Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
00:05:22 (23035): wrapper (7.7.26015): starting
00:05:22 (23035): wrapper: running run_atlas (--nthreads 8)
[2025-11-24 00:05:22] Arguments: --nthreads 8
[2025-11-24 00:05:22] Threads: 8
[2025-11-24 00:05:22] Checking for CVMFS
[2025-11-24 00:05:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 00:05:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 00:05:23] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 00:05:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 00:05:23] 2.11.2.0 2822 69976 85120 153233 0 81 15151947 20275200 1 130560 0 19604939 99.864 4119821 31699 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-24 00:05:23] CVMFS is ok
[2025-11-24 00:05:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 00:05:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 00:05:23] Further information can be found at the LHC@home message board.
[2025-11-24 00:05:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 00:05:23] Checking for apptainer binary...
[2025-11-24 00:05:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 00:05:23] Running /usr/bin/apptainer --version
[2025-11-24 00:05:23] apptainer version 1.3.2-1.el7
[2025-11-24 00:05:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 00:05:25] c-204-37.aglt2.org
[2025-11-24 00:05:25] apptainer works
[2025-11-24 00:05:25] Set ATHENA_PROC_NUMBER=8
[2025-11-24 00:05:25] Set ATHENA_CORE_NUMBER=8
[2025-11-24 00:05:25] Starting ATLAS job with PandaID=6894268419
[2025-11-24 00:05:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 12:22:02]  *** The last 200 lines of the pilot log: ***
[2025-11-24 12:22:02] 2025-11-24 17:21:27,355 | INFO     | monitor loop #3214: job 0:6894268419 is in state 'finished'
[2025-11-24 12:22:02] 2025-11-24 17:21:27,355 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 12:22:02] 2025-11-24 17:21:28,470 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-24 12:22:02] 2025-11-24 17:21:28,474 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1679.25
[2025-11-24 12:22:02] 2025-11-24 17:21:28,476 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6894268419/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 12:22:02] 2025-11-24 17:21:28,477 | INFO     | extracted standard info from prmon json
[2025-11-24 12:22:02] 2025-11-24 17:21:28,477 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 12:22:02] 2025-11-24 17:21:28,477 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 12:22:02] 2025-11-24 17:21:28,490 | INFO     | fitting pss+swap vs Time
[2025-11-24 12:22:02] 2025-11-24 17:21:28,491 | INFO     | sum of square deviations: 117190940607.1698
[2025-11-24 12:22:02] 2025-11-24 17:21:28,502 | INFO     | sum of deviations: 805104022869.7892
[2025-11-24 12:22:02] 2025-11-24 17:21:28,502 | INFO     | mean x: 1763982796.626556
[2025-11-24 12:22:02] 2025-11-24 17:21:28,502 | INFO     | mean y: 2860021.1881051175
[2025-11-24 12:22:02] 2025-11-24 17:21:28,503 | INFO     | intersect: -12115735823.1587
[2025-11-24 12:22:02] 2025-11-24 17:21:28,503 | INFO     | chi2: 5.900281684077605
[2025-11-24 12:22:02] 2025-11-24 17:21:28,504 | INFO     | sum of square deviations: 114776512567.69351
[2025-11-24 12:22:02] 2025-11-24 17:21:28,515 | INFO     | sum of deviations: 1026618071272.1309
[2025-11-24 12:22:02] 2025-11-24 17:21:28,515 | INFO     | mean x: 1763982644.1309192
