="7 (Core)"
[2025-11-24 19:20:20] ID="centos"
[2025-11-24 19:20:20] ID_LIKE="rhel fedora"
[2025-11-24 19:20:20] VERSION_ID="7"
[2025-11-24 19:20:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 19:20:20] ANSI_COLOR="0;31"
[2025-11-24 19:20:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 19:20:20] HOME_URL="https://www.centos.org/"
[2025-11-24 19:20:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 19:20:20] 
[2025-11-24 19:20:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 19:20:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 19:20:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 19:20:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 19:20:20] 
[2025-11-24 19:20:20] 2025-11-25 00:19:45,128 | INFO     | ***************************************
[2025-11-24 19:20:20] 2025-11-25 00:19:45,638 | INFO     | executing command: df -mP /tmp/boinchome/slots/6
[2025-11-24 19:20:20] 2025-11-25 00:19:45,785 | INFO     | sufficient remaining disk space (72181874688 B)
[2025-11-24 19:20:20] 2025-11-25 00:19:45,786 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 19:20:20] 2025-11-25 00:19:45,786 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 19:20:20] 2025-11-25 00:19:45,786 | INFO     | update_server=False
[2025-11-24 19:20:20] 2025-11-25 00:19:45,786 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 19:20:20] 2025-11-25 00:19:45,787 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 19:20:20] 2025-11-25 00:19:45,787 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 19:20:20] 2025-11-25 00:19:45,862 | INFO     | all payload control threads have been joined
[2025-11-24 19:20:20] 2025-11-25 00:19:45,918 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 19:20:20] 2025-11-25 00:19:45,918 | INFO     | aborting loop
[2025-11-24 19:20:20] 2025-11-25 00:19:46,204 | INFO     | all job control threads have been joined
[2025-11-24 19:20:20] 2025-11-25 00:19:46,507 | INFO     | all data control threads have been joined
[2025-11-24 19:20:20] 2025-11-25 00:19:46,795 | INFO     | [job] retrieve thread has finished
[2025-11-24 19:20:20] 2025-11-25 00:19:46,812 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 19:20:20] 2025-11-25 00:19:46,868 | INFO     | [payload] control thread has finished
[2025-11-24 19:20:20] 2025-11-25 00:19:46,924 | INFO     | [job] job monitor thread has finished
[2025-11-24 19:20:20] 2025-11-25 00:19:46,958 | INFO     | [payload] validate_post thread has finished
[2025-11-24 19:20:20] 2025-11-25 00:19:47,205 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 19:20:20] 2025-11-25 00:19:47,210 | INFO     | [job] control thread has finished
[2025-11-24 19:20:20] 2025-11-25 00:19:47,341 | INFO     | [job] validate thread has finished
[2025-11-24 19:20:20] 2025-11-25 00:19:47,348 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 19:20:20] 2025-11-25 00:19:47,388 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 19:20:20] 2025-11-25 00:19:47,424 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 19:20:20] 2025-11-25 00:19:47,454 | INFO     | [payload] failed_post thread has finished
[2025-11-24 19:20:20] 2025-11-25 00:19:47,513 | INFO     | [data] control thread has finished
[2025-11-24 19:20:20] 2025-11-25 00:19:47,801 | INFO     | [data] copytool_out thread has finished
[2025-11-24 19:20:20] 2025-11-25 00:19:48,212 | INFO     | [job] queue monitor thread has finished
