Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:03:51 (1003582): wrapper (7.7.26015): starting
11:03:51 (1003582): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 11:03:51] Arguments: --nthreads 8
[2025-11-25 11:03:51] Threads: 8
[2025-11-25 11:03:51] Checking for CVMFS
[2025-11-25 11:03:52] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 11:03:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 11:03:52] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 11:03:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 11:03:53] 2.13.2.0 7693 32545 186404 153287 0 343 39235387 39288618 7493 16776704 0 28120456 99.640 25081803 31545 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-25 11:03:53] CVMFS is ok
[2025-11-25 11:03:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 11:03:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 11:03:53] Further information can be found at the LHC@home message board.
[2025-11-25 11:03:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 11:03:53] Checking for apptainer binary...
[2025-11-25 11:03:53] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 11:03:53] Running /usr/bin/apptainer --version
[2025-11-25 11:03:54] apptainer version 1.4.4-1.el9
[2025-11-25 11:03:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 11:03:54] c-210-18.aglt2.org
[2025-11-25 11:03:54] apptainer works
[2025-11-25 11:03:54] Set ATHENA_PROC_NUMBER=8
[2025-11-25 11:03:54] Set ATHENA_CORE_NUMBER=8
[2025-11-25 11:03:54] Starting ATLAS job with PandaID=6895356453
[2025-11-25 11:03:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 02:34:21]  *** The last 200 lines of the pilot log: ***
[2025-11-27 02:34:21] 2025-11-27 07:33:33,116 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6895356453/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 02:34:21] 2025-11-27 07:33:33,117 | INFO     | extracted standard info from prmon json
[2025-11-27 02:34:21] 2025-11-27 07:33:33,117 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 02:34:21] 2025-11-27 07:33:33,117 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 02:34:21] 2025-11-27 07:33:33,238 | INFO     | fitting pss+swap vs Time
[2025-11-27 02:34:21] 2025-11-27 07:33:33,249 | INFO     | sum of square deviations: 3911965818616.448
[2025-11-27 02:34:21] 2025-11-27 07:33:33,777 | INFO     | sum of deviations: 13520161047514.523
[2025-11-27 02:34:21] 2025-11-27 07:33:33,777 | INFO     | mean x: 1764157783.5704467
[2025-11-27 02:34:21] 2025-11-27 07:33:33,777 | INFO     | mean y: 3009983.0365120275
[2025-11-27 02:34:21] 2025-11-27 07:33:33,777 | INFO     | intersect: -6094102939.983449
[2025-11-27 02:34:21] 2025-11-27 07:33:33,797 | INFO     | chi2: 15.54238368378028
[2025-11-27 02:34:21] 2025-11-27 07:33:33,816 | INFO     | sum of square deviations: 3886817811890.0796
[2025-11-27 02:34:21] 2025-11-27 07:33:34,015 | INFO     | time since job start (142129s) is within the limit (172800.0s)
[2025-11-27 02:34:21] 2025-11-27 07:33:34,503 | INFO     | sum of deviations: 14368958738054.188
[2025-11-27 02:34:21] 2025-11-27 07:33:34,510 | INFO     | mean x: 1764157631.0878174
[2025-11-27 02:34:21] 2025-11-27 07:33:34,511 | INFO     | mean y: 3015129.5824365043
[2025-11-27 02:34:21] 2025-11-27 07:33:34,511 | INFO     | intersect: -6518800256.510363
[2025-11-27 02:34:21] 2025-11-27 07:33:34,514 | INFO     | chi2: 12.183335513442167