[2025-11-24 12:22:02] 2025-11-24 17:21:28,515 | INFO     | mean y: 2874006.9986072425
[2025-11-24 12:22:02] 2025-11-24 17:21:28,516 | INFO     | intersect: -15775061908.305788
[2025-11-24 12:22:02] 2025-11-24 17:21:28,516 | INFO     | chi2: 3.122370063048933
[2025-11-24 12:22:02] 2025-11-24 17:21:28,516 | INFO     | current chi2=3.122370063048933 (change=47.081000022847974 %)
[2025-11-24 12:22:02] 2025-11-24 17:21:28,517 | INFO     | sum of square deviations: 112395480503.18942
[2025-11-24 12:22:02] 2025-11-24 17:21:28,528 | INFO     | sum of deviations: 1122647679136.7153
[2025-11-24 12:22:02] 2025-11-24 17:21:28,528 | INFO     | mean x: 1763982491.6353436
[2025-11-24 12:22:02] 2025-11-24 17:21:28,528 | INFO     | mean y: 2880152.360448808
[2025-11-24 12:22:02] 2025-11-24 17:21:28,528 | INFO     | intersect: -17616430174.05453
[2025-11-24 12:22:02] 2025-11-24 17:21:28,529 | INFO     | chi2: 2.4905519142435626
[2025-11-24 12:22:02] 2025-11-24 17:21:28,529 | INFO     | current chi2=2.4905519142435626 (change=20.235210306507113 %)
[2025-11-24 12:22:02] 2025-11-24 17:21:28,529 | INFO     | right removable region: 712
[2025-11-24 12:22:02] 2025-11-24 17:21:28,530 | INFO     | sum of square deviations: 114776236237.69347
[2025-11-24 12:22:02] 2025-11-24 17:21:28,540 | INFO     | sum of deviations: 611248876328.8823
[2025-11-24 12:22:02] 2025-11-24 17:21:28,541 | INFO     | mean x: 1763982949.1309192
[2025-11-24 12:22:02] 2025-11-24 17:21:28,541 | INFO     | mean y: 2872241.586350975
[2025-11-24 12:22:02] 2025-11-24 17:21:28,541 | INFO     | intersect: -9391342369.935139
[2025-11-24 12:22:02] 2025-11-24 17:21:28,542 | INFO     | chi2: 3.655296304916157
[2025-11-24 12:22:02] 2025-11-24 17:21:28,542 | INFO     | current chi2=3.655296304916157 (change=38.04878308131839 %)
[2025-11-24 12:22:02] 2025-11-24 17:21:28,543 | INFO     | sum of square deviations: 112394971397.45888
[2025-11-24 12:22:02] 2025-11-24 17:21:28,553 | INFO     | sum of deviations: 563128791428.1622
[2025-11-24 12:22:02] 2025-11-24 17:21:28,553 | INFO     | mean x: 1763983101.6339412
[2025-11-24 12:22:02] 2025-11-24 17:21:28,553 | INFO     | mean y: 2875323.935483871
[2025-11-24 12:22:02] 2025-11-24 17:21:28,553 | INFO     | intersect: -8835150610.606289
[2025-11-24 12:22:02] 2025-11-24 17:21:28,554 | INFO     | chi2: 3.5942997256997953
[2025-11-24 12:22:02] 2025-11-24 17:21:28,554 | INFO     | current chi2=3.5942997256997953 (change=1.6687177762942236 %)
[2025-11-24 12:22:02] 2025-11-24 17:21:28,554 | INFO     | left removable region: 20
[2025-11-24 12:22:02] 2025-11-24 17:21:28,555 | INFO     | sum of square deviations: 102753776881.54915
[2025-11-24 12:22:02] 2025-11-24 17:21:28,565 | INFO     | sum of deviations: 809354366841.1904
[2025-11-24 12:22:02] 2025-11-24 17:21:28,565 | INFO     | mean x: 1763983071.1445086
[2025-11-24 12:22:02] 2025-11-24 17:21:28,565 | INFO     | mean y: 2901362.7080924856
[2025-11-24 12:22:02] 2025-11-24 17:21:28,565 | INFO     | intersect: -13891355811.999256
[2025-11-24 12:22:02] 2025-11-24 17:21:28,566 | INFO     | chi2: 0.10041353619169248
[2025-11-24 12:22:02] 2025-11-24 17:21:28,566 | INFO     | current memory leak: 7.88 B/s (using 692 data points, chi2=0.10)
[2025-11-24 12:22:02] 2025-11-24 17:21:28,567 | INFO     | could have reported an average CPU frequency of 2186 MHz (27 samples)
[2025-11-24 12:22:02] 2025-11-24 17:21:28,567 | INFO     | ..............................