[2025-11-24 19:20:20] 2025-11-25 00:19:48,302 | INFO     | [data] copytool_in thread has finished
[2025-11-24 19:20:20] 2025-11-25 00:19:49,803 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 19:20:20] 2025-11-25 00:20:11,475 | INFO     | [monitor] cgroup control has ended
[2025-11-24 19:20:20] 2025-11-25 00:20:13,251 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139819560441664)>', '<ExcThread(monitor, started 139818600216320)>']
[2025-11-24 19:20:20] 2025-11-25 00:20:15,826 | INFO     | PID=2843614 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-24 19:20:20] 2025-11-25 00:20:15,826 | INFO     | .. there are 38 such processes running
[2025-11-24 19:20:20] 2025-11-25 00:20:15,826 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 19:20:20] 2025-11-25 00:20:15,828 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 19:20:20] 2025-11-25 00:20:15,828 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 19:20:20] 2025-11-25 00:20:15,828 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 19:20:20] 2025-11-25 00:20:15,828 | INFO     | [monitor] control thread has ended
[2025-11-24 19:20:20] 2025-11-25 00:20:18,277 | INFO     | all workflow threads have been joined
[2025-11-24 19:20:20] 2025-11-25 00:20:18,277 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 19:20:20] 2025-11-25 00:20:18,278 | INFO     | traces error code: 0
[2025-11-24 19:20:20] 2025-11-25 00:20:18,278 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 19:20:20] 2025-11-25 00:20:19,022 [wrapper] ==== pilot stdout END ====
[2025-11-24 19:20:20] 2025-11-25 00:20:19,041 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 19:20:20] 2025-11-25 00:20:19,056 [wrapper] pilotpid: 2843614
[2025-11-24 19:20:20] 2025-11-25 00:20:19,076 [wrapper] Pilot exit status: 0
[2025-11-24 19:20:20] 2025-11-25 00:20:19,165 [wrapper] pandaids: 6895356304
[2025-11-24 19:20:20] 2025-11-25 00:20:19,359 [wrapper] cleanup supervisor_pilot 2416987 2843615
[2025-11-24 19:20:20] 2025-11-25 00:20:19,368 [wrapper] Test setup, not cleaning
[2025-11-24 19:20:20] 2025-11-25 00:20:19,382 [wrapper] apfmon messages muted
[2025-11-24 19:20:20] 2025-11-25 00:20:19,417 [wrapper] ==== wrapper stdout END ====
[2025-11-24 19:20:20] 2025-11-25 00:20:19,520 [wrapper] ==== wrapper stderr END ====
[2025-11-24 19:20:20]  *** Error codes and diagnostics ***
[2025-11-24 19:20:20]     "exeErrorCode": 0,
[2025-11-24 19:20:20]     "exeErrorDiag": "",
[2025-11-24 19:20:20]     "pilotErrorCode": 0,
[2025-11-24 19:20:20]     "pilotErrorDiag": "",
[2025-11-24 19:20:20]  *** Listing of results directory ***
[2025-11-24 19:20:20] total 1315676
[2025-11-24 19:20:20] -rw-r--r--. 1 boincer umatlas    576529 Nov 23 05:16 pilot3.tar.gz
[2025-11-24 19:20:20] -rw-r--r--. 1 boincer umatlas      5112 Nov 23 06:02 queuedata.json
[2025-11-24 19:20:20] -rwx------. 1 boincer umatlas     36292 Nov 23 06:02 runpilot2-wrapper.sh
[2025-11-24 19:20:20] -rw-r--r--. 1 boincer umatlas       100 Nov 24 00:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 19:20:20] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 24 00:12 run_atlas
[2025-11-24 19:20:20] -rw-r--r--. 1 boincer umatlas       105 Nov 24 00:12 job.xml
[2025-11-24 19:20:20] -rw-r--r--. 2 boincer umatlas 408419347 Nov 24 00:12 EVNT.47483658._000697.pool.root.1