[2025-11-27 02:34:21] 2025-11-27 07:33:34,530 | INFO     | current chi2=12.183335513442167 (change=21.612181494679923 %)
[2025-11-27 02:34:21] 2025-11-27 07:33:34,530 | INFO     | right removable region: 2322
[2025-11-27 02:34:21] 2025-11-27 07:33:34,534 | INFO     | sum of square deviations: 3886806351210.082
[2025-11-27 02:34:21] 2025-11-27 07:33:35,101 | INFO     | sum of deviations: 12550803434902.355
[2025-11-27 02:34:21] 2025-11-27 07:33:35,113 | INFO     | mean x: 1764157936.0878174
[2025-11-27 02:34:21] 2025-11-27 07:33:35,114 | INFO     | mean y: 3015858.870856651
[2025-11-27 02:34:21] 2025-11-27 07:33:35,114 | INFO     | intersect: -5693588881.179512
[2025-11-27 02:34:21] 2025-11-27 07:33:35,117 | INFO     | chi2: 11.448028576532025
[2025-11-27 02:34:21] 2025-11-27 07:33:35,129 | INFO     | current chi2=11.448028576532025 (change=26.343160679536187 %)
[2025-11-27 02:34:21] 2025-11-27 07:33:35,132 | INFO     | sum of square deviations: 3861754932339.815
[2025-11-27 02:34:21] 2025-11-27 07:33:35,377 | INFO     | monitor loop #8478: job 0:6895356453 is in state 'finished'
[2025-11-27 02:34:21] 2025-11-27 07:33:35,378 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 02:34:21] 2025-11-27 07:33:35,435 | INFO     | sum of deviations: 11701476350944.443
[2025-11-27 02:34:21] 2025-11-27 07:33:35,436 | INFO     | mean x: 1764158088.6052632
[2025-11-27 02:34:21] 2025-11-27 07:33:35,436 | INFO     | mean y: 3021029.9633304575
[2025-11-27 02:34:21] 2025-11-27 07:33:35,440 | INFO     | intersect: -5342541936.828612
[2025-11-27 02:34:21] 2025-11-27 07:33:35,443 | INFO     | chi2: 8.403712673522017
[2025-11-27 02:34:21] 2025-11-27 07:33:35,443 | INFO     | current chi2=8.403712673522017 (change=26.592490424514892 %)
[2025-11-27 02:34:21] 2025-11-27 07:33:35,450 | INFO     | sum of square deviations: 3836811329443.1304
[2025-11-27 02:34:21] 2025-11-27 07:33:35,600 | INFO     | sum of deviations: 11067893204945.79
[2025-11-27 02:34:21] 2025-11-27 07:33:35,600 | INFO     | mean x: 1764158241.1227844
[2025-11-27 02:34:21] 2025-11-27 07:33:35,601 | INFO     | mean y: 3024903.3246865543
[2025-11-27 02:34:21] 2025-11-27 07:33:35,601 | INFO     | intersect: -5085970445.374382
[2025-11-27 02:34:21] 2025-11-27 07:33:35,604 | INFO     | chi2: 6.797897184792027
[2025-11-27 02:34:21] 2025-11-27 07:33:35,604 | INFO     | current chi2=6.797897184792027 (change=19.10840542882327 %)
[2025-11-27 02:34:21] 2025-11-27 07:33:35,604 | INFO     | left removable region: 30
[2025-11-27 02:34:21] 2025-11-27 07:33:35,607 | INFO     | sum of square deviations: 3733250788132.6187
[2025-11-27 02:34:21] 2025-11-27 07:33:35,744 | INFO     | sum of deviations: 11513556360938.432
[2025-11-27 02:34:21] 2025-11-27 07:33:35,744 | INFO     | mean x: 1764158515.645288
[2025-11-27 02:34:21] 2025-11-27 07:33:35,745 | INFO     | mean y: 3034760.6954624783
[2025-11-27 02:34:21] 2025-11-27 07:33:35,745 | INFO     | intersect: -5437729777.298914
[2025-11-27 02:34:21] 2025-11-27 07:33:35,748 | INFO     | chi2: 2.505901453000112
[2025-11-27 02:34:21] 2025-11-27 07:33:35,748 | INFO     | current memory leak: 3.08 B/s (using 2292 data points, chi2=2.51)
[2025-11-27 02:34:21] 2025-11-27 07:33:35,750 | INFO     | could have reported an average CPU frequency of 2599 MHz (80 samples)
[2025-11-27 02:34:21] 2025-11-27 07:33:35,750 | INFO     | ..............................
