Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
15:55:30 (1406046): wrapper (7.7.26015): starting
15:55:30 (1406046): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 15:55:30] Arguments: --nthreads 8
[2025-11-25 15:55:30] Threads: 8
[2025-11-25 15:55:30] Checking for CVMFS
[2025-11-25 15:55:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 15:55:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 15:55:32] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 15:55:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 15:55:33] 2.13.3.0 11048 29117 387976 153297 0 64 26721591 32935936 28368 16776704 0 79869636 99.425 117038828 37732 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 15:55:33] CVMFS is ok
[2025-11-25 15:55:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 15:55:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 15:55:33] Further information can be found at the LHC@home message board.
[2025-11-25 15:55:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 15:55:33] Checking for apptainer binary...
[2025-11-25 15:55:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 15:55:33] Running /usr/bin/apptainer --version
[2025-11-25 15:55:33] apptainer version 1.4.4-1.el9
[2025-11-25 15:55:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 15:55:33] c6-1-24-2.aglt2.org
[2025-11-25 15:55:33] apptainer works
[2025-11-25 15:55:34] Set ATHENA_PROC_NUMBER=8
[2025-11-25 15:55:34] Set ATHENA_CORE_NUMBER=8
[2025-11-25 15:55:34] Starting ATLAS job with PandaID=6895356205
[2025-11-25 15:55:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 07:40:17]  *** The last 200 lines of the pilot log: ***
[2025-11-26 07:40:17] 2025-11-26 12:39:20,085 | INFO     | time since job start (56570s) is within the limit (172800.0s)
[2025-11-26 07:40:17] 2025-11-26 12:39:20,870 | INFO     | monitor loop #3476: job 0:6895356205 is in state 'finished'
[2025-11-26 07:40:17] 2025-11-26 12:39:20,870 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 07:40:17] 2025-11-26 12:39:21,253 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-26 07:40:17] 2025-11-26 12:39:21,257 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2968.009839285715
[2025-11-26 07:40:17] 2025-11-26 12:39:21,270 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6895356205/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 07:40:17] 2025-11-26 12:39:21,270 | INFO     | extracted standard info from prmon json
[2025-11-26 07:40:17] 2025-11-26 12:39:21,270 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 07:40:17] 2025-11-26 12:39:21,270 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 07:40:17] 2025-11-26 12:39:21,281 | INFO     | fitting pss+swap vs Time
[2025-11-26 07:40:17] 2025-11-26 12:39:21,282 | INFO     | sum of square deviations: 245416550487.31244
[2025-11-26 07:40:17] 2025-11-26 12:39:21,295 | INFO     | sum of deviations: 1968006359525.383
[2025-11-26 07:40:17] 2025-11-26 12:39:21,295 | INFO     | mean x: 1764132506.2497296
[2025-11-26 07:40:17] 2025-11-26 12:39:21,295 | INFO     | mean y: 2899732.543783784
[2025-11-26 07:40:17] 2025-11-26 12:39:21,295 | INFO     | intersect: -14143758202.510223
[2025-11-26 07:40:17] 2025-11-26 12:39:21,296 | INFO     | chi2: 7.003622151351319
[2025-11-26 07:40:17] 2025-11-26 12:39:21,297 | INFO     | sum of square deviations: 241458652099.46115
[2025-11-26 07:40:17] 2025-11-26 12:39:21,309 | INFO     | sum of deviations: 2237495606931.425