[2025-11-24 12:22:02] 2025-11-24 17:21:28,568 | INFO     | . Timing measurements:
[2025-11-24 12:22:02] 2025-11-24 17:21:28,568 | INFO     | . get job = 0 s
[2025-11-24 12:22:02] 2025-11-24 17:21:28,568 | INFO     | . initial setup = 2 s
[2025-11-24 12:22:02] 2025-11-24 17:21:28,568 | INFO     | . payload setup = 9 s
[2025-11-24 12:22:02] 2025-11-24 17:21:28,568 | INFO     | . stage-in = 0 s
[2025-11-24 12:22:02] 2025-11-24 17:21:28,568 | INFO     | . payload execution = 44102 s
[2025-11-24 12:22:02] 2025-11-24 17:21:28,568 | INFO     | . stage-out = 3 s
[2025-11-24 12:22:02] 2025-11-24 17:21:28,568 | INFO     | . log creation = 0 s
[2025-11-24 12:22:02] 2025-11-24 17:21:28,569 | INFO     | ..............................
[2025-11-24 12:22:02] 2025-11-24 17:21:28,777 | INFO     | time since job start (44146s) is within the limit (172800.0s)
[2025-11-24 12:22:02] 2025-11-24 17:21:29,099 | INFO     | 
[2025-11-24 12:22:02] 2025-11-24 17:21:29,099 | INFO     | job summary report
[2025-11-24 12:22:02] 2025-11-24 17:21:29,099 | INFO     | --------------------------------------------------
[2025-11-24 12:22:02] 2025-11-24 17:21:29,099 | INFO     | PanDA job id: 6894268419
[2025-11-24 12:22:02] 2025-11-24 17:21:29,100 | INFO     | task id: 47533967
[2025-11-24 12:22:02] 2025-11-24 17:21:29,100 | INFO     | errors: (none)
[2025-11-24 12:22:02] 2025-11-24 17:21:29,100 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 12:22:02] 2025-11-24 17:21:29,100 | INFO     | pilot state: finished 
[2025-11-24 12:22:02] 2025-11-24 17:21:29,100 | INFO     | transexitcode: 0
[2025-11-24 12:22:02] 2025-11-24 17:21:29,100 | INFO     | exeerrorcode: 0
[2025-11-24 12:22:02] 2025-11-24 17:21:29,101 | INFO     | exeerrordiag: 
[2025-11-24 12:22:02] 2025-11-24 17:21:29,101 | INFO     | exitcode: 0
[2025-11-24 12:22:02] 2025-11-24 17:21:29,101 | INFO     | exitmsg: OK
[2025-11-24 12:22:02] 2025-11-24 17:21:29,101 | INFO     | cpuconsumptiontime: 342627 s
[2025-11-24 12:22:02] 2025-11-24 17:21:29,101 | INFO     | nevents: 1000
[2025-11-24 12:22:02] 2025-11-24 17:21:29,101 | INFO     | neventsw: 0
[2025-11-24 12:22:02] 2025-11-24 17:21:29,102 | INFO     | pid: 1755
[2025-11-24 12:22:02] 2025-11-24 17:21:29,102 | INFO     | pgrp: 1755
[2025-11-24 12:22:02] 2025-11-24 17:21:29,102 | INFO     | corecount: 8
[2025-11-24 12:22:02] 2025-11-24 17:21:29,102 | INFO     | event service: False
[2025-11-24 12:22:02] 2025-11-24 17:21:29,102 | INFO     | sizes: {0: 2298636, 1: 2298835, 6: 2299097, 11: 2299125, 44116: 2344718, 44120: 2354503, 44122: 2354687, 44129: 2354933}
[2025-11-24 12:22:02] 2025-11-24 17:21:29,103 | INFO     | --------------------------------------------------
[2025-11-24 12:22:02] 2025-11-24 17:21:29,103 | INFO     | 
[2025-11-24 12:22:02] 2025-11-24 17:21:29,103 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-24 12:22:02] 2025-11-24 17:21:29,132 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 12:22:02] 2025-11-24 17:21:29,132 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 12:22:02] 2025-11-24 17:21:29,133 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 12:22:02] 2025-11-24 17:21:29,133 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 12:22:02] 2025-11-24 17:21:29,133 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 12:22:02] 2025-11-24 17:21:29,133 