[2025-11-27 02:34:21] 2025-11-27 07:33:35,751 | INFO     | . Timing measurements:
[2025-11-27 02:34:21] 2025-11-27 07:33:35,751 | INFO     | . get job = 0 s
[2025-11-27 02:34:21] 2025-11-27 07:33:35,752 | INFO     | . initial setup = 4 s
[2025-11-27 02:34:21] 2025-11-27 07:33:35,752 | INFO     | . payload setup = 36 s
[2025-11-27 02:34:21] 2025-11-27 07:33:35,752 | INFO     | . stage-in = 0 s
[2025-11-27 02:34:21] 2025-11-27 07:33:35,752 | INFO     | . payload execution = 142013 s
[2025-11-27 02:34:21] 2025-11-27 07:33:35,752 | INFO     | . stage-out = 5 s
[2025-11-27 02:34:21] 2025-11-27 07:33:35,752 | INFO     | . log creation = 2 s
[2025-11-27 02:34:21] 2025-11-27 07:33:35,752 | INFO     | ..............................
[2025-11-27 02:34:21] 2025-11-27 07:33:36,038 | INFO     | time since job start (142131s) is within the limit (172800.0s)
[2025-11-27 02:34:21] 2025-11-27 07:33:36,199 | INFO     | 
[2025-11-27 02:34:21] 2025-11-27 07:33:36,199 | INFO     | job summary report
[2025-11-27 02:34:21] 2025-11-27 07:33:36,200 | INFO     | --------------------------------------------------
[2025-11-27 02:34:21] 2025-11-27 07:33:36,200 | INFO     | PanDA job id: 6895356453
[2025-11-27 02:34:21] 2025-11-27 07:33:36,200 | INFO     | task id: 47556149
[2025-11-27 02:34:21] 2025-11-27 07:33:36,200 | INFO     | errors: (none)
[2025-11-27 02:34:21] 2025-11-27 07:33:36,200 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 02:34:21] 2025-11-27 07:33:36,200 | INFO     | pilot state: finished 
[2025-11-27 02:34:21] 2025-11-27 07:33:36,200 | INFO     | transexitcode: 0
[2025-11-27 02:34:21] 2025-11-27 07:33:36,200 | INFO     | exeerrorcode: 0
[2025-11-27 02:34:21] 2025-11-27 07:33:36,200 | INFO     | exeerrordiag: 
[2025-11-27 02:34:21] 2025-11-27 07:33:36,200 | INFO     | exitcode: 0
[2025-11-27 02:34:21] 2025-11-27 07:33:36,201 | INFO     | exitmsg: OK
[2025-11-27 02:34:21] 2025-11-27 07:33:36,201 | INFO     | cpuconsumptiontime: 308584 s
[2025-11-27 02:34:21] 2025-11-27 07:33:36,201 | INFO     | nevents: 1000
[2025-11-27 02:34:21] 2025-11-27 07:33:36,201 | INFO     | neventsw: 0
[2025-11-27 02:34:21] 2025-11-27 07:33:36,201 | INFO     | pid: 1019035
[2025-11-27 02:34:21] 2025-11-27 07:33:36,201 | INFO     | pgrp: 1019035
[2025-11-27 02:34:21] 2025-11-27 07:33:36,201 | INFO     | corecount: 8
[2025-11-27 02:34:21] 2025-11-27 07:33:36,201 | INFO     | event service: False
[2025-11-27 02:34:21] 2025-11-27 07:33:36,201 | INFO     | sizes: {0: 2284092, 1: 2284291, 12: 2284291, 23: 2284319, 25: 2284609, 34: 2284637, 142053: 2374823, 142059: 2383817, 142060: 2383873, 142073: 2384119}
[2025-11-27 02:34:21] 2025-11-27 07:33:36,201 | INFO     | --------------------------------------------------
[2025-11-27 02:34:21] 2025-11-27 07:33:36,201 | INFO     | 
[2025-11-27 02:34:21] 2025-11-27 07:33:36,202 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-27 02:34:21] 2025-11-27 07:33:36,266 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 02:34:21] 2025-11-27 07:33:36,280 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 02:34:21] 2025-11-27 07:33:36,281 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 02:34:21] 2025-11-27 07:33:36,281 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 02:34:21] 2025-11-27 07:33:36,281 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 02:34:21] 2025-11-27 07:33:36,281 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 