[2025-11-26 07:40:17] 2025-11-26 12:39:21,309 | INFO     | mean x: 1764132353.7565217
[2025-11-26 07:40:17] 2025-11-26 12:39:21,309 | INFO     | mean y: 2910111.9706521737
[2025-11-26 07:40:17] 2025-11-26 12:39:21,309 | INFO     | intersect: -16344561213.885475
[2025-11-26 07:40:17] 2025-11-26 12:39:21,310 | INFO     | chi2: 4.574898097540306
[2025-11-26 07:40:17] 2025-11-26 12:39:21,310 | INFO     | current chi2=4.574898097540306 (change=34.678113714949646 %)
[2025-11-26 07:40:17] 2025-11-26 12:39:21,311 | INFO     | sum of square deviations: 237543545211.52377
[2025-11-26 07:40:17] 2025-11-26 12:39:21,350 | INFO     | sum of deviations: 2276838155996.222
[2025-11-26 07:40:17] 2025-11-26 12:39:21,350 | INFO     | mean x: 1764132201.263388
[2025-11-26 07:40:17] 2025-11-26 12:39:21,350 | INFO     | mean y: 2911636.430601093
[2025-11-26 07:40:17] 2025-11-26 12:39:21,350 | INFO     | intersect: -16906171304.473623
[2025-11-26 07:40:17] 2025-11-26 12:39:21,352 | INFO     | chi2: 4.319661957315457
[2025-11-26 07:40:17] 2025-11-26 12:39:21,352 | INFO     | current chi2=4.319661957315457 (change=5.579056293342935 %)
[2025-11-26 07:40:17] 2025-11-26 12:39:21,352 | INFO     | right removable region: 914
[2025-11-26 07:40:17] 2025-11-26 12:39:21,379 | INFO     | sum of square deviations: 241457946939.46085
[2025-11-26 07:40:17] 2025-11-26 12:39:21,398 | INFO     | sum of deviations: 1619997952325.66
[2025-11-26 07:40:17] 2025-11-26 12:39:21,399 | INFO     | mean x: 1764132658.7565217
[2025-11-26 07:40:17] 2025-11-26 12:39:21,399 | INFO     | mean y: 2913134.9315217393
[2025-11-26 07:40:17] 2025-11-26 12:39:21,399 | INFO     | intersect: -11833066301.822851
[2025-11-26 07:40:17] 2025-11-26 12:39:21,400 | INFO     | chi2: 3.3900256254231667
[2025-11-26 07:40:17] 2025-11-26 12:39:21,402 | INFO     | current chi2=3.3900256254231667 (change=51.596109096646856 %)
[2025-11-26 07:40:17] 2025-11-26 12:39:21,403 | INFO     | sum of square deviations: 237542414763.13058
[2025-11-26 07:40:17] 2025-11-26 12:39:21,423 | INFO     | sum of deviations: 1492341708724.5923
[2025-11-26 07:40:17] 2025-11-26 12:39:21,423 | INFO     | mean x: 1764132811.2579236
[2025-11-26 07:40:17] 2025-11-26 12:39:21,423 | INFO     | mean y: 2918099.0907103824
[2025-11-26 07:40:17] 2025-11-26 12:39:21,423 | INFO     | intersect: -11080108806.209543
[2025-11-26 07:40:17] 2025-11-26 12:39:21,424 | INFO     | chi2: 2.8726757392154916
[2025-11-26 07:40:17] 2025-11-26 12:39:21,425 | INFO     | current chi2=2.8726757392154916 (change=15.26094323086705 %)
[2025-11-26 07:40:17] 2025-11-26 12:39:21,425 | INFO     | left removable region: 20
[2025-11-26 07:40:17] 2025-11-26 12:39:21,426 | INFO     | sum of square deviations: 221560087506.7035
[2025-11-26 07:40:17] 2025-11-26 12:39:21,443 | INFO     | sum of deviations: 1695245742262.022
[2025-11-26 07:40:17] 2025-11-26 12:39:21,443 | INFO     | mean x: 1764132780.777405
[2025-11-26 07:40:17] 2025-11-26 12:39:21,444 | INFO     | mean y: 2934240.0604026844
[2025-11-26 07:40:17] 2025-11-26 12:39:21,444 | INFO     | intersect: -13495158395.000832
[2025-11-26 07:40:17] 2025-11-26 12:39:21,445 | INFO     | chi2: 0.11595853580522139
[2025-11-26 07:40:17] 2025-11-26 12:39:21,445 | INFO     | current memory leak: 7.65 B/s (using 894 data points, chi2=0.12)
[2025-11-26 07:40:17] 2025-11-26 12:39:21,446 | INFO     | could have reported an average CPU frequency of 2959 MHz (34 samples)
[2025-11-26 07:40:17] 2025-11-26 12:39:21,447 | INFO     | ..............................