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 12:22:02] 2025-11-24 17:21:29,133 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 12:22:02] 2025-11-24 17:21:29,134 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 12:22:02] 2025-11-24 17:21:29,134 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 12:22:02] 2025-11-24 17:21:29,134 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 12:22:02] 2025-11-24 17:21:29,134 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 12:22:02] 2025-11-24 17:21:29,134 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 12:22:02] 2025-11-24 17:21:29,135 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 12:22:02] 2025-11-24 17:21:29,135 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 12:22:02] 2025-11-24 17:21:29,135 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 12:22:02] 2025-11-24 17:21:29,135 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 12:22:02] 2025-11-24 17:21:29,135 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 12:22:02] 2025-11-24 17:21:29,136 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 12:22:02] 2025-11-24 17:21:29,136 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 12:22:02] 2025-11-24 17:21:29,136 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 12:22:02] 2025-11-24 17:21:29,136 | INFO     | job 6894268419 has completed (purged errors)
[2025-11-24 12:22:02] 2025-11-24 17:21:29,136 | INFO     | overall cleanup function is called
[2025-11-24 12:22:02] 2025-11-24 17:21:30,152 | INFO     | --- collectZombieJob: --- 10, [1755]
[2025-11-24 12:22:02] 2025-11-24 17:21:30,152 | INFO     | zombie collector waiting for pid 1755
[2025-11-24 12:22:02] 2025-11-24 17:21:30,152 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 12:22:02] 2025-11-24 17:21:30,152 | INFO     | collected zombie processes
[2025-11-24 12:22:02] 2025-11-24 17:21:30,153 | INFO     | will attempt to kill all subprocesses of pid=1755
[2025-11-24 12:22:02] 2025-11-24 17:21:30,245 | INFO     | process IDs to be killed: [1755] (in reverse order)
[2025-11-24 12:22:02] 2025-11-24 17:21:30,304 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 12:22:02] 2025-11-24 17:21:30,304 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 12:22:02] 2025-11-24 17:21:30,308 | INFO     | did not find any defunct processes belonging to 1755
[2025-11-24 12:22:02] 2025-11-24 17:21:30,311 | INFO     | did not find any defunct processes belonging to 1755
[2025-11-24 12:22:02] 2025-11-24 17:21:30,313 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 12:22:02] 2025-11-24 17:21:30,313 | INFO     | ready for new job
[2025-11-24 12:22:02] 2025-11-24 17:21:30,314 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 12:22:02] 2025-11-24 17:21:30,317 | INFO     | ***************************************
[2025-11-24 12:22:02] 2025-11-24 17:21:30,317 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 12:22:02] 2025-11-24 17:21:30,317 | INFO     | ***************************************
[2025-11-24 12:22:02] 2025-11-24 17:21:30,317 | INFO     | 
[2025-11-24 12:22:02] 2025-11-24 17:21:30,318 | INFO     | architecture information:
[2025-11-24 12:22:02] 2025-11-24 17:21:30,318 | INFO     | executing command: cat /etc/os-release
[2025-11-24 12:22:02] 2025-11-24 17:21:30,337 | INFO     | cat /etc/os-release:
[2025-11-24 12:22:02] NAME="CentOS Linux"