02:34:21] 2025-11-27 07:33:36,281 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 02:34:21] 2025-11-27 07:33:36,281 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 02:34:21] 2025-11-27 07:33:36,281 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 02:34:21] 2025-11-27 07:33:36,281 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 02:34:21] 2025-11-27 07:33:36,282 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 02:34:21] 2025-11-27 07:33:36,282 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 02:34:21] 2025-11-27 07:33:36,282 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 02:34:21] 2025-11-27 07:33:36,282 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 02:34:21] 2025-11-27 07:33:36,282 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 02:34:21] 2025-11-27 07:33:36,282 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 02:34:21] 2025-11-27 07:33:36,282 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 02:34:21] 2025-11-27 07:33:36,282 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 02:34:21] 2025-11-27 07:33:36,282 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 02:34:21] 2025-11-27 07:33:36,283 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 02:34:21] 2025-11-27 07:33:36,283 | INFO     | job 6895356453 has completed (purged errors)
[2025-11-27 02:34:21] 2025-11-27 07:33:36,283 | INFO     | overall cleanup function is called
[2025-11-27 02:34:21] 2025-11-27 07:33:37,312 | INFO     | --- collectZombieJob: --- 10, [1019035]
[2025-11-27 02:34:21] 2025-11-27 07:33:37,312 | INFO     | zombie collector waiting for pid 1019035
[2025-11-27 02:34:21] 2025-11-27 07:33:37,313 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 02:34:21] 2025-11-27 07:33:37,313 | INFO     | collected zombie processes
[2025-11-27 02:34:21] 2025-11-27 07:33:37,313 | INFO     | will attempt to kill all subprocesses of pid=1019035
[2025-11-27 02:34:21] 2025-11-27 07:33:37,884 | INFO     | PID=1007608 has CPU usage=18.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-11-27 02:34:21] 2025-11-27 07:33:37,901 | INFO     | .. there are 8 such processes running
[2025-11-27 02:34:21] 2025-11-27 07:33:38,103 | INFO     | process IDs to be killed: [1019035] (in reverse order)
[2025-11-27 02:34:21] 2025-11-27 07:33:38,237 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 02:34:21] 2025-11-27 07:33:38,238 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 02:34:21] 2025-11-27 07:33:38,247 | INFO     | did not find any defunct processes belonging to 1019035
[2025-11-27 02:34:21] 2025-11-27 07:33:38,256 | INFO     | did not find any defunct processes belonging to 1019035
[2025-11-27 02:34:21] 2025-11-27 07:33:38,262 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 02:34:21] 2025-11-27 07:33:38,263 | INFO     | ready for new job
[2025-11-27 02:34:21] 2025-11-27 07:33:38,263 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 02:34:21] 2025-11-27 07:33:38,282 | INFO     | ***************************************
[2025-11-27 02:34:21] 2025-11-27 07:33:38,282 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 02:34:21] 2025-11-27 07:33:38,282 | INFO     | ***************************************
[2025-11-27 02:34:21] 2025-11-27 07:33:38,282 | INFO     | 
[2025-11-27 02:34:21] 2025-11-27 07:33:38,284 | INFO     | architecture information:
[2025-11-27 02:34:21] 2025-11-27 07:33:38,289 | INFO     | executing command: cat /etc/os-release
[2025-11-27 02:34:21] 2025-11-27 07:33:38,310 | INFO     | cat /etc/os-release:
[2025-11-27 02:34:21] NAME="CentOS Linux"
[2025-11-27 02:34:21] VERSION="7 (Core)"
[2025-11-27 02:34:21] ID="centos"
[2025-11-27 02:34:21] ID_LIKE="rhel fedora"
[2025-11-27 02:34:21] VERSION_ID="7"
[2025-11-27 02:34:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 02:34:21] ANSI_COLOR="0;31"
[2025-11-27 02:34:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 02:34:21] HOME_URL="https://www.centos.org/"
[2025-11-27 02:34:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 02:34:21] 
[2025-11-27 02:34:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 02:34:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 02:34:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 02:34:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 02:34:21] 
[2025-11-27 02:34:21] 2025-11-27 07:33:38,310 | INFO     | ***************************************
[2025-11-27 02:34:21] 2025-11-27 07:33:38,814 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-27 02:34:21] 2025-11-27 07:33:38,859 | INFO     | sufficient remaining disk space (50854887424 B)
[2025-11-27 02:34:21] 2025-11-27 07:33:38,859 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 02:34:21] 2025-11-27 07:33:38,859 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 02:34:21] 2025-11-27 07:33:38,859 | INFO     | update_server=False
[2025-11-27 02:34:21] 2025-11-27 07:33:38,860 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 02:34:21] 2025-11-27 07:33:38,860 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-27 02:34:21] 2025-11-27 07:33:38,860 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 02:34:21] 2025-11-27 07:33:38,860 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 02:34:21] 2025-11-27 07:33:38,860 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 02:34:21] 2025-11-27 07:33:38,861 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 02:34:21] 2025-11-27 07:33:38,861 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 02:34:21] 2025-11-27 07:33:38,923 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 02:34:21] 2025-11-27 07:33:38,924 | INFO     | aborting loop
[2025-11-27 02:34:21] 2025-11-27 07:33:39,279 | INFO     | all job control threads have been joined
[2025-11-27 02:34:21] 2025-11-27 07:33:39,347 | INFO     | all data control threads have been joined
[2025-11-27 02:34:21] 2025-11-27 07:33:39,414 | INFO     | all payload control threads have been joined
[2025-11-27 02:34:21] 2025-11-27 07:33:39,865 | INFO     | [job] retrieve thread has finished
[2025-11-27 02:34:21] 2025-11-27 07:33:39,929 | INFO     | [job] job monitor thread has finished
[2025-11-27 02:34:21] 2025-11-27 07:33:40,265 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 02:34:21] 2025-11-27 07:33:40,285 | INFO     | [job] control thread has finished
[2025-11-27 02:34:21] 2025-11-27 07:33:40,320 | INFO     | [payload] validate_post thread has finished
[2025-11-27 02:34:21] 2025-11-27 07:33:40,353 | INFO     | [data] control thread has finished
[2025-11-27 02:34:21] 2025-11-27 07:33:40,421 | INFO     | [payload] control thread has finished
[2025-11-27 02:34:21] 2025-11-27 07:33:40,437 | INFO     | [payload] failed_post thread has finished