[2025-11-26 07:40:17] 2025-11-26 12:39:21,447 | INFO     | . Timing measurements:
[2025-11-26 07:40:17] 2025-11-26 12:39:21,447 | INFO     | . get job = 0 s
[2025-11-26 07:40:17] 2025-11-26 12:39:21,447 | INFO     | . initial setup = 4 s
[2025-11-26 07:40:17] 2025-11-26 12:39:21,447 | INFO     | . payload setup = 38 s
[2025-11-26 07:40:17] 2025-11-26 12:39:21,447 | INFO     | . stage-in = 0 s
[2025-11-26 07:40:17] 2025-11-26 12:39:21,447 | INFO     | . payload execution = 56453 s
[2025-11-26 07:40:17] 2025-11-26 12:39:21,447 | INFO     | . stage-out = 3 s
[2025-11-26 07:40:17] 2025-11-26 12:39:21,447 | INFO     | . log creation = 0 s
[2025-11-26 07:40:17] 2025-11-26 12:39:21,448 | INFO     | ..............................
[2025-11-26 07:40:17] 2025-11-26 12:39:21,541 | INFO     | 
[2025-11-26 07:40:17] 2025-11-26 12:39:21,542 | INFO     | job summary report
[2025-11-26 07:40:17] 2025-11-26 12:39:21,542 | INFO     | --------------------------------------------------
[2025-11-26 07:40:17] 2025-11-26 12:39:21,542 | INFO     | PanDA job id: 6895356205
[2025-11-26 07:40:17] 2025-11-26 12:39:21,542 | INFO     | task id: 47556137
[2025-11-26 07:40:17] 2025-11-26 12:39:21,542 | INFO     | errors: (none)
[2025-11-26 07:40:17] 2025-11-26 12:39:21,542 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 07:40:17] 2025-11-26 12:39:21,542 | INFO     | pilot state: finished 
[2025-11-26 07:40:17] 2025-11-26 12:39:21,542 | INFO     | transexitcode: 0
[2025-11-26 07:40:17] 2025-11-26 12:39:21,542 | INFO     | exeerrorcode: 0
[2025-11-26 07:40:17] 2025-11-26 12:39:21,542 | INFO     | exeerrordiag: 
[2025-11-26 07:40:17] 2025-11-26 12:39:21,542 | INFO     | exitcode: 0
[2025-11-26 07:40:17] 2025-11-26 12:39:21,542 | INFO     | exitmsg: OK
[2025-11-26 07:40:17] 2025-11-26 12:39:21,542 | INFO     | cpuconsumptiontime: 233275 s
[2025-11-26 07:40:17] 2025-11-26 12:39:21,542 | INFO     | nevents: 1000
[2025-11-26 07:40:17] 2025-11-26 12:39:21,543 | INFO     | neventsw: 0
[2025-11-26 07:40:17] 2025-11-26 12:39:21,543 | INFO     | pid: 1420725
[2025-11-26 07:40:17] 2025-11-26 12:39:21,543 | INFO     | pgrp: 1420725
[2025-11-26 07:40:17] 2025-11-26 12:39:21,543 | INFO     | corecount: 8
[2025-11-26 07:40:17] 2025-11-26 12:39:21,543 | INFO     | event service: False
[2025-11-26 07:40:17] 2025-11-26 12:39:21,543 | INFO     | sizes: {0: 2284093, 1: 2284292, 2: 2284320, 13: 2284320, 23: 2284376, 26: 2284666, 34: 2284822, 56495: 2336157, 56496: 2336156, 56500: 2345262, 56507: 2345452}
[2025-11-26 07:40:17] 2025-11-26 12:39:21,543 | INFO     | --------------------------------------------------
[2025-11-26 07:40:17] 2025-11-26 12:39:21,543 | INFO     | 
[2025-11-26 07:40:17] 2025-11-26 12:39:21,543 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-11-26 07:40:17] 2025-11-26 12:39:21,569 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 07:40:17] 2025-11-26 12:39:21,569 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 07:40:17] 2025-11-26 12:39:21,570 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 07:40:17] 2025-11-26 12:39:21,570 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 07:40:17] 2025-11-26 12:39:21,570 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 07:40:17] 2025-11-26 12:39:21,570 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 07:40:17] 2025-11-26 12:39:21,570 