[2025-11-24 12:22:02] VERSION="7 (Core)"
[2025-11-24 12:22:02] ID="centos"
[2025-11-24 12:22:02] ID_LIKE="rhel fedora"
[2025-11-24 12:22:02] VERSION_ID="7"
[2025-11-24 12:22:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 12:22:02] ANSI_COLOR="0;31"
[2025-11-24 12:22:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 12:22:02] HOME_URL="https://www.centos.org/"
[2025-11-24 12:22:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 12:22:02] 
[2025-11-24 12:22:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 12:22:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 12:22:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 12:22:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 12:22:02] 
[2025-11-24 12:22:02] 2025-11-24 17:21:30,338 | INFO     | ***************************************
[2025-11-24 12:22:02] 2025-11-24 17:21:30,840 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-24 12:22:02] 2025-11-24 17:21:30,860 | INFO     | sufficient remaining disk space (17432576000 B)
[2025-11-24 12:22:02] 2025-11-24 17:21:30,861 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 12:22:02] 2025-11-24 17:21:30,861 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 12:22:02] 2025-11-24 17:21:30,861 | INFO     | update_server=False
[2025-11-24 12:22:02] 2025-11-24 17:21:30,861 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 12:22:02] 2025-11-24 17:21:30,862 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 12:22:02] 2025-11-24 17:21:30,863 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 12:22:02] 2025-11-24 17:21:30,863 | INFO     | aborting loop
[2025-11-24 12:22:02] 2025-11-24 17:21:31,231 | INFO     | all payload control threads have been joined
[2025-11-24 12:22:02] 2025-11-24 17:21:31,824 | INFO     | all data control threads have been joined
[2025-11-24 12:22:02] 2025-11-24 17:21:31,867 | INFO     | [job] retrieve thread has finished
[2025-11-24 12:22:02] 2025-11-24 17:21:31,869 | INFO     | [job] job monitor thread has finished
[2025-11-24 12:22:02] 2025-11-24 17:21:31,956 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 12:22:02] 2025-11-24 17:21:32,035 | INFO     | [payload] failed_post thread has finished
[2025-11-24 12:22:02] 2025-11-24 17:21:32,232 | INFO     | [payload] control thread has finished
[2025-11-24 12:22:02] 2025-11-24 17:21:32,325 | INFO     | all job control threads have been joined
[2025-11-24 12:22:02] 2025-11-24 17:21:32,658 | INFO     | [job] validate thread has finished
[2025-11-24 12:22:02] 2025-11-24 17:21:32,693 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 12:22:02] 2025-11-24 17:21:32,829 | INFO     | [data] control thread has finished
[2025-11-24 12:22:02] 2025-11-24 17:21:32,868 | INFO     | [data] copytool_out thread has finished
[2025-11-24 12:22:02] 2025-11-24 17:21:32,970 | INFO     | [payload] validate_post thread has finished
[2025-11-24 12:22:02] 2025-11-24 17:21:33,085 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 12:22:02] 2025-11-24 17:21:33,161 | INFO     | [data] copytool_in thread has finished
[2025-11-24 12:22:02] 2025-11-24 17:21:33,170 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 12:22:02] 2025-11-24 17:21:33,330 | INFO     | [job] control thread has finished
[2025-11-24 12:22:02] 2025-11-24 17:21:33,670 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 12:22:02] 2025-11-24 17:21:34,675 | INFO     | [job] queue monitor thread has finished