[2025-11-24 19:20:20] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 00:12 start_atlas.sh
[2025-11-24 19:20:20] drwxrwx--x. 2 boincer umatlas      4096 Nov 24 00:12 shared
[2025-11-24 19:20:20] -rw-r--r--. 2 boincer umatlas    590102 Nov 24 00:12 input.tar.gz
[2025-11-24 19:20:20] -rw-r--r--. 1 boincer umatlas         0 Nov 24 00:12 boinc_lockfile
[2025-11-24 19:20:20] -rw-r--r--. 1 boincer umatlas      2785 Nov 24 00:12 pandaJob.out
[2025-11-24 19:20:20] -rw-------. 1 boincer umatlas        57 Nov 24 00:12 setup.sh.local
[2025-11-24 19:20:20] -rw-------. 1 boincer umatlas    989786 Nov 24 00:13 agis_schedconf.cvmfs.json
[2025-11-24 19:20:20] drwx------. 5 boincer umatlas      4096 Nov 24 00:14 pilot3
[2025-11-24 19:20:20] -rw-r--r--. 1 boincer umatlas       533 Nov 24 19:02 boinc_task_state.xml
[2025-11-24 19:20:20] -rw-------. 1 boincer umatlas 913331282 Nov 24 19:18 HITS.47556137._006925.pool.root.1
[2025-11-24 19:20:20] -rw-------. 1 boincer umatlas      1063 Nov 24 19:19 memory_monitor_summary.json
[2025-11-24 19:20:20] -rw-r--r--. 1 boincer umatlas      6845 Nov 24 19:19 init_data.xml
[2025-11-24 19:20:20] -rw-------. 1 boincer umatlas   1516227 Nov 24 19:19 agis_ddmendpoints.agis.ALL.json
[2025-11-24 19:20:20] -rw-------. 1 boincer umatlas   2224530 Nov 24 19:19 log.47556137._006925.job.log.tgz.1
[2025-11-24 19:20:20] -rw-------. 1 boincer umatlas        95 Nov 24 19:19 pilot_heartbeat.json
[2025-11-24 19:20:20] -rw-------. 1 boincer umatlas      8629 Nov 24 19:19 heartbeat.json
[2025-11-24 19:20:20] -rw-r--r--. 1 boincer umatlas      8192 Nov 24 19:20 boinc_mmap_file
[2025-11-24 19:20:20] -rw-r--r--. 1 boincer umatlas        29 Nov 24 19:20 wrapper_checkpoint.txt
[2025-11-24 19:20:20] -rw-------. 1 boincer umatlas      4824 Nov 24 19:20 pilotlog.txt
[2025-11-24 19:20:20] -rw-------. 1 boincer umatlas   8567797 Nov 24 19:20 log.47556137._006925.job.log.1
[2025-11-24 19:20:20] -rw-------. 1 boincer umatlas       353 Nov 24 19:20 output.list
[2025-11-24 19:20:20] -rw-r--r--. 1 boincer umatlas       620 Nov 24 19:20 runtime_log
[2025-11-24 19:20:20] -rw-------. 1 boincer umatlas  10813440 Nov 24 19:20 result.tar.gz
[2025-11-24 19:20:20] -rw-r--r--. 1 boincer umatlas      9348 Nov 24 19:20 runtime_log.err
[2025-11-24 19:20:20] -rw-------. 1 boincer umatlas       661 Nov 24 19:20 CL4MDm32Mh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmjoKKDmpdupfm.diag
[2025-11-24 19:20:20] -rw-r--r--. 1 boincer umatlas     21669 Nov 24 19:20 stderr.txt
[2025-11-24 19:20:20] HITS file was successfully produced:
[2025-11-24 19:20:20] -rw-------. 1 boincer umatlas 913331282 Nov 24 19:18 shared/HITS.pool.root.1
[2025-11-24 19:20:20]  *** Contents of shared directory: ***
[2025-11-24 19:20:20] total 1301936
[2025-11-24 19:20:20] -rw-r--r--. 2 boincer umatlas 408419347 Nov 24 00:12 ATLAS.root_0
[2025-11-24 19:20:20] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 00:12 start_atlas.sh
[2025-11-24 19:20:20] -rw-r--r--. 2 boincer umatlas    590102 Nov 24 00:12 input.tar.gz
[2025-11-24 19:20:20] -rw-------. 1 boincer umatlas 913331282 Nov 24 19:18 HITS.pool.root.1
[2025-11-24 19:20:20] -rw-------. 1 boincer umatlas  10813440 Nov 24 19:20 result.tar.gz
19:20:21 (2837402): run_atlas exited; CPU time 227257.741202
19:20:21 (2837402): called boinc_finish(0)

</stderr_txt>
]]>

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