[2025-11-27 02:34:21] 2025-11-27 07:33:40,451 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 02:34:21] 2025-11-27 07:33:40,867 | INFO     | [data] copytool_out thread has finished
[2025-11-27 02:34:21] 2025-11-27 07:33:40,893 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 02:34:21] 2025-11-27 07:33:40,905 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 02:34:21] 2025-11-27 07:33:40,918 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 02:34:21] 2025-11-27 07:33:41,228 | INFO     | [job] validate thread has finished
[2025-11-27 02:34:21] 2025-11-27 07:33:41,238 | INFO     | [data] copytool_in thread has finished
[2025-11-27 02:34:21] 2025-11-27 07:33:41,899 | INFO     | [job] queue monitor thread has finished
[2025-11-27 02:34:21] 2025-11-27 07:33:42,869 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 02:34:21] 2025-11-27 07:34:15,574 | INFO     | [monitor] cgroup control has ended
[2025-11-27 02:34:21] 2025-11-27 07:34:16,032 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140373522626368)>', '<ExcThread(monitor, started 140372802000640)>']
[2025-11-27 02:34:21] 2025-11-27 07:34:16,085 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 02:34:21] 2025-11-27 07:34:16,085 | INFO     | [monitor] control thread has ended
[2025-11-27 02:34:21] 2025-11-27 07:34:21,058 | INFO     | all workflow threads have been joined
[2025-11-27 02:34:21] 2025-11-27 07:34:21,060 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 02:34:21] 2025-11-27 07:34:21,060 | INFO     | traces error code: 0
[2025-11-27 02:34:21] 2025-11-27 07:34:21,060 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 02:34:21] 2025-11-27 07:34:21,499 [wrapper] ==== pilot stdout END ====
[2025-11-27 02:34:21] 2025-11-27 07:34:21,502 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 02:34:21] 2025-11-27 07:34:21,505 [wrapper] pilotpid: 1007608
[2025-11-27 02:34:21] 2025-11-27 07:34:21,509 [wrapper] Pilot exit status: 0
[2025-11-27 02:34:21] 2025-11-27 07:34:21,529 [wrapper] pandaids: 6895356453
[2025-11-27 02:34:21] 2025-11-27 07:34:21,579 [wrapper] cleanup supervisor_pilot  481830 1007609
[2025-11-27 02:34:21] 2025-11-27 07:34:21,583 [wrapper] Test setup, not cleaning
[2025-11-27 02:34:21] 2025-11-27 07:34:21,586 [wrapper] apfmon messages muted
[2025-11-27 02:34:21] 2025-11-27 07:34:21,590 [wrapper] ==== wrapper stdout END ====
[2025-11-27 02:34:21] 2025-11-27 07:34:21,594 [wrapper] ==== wrapper stderr END ====
[2025-11-27 02:34:21]  *** Error codes and diagnostics ***
[2025-11-27 02:34:21]     "exeErrorCode": 0,
[2025-11-27 02:34:21]     "exeErrorDiag": "",
[2025-11-27 02:34:21]     "pilotErrorCode": 0,
[2025-11-27 02:34:21]     "pilotErrorDiag": "",
[2025-11-27 02:34:21]  *** Listing of results directory ***
[2025-11-27 02:34:21] total 1349952
[2025-11-27 02:34:21] -rw-r--r--. 1 boincer umatlas    576529 Nov 23 06:12 pilot3.tar.gz
[2025-11-27 02:34:21] -rw-r--r--. 1 boincer umatlas      5112 Nov 23 06:18 queuedata.json
[2025-11-27 02:34:21] -rwx------. 1 boincer umatlas     36292 Nov 23 06:18 runpilot2-wrapper.sh
[2025-11-27 02:34:21] -rw-r--r--. 1 boincer umatlas       100 Nov 25 11:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 02:34:21] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 11:03 run_atlas
[2025-11-27 02:34:21] -rw-r--r--. 1 boincer umatlas       105 Nov 25 11:03 job.xml
[2025-11-27 02:34:21] -rw-r--r--. 2 boincer umatlas 407717336 Nov 25 11:03 EVNT.47483658._001155.pool.root.1