[2025-11-24 12:22:02] 2025-11-24 17:21:35,962 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 12:22:02] 2025-11-24 17:21:41,409 | INFO     | job.realtimelogging is not enabled
[2025-11-24 12:22:02] 2025-11-24 17:21:42,414 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 12:22:02] 2025-11-24 17:21:55,443 | INFO     | [monitor] cgroup control has ended
[2025-11-24 12:22:02] 2025-11-24 17:21:57,165 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140698998273856)>', '<ExcThread(monitor, started 140697885730560)>']
[2025-11-24 12:22:02] 2025-11-24 17:22:01,984 | INFO     | PID=26724 has CPU usage=6.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-24 12:22:02] 2025-11-24 17:22:01,985 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 12:22:02] 2025-11-24 17:22:01,985 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 12:22:02] 2025-11-24 17:22:01,985 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 12:22:02] 2025-11-24 17:22:01,985 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 12:22:02] 2025-11-24 17:22:01,985 | INFO     | [monitor] control thread has ended
[2025-11-24 12:22:02] 2025-11-24 17:22:02,183 | INFO     | all workflow threads have been joined
[2025-11-24 12:22:02] 2025-11-24 17:22:02,183 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 12:22:02] 2025-11-24 17:22:02,183 | INFO     | traces error code: 0
[2025-11-24 12:22:02] 2025-11-24 17:22:02,184 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 12:22:02] 2025-11-24 17:22:02,288 [wrapper] ==== pilot stdout END ====
[2025-11-24 12:22:02] 2025-11-24 17:22:02,293 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 12:22:02] 2025-11-24 17:22:02,298 [wrapper] pilotpid: 26724
[2025-11-24 12:22:02] 2025-11-24 17:22:02,303 [wrapper] Pilot exit status: 0
[2025-11-24 12:22:02] 2025-11-24 17:22:02,320 [wrapper] pandaids: 6894268419
[2025-11-24 12:22:02] 2025-11-24 17:22:02,363 [wrapper] cleanup supervisor_pilot 11836 26725
[2025-11-24 12:22:02] 2025-11-24 17:22:02,369 [wrapper] Test setup, not cleaning
[2025-11-24 12:22:02] 2025-11-24 17:22:02,374 [wrapper] apfmon messages muted
[2025-11-24 12:22:02] 2025-11-24 17:22:02,378 [wrapper] ==== wrapper stdout END ====
[2025-11-24 12:22:02] 2025-11-24 17:22:02,383 [wrapper] ==== wrapper stderr END ====
[2025-11-24 12:22:02]  *** Error codes and diagnostics ***
[2025-11-24 12:22:02]     "exeErrorCode": 0,
[2025-11-24 12:22:02]     "exeErrorDiag": "",
[2025-11-24 12:22:02]     "pilotErrorCode": 0,
[2025-11-24 12:22:02]     "pilotErrorDiag": "",
[2025-11-24 12:22:02]  *** Listing of results directory ***
[2025-11-24 12:22:02] total 1312736
[2025-11-24 12:22:02] -rw-r--r-- 1 boincer umatlas    576529 Nov 21 00:09 pilot3.tar.gz
[2025-11-24 12:22:02] -rwx------ 1 boincer umatlas     36292 Nov 21 00:46 runpilot2-wrapper.sh
[2025-11-24 12:22:02] -rw-r--r-- 1 boincer umatlas      5112 Nov 21 00:46 queuedata.json
[2025-11-24 12:22:02] -rw-r--r-- 1 boincer umatlas       100 Nov 24 00:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 12:22:02] -rwxr-xr-x 1 boincer umatlas      7986 Nov 24 00:05 run_atlas
[2025-11-24 12:22:02] -rw-r--r-- 1 boincer umatlas       105 Nov 24 00:05 job.xml
[2025-11-24 12:22:02] -rw-r--r-- 2 boincer umatlas 411340892 Nov 24 00:05 EVNT.47493127._002264.pool.root.1