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 07:40:17] 2025-11-26 12:39:21,570 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 07:40:17] 2025-11-26 12:39:21,570 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 07:40:17] 2025-11-26 12:39:21,570 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 07:40:17] 2025-11-26 12:39:21,570 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 07:40:17] 2025-11-26 12:39:21,570 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 07:40:17] 2025-11-26 12:39:21,570 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 07:40:17] 2025-11-26 12:39:21,570 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 07:40:17] 2025-11-26 12:39:21,570 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 07:40:17] 2025-11-26 12:39:21,570 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 07:40:17] 2025-11-26 12:39:21,571 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 07:40:17] 2025-11-26 12:39:21,571 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 07:40:17] 2025-11-26 12:39:21,571 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 07:40:17] 2025-11-26 12:39:21,571 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 07:40:17] 2025-11-26 12:39:21,571 | INFO     | job 6895356205 has completed (purged errors)
[2025-11-26 07:40:17] 2025-11-26 12:39:21,571 | INFO     | overall cleanup function is called
[2025-11-26 07:40:17] 2025-11-26 12:39:22,588 | INFO     | --- collectZombieJob: --- 10, [1420725]
[2025-11-26 07:40:17] 2025-11-26 12:39:22,588 | INFO     | zombie collector waiting for pid 1420725
[2025-11-26 07:40:17] 2025-11-26 12:39:22,588 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 07:40:17] 2025-11-26 12:39:22,589 | INFO     | collected zombie processes
[2025-11-26 07:40:17] 2025-11-26 12:39:22,594 | INFO     | will attempt to kill all subprocesses of pid=1420725
[2025-11-26 07:40:17] 2025-11-26 12:39:23,052 | INFO     | process IDs to be killed: [1420725] (in reverse order)
[2025-11-26 07:40:17] 2025-11-26 12:39:23,200 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 07:40:17] 2025-11-26 12:39:23,200 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 07:40:17] 2025-11-26 12:39:23,216 | INFO     | did not find any defunct processes belonging to 1420725
[2025-11-26 07:40:17] 2025-11-26 12:39:23,261 | INFO     | did not find any defunct processes belonging to 1420725
[2025-11-26 07:40:17] 2025-11-26 12:39:23,263 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 07:40:17] 2025-11-26 12:39:23,264 | INFO     | ready for new job
[2025-11-26 07:40:17] 2025-11-26 12:39:23,264 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 07:40:17] 2025-11-26 12:39:23,270 | INFO     | ***************************************
[2025-11-26 07:40:17] 2025-11-26 12:39:23,270 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 07:40:17] 2025-11-26 12:39:23,270 | INFO     | ***************************************
[2025-11-26 07:40:17] 2025-11-26 12:39:23,271 | INFO     | 
[2025-11-26 07:40:17] 2025-11-26 12:39:23,274 | INFO     | architecture information:
[2025-11-26 07:40:17] 2025-11-26 12:39:23,275 | INFO     | executing command: cat /etc/os-release
[2025-11-26 07:40:17] 2025-11-26 12:39:23,298 | INFO     | cat /etc/os-release:
[2025-11-26 07:40:17] NAME="CentOS Linux"
[2025-11-26 07:40:17] VERSION="7 (Core)"
[2025-11-26 07:40:17] ID="centos"