[2025-11-27 02:34:21] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 11:03 start_atlas.sh
[2025-11-27 02:34:21] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 11:03 shared
[2025-11-27 02:34:21] -rw-r--r--. 2 boincer umatlas    590099 Nov 25 11:03 input.tar.gz
[2025-11-27 02:34:21] -rw-r--r--. 1 boincer umatlas         0 Nov 25 11:03 boinc_lockfile
[2025-11-27 02:34:21] -rw-r--r--. 1 boincer umatlas      2784 Nov 25 11:03 pandaJob.out
[2025-11-27 02:34:21] -rw-------. 1 boincer umatlas        57 Nov 25 11:03 setup.sh.local
[2025-11-27 02:34:21] -rw-------. 1 boincer umatlas    991909 Nov 25 11:04 agis_schedconf.cvmfs.json
[2025-11-27 02:34:21] drwx------. 5 boincer umatlas      4096 Nov 25 11:04 pilot3
[2025-11-27 02:34:21] -rw-r--r--. 1 boincer umatlas       533 Nov 27 02:10 boinc_task_state.xml
[2025-11-27 02:34:21] -rw-r--r--. 1 boincer umatlas      6661 Nov 27 02:28 init_data.xml
[2025-11-27 02:34:21] -rw-------. 1 boincer umatlas 928767752 Nov 27 02:32 HITS.47556149._001415.pool.root.1
[2025-11-27 02:34:21] -rw-------. 1 boincer umatlas      1060 Nov 27 02:33 memory_monitor_summary.json
[2025-11-27 02:34:21] -rw-------. 1 boincer umatlas   1516240 Nov 27 02:33 agis_ddmendpoints.agis.ALL.json
[2025-11-27 02:34:21] -rw-------. 1 boincer umatlas   3095430 Nov 27 02:33 log.47556149._001415.job.log.tgz.1
[2025-11-27 02:34:21] -rw-------. 1 boincer umatlas        95 Nov 27 02:33 pilot_heartbeat.json
[2025-11-27 02:34:21] -rw-------. 1 boincer umatlas      8622 Nov 27 02:33 heartbeat.json
[2025-11-27 02:34:21] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 02:34 boinc_mmap_file
[2025-11-27 02:34:21] -rw-r--r--. 1 boincer umatlas        29 Nov 27 02:34 wrapper_checkpoint.txt
[2025-11-27 02:34:21] -rw-------. 1 boincer umatlas      4552 Nov 27 02:34 pilotlog.txt
[2025-11-27 02:34:21] -rw-------. 1 boincer umatlas  17881731 Nov 27 02:34 log.47556149._001415.job.log.1
[2025-11-27 02:34:21] -rw-------. 1 boincer umatlas       353 Nov 27 02:34 output.list
[2025-11-27 02:34:21] -rw-r--r--. 1 boincer umatlas       620 Nov 27 02:34 runtime_log
[2025-11-27 02:34:21] -rw-------. 1 boincer umatlas  20992000 Nov 27 02:34 result.tar.gz
[2025-11-27 02:34:21] -rw-------. 1 boincer umatlas       663 Nov 27 02:34 TiJMDm0HNh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmYpKKDmrWHWIo.diag
[2025-11-27 02:34:21] -rw-r--r--. 1 boincer umatlas      9344 Nov 27 02:34 runtime_log.err
[2025-11-27 02:34:21] -rw-r--r--. 1 boincer umatlas     21410 Nov 27 02:34 stderr.txt
[2025-11-27 02:34:21] HITS file was successfully produced:
[2025-11-27 02:34:21] -rw-------. 1 boincer umatlas 928767752 Nov 27 02:32 shared/HITS.pool.root.1
[2025-11-27 02:34:21]  *** Contents of shared directory: ***
[2025-11-27 02:34:21] total 1326264
[2025-11-27 02:34:21] -rw-r--r--. 2 boincer umatlas 407717336 Nov 25 11:03 ATLAS.root_0
[2025-11-27 02:34:21] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 11:03 start_atlas.sh
[2025-11-27 02:34:21] -rw-r--r--. 2 boincer umatlas    590099 Nov 25 11:03 input.tar.gz
[2025-11-27 02:34:21] -rw-------. 1 boincer umatlas 928767752 Nov 27 02:32 HITS.pool.root.1
[2025-11-27 02:34:21] -rw-------. 1 boincer umatlas  20992000 Nov 27 02:34 result.tar.gz
02:34:23 (1003582): run_atlas exited; CPU time 310919.760225
02:34:23 (1003582): called boinc_finish(0)

</stderr_txt>
]]>

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