[2025-11-24 12:22:02] -rw-r--r-- 2 boincer umatlas     15847 Nov 24 00:05 start_atlas.sh
[2025-11-24 12:22:02] drwxrwx--x 2 boincer umatlas      4096 Nov 24 00:05 shared
[2025-11-24 12:22:02] -rw-r--r-- 2 boincer umatlas    590101 Nov 24 00:05 input.tar.gz
[2025-11-24 12:22:02] -rw-r--r-- 1 boincer umatlas         0 Nov 24 00:05 boinc_lockfile
[2025-11-24 12:22:02] -rw-r--r-- 1 boincer umatlas      2786 Nov 24 00:05 pandaJob.out
[2025-11-24 12:22:02] -rw------- 1 boincer umatlas        57 Nov 24 00:05 setup.sh.local
[2025-11-24 12:22:02] -rw------- 1 boincer umatlas    989786 Nov 24 00:05 agis_schedconf.cvmfs.json
[2025-11-24 12:22:02] drwx------ 5 boincer umatlas      4096 Nov 24 00:05 pilot3
[2025-11-24 12:22:02] -rw-r--r-- 1 boincer umatlas       533 Nov 24 12:10 boinc_task_state.xml
[2025-11-24 12:22:02] -rw-r--r-- 1 boincer umatlas      5912 Nov 24 12:10 init_data.xml
[2025-11-24 12:22:02] -rw------- 1 boincer umatlas 912923322 Nov 24 12:20 HITS.47533967._002353.pool.root.1
[2025-11-24 12:22:02] -rw------- 1 boincer umatlas      1064 Nov 24 12:21 memory_monitor_summary.json
[2025-11-24 12:22:02] -rw------- 1 boincer umatlas   1516227 Nov 24 12:21 agis_ddmendpoints.agis.ALL.json
[2025-11-24 12:22:02] -rw------- 1 boincer umatlas   1975474 Nov 24 12:21 log.47533967._002353.job.log.tgz.1
[2025-11-24 12:22:02] -rw------- 1 boincer umatlas        95 Nov 24 12:21 pilot_heartbeat.json
[2025-11-24 12:22:02] -rw------- 1 boincer umatlas      8670 Nov 24 12:21 heartbeat.json
[2025-11-24 12:22:02] -rw-r--r-- 1 boincer umatlas      8192 Nov 24 12:21 boinc_mmap_file
[2025-11-24 12:22:02] -rw-r--r-- 1 boincer umatlas        29 Nov 24 12:21 wrapper_checkpoint.txt
[2025-11-24 12:22:02] -rw------- 1 boincer umatlas      4818 Nov 24 12:22 pilotlog.txt
[2025-11-24 12:22:02] -rw------- 1 boincer umatlas   6049858 Nov 24 12:22 log.47533967._002353.job.log.1
[2025-11-24 12:22:02] -rw------- 1 boincer umatlas       353 Nov 24 12:22 output.list
[2025-11-24 12:22:02] -rw-r--r-- 1 boincer umatlas       620 Nov 24 12:22 runtime_log
[2025-11-24 12:22:02] -rw------- 1 boincer umatlas   8048640 Nov 24 12:22 result.tar.gz
[2025-11-24 12:22:02] -rw------- 1 boincer umatlas       668 Nov 24 12:22 XY6NDmK9Yg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmc8IKDmpDJVFm.diag
[2025-11-24 12:22:02] -rw-r--r-- 1 boincer umatlas      9343 Nov 24 12:22 runtime_log.err
[2025-11-24 12:22:02] -rw-r--r-- 1 boincer umatlas     21281 Nov 24 12:22 stderr.txt
[2025-11-24 12:22:02] HITS file was successfully produced:
[2025-11-24 12:22:02] -rw------- 1 boincer umatlas 912923322 Nov 24 12:20 shared/HITS.pool.root.1
[2025-11-24 12:22:02]  *** Contents of shared directory: ***
[2025-11-24 12:22:02] total 1301696
[2025-11-24 12:22:02] -rw-r--r-- 2 boincer umatlas 411340892 Nov 24 00:05 ATLAS.root_0
[2025-11-24 12:22:02] -rw-r--r-- 2 boincer umatlas     15847 Nov 24 00:05 start_atlas.sh
[2025-11-24 12:22:02] -rw-r--r-- 2 boincer umatlas    590101 Nov 24 00:05 input.tar.gz
[2025-11-24 12:22:02] -rw------- 1 boincer umatlas 912923322 Nov 24 12:20 HITS.pool.root.1
[2025-11-24 12:22:02] -rw------- 1 boincer umatlas   8048640 Nov 24 12:22 result.tar.gz
12:22:03 (23035): run_atlas exited; CPU time 339690.553381
12:22:03 (23035): called boinc_finish(0)

</stderr_txt>
]]>

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