[2025-11-26 07:40:17] ID_LIKE="rhel fedora"
[2025-11-26 07:40:17] VERSION_ID="7"
[2025-11-26 07:40:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 07:40:17] ANSI_COLOR="0;31"
[2025-11-26 07:40:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 07:40:17] HOME_URL="https://www.centos.org/"
[2025-11-26 07:40:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 07:40:17] 
[2025-11-26 07:40:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 07:40:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 07:40:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 07:40:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 07:40:17] 
[2025-11-26 07:40:17] 2025-11-26 12:39:23,298 | INFO     | ***************************************
[2025-11-26 07:40:17] 2025-11-26 12:39:23,800 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-11-26 07:40:17] 2025-11-26 12:39:23,822 | INFO     | sufficient remaining disk space (72919023616 B)
[2025-11-26 07:40:17] 2025-11-26 12:39:23,823 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 07:40:17] 2025-11-26 12:39:23,823 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 07:40:17] 2025-11-26 12:39:23,823 | INFO     | update_server=False
[2025-11-26 07:40:17] 2025-11-26 12:39:23,823 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 07:40:17] 2025-11-26 12:39:23,935 | INFO     | all data control threads have been joined
[2025-11-26 07:40:17] 2025-11-26 12:39:24,387 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 07:40:17] 2025-11-26 12:39:24,388 | INFO     | aborting loop
[2025-11-26 07:40:17] 2025-11-26 12:39:24,511 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 07:40:17] 2025-11-26 12:39:24,589 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 07:40:17] 2025-11-26 12:39:24,747 | INFO     | all payload control threads have been joined
[2025-11-26 07:40:17] 2025-11-26 12:39:24,829 | INFO     | [job] retrieve thread has finished
[2025-11-26 07:40:17] 2025-11-26 12:39:24,941 | INFO     | [data] control thread has finished
[2025-11-26 07:40:17] 2025-11-26 12:39:25,093 | INFO     | all job control threads have been joined
[2025-11-26 07:40:17] 2025-11-26 12:39:25,096 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 07:40:17] 2025-11-26 12:39:25,128 | INFO     | [payload] validate_post thread has finished
[2025-11-26 07:40:17] 2025-11-26 12:39:25,133 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 07:40:17] 2025-11-26 12:39:25,186 | INFO     | [payload] failed_post thread has finished
[2025-11-26 07:40:17] 2025-11-26 12:39:25,364 | INFO     | [data] copytool_in thread has finished
[2025-11-26 07:40:17] 2025-11-26 12:39:25,393 | INFO     | [job] job monitor thread has finished
[2025-11-26 07:40:17] 2025-11-26 12:39:25,410 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 07:40:17] 2025-11-26 12:39:25,649 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 07:40:17] 2025-11-26 12:39:25,753 | INFO     | [payload] control thread has finished
[2025-11-26 07:40:17] 2025-11-26 12:39:26,014 | INFO     | [job] validate thread has finished
[2025-11-26 07:40:17] 2025-11-26 12:39:26,098 | INFO     | [job] control thread has finished
[2025-11-26 07:40:17] 2025-11-26 12:39:26,522 | INFO     | [data] copytool_out thread has finished
[2025-11-26 07:40:17] 2025-11-26 12:39:26,557 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 07:40:17] 2025-11-26 12:39:27,562 | INFO     | [job] queue monitor thread has finished
[2025-11-26 07:40:17] 2025-11-26 12:39:28,597 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 07:40:17] 2025-11-26 12:39:53,699 | INFO     | PID=1412492 has CPU usage=8.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 07:40:17] 2025-11-26 12:39:53,699 | INFO     | .. there are 38 such processes running
[2025-11-26 07:40:17] 2025-11-26 12:39:53,700 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 07:40:17] 2025-11-26 12:39:53,700 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 07:40:17] 2025-11-26 12:39:53,700 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 07:40:17] 2025-11-26 12:40:11,565 | INFO     | [monitor] cgroup control has ended
[2025-11-26 07:40:17] 2025-11-26 12:40:11,757 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140710649792320)>', '<ExcThread(monitor, started 140710141474560)>']
[2025-11-26 07:40:17] 2025-11-26 12:40:11,829 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 07:40:17] 2025-11-26 12:40:11,829 | INFO     | [monitor] control thread has ended
[2025-11-26 07:40:17] 2025-11-26 12:40:16,782 | INFO     | all workflow threads have been joined
[2025-11-26 07:40:17] 2025-11-26 12:40:16,783 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 07:40:17] 2025-11-26 12:40:16,783 | INFO     | traces error code: 0
[2025-11-26 07:40:17] 2025-11-26 12:40:16,783 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 07:40:17] 2025-11-26 12:40:16,950 [wrapper] ==== pilot stdout END ====
[2025-11-26 07:40:17] 2025-11-26 12:40:16,956 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 07:40:17] 2025-11-26 12:40:16,972 [wrapper] pilotpid: 1412492
[2025-11-26 07:40:17] 2025-11-26 12:40:16,977 [wrapper] Pilot exit status: 0
[2025-11-26 07:40:17] 2025-11-26 12:40:16,991 [wrapper] pandaids: 6895356205
[2025-11-26 07:40:17] 2025-11-26 12:40:17,091 [wrapper] cleanup supervisor_pilot  165747 1412493
[2025-11-26 07:40:17] 2025-11-26 12:40:17,097 [wrapper] Test setup, not cleaning
[2025-11-26 07:40:17] 2025-11-26 12:40:17,101 [wrapper] apfmon messages muted
[2025-11-26 07:40:17] 2025-11-26 12:40:17,105 [wrapper] ==== wrapper stdout END ====
[2025-11-26 07:40:17] 2025-11-26 12:40:17,109 [wrapper] ==== wrapper stderr END ====
[2025-11-26 07:40:17]  *** Error codes and diagnostics ***
[2025-11-26 07:40:17]     "exeErrorCode": 0,
[2025-11-26 07:40:17]     "exeErrorDiag": "",
[2025-11-26 07:40:17]     "pilotErrorCode": 0,
[2025-11-26 07:40:17]     "pilotErrorDiag": "",
[2025-11-26 07:40:17]  *** Listing of results directory ***
[2025-11-26 07:40:17] total 1311556
[2025-11-26 07:40:17] -rw-r--r--. 1 boincer umatlas    576529 Nov 23 05:16 pilot3.tar.gz
[2025-11-26 07:40:17] -rwx------. 1 boincer umatlas     36292 Nov 23 05:32 runpilot2-wrapper.sh
[2025-11-26 07:40:17] -rw-r--r--. 1 boincer umatlas      5112 Nov 23 05:32 queuedata.json
[2025-11-26 07:40:17] -rw-r--r--. 1 boincer umatlas       100 Nov 25 15:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 07:40:17] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 15:55 run_atlas
[2025-11-26 07:40:17] -rw-r--r--. 1 boincer umatlas       105 Nov 25 15:55 job.xml
[2025-11-26 07:40:17] -rw-r--r--. 2 boincer umatlas 408013443 Nov 25 15:55 EVNT.47483658._000691.pool.root.1
[2025-11-26 07:40:17] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 15:55 start_atlas.sh
[2025-11-26 07:40:17] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 15:55 shared
[2025-11-26 07:40:17] -rw-r--r--. 2 boincer umatlas    590097 Nov 25 15:55 input.tar.gz
[2025-11-26 07:40:17] -rw-r--r--. 1 boincer umatlas         0 Nov 25 15:55 boinc_lockfile
[2025-11-26 07:40:17] -rw-r--r--. 1 boincer umatlas      2785 Nov 25 15:55 pandaJob.out
[2025-11-26 07:40:17] -rw-------. 1 boincer umatlas        57 Nov 25 15:55 setup.sh.local
[2025-11-26 07:40:17] -rw-------. 1 boincer umatlas    991893 Nov 25 15:56 agis_schedconf.cvmfs.json
[2025-11-26 07:40:17] drwx------. 5 boincer umatlas      4096 Nov 25 15:56 pilot3
[2025-11-26 07:40:17] -rw-r--r--. 1 boincer umatlas       533 Nov 26 07:30 boinc_task_state.xml
[2025-11-26 07:40:17] -rw-------. 1 boincer umatlas 912478373 Nov 26 07:38 HITS.47556137._006866.pool.root.1
[2025-11-26 07:40:17] -rw-------. 1 boincer umatlas      1057 Nov 26 07:39 memory_monitor_summary.json
[2025-11-26 07:40:17] -rw-------. 1 boincer umatlas   1516240 Nov 26 07:39 agis_ddmendpoints.agis.ALL.json
[2025-11-26 07:40:17] -rw-------. 1 boincer umatlas   2079945 Nov 26 07:39 log.47556137._006866.job.log.tgz.1
[2025-11-26 07:40:17] -rw-------. 1 boincer umatlas      8621 Nov 26 07:39 heartbeat.json
[2025-11-26 07:40:17] -rw-r--r--. 1 boincer umatlas      6846 Nov 26 07:39 init_data.xml
[2025-11-26 07:40:17] -rw-------. 1 boincer umatlas        95 Nov 26 07:39 pilot_heartbeat.json
[2025-11-26 07:40:17] -rw-r--r--. 1 boincer umatlas        29 Nov 26 07:40 wrapper_checkpoint.txt
[2025-11-26 07:40:17] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 07:40 boinc_mmap_file
[2025-11-26 07:40:17] -rw-------. 1 boincer umatlas      4824 Nov 26 07:40 pilotlog.txt
[2025-11-26 07:40:17] -rw-------. 1 boincer umatlas   7229197 Nov 26 07:40 log.47556137._006866.job.log.1
[2025-11-26 07:40:17] -rw-------. 1 boincer umatlas       353 Nov 26 07:40 output.list
[2025-11-26 07:40:17] -rw-r--r--. 1 boincer umatlas       620 Nov 26 07:40 runtime_log
[2025-11-26 07:40:17] -rw-------. 1 boincer umatlas   9328640 Nov 26 07:40 result.tar.gz
[2025-11-26 07:40:17] -rw-------. 1 boincer umatlas       661 Nov 26 07:40 tnGMDmzZMh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmunKKDmS8gqzm.diag
[2025-11-26 07:40:17] -rw-r--r--. 1 boincer umatlas      9348 Nov 26 07:40 runtime_log.err
[2025-11-26 07:40:17] -rw-r--r--. 1 boincer umatlas     21386 Nov 26 07:40 stderr.txt
[2025-11-26 07:40:17] HITS file was successfully produced:
[2025-11-26 07:40:17] -rw-------. 1 boincer umatlas 912478373 Nov 26 07:38 shared/HITS.pool.root.1
[2025-11-26 07:40:17]  *** Contents of shared directory: ***
[2025-11-26 07:40:17] total 1299264
[2025-11-26 07:40:17] -rw-r--r--. 2 boincer umatlas 408013443 Nov 25 15:55 ATLAS.root_0
[2025-11-26 07:40:17] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 15:55 start_atlas.sh
[2025-11-26 07:40:17] -rw-r--r--. 2 boincer umatlas    590097 Nov 25 15:55 input.tar.gz
[2025-11-26 07:40:17] -rw-------. 1 boincer umatlas 912478373 Nov 26 07:38 HITS.pool.root.1
[2025-11-26 07:40:17] -rw-------. 1 boincer umatlas   9328640 Nov 26 07:40 result.tar.gz
07:40:18 (1406046): run_atlas exited; CPU time 234780.718905
07:40:18 (1406046): called boinc_finish(0)

</stderr_txt>